View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14784_low_29 (Length: 409)

Name: NF14784_low_29
Description: NF14784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14784_low_29
NF14784_low_29
[»] chr8 (51 HSPs)
chr8 (219-409)||(7689712-7689902)
chr8 (220-409)||(43851665-43851853)
chr8 (219-409)||(10108559-10108749)
chr8 (219-409)||(14820483-14820673)
chr8 (219-409)||(21147935-21148126)
chr8 (231-409)||(30789519-30789696)
chr8 (218-409)||(17622888-17623076)
chr8 (290-409)||(26532853-26532972)
chr8 (231-409)||(5555058-5555236)
chr8 (219-406)||(26136877-26137063)
chr8 (218-409)||(42605942-42606133)
chr8 (298-409)||(22494573-22494684)
chr8 (231-409)||(42112996-42113173)
chr8 (219-363)||(10108369-10108513)
chr8 (290-409)||(14767577-14767696)
chr8 (217-363)||(5554866-5555012)
chr8 (218-409)||(2583509-2583701)
chr8 (220-363)||(14820295-14820437)
chr8 (217-358)||(10171383-10171524)
chr8 (219-362)||(30789743-30789886)
chr8 (314-409)||(43481408-43481503)
chr8 (219-363)||(21148171-21148315)
chr8 (219-276)||(42113303-42113360)
chr8 (220-363)||(2583320-2583463)
chr8 (217-335)||(7689521-7689638)
chr8 (238-363)||(21144740-21144865)
chr8 (219-363)||(26136684-26136828)
chr8 (223-363)||(17623122-17623261)
chr8 (220-272)||(18044153-18044205)
chr8 (224-363)||(42605759-42605896)
chr8 (219-363)||(43481549-43481694)
chr8 (301-409)||(22848399-22848507)
chr8 (217-276)||(35367407-35367466)
chr8 (290-363)||(22494455-22494527)
chr8 (219-275)||(40486628-40486684)
chr8 (298-338)||(43851820-43851860)
chr8 (217-276)||(1949649-1949708)
chr8 (219-274)||(20877069-20877124)
chr8 (375-409)||(30789592-30789626)
chr8 (290-363)||(14767742-14767815)
chr8 (298-338)||(7689705-7689745)
chr8 (290-356)||(38726757-38726823)
chr8 (217-276)||(40487736-40487795)
chr8 (376-409)||(7689783-7689816)
chr8 (298-335)||(42113247-42113284)
chr8 (376-409)||(43851749-43851782)
chr8 (375-407)||(8104752-8104784)
chr8 (298-338)||(10108552-10108592)
chr8 (217-273)||(14767503-14767559)
chr8 (220-276)||(14767826-14767882)
chr8 (298-338)||(17623043-17623083)
[»] chr7 (52 HSPs)
chr7 (217-409)||(12006538-12006729)
chr7 (217-409)||(23704850-23705041)
chr7 (217-409)||(20458689-20458880)
chr7 (217-409)||(48672274-48672468)
chr7 (220-409)||(20419536-20419725)
chr7 (220-409)||(41599958-41600147)
chr7 (219-409)||(10409563-10409752)
chr7 (219-409)||(25772363-25772552)
chr7 (220-409)||(38879723-38879913)
chr7 (221-409)||(44816832-44817024)
chr7 (220-409)||(23383499-23383689)
chr7 (219-362)||(28218177-28218321)
chr7 (220-409)||(20963494-20963684)
chr7 (221-409)||(48648263-48648450)
chr7 (303-409)||(31851322-31851428)
chr7 (254-409)||(24194980-24195140)
chr7 (218-362)||(28218399-28218543)
chr7 (219-362)||(41600194-41600337)
chr7 (220-362)||(16995200-16995341)
chr7 (217-362)||(12006776-12006921)
chr7 (303-409)||(33162724-33162830)
chr7 (218-362)||(48672515-48672659)
chr7 (305-409)||(1250291-1250395)
chr7 (218-363)||(23383735-23383880)
chr7 (231-363)||(1250441-1250573)
chr7 (220-335)||(20419799-20419915)
chr7 (217-363)||(25772566-25772712)
chr7 (223-409)||(7657972-7658159)
chr7 (218-328)||(20963764-20963873)
chr7 (220-335)||(23704662-23704776)
chr7 (218-335)||(20458954-20459070)
chr7 (220-363)||(38879959-38880099)
chr7 (221-276)||(7658287-7658342)
chr7 (220-363)||(6465855-6465997)
chr7 (219-271)||(31852157-31852209)
chr7 (290-363)||(31851474-31851547)
chr7 (220-272)||(24195198-24195250)
chr7 (219-272)||(33162862-33162915)
chr7 (291-363)||(7658204-7658276)
chr7 (298-338)||(20419692-20419732)
chr7 (298-338)||(20963651-20963691)
chr7 (298-338)||(41600114-41600154)
chr7 (233-276)||(14646972-14647015)
chr7 (219-268)||(8994201-8994250)
chr7 (376-409)||(12006625-12006658)
chr7 (231-276)||(23258246-23258291)
chr7 (222-271)||(48648554-48648603)
chr7 (376-409)||(48672364-48672397)
chr7 (298-338)||(10409556-10409596)
chr7 (302-338)||(12006696-12006732)
chr7 (298-338)||(23704843-23704883)
chr7 (298-338)||(48672435-48672475)
[»] chr5 (41 HSPs)
chr5 (218-409)||(24837167-24837358)
chr5 (217-409)||(14144090-14144282)
chr5 (220-409)||(23979091-23979279)
chr5 (225-409)||(7125923-7126106)
chr5 (219-409)||(6817122-6817311)
chr5 (220-409)||(18336645-18336833)
chr5 (221-405)||(993751-993932)
chr5 (218-409)||(4918987-4919179)
chr5 (217-409)||(17762471-17762663)
chr5 (222-409)||(24650704-24650889)
chr5 (220-409)||(31799640-31799829)
chr5 (234-409)||(41001370-41001542)
chr5 (217-409)||(14411854-14412046)
chr5 (254-409)||(24074491-24074646)
chr5 (298-409)||(20709290-20709401)
chr5 (219-377)||(30512287-30512444)
chr5 (219-377)||(30552627-30552784)
chr5 (219-363)||(14143901-14144044)
chr5 (219-409)||(27158990-27159178)
chr5 (217-363)||(7126152-7126298)
chr5 (231-409)||(29444995-29445172)
chr5 (217-363)||(24074300-24074446)
chr5 (217-363)||(14411694-14411840)
chr5 (218-363)||(24650934-24651079)
chr5 (219-363)||(17762282-17762425)
chr5 (220-363)||(24837404-24837547)
chr5 (231-363)||(29444817-29444949)
chr5 (218-363)||(31799875-31800019)
chr5 (220-363)||(18336467-18336611)
chr5 (221-335)||(41001616-41001729)
chr5 (219-327)||(20709483-20709590)
chr5 (221-335)||(4919253-4919366)
chr5 (225-363)||(27159192-27159327)
chr5 (233-409)||(22571090-22571266)
chr5 (290-363)||(6817356-6817429)
chr5 (220-335)||(994009-994123)
chr5 (298-338)||(24837325-24837365)
chr5 (295-338)||(18336635-18336678)
chr5 (290-359)||(20959330-20959399)
chr5 (298-359)||(41424594-41424655)
chr5 (298-338)||(7126073-7126113)
[»] chr3 (69 HSPs)
chr3 (219-409)||(9266974-9267164)
chr3 (217-409)||(16722180-16722372)
chr3 (219-409)||(14171586-14171775)
chr3 (217-409)||(45003685-45003876)
chr3 (218-409)||(19112762-19112954)
chr3 (217-409)||(35995675-35995867)
chr3 (231-409)||(14262047-14262225)
chr3 (219-409)||(30500042-30500230)
chr3 (217-409)||(21633085-21633277)
chr3 (219-409)||(20853694-20853885)
chr3 (218-409)||(33372595-33372784)
chr3 (217-409)||(17465364-17465557)
chr3 (220-409)||(4204709-4204897)
chr3 (220-409)||(14162060-14162248)
chr3 (218-409)||(49986717-49986908)
chr3 (220-409)||(5800794-5800982)
chr3 (219-409)||(45970104-45970295)
chr3 (217-409)||(43572580-43572771)
chr3 (290-409)||(38283739-38283858)
chr3 (290-409)||(52552762-52552881)
chr3 (290-409)||(15328649-15328768)
chr3 (303-409)||(47575356-47575461)
chr3 (219-363)||(14262271-14262415)
chr3 (220-363)||(5800605-5800748)
chr3 (221-363)||(52552923-52553065)
chr3 (217-362)||(14171822-14171967)
chr3 (220-363)||(14161871-14162014)
chr3 (220-363)||(19113000-19113143)
chr3 (217-335)||(43572386-43572504)
chr3 (217-362)||(33372403-33372548)
chr3 (219-363)||(30500276-30500419)
chr3 (219-363)||(45969914-45970058)
chr3 (217-363)||(38283547-38283693)
chr3 (219-363)||(16721990-16722134)
chr3 (220-320)||(19720333-19720433)
chr3 (219-276)||(35995997-35996054)
chr3 (217-335)||(20853959-20854076)
chr3 (219-328)||(11003731-11003840)
chr3 (219-363)||(21632900-21633039)
chr3 (219-276)||(27946187-27946244)
chr3 (217-328)||(49986524-49986636)
chr3 (220-359)||(45003496-45003635)
chr3 (217-276)||(9267296-9267355)
chr3 (225-276)||(27946114-27946165)
chr3 (232-360)||(35740829-35740955)
chr3 (218-273)||(3425973-3426028)
chr3 (218-360)||(36990898-36991039)
chr3 (218-360)||(37016338-37016479)
chr3 (299-338)||(45003679-45003718)
chr3 (218-363)||(17649245-17649389)
chr3 (219-276)||(3424773-3424830)
chr3 (290-363)||(15328530-15328603)
chr3 (219-276)||(35741906-35741963)
chr3 (307-363)||(4204943-4204999)
chr3 (219-275)||(24490242-24490298)
chr3 (302-338)||(33372592-33372628)
chr3 (290-358)||(45058731-45058799)
chr3 (298-338)||(47575428-47575468)
chr3 (298-361)||(32998371-32998434)
chr3 (290-363)||(9267210-9267283)
chr3 (301-338)||(17465524-17465561)
chr3 (219-268)||(17465697-17465746)
chr3 (290-363)||(47575507-47575580)
chr3 (298-338)||(14171742-14171782)
chr3 (220-276)||(15328463-15328519)
chr3 (217-273)||(15328786-15328842)
chr3 (298-338)||(16722173-16722213)
chr3 (298-338)||(35995834-35995874)
chr3 (298-338)||(49986710-49986750)
[»] chr4 (68 HSPs)
chr4 (75-205)||(30107479-30107609)
chr4 (218-409)||(46046428-46046613)
chr4 (221-409)||(9516611-9516799)
chr4 (219-409)||(38573968-38574157)
chr4 (217-409)||(9396888-9397079)
chr4 (219-409)||(9619168-9619358)
chr4 (220-409)||(26252425-26252615)
chr4 (221-409)||(34063983-34064171)
chr4 (219-409)||(31944139-31944329)
chr4 (220-409)||(31090060-31090250)
chr4 (225-409)||(37012712-37012896)
chr4 (290-407)||(48259942-48260059)
chr4 (218-409)||(3018201-3018390)
chr4 (290-409)||(7819203-7819322)
chr4 (225-409)||(48579871-48580055)
chr4 (220-409)||(3273810-3273996)
chr4 (223-409)||(13131943-13132130)
chr4 (221-409)||(15640904-15641093)
chr4 (292-409)||(4356070-4356187)
chr4 (231-403)||(35376322-35376494)
chr4 (291-409)||(18667478-18667596)
chr4 (219-362)||(46046660-46046802)
chr4 (223-363)||(3018014-3018155)
chr4 (290-409)||(18713149-18713268)
chr4 (13-75)||(30107389-30107451)
chr4 (217-362)||(38574204-38574349)
chr4 (217-363)||(9618977-9619123)
chr4 (219-363)||(37012942-37013085)
chr4 (223-363)||(9396702-9396842)
chr4 (217-328)||(31943947-31944058)
chr4 (231-363)||(15640727-15640858)
chr4 (218-276)||(31218303-31218361)
chr4 (220-335)||(9516873-9516988)
chr4 (221-363)||(35376164-35376305)
chr4 (217-335)||(3273618-3273737)
chr4 (219-275)||(41946964-41947020)
chr4 (225-335)||(48580129-48580239)
chr4 (218-363)||(13132176-13132319)
chr4 (219-335)||(31090324-31090440)
chr4 (219-276)||(48259822-48259879)
chr4 (290-363)||(4355951-4356024)
chr4 (219-347)||(12904746-12904873)
chr4 (290-363)||(18713030-18713103)
chr4 (290-363)||(26252338-26252411)
chr4 (290-363)||(34064217-34064290)
chr4 (217-328)||(7819012-7819122)
chr4 (220-272)||(41947180-41947232)
chr4 (219-276)||(18667612-18667669)
chr4 (219-276)||(36887679-36887736)
chr4 (307-360)||(50462634-50462687)
chr4 (298-338)||(46046580-46046620)
chr4 (232-272)||(46934083-46934123)
chr4 (299-338)||(9396882-9396921)
chr4 (298-361)||(36888917-36888980)
chr4 (375-409)||(3273879-3273913)
chr4 (375-409)||(13132026-13132060)
chr4 (218-276)||(20069620-20069678)
chr4 (218-271)||(7819347-7819400)
chr4 (219-276)||(12904906-12904963)
chr4 (231-276)||(51029095-51029140)
chr4 (219-276)||(53896445-53896502)
chr4 (298-338)||(7819196-7819236)
chr4 (298-338)||(9516766-9516806)
chr4 (302-338)||(38574124-38574160)
chr4 (290-334)||(41947120-41947164)
chr4 (232-276)||(43313533-43313577)
chr4 (298-338)||(48259933-48259973)
chr4 (217-261)||(50462733-50462777)
[»] chr2 (53 HSPs)
chr2 (220-409)||(23806141-23806330)
chr2 (220-409)||(15106256-15106443)
chr2 (217-409)||(26560553-26560743)
chr2 (220-409)||(17850587-17850775)
chr2 (219-409)||(17463280-17463470)
chr2 (219-409)||(26236284-26236473)
chr2 (220-409)||(22263192-22263380)
chr2 (217-409)||(19251659-19251850)
chr2 (217-409)||(20498934-20499126)
chr2 (231-409)||(30390470-30390648)
chr2 (220-409)||(26136006-26136195)
chr2 (220-409)||(42670717-42670908)
chr2 (294-409)||(39878291-39878406)
chr2 (298-409)||(13284486-13284597)
chr2 (219-362)||(17850822-17850965)
chr2 (231-396)||(13254638-13254803)
chr2 (219-409)||(33290238-33290426)
chr2 (219-356)||(19251470-19251606)
chr2 (220-328)||(23854688-23854796)
chr2 (219-363)||(22263426-22263572)
chr2 (220-363)||(42670954-42671097)
chr2 (217-363)||(26236124-26236270)
chr2 (230-363)||(26135827-26135960)
chr2 (233-363)||(33290062-33290192)
chr2 (352-409)||(23854798-23854855)
chr2 (220-363)||(17463092-17463234)
chr2 (220-362)||(15106067-15106209)
chr2 (217-363)||(20498744-20498888)
chr2 (219-361)||(30959909-30960050)
chr2 (290-363)||(23854901-23854974)
chr2 (221-363)||(26560789-26560932)
chr2 (290-370)||(36359113-36359193)
chr2 (220-267)||(23855025-23855072)
chr2 (220-359)||(34548574-34548712)
chr2 (217-328)||(13254494-13254605)
chr2 (219-274)||(12419046-12419101)
chr2 (219-274)||(12431106-12431161)
chr2 (218-276)||(23047904-23047962)
chr2 (289-363)||(23806021-23806095)
chr2 (232-363)||(13284643-13284779)
chr2 (218-267)||(23046705-23046754)
chr2 (297-338)||(26236276-26236317)
chr2 (219-276)||(39878102-39878158)
chr2 (298-338)||(15106249-15106289)
chr2 (232-276)||(30958696-30958740)
chr2 (299-338)||(26560710-26560749)
chr2 (220-326)||(44098894-44099000)
chr2 (375-409)||(13284667-13284701)
chr2 (376-409)||(15106327-15106360)
chr2 (289-338)||(22263347-22263396)
chr2 (232-272)||(21481013-21481053)
chr2 (220-276)||(39878395-39878450)
chr2 (222-266)||(44999354-44999398)
[»] chr1 (55 HSPs)
chr1 (219-409)||(39711261-39711451)
chr1 (219-409)||(39826049-39826239)
chr1 (219-409)||(4906961-4907151)
chr1 (219-409)||(17606497-17606685)
chr1 (219-409)||(34749137-34749326)
chr1 (217-409)||(33628687-33628879)
chr1 (217-409)||(48072150-48072342)
chr1 (220-409)||(30299420-30299609)
chr1 (220-409)||(52058011-52058200)
chr1 (239-409)||(42510034-42510203)
chr1 (220-409)||(39970645-39970835)
chr1 (219-409)||(8292993-8293187)
chr1 (220-409)||(24467817-24468002)
chr1 (219-409)||(20995858-20996046)
chr1 (302-409)||(7473874-7473981)
chr1 (305-409)||(13229920-13230024)
chr1 (219-406)||(29696755-29696936)
chr1 (231-409)||(43539536-43539714)
chr1 (219-409)||(18462474-18462663)
chr1 (220-363)||(39711074-39711215)
chr1 (220-363)||(8292804-8292947)
chr1 (217-359)||(17606301-17606447)
chr1 (219-363)||(33628925-33629069)
chr1 (220-363)||(4907197-4907340)
chr1 (219-335)||(18462285-18462400)
chr1 (219-335)||(24467628-24467743)
chr1 (220-363)||(34749340-34749483)
chr1 (220-328)||(39826316-39826424)
chr1 (218-344)||(30252152-30252280)
chr1 (218-327)||(29696563-29696671)
chr1 (220-363)||(39970880-39971024)
chr1 (219-335)||(52058271-52058387)
chr1 (219-328)||(30299231-30299339)
chr1 (220-356)||(18342261-18342395)
chr1 (231-363)||(48071972-48072104)
chr1 (218-276)||(20995696-20995754)
chr1 (222-363)||(43539349-43539490)
chr1 (290-363)||(16294182-16294255)
chr1 (306-359)||(30780303-30780356)
chr1 (217-272)||(27039635-27039690)
chr1 (299-338)||(39826206-39826245)
chr1 (232-361)||(17501967-17502095)
chr1 (298-363)||(20995747-20995812)
chr1 (232-272)||(42510341-42510381)
chr1 (220-271)||(13230059-13230110)
chr1 (233-276)||(17500782-17500825)
chr1 (231-274)||(37236729-37236772)
chr1 (300-363)||(42510249-42510312)
chr1 (217-276)||(43400750-43400809)
chr1 (352-409)||(215044-215101)
chr1 (376-409)||(39826135-39826168)
chr1 (303-331)||(13229815-13229843)
chr1 (298-338)||(17606490-17606530)
chr1 (294-338)||(20995847-20995891)
chr1 (298-338)||(42510170-42510210)
[»] scaffold0361 (3 HSPs)
scaffold0361 (217-409)||(4752-4943)
scaffold0361 (219-363)||(4561-4706)
scaffold0361 (298-338)||(4745-4785)
[»] chr6 (32 HSPs)
chr6 (220-409)||(26385278-26385467)
chr6 (219-402)||(18500314-18500496)
chr6 (219-409)||(24732127-24732316)
chr6 (223-409)||(33714486-33714676)
chr6 (298-409)||(33637716-33637828)
chr6 (290-409)||(30618150-30618269)
chr6 (303-409)||(32017619-32017725)
chr6 (220-363)||(9481182-9481325)
chr6 (224-409)||(10321737-10321920)
chr6 (223-409)||(30458903-30459090)
chr6 (298-409)||(2299389-2299499)
chr6 (290-409)||(9481371-9481490)
chr6 (290-409)||(14680952-14681071)
chr6 (219-363)||(32017739-32017882)
chr6 (219-369)||(9854116-9854264)
chr6 (218-276)||(24731933-24731991)
chr6 (223-328)||(26385544-26385649)
chr6 (219-363)||(30617966-30618105)
chr6 (221-335)||(19284130-19284244)
chr6 (218-272)||(18500655-18500709)
chr6 (349-409)||(3229992-3230052)
chr6 (217-276)||(2299635-2299694)
chr6 (290-363)||(2299544-2299617)
chr6 (225-328)||(9154884-9154988)
chr6 (219-276)||(2299339-2299396)
chr6 (298-363)||(10321966-10322031)
chr6 (233-276)||(21069527-21069570)
chr6 (217-271)||(33637844-33637898)
chr6 (290-335)||(24732008-24732053)
chr6 (290-363)||(33637629-33637702)
chr6 (298-338)||(3230019-3230059)
chr6 (298-338)||(26385434-26385474)
[»] scaffold0185 (3 HSPs)
scaffold0185 (217-409)||(3866-4058)
scaffold0185 (302-338)||(4025-4061)
scaffold0185 (303-363)||(4104-4164)
[»] scaffold0141 (2 HSPs)
scaffold0141 (220-409)||(8512-8700)
scaffold0141 (217-273)||(8322-8378)
[»] scaffold0809 (2 HSPs)
scaffold0809 (219-409)||(1599-1785)
scaffold0809 (219-363)||(1410-1553)
[»] scaffold0449 (2 HSPs)
scaffold0449 (221-409)||(7227-7420)
scaffold0449 (219-328)||(7469-7579)
[»] scaffold0477 (2 HSPs)
scaffold0477 (219-394)||(4952-5125)
scaffold0477 (217-272)||(4877-4932)
[»] scaffold0881 (2 HSPs)
scaffold0881 (305-409)||(305-409)
scaffold0881 (219-363)||(454-596)
[»] scaffold0117 (1 HSPs)
scaffold0117 (225-364)||(12216-12355)
[»] scaffold0176 (1 HSPs)
scaffold0176 (217-363)||(15867-16009)
[»] scaffold0352 (3 HSPs)
scaffold0352 (218-335)||(5941-6059)
scaffold0352 (217-274)||(4664-4721)
scaffold0352 (379-409)||(5941-5971)


Alignment Details
Target: chr8 (Bit Score: 128; Significance: 5e-66; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 7689902 - 7689712
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| |||         ||| || |||| ||||||||||||||| |||||    
T  7689902 agggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcagattct 7689803  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7689802 tccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 7689712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 43851665 - 43851853
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||| ||||||||||||||| ||||||    
T  43851665 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaacaaaa-gatttagattttgtccctgtaatttcagattctt 43851763  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  43851764 ccacttttgatccctcattccaccacatcagcagaatctgcatacatgacacgtaaaatgagggatcaaaagtggaggaatatgaaatta 43851853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 10108749 - 10108559
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||| ||||| |||||||||||||||||||||| | |||||||||||||||||||||         ||| ||||||| |||||||||||||||||||||    
T  10108749 agggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 10108650  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  10108649 tccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaatta 10108559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 14820673 - 14820483
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||| ||||| |||||| ||||||||||||||| |||||||||||||||||||||||         ||| ||||||| |||||||||||||||||||||    
T  14820673 agggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 14820574  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||| ||| ||||    
T  14820573 tccacttttggtcccttattccaccacgtcagcagaatctgcatacatgactcgtaaaatgagggaccaaaagtagaggaatttgagatta 14820483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 21147935 - 21148126
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattc 317  Q
    ||||| ||||| |||||| ||||||||||||||| |||||||||||||||||||||||          ||| ||||||| ||||||||||||||| ||||    
T  21147935 agggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 21148034  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||    
T  21148035 ttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggaggaatttgaaatta 21148126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 231 - 409
Target Start/End: Original strand, 30789519 - 30789696
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgat 330  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||         ||| ||||||| ||| ||||||||||| |||| ||||||||||||    
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattttgtctctgtaatttcagattcctccacttttgat 30789617  T
Q  331 ccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||  ||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30789618 ccctcatttcaccacgttagcaaaatctgcatacatggcacgtaagatgagggatcaaaagtggaggaatctgaaatta 30789696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 218 - 409
Target Start/End: Original strand, 17622888 - 17623076
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||||||||| ||||||||||| |||||||||| |||||| | ||||||||||||||         ||| ||||||| || | |||||||| | ||||    
T  17622888 tagggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgtaaaaaaa--gatttagattttgttc-tgtaattttagattc 17622984  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17622985 ttccacttttggtccctcattccaccacgtcagcagaatctgcgtacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaatta 17623076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 290 - 409
Target Start/End: Original strand, 26532853 - 26532972
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaa 389  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  26532853 tagattttgtccctgtaatttcaaatttttccacttttgatccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggattaaa 26532952  T
Q  390 agtggaggaatctgaaatta 409  Q
    ||||||||||||||||||||    
T  26532953 agtggaggaatctgaaatta 26532972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 231 - 409
Target Start/End: Complemental strand, 5555236 - 5555058
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgat 330  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||||         ||| ||||||| ||||||||||||||||||||||||||||||| |    
T  5555236 tcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggt 5555137  T
Q  331 ccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||| |||| |||| ||||||| |||||||||| |||||||||||||||||||| |||||||| ||||||  |||||||    
T  5555136 cccttattccaccatgtcagcaaaatctgcataaatggcacgtaaaatgagggaccaaaagtgaaggaattcgaaatta 5555058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 219 - 406
Target Start/End: Complemental strand, 26137063 - 26136877
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    |||||||||||  |||||||||||||||||||||  ||||| | ||||||||||||            || ||||||| ||||||||||||||| |||||    
T  26137063 agggtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtccctagtaaaaaaaaaat-tagattttgtccctgtaatttcagattct 26136965  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaa 406  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  26136964 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaaatggaggaatctgaaa 26136877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 218 - 409
Target Start/End: Complemental strand, 42606133 - 42605942
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||||||||  |||||| ||||||||||||||| ||||||| ||||||||||  |||         ||| ||||||| ||||| ||||||||| ||||    
T  42606133 tagggtaaatatctctttttgtccctgtaatattagcgaattctggttttagtcaatgtaaaaaaaaagatttagattttgtccccgtaatttcaaattc 42606034  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||| ||| | |||| ||||||| |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  42606033 ttccacttttggtccattattccaccacgtaagcagaatttgcattcatggcacgtaaaatgagggaccaaaagtggaggaatctgaaatta 42605942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 298 - 409
Target Start/End: Complemental strand, 22494684 - 22494573
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggagg 397  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||| |||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  22494684 gtccctgtaatttcaaattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatgacacgtaaaatgagggaccaaaagtggagg 22494585  T
Q  398 aatctgaaatta 409  Q
    ||||||||||||    
T  22494584 aatctgaaatta 22494573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 231 - 409
Target Start/End: Original strand, 42112996 - 42113173
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgat 330  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||         ||| ||||||  ||||||||||||| | |||||| |||||||| |    
T  42112996 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattatgtccctgtaatttaagattctttcacttttggt 42113094  T
Q  331 ccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||  ||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||| ||| ||||||||    
T  42113095 ccctcatttcaccacgtcagcagaatctgcatacatgacacataaaatgagggaccaaaagtggagtaatatgaaatta 42113173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 219 - 363
Target Start/End: Original strand, 10108369 - 10108513
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||| |||||||||||||||||||||    
T  10108369 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 10108468  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||| |||||| ||  | |||||||||||||||||||||    
T  10108469 tccacttttggtccctcctttcatcacgtcagcagaatctgcata 10108513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 290 - 409
Target Start/End: Original strand, 14767577 - 14767696
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaa 389  Q
    ||||||| ||||||||||||||| ||| ||||||||||| ||||| |||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||    
T  14767577 tagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagaccaaa 14767676  T
Q  390 agtggaggaatctgaaatta 409  Q
    ||||||||||| ||||||||    
T  14767677 agtggaggaatttgaaatta 14767696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 217 - 363
Target Start/End: Original strand, 5554866 - 5555012
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||         |||  |||||| |||||| ||||||||||||    
T  5554866 ttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcatatt 5554965  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||||| |||||  ||  | |||||||||||||||||||||    
T  5554966 cttccacttttggtcccttctttcatcacgtcagcagaatctgcata 5555012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 218 - 409
Target Start/End: Complemental strand, 2583701 - 2583509
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatatt 316  Q
    |||||||||||  |||||||||||  ||||||||| |||||||  ||||||| ||||||          ||| || |||| |||||| |||||||| |||    
T  2583701 tagggtaaatatctcttttcgtcctcgtaatattagcgaattctagttttaggccctgtaaaaaaaaaagatttaaattttgtccctataatttcagatt 2583602  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| | |||||||| ||||| ||||| |||||||||||||||||| |||||||||||||  |||||||||||||| ||||||||    
T  2583601 cttccacttttggttcctcattccaccacatcagccgaatctgcatacatggcatgtaaaatgagggactaaaagtggaggaatttgaaatta 2583509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 220 - 363
Target Start/End: Original strand, 14820295 - 14820437
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||         ||| ||||||| ||||||||||||||||||||||    
T  14820295 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattctt 14820393  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||| |||||| ||  | ||| |||||||||||||||||    
T  14820394 ccacttttggtccctcctttcatcacatcagcagaatctgcata 14820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 217 - 358
Target Start/End: Complemental strand, 10171524 - 10171383
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||          || ||||||| ||||||||||||| | |||    
T  10171524 ttagggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagatt 10171425  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatct 358  Q
    ||| |||||||| |||||||||| | || |||||||||||||    
T  10171424 ctttcacttttggtccctcattccatcatgtcagcagaatct 10171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 219 - 362
Target Start/End: Complemental strand, 30789886 - 30789743
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||         ||| ||||||| ||||||||||||||| |||||    
T  30789886 agggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 30789787  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcat 362  Q
    |||||||||| ||| || ||  | |||||||||| |||||||||    
T  30789786 tccacttttggtccatcgtttcatcacgtcagcaaaatctgcat 30789743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 409
Target Start/End: Original strand, 43481408 - 43481503
Alignment:
Q  314 attcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||||| || ||||||| ||||||  || ||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  43481408 attcttccacttttggtctctcattccaccacgcaagtagaatttgcatacatggcacgtaaaacgagggatcaaaagtggaggaatctaaaatta 43481503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 219 - 363
Target Start/End: Complemental strand, 21148315 - 21148171
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||| |||||||||||  ||||||||||||||||||||||          |  ||||||| |||| ||||||||||||||||    
T  21148315 agggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattct 21148216  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||  |||||| ||  | || ||||||||||||||||||    
T  21148215 tccacttttagtccctcctttcatcatgtcagcagaatctgcata 21148171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 42113360 - 42113303
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  42113360 agggtaaatacatcttttcgtccctgtaatattaacgaatttcggttttagttcctgt 42113303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 220 - 363
Target Start/End: Original strand, 2583320 - 2583463
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| ||||||| | |||||||||||| |||||| || ||||||| | |||         ||| ||||||| ||||||||||||||  ||||||    
T  2583320 gggtaaatacctcttttcattcctgtaatattagcgaatttcgattttagttcttgtaaaataaaagatttagattttgtccctgtaatttcggattctt 2583419  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    | |||||||||||||| ||  | |||||||||||||||||||||    
T  2583420 ctacttttgatccctcctttcatcacgtcagcagaatctgcata 2583463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 335
Target Start/End: Original strand, 7689521 - 7689638
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||| |||         ||| ||||||| |||| |||||||||| |||    
T  7689521 ttagggtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtccttgtaaataaaaagatttagattt-gtccttgtaatttcagatt 7689619  T
Q  317 cttccacttttgatccctc 335  Q
    |||||||||||| ||||||    
T  7689620 cttccacttttggtccctc 7689638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 363
Target Start/End: Complemental strand, 21144865 - 21144740
Alignment:
Q  238 gtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgatccctcat 337  Q
    ||||||||||||||||||||||||| ||||||||||| |          || ||||||| |||| |||||||||| |||| |||| ||||  ||||| ||    
T  21144865 gtccctgtaatattaacgaattccgattttagtccctataaaataaaaaatttagattttgtccttgtaatttcagattcctccatttttcgtcccttat 21144766  T
Q  338 tcaaccacgtcagcagaatctgcata 363  Q
    | ||||||||||||||||||||||||    
T  21144765 ttaaccacgtcagcagaatctgcata 21144740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 363
Target Start/End: Original strand, 26136684 - 26136828
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||| ||||| ||||||||| |||||||||||| |||||||| ||||||||||||||          || ||||||| |||| |||||||||| |||||    
T  26136684 agggtgaatacctcttttcgttcctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaaatttagattttgtccttgtaatttcagattct 26136783  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||| ||||||| |||| ||  | || ||||||| ||||||||||    
T  26136784 tccaattttgattcctcctttcatcaagtcagcataatctgcata 26136828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 223 - 363
Target Start/End: Complemental strand, 17623261 - 17623122
Alignment:
Q  223 taaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttcca 322  Q
    ||||||| ||||||| |||||||||||||| | ||||| ||||||||| |||||         ||| ||||||| |||| |||||||||| |||||||||    
T  17623261 taaatacctcttttcatccctgtaatattagccaattctggttttagtgcctgtaaaaaaaa-gatttagattttgtccttgtaatttcaaattcttcca 17623163  T
Q  323 cttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||| || ||| ||  | |||||||||||||||||||||    
T  17623162 cttttggtcactcctttcatcacgtcagcagaatctgcata 17623122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 18044205 - 18044153
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtcc 272  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  18044205 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 18044153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 363
Target Start/End: Original strand, 42605759 - 42605896
Alignment:
Q  224 aaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccac 323  Q
    |||||| ||||||||||| |||||||||||||||||||| |||||||  ||||          || |||||||  |||||||||||||||||||||||||    
T  42605759 aaatacttcttttcgtccatgtaatattaacgaattccgattttagtttctgtaaaaaaaaa-at-tagattttatccctgtaatttcatattcttccac 42605856  T
Q  324 ttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||| |||||| || || |||||||| ||||| ||||||    
T  42605857 ttttggtccctcctttaatcacgtcagtagaatatgcata 42605896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 363
Target Start/End: Complemental strand, 43481694 - 43481549
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt-nnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    ||||||||||  |||||||||| ||||||||||| |||||||||||||||||| ||||          ||| || |||| ||||||||||||||| ||||    
T  43481694 agggtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaattttgtccctgtaatttcaaattc 43481595  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| ||| ||  || || || |||||||||| ||||||||||    
T  43481594 ttccactcttggtctttcctttaatcacgtcagcacaatctgcata 43481549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 409
Target Start/End: Original strand, 22848399 - 22848507
Alignment:
Q  301 cctgtaatttcatattcttccacttttgatccctcatt-caaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaa 399  Q
    |||||||||||| |||||| || ||||| |||||| || || ||||||||  |||||||||||| ||||||||| |||||| |||| |||| ||||||||    
T  22848399 cctgtaatttcagattctttcatttttggtccctcgtttcacccacgtcaaaagaatctgcataaatggcacgtgaaatga-ggataaaaaatggaggaa 22848497  T
Q  400 tctgaaatta 409  Q
    | ||||||||    
T  22848498 tttgaaatta 22848507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 35367407 - 35367466
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||||||||||| |||||| ||||||| ||||||| ||||||||||||||| |||||||    
T  35367407 ttagggtaaatacctcttttggtccctgcaatattagcgaattccggttttaatccctgt 35367466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 22494455 - 22494527
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| || |||||||||||||||||||||| ||||| ||| || || || |||||||||||||||||||||    
T  22494455 tagattttgttcctgtaatttcatattcttccatttttggtccttc-tttaatcacgtcagcagaatctgcata 22494527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 40486628 - 40486684
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctg 275  Q
    ||||| |||||  ||||| ||||||||||||||||||||||||| ||||||||||||    
T  40486628 agggttaatactacttttggtccctgtaatattaacgaattccgattttagtccctg 40486684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 43851860 - 43851820
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  43851860 gtccctgtaatttcatattcctccacttttgatccctcatt 43851820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 1949649 - 1949708
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||||| ||||| |||||| ||||||||||||| | ||||||||||||||||| |||||    
T  1949649 ttagggttaatacctcttttggtccctgtaatatgatcgaattccggttttagtgcctgt 1949708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 20877124 - 20877069
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccct 274  Q
    ||||| ||||| |||||| ||||||||||||| | |||||||||||||||||||||    
T  20877124 agggttaatacctcttttggtccctgtaatatgagcgaattccggttttagtccct 20877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 409
Target Start/End: Complemental strand, 30789626 - 30789592
Alignment:
Q  375 aaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||||||||||||||||||    
T  30789626 aaatgagggatcaaaagtggaggaatctgaaatta 30789592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 14767815 - 14767742
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| ||||||||||||||||||||||||| |||   |||||| ||  | ||||||| |||||||||||||    
T  14767815 tagattttgtccctgtaatttcatattcttccagtttgtgtccctcttttcatcacgtcaacagaatctgcata 14767742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 7689705 - 7689745
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  7689705 gtccctgtaatttcagattcctccacttttgatccctcatt 7689745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 356
Target Start/End: Original strand, 38726757 - 38726823
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctca-ttcaaccacgtcagcagaat 356  Q
    ||||||| |||| |||||||||| ||||||||||||| ||||||||| || ||||| |||||||||||    
T  38726757 tagattttgtccttgtaatttcagattcttccactttagatccctcacttaaacca-gtcagcagaat 38726823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 40487795 - 40487736
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||||| |||||  ||||| |||| |||||||||| |||||||| ||||||||||||||    
T  40487795 ttagggttaataccacttttggtccttgtaatattagcgaattccagttttagtccctgt 40487736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 376 - 409
Target Start/End: Original strand, 7689783 - 7689816
Alignment:
Q  376 aatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||| |||||||||||||    
T  7689783 aatgagggatcaaaagtggaagaatctgaaatta 7689816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 42113284 - 42113247
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctc 335  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  42113284 gtccctttaatttcaaattcttccacttttgatccctc 42113247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 376 - 409
Target Start/End: Complemental strand, 43851782 - 43851749
Alignment:
Q  376 aatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||| |||||||||||||    
T  43851782 aatgagggatcaaaagtggaagaatctgaaatta 43851749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 407
Target Start/End: Complemental strand, 8104784 - 8104752
Alignment:
Q  375 aaatgagggatcaaaagtggaggaatctgaaat 407  Q
    |||||||||||||||||||||||||||| ||||    
T  8104784 aaatgagggatcaaaagtggaggaatctaaaat 8104752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 10108552 - 10108592
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  10108552 gtccctgtaatttcaaattcctccacttttggtccctcatt 10108592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 14767503 - 14767559
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccc 273  Q
    ||||||| ||||| ||||||| || ||||||||||| ||||||  ||||||||||||    
T  14767503 ttagggttaatacctcttttcatctctgtaatattagcgaattttggttttagtccc 14767559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 14767882 - 14767826
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||||||||| ||||||||| ||||||||||||   |||| || |||||||||||||    
T  14767882 gggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgt 14767826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 17623083 - 17623043
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  17623083 gtccctgtaatttcagattcctccacttttggtccctcatt 17623043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 7e-65; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 217 - 409
Target Start/End: Original strand, 12006538 - 12006729
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||          || ||||||| ||||||||||||||| |||    
T  12006538 ttagggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaat-tagattttgtccctgtaatttcagatt 12006636  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12006637 cttccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 12006729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 23705041 - 23704850
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||         ||| ||||||| |||||||||||||||||||    
T  23705041 ttagggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatatt 23704943  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23704942 cttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaatta 23704850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 217 - 409
Target Start/End: Original strand, 20458689 - 20458880
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||          || ||||||| ||| ||||||||||| |||    
T  20458689 ttagggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataaaaa-atttagattttgtcgctgtaatttcagatt 20458787  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20458788 cttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaatta 20458880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 217 - 409
Target Start/End: Original strand, 48672274 - 48672468
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn--gatctagatttcgtccctgtaatttcata 314  Q
    ||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||| ||||           ||| ||||||||||| ||||||||||| |    
T  48672274 ttagggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgtaaaaaaaaaaagatttagatttcgtctctgtaatttcaga 48672373  T
Q  315 ttcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48672374 ttcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaatta 48672468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 20419536 - 20419725
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||         ||| ||||||| ||||||||||||||||||||||    
T  20419536 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 20419635  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||| ||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  20419636 ccatttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatatgaaatta 20419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 41599958 - 41600147
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| ||||||| |||||||||||||| |||||| |||||||||||| | |          || ||||||| ||||||||||||||| ||||||    
T  41599958 gggtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtccatataaaaaaaaatatttagattttgtccctgtaatttcagattctt 41600057  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41600058 ccacatttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 41600147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 10409752 - 10409563
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| ||||||| ||| |||||||||| ||||||||| |||||||||||||         ||| ||||||| ||| ||||||||| | |||||    
T  10409752 agggtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattttgtctctgtaattttagattct 10409654  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10409653 tccacttttgatccctcattccaccacgttagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaatta 10409563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 25772363 - 25772552
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| |||||| || |||||||  ||||         ||| ||||||| |||| ||||||||||||||||    
T  25772363 agggtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagtttctgtaaaaaaaa-gatttagattttgtccttgtaatttcatattct 25772461  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  25772462 tccacttttgttccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaatta 25772552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 38879723 - 38879913
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattct 318  Q
    |||||||||| |||||||||||||||||||||| ||||||||  ||||||| |||||          ||| ||||||| |||||||||||||||||||||    
T  38879723 gggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 38879822  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||||||||| ||||  ||||||||||||||||||    
T  38879823 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacataaaatgagggaccaaatttggaggaatctgaaatta 38879913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 221 - 409
Target Start/End: Original strand, 44816832 - 44817024
Alignment:
Q  221 ggtaaatacatcttttc--gtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn--gatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||| |||||||  ||||||||||||||| |||||| ||||||||||| ||||           ||| | ||||| ||||||||||||||| |||    
T  44816832 ggtaaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaaaagattttgattttgtccctgtaatttcagatt 44816931  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44816932 cttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaatta 44817024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 23383499 - 23383689
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattct 318  Q
    |||||||||| |||||||||| |||||||||||  |||||||||||||||||||| |          ||| ||||||| |||||| ||||||||||||||    
T  23383499 gggtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcatattct 23383598  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||| ||||  |||||||||| ||||||| ||||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||||    
T  23383599 tccattttttgtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgaaggaatttgaaatta 23383689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 219 - 362
Target Start/End: Original strand, 28218177 - 28218321
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattc 317  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||          ||| ||||||| ||||||||||||||| ||||    
T  28218177 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 28218276  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcat 362  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  28218277 ttccacttttggtccctcattccaccacgtcagcagaatctgcat 28218321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 20963494 - 20963684
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattct 318  Q
    |||||||||  | ||||||||||||||||||||  ||||||  ||||||||||||||          ||| ||||||| ||||||||||||| | |||||    
T  20963494 gggtaaatatctattttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaaaagatttagatttagtccctgtaattttagattct 20963593  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| ||||||||||  |||| | |||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||    
T  20963594 tccacttttggtccctcattccgccacataagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaagaatatgaaatta 20963684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 221 - 409
Target Start/End: Original strand, 48648263 - 48648450
Alignment:
Q  221 ggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttc 320  Q
    ||||||||  |||||||||||||||||||| | |||||| || ||||||||| |||         ||| ||||||| ||||||||||||||| ||| ||     
T  48648263 ggtaaatatctcttttcgtccctgtaatatcagcgaatttcgattttagtccatgtaagaaaaa-gatttagattttgtccctgtaatttcagatttttt 48648361  T
Q  321 cacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    || ||||| |||||||||| ||||||| || |||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||    
T  48648362 catttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaaggagggaccaaaattggaggaatctgaaatta 48648450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 303 - 409
Target Start/End: Original strand, 31851322 - 31851428
Alignment:
Q  303 tgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatct 402  Q
    |||||||||||||| |||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |    
T  31851322 tgtaatttcatatttttccacttttgatctctcttttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagaaatat 31851421  T
Q  403 gaaatta 409  Q
    |||||||    
T  31851422 gaaatta 31851428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 254 - 409
Target Start/End: Complemental strand, 24195140 - 24194980
Alignment:
Q  254 cgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcag 353  Q
    |||| ||||||||||||||||||         ||| ||||||| |||| |||||||||||||||||||||||||| |||||||||| | ||||| |||||    
T  24195140 cgaaatccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtccctcattccatcacgtaagcag 24195041  T
Q  354 aatctgcatacatggcacgtaaa-----atgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||||  |||||||     |||||||| ||||||||||||||||||||||||    
T  24195040 aatctgcatacatgatacgtaaaatgaaatgagggaccaaaagtggaggaatctgaaatta 24194980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 218 - 362
Target Start/End: Complemental strand, 28218543 - 28218399
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||| ||||||||||||||| ||||    
T  28218543 tagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 28218444  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcat 362  Q
    ||||||||||| |||||| ||  | ||||||| || |||||||||    
T  28218443 ttccacttttggtccctcctttcatcacgtcaacaaaatctgcat 28218399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 219 - 362
Target Start/End: Complemental strand, 41600337 - 41600194
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||         ||| ||||||| ||||||||||||||| |||||    
T  41600337 agggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 41600238  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcat 362  Q
    |||||||||| |||||| ||  | |||||||||| |||||||||    
T  41600237 tccacttttggtccctcctttcatcacgtcagcaaaatctgcat 41600194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 220 - 362
Target Start/End: Original strand, 16995200 - 16995341
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||||||| ||||||||||| |||||| |||||||||| |||||          || ||||||| ||||||||||||||| ||||||    
T  16995200 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaat-atttagattttgtccctgtaatttcagattctt 16995298  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcat 362  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||    
T  16995299 ccacttttggtcccacattccaccacgtcagcagaatctgcat 16995341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 217 - 362
Target Start/End: Complemental strand, 12006921 - 12006776
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| ||||||||| | |||||||||| ||||||||| |||||||||||||         ||| ||||||| ||||||||||||||| |||    
T  12006921 ttagggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagatt 12006822  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcat 362  Q
    |||||||||||| |||||| ||  | |||||||||| |||||||||    
T  12006821 cttccacttttggtccctcctttcatcacgtcagcaaaatctgcat 12006776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 303 - 409
Target Start/End: Complemental strand, 33162830 - 33162724
Alignment:
Q  303 tgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatct 402  Q
    |||||||||| ||||||||||||||  ||  |||||  ||||||||||||||||||||||||||||||| |||||||||||| |||||||| || |||||    
T  33162830 tgtaatttcaaattcttccacttttagtctttcatttcaccacgtcagcagaatctgcatacatggcacataaaatgagggaccaaaagtgaagtaatct 33162731  T
Q  403 gaaatta 409  Q
    |||||||    
T  33162730 gaaatta 33162724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 362
Target Start/End: Complemental strand, 48672659 - 48672515
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||||||||| |||||||||| ||||||||||| |||||| ||||||||||||||||         ||| |||||||  |||||||||||||| ||||    
T  48672659 tagggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattc 48672560  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcat 362  Q
    ||||||||||| |||||| ||  | ||||| |||| |||||||||    
T  48672559 ttccacttttggtccctcctttcatcacgttagcaaaatctgcat 48672515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 409
Target Start/End: Original strand, 1250291 - 1250395
Alignment:
Q  305 taatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctga 404  Q
    |||||| | ||||||||||||||| || ||||||| ||||||||||| ||||||||||||||| || ||||||||| |||| |||||||||||||| ||     
T  1250291 taattttagattcttccacttttggtctctcattccaccacgtcagctgaatctgcatacatgtcatgtaaaatgaaggattaaaagtggaggaatatgg 1250390  T
Q  405 aatta 409  Q
    |||||    
T  1250391 aatta 1250395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 23383880 - 23383735
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||||||||| ||||||||||||||||||||||  |||||| | ||||||||||||          ||| ||||||| ||||||||||||||||||||    
T  23383880 tagggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattc 23383781  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||| |||| |||||| ||  | || |||| |||||||||||||    
T  23383780 ttccacctttggtccctcctttcatcaagtcaacagaatctgcata 23383735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 231 - 363
Target Start/End: Complemental strand, 1250573 - 1250441
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgat 330  Q
    ||||||||||| |||||||||| |||||||| ||||||||| ||||         ||| ||||||| |||||| |||||||||||||||||||||||| |    
T  1250573 tcttttcgtccttgtaatattagcgaattccagttttagtctctgtaaactaaaagatttagattttgtccctttaatttcatattcttccacttttggt 1250474  T
Q  331 ccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||| ||  | |||||||| ||||||||||||    
T  1250473 ccctcctttcatcacgtcagaagaatctgcata 1250441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 220 - 335
Target Start/End: Complemental strand, 20419915 - 20419799
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt-nnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||          ||| ||||||| ||||||||||||||| |||||    
T  20419915 gggtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 20419816  T
Q  319 tccacttttgatccctc 335  Q
    || ||||||| ||||||    
T  20419815 tctacttttggtccctc 20419799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 363
Target Start/End: Complemental strand, 25772712 - 25772566
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||  ||||||||||||| ||||||||  ||||||| ||||||||||||||         ||| ||||||| ||||||||||||||| |||    
T  25772712 ttagggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagatt 25772613  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||| ||||||| |||||| ||  | || |||| |||||||||||||    
T  25772612 cttctacttttggtccctcctttcatcaagtcaacagaatctgcata 25772566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 223 - 409
Target Start/End: Original strand, 7657972 - 7658159
Alignment:
Q  223 taaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn--gatctagatttcgtccctgtaatttcatattcttc 320  Q
    ||||||| ||||||||||| |||||||||| |||||| |||||||| |||||||           ||| ||||||  |||| |||||||||| ||||||     
T  7657972 taaatacctcttttcgtccatgtaatattagcgaatttcggttttaatccctgtaaaaaaaaaaagatttagattatgtccatgtaatttcaaattctta 7658071  T
Q  321 cacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||| ||| || ||  | |||||||||| ||||||||| |||| ||||||||||||||||  |||||| || |||||||||||||    
T  7658072 cacttttggtccatcctttcatcacgtcagcaaaatctgcat-catgtcacgtaaaatgagggactaaaagtagatgaatctgaaatta 7658159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 218 - 328
Target Start/End: Complemental strand, 20963873 - 20963764
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||          || ||||||| ||||||||||||||| ||||    
T  20963873 tagggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaataaa-atttagatttagtccctgtaatttcagattc 20963775  T
Q  318 ttccacttttg 328  Q
    || ||||||||    
T  20963774 tttcacttttg 20963764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 220 - 335
Target Start/End: Original strand, 23704662 - 23704776
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||| || ||||         ||| || |||| ||||||||||||||| ||||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgt-aaaaaaaagatttacattttgtccctgtaatttcagattctt 23704760  T
Q  320 ccacttttgatccctc 335  Q
    ||||||||| ||||||    
T  23704761 ccacttttggtccctc 23704776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 335
Target Start/End: Complemental strand, 20459070 - 20458954
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||||||||| ||||||||||||||||||||||  ||||||||| |||||| |||||         ||| ||||||| ||| ||||||||||| ||||    
T  20459070 tagggtaaatacctcttttcgtccctgtaatattagggaattccgg-tttagtacctgtaaaaaaaaagatttagattttgtcactgtaatttcagattc 20458972  T
Q  318 ttccacttttgatccctc 335  Q
    ||||||||||| ||||||    
T  20458971 ttccacttttggtccctc 20458954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 220 - 363
Target Start/End: Complemental strand, 38880099 - 38879959
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||||    |          || ||||||| ||||||||||||||| ||||||    
T  38880099 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtct---ttaaaaaaaaaatttagattttgtccctgtaatttcagattctt 38880003  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||| |||||| ||  |||| |||| |||||||||||||    
T  38880002 ccacttttggtccctcctttcaccaagtcaacagaatctgcata 38879959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 7658342 - 7658287
Alignment:
Q  221 ggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  7658342 ggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtctctgt 7658287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 363
Target Start/End: Original strand, 6465855 - 6465997
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||  | ||||||||| |||||||||| |||||||||||||||||||||||          || ||||||  || | |||||||||| ||||||    
T  6465855 gggtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaat-atttagattatgttcttgtaatttcagattctt 6465953  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||| |||||| ||  | |||||||| ||||||||||||    
T  6465954 ccacttttggtccctcctttcatcacgtcagaagaatctgcata 6465997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 31852209 - 31852157
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtc 271  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  31852209 agggttaatacctcttttcgtccctgtaatattaacgaatttcggttttagtc 31852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 31851547 - 31851474
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| ||||||||||||||||||||||||||||||| || ||| ||  | ||| |||||||||| ||||||    
T  31851547 tagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatcacatcagcagaatatgcata 31851474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 24195250 - 24195198
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtcc 272  Q
    |||||||||| |||||||||||||||||||||| ||||||| | |||||||||    
T  24195250 gggtaaatacctcttttcgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 33162915 - 33162862
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtcc 272  Q
    ||||||||||| |||||||||| ||||||||||| |||||| | ||||||||||    
T  33162915 agggtaaatacctcttttcgtctctgtaatattagcgaatttctgttttagtcc 33162862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 7658276 - 7658204
Alignment:
Q  291 agatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||| ||||||||||||| | ||||||||||||||| || ||| ||  | |||||||||| ||||||||||    
T  7658276 agattttgtccctgtaatttaagattcttccacttttggtctctcctttcatcacgtcagcaaaatctgcata 7658204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 20419732 - 20419692
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  20419732 gtccctgtaatttcatattcctccacttttggtccctcatt 20419692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 20963691 - 20963651
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||| |||||||||||||||||||||||||| |||||||||    
T  20963691 gtccttgtaatttcatattcttccacttttggtccctcatt 20963651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 41600154 - 41600114
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  41600154 gtccctgtaatttcagattcctccacttttgatccctcatt 41600114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 276
Target Start/End: Complemental strand, 14647015 - 14646972
Alignment:
Q  233 ttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||| ||||||||||||| | |||||||||||||||||||||||    
T  14647015 ttttagtccctgtaatatgagcgaattccggttttagtccctgt 14646972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 8994250 - 8994201
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggtttta 268  Q
    ||||||||||||| ||||||| ||| ||||||||||||||| | ||||||    
T  8994250 agggtaaatacattttttcgttcctctaatattaacgaatttcagtttta 8994201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 376 - 409
Target Start/End: Complemental strand, 12006658 - 12006625
Alignment:
Q  376 aatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||| |||||||||||||    
T  12006658 aatgagggatcaaaagtggaagaatctgaaatta 12006625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 23258291 - 23258246
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||||| ||| ||||||||||| |||||||||||||| ||||||||    
T  23258291 tcttttggtctctgtaatattagcgaattccggttttggtccctgt 23258246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 48648603 - 48648554
Alignment:
Q  222 gtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtc 271  Q
    |||||||| |||||||||||| ||||||||| |||||| || ||||||||    
T  48648603 gtaaatacttcttttcgtcccagtaatattagcgaatttcgattttagtc 48648554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 376 - 409
Target Start/End: Complemental strand, 48672397 - 48672364
Alignment:
Q  376 aatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||| |||||||||||||    
T  48672397 aatgagggatcaaaagtggaagaatctgaaatta 48672364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 10409556 - 10409596
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||| |||||||||| |||| ||||||||||||||||||||    
T  10409556 gtccttgtaatttcagattcctccacttttgatccctcatt 10409596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 12006732 - 12006696
Alignment:
Q  302 ctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  12006732 ctgtaatttcagattcctccacttttgatccctcatt 12006696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 23704843 - 23704883
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  23704843 gtccctgtaatttcagattcctccacttttggtccctcatt 23704883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 48672475 - 48672435
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||| |||||||||| |||| ||||||||||||||||||||    
T  48672475 gtccttgtaatttcagattcctccacttttgatccctcatt 48672435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 7e-62; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 218 - 409
Target Start/End: Original strand, 24837167 - 24837358
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||         ||| ||||||| |||| |||||||||||||||    
T  24837167 tagggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattc 24837266  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||| |||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24837267 ttccacttttggtccctcattccaccacgtaagcagaatctgtatacatggtacgtaaaatgagggatcaaaagtggaggaatctgaaatta 24837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 14144282 - 14144090
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||||||||||         ||| ||||||| ||||||||||||||| |||    
T  14144282 ttagggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaatt 14144183  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  14144182 cttccacttttggtcccttattccaccacgtcaccagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaatta 14144090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 220 - 409
Target Start/End: Complemental strand, 23979279 - 23979091
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||| ||||||||||||||| ||||||    
T  23979279 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 23979180  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||| |||||||||||| ||| |||| |||||| ||||||||||||    
T  23979179 ccacttttggtccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatga-ggaccaaacgtggagtaatctgaaatta 23979091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 225 - 409
Target Start/End: Original strand, 7125923 - 7126106
Alignment:
Q  225 aatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccact 324  Q
    ||||| ||||||||| |||||||||||| ||||||||| |||||||||||||         ||| ||||||| |||||| |||||||| |||||||||||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattttgtccctataatttcagattcttccact 7126021  T
Q  325 tttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  7126022 tttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaatta 7126106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 6817122 - 6817311
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||         ||| ||||||  |||| |||||||||| |||||    
T  6817122 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaa-gatttagattatgtccatgtaatttcagattct 6817220  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  6817221 tccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaataagggaccaaaaatggaggaatctgaaatta 6817311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 220 - 409
Target Start/End: Complemental strand, 18336833 - 18336645
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||         ||| ||||||| ||||||||||||||| ||||||    
T  18336833 gggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 18336735  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||||| |||  |||| || |||||||| || ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  18336734 ccacttttgatcccttattacaccatgtaagcagaatttgtatacatgtcacgtaaaatgagggaccaaaagtggaggaatctgaaatta 18336645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 221 - 405
Target Start/End: Original strand, 993751 - 993932
Alignment:
Q  221 ggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttc 320  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||          || ||||||| |||| ||||||||||||||||||    
T  993751 ggtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaa--at-tagatttagtccttgtaatttcatattcttc 993847  T
Q  321 cacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaa 405  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  993848 cacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatgaa 993932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 218 - 409
Target Start/End: Original strand, 4918987 - 4919179
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatatt 316  Q
    |||||||||||| ||||||| || ||||||||||| |||||| |||||||||| |||||          ||| ||||||| |||||||||||||||||||    
T  4918987 tagggtaaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 4919086  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| |||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  4919087 cttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgagggaccaaaagtggaggaatttgaaatta 4919179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 17762663 - 17762471
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||||         ||| ||||||| |||||  |||||||| |||    
T  17762663 ttagggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataatttcagatt 17762564  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| |||||||||| ||||||| |||||||| ||||||||||| || |||||||||||| ||||||||||||||||| ||||||    
T  17762563 cttccacttttggtccctcattccaccacgtaagcagaatttgcatacatgggacataaaatgagggaccaaaagtggaggaatctaaaatta 17762471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 222 - 409
Target Start/End: Original strand, 24650704 - 24650889
Alignment:
Q  222 gtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttcc 321  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||| ||  |||         ||| ||||||| || |||||||||||||||||||||    
T  24650704 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttaatctatgtaaaaaaa--gatttagattttgttcctgtaatttcatattcttcc 24650801  T
Q  322 acttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||| |  ||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  24650802 acttttggtagctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaaatggaggaatctgaaatta 24650889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 31799640 - 31799829
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||| |||||||||         ||| ||||||| ||||||||||||||| ||||||    
T  31799640 gggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 31799739  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| ||||| |||| ||||||| |||||||| || |||||||||| ||||||||||||| ||||||||||||| | ||||||||    
T  31799740 ccacttttggtcccttattccaccacgtaagcagaatttgtatacatggcatgtaaaatgagggaccaaaagtggaggattttgaaatta 31799829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 234 - 409
Target Start/End: Original strand, 41001370 - 41001542
Alignment:
Q  234 tttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgatccc 333  Q
    ||||||||||||||||||| |||||| ||||||||||||||||          || ||||||| ||||||||||||||||||||||||||||||| |||     
T  41001370 tttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa--at-tagattttgtccctgtaatttcatattcttccacttttggtcct 41001466  T
Q  334 tcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||| |||| || ||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  41001467 tcattccaccatgtaagcagaatctgcatacatggcacgtaaaatgagggactaaaaatggaggaatctgaaatta 41001542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 14412046 - 14411854
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| ||||||| || || ||||||||||||||| ||||||||||||||||          || ||||||| |||| |||||||||| |||    
T  14412046 ttagggtaaatacctcttttcatctctataatattaacgaatttcggttttagtccctgtaaaaaaaaa-atttagattttgtccttgtaatttcagatt 14411948  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagt-ggaggaatctgaaatta 409  Q
    ||||||| |||| |||||||||| ||||||| |||||||||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||    
T  14411947 cttccacgtttggtccctcattccaccacgtaagcagaatctacatacatgacacgtaaaatgagggaccaaaagtgggaggaatctgaaatta 14411854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 254 - 409
Target Start/End: Complemental strand, 24074646 - 24074491
Alignment:
Q  254 cgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcag 353  Q
    ||||||||||||||| |||||||         ||| ||||||| |||| |||||||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  24074646 cgaattccggttttaatccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtcccttatttaaccacgtcagcag 24074547  T
Q  354 aatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||| ||||||||    
T  24074546 aatctgcatatatggcacgtaaaatgagggaccaaaagtggagaaatttgaaatta 24074491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 298 - 409
Target Start/End: Original strand, 20709290 - 20709401
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggagg 397  Q
    ||||||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  20709290 gtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggacaaaaagtggagg 20709389  T
Q  398 aatctgaaatta 409  Q
    ||| ||||||||    
T  20709390 aatatgaaatta 20709401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 219 - 377
Target Start/End: Original strand, 30512287 - 30512444
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||  ||||||||||||||||||||||  |||||  |||||||||||||||         ||| ||||||| ||||||||||||||| ||| |    
T  30512287 agggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaag-gatttagatttggtccctgtaatttcagatttt 30512385  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaa 377  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  30512386 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaa 30512444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 219 - 377
Target Start/End: Original strand, 30552627 - 30552784
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||  ||||||||||||||||||||||  |||||  |||||||||||||||         ||| ||||||| ||||||||||||||| ||| |    
T  30552627 agggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaag-gatttagatttggtccctgtaatttcagatttt 30552725  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaa 377  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  30552726 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaa 30552784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 219 - 363
Target Start/End: Original strand, 14143901 - 14144044
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||| |||||||||||||||||||||    
T  14143901 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattct 14143999  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||| | |||||||  | |||||||| ||||||||||||    
T  14144000 tccacttttggtacctcatttcatcacgtcagtagaatctgcata 14144044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 27158990 - 27159178
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||| ||||| ||||||||||| |||||||||| |||||| | ||||||||| | ||         ||| || |||| ||||||||||||||| |||||    
T  27158990 agggttaatacctcttttcgtccatgtaatattagcgaatttcagttttagtctcagttaaaaaaa-gatttaaattttgtccctgtaatttcagattct 27159088  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagt-ggaggaatctgaaatta 409  Q
    |||||||||| ||||| |||| |||||||||||| ||||| |||||  |||||||||||||||||||||||||| |||||||||||||||||    
T  27159089 tccacttttggtcccttattccaccacgtcagcaaaatctacatac--ggcacgtaaaatgagggatcaaaagtgggaggaatctgaaatta 27159178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 217 - 363
Target Start/End: Complemental strand, 7126298 - 7126152
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||  |||         ||| ||||||| |||||||||||||||||||    
T  7126298 ttagggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatatt 7126199  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||||| |||||| ||  | |||||||||||||||||||||    
T  7126198 cttccacttttggtccctcctttcatcacgtcagcagaatctgcata 7126152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 231 - 409
Target Start/End: Complemental strand, 29445172 - 29444995
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgat 330  Q
    |||||||||||||||||||||| |||||||| |||||||||| |||         ||| ||||||| |||| |||||||||| ||||||||||||||| |    
T  29445172 tcttttcgtccctgtaatattagcgaattccagttttagtcc-tgtaaaaaaaaagatttagattttgtccttgtaatttcagattcttccacttttggt 29445074  T
Q  331 ccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||| |||| |||||||||| | ||| |||||||||| ||||||||||||||||  |||| || |||||| ||||||||    
T  29445073 cccttattccaccacgtcagtaaaatttgcatacatgacacgtaaaatgagggacaaaaaatgtaggaatttgaaatta 29444995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 217 - 363
Target Start/End: Original strand, 24074300 - 24074446
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| ||||||||||| |||||||||| |||||| ||||||||||||||||          || ||||||| ||| |||||||||||||||    
T  24074300 ttagggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatatt 24074399  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||||| |||||| ||  | |||||||||||||||||||||    
T  24074400 cttccacttttggtccctcctttcatcacgtcagcagaatctgcata 24074446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 217 - 363
Target Start/End: Original strand, 14411694 - 14411840
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||         ||| || |||| |||  |||||||||| |||    
T  14411694 ttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaatttcagatt 14411793  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||||| |||||| ||  | |||||||||||||| ||||||    
T  14411794 cttccacttttggtccctcctttcatcacgtcagcagaatttgcata 14411840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 24651079 - 24650934
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||          ||||||||||  |||||||||||| | ||||    
T  24651079 tagggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccatgtaaaaaagaaaatctagattttatccctgtaattttagattc 24650980  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||||||||||| ||  | ||||||||||||||| |||||    
T  24650979 ttccacttttgatccctcctttcatcacgtcagcagaatccgcata 24650934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 219 - 363
Target Start/End: Original strand, 17762282 - 17762425
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||         ||| || |||| || |||||||||||| |||||    
T  17762282 agggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttatattttgttcctgtaatttcagattct 17762380  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||| |||||| || || ||||| |||||||||||||||    
T  17762381 tccacttttggtccctcctttaatcacgtaagcagaatctgcata 17762425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 220 - 363
Target Start/End: Complemental strand, 24837547 - 24837404
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||         ||| ||||||| ||||||||||||||| ||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 24837448  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    | ||||||| |||||| ||  | || |||| |||||||||||||    
T  24837447 ctacttttgctccctcctttcatcaagtcaacagaatctgcata 24837404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 363
Target Start/End: Original strand, 29444817 - 29444949
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgat 330  Q
    |||||||||||||||||||||||||||||| | |||||||||||||         ||| ||||||  |||| |||||||||||||||||| ||||||| |    
T  29444817 tcttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatattcttctacttttggt 29444916  T
Q  331 ccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||| ||  | |||||||||||||||||||||    
T  29444917 ccctcctttcatcacgtcagcagaatctgcata 29444949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 31800019 - 31799875
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    ||||| |||||| ||||||||||||| |||||||| ||||||||||||||||| |||||         ||| ||||||| |||| |||||||||| ||||    
T  31800019 tagggaaaatacctcttttcgtccctataatattagcgaattccggttttagt-cctgtaaaaaaaaagatttagattttgtccatgtaatttcagattc 31799921  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||| ||||||||||||| ||  | |||||||||||||| ||||||    
T  31799920 ttcctcttttgatccctcctttcatcacgtcagcagaatttgcata 31799875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 363
Target Start/End: Original strand, 18336467 - 18336611
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattct 318  Q
    |||||||||  ||||||||||||| |||||||| ||||||||| |||||||||||||          ||| ||||||| ||||||||||||||| |||||    
T  18336467 gggtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 18336566  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||| ||||||||||||| ||  | ||| |||||||||| ||||||    
T  18336567 tccgcttttgatccctcctttcatcacatcagcagaatttgcata 18336611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 221 - 335
Target Start/End: Complemental strand, 41001729 - 41001616
Alignment:
Q  221 ggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttc 320  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||||| |||         ||| ||||||| |||||| |||||||| |||||||    
T  41001729 ggtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgt-aaaaaaaagatttagattttgtccctataatttcagattcttc 41001631  T
Q  321 cacttttgatccctc 335  Q
    |||||||| ||||||    
T  41001630 cacttttggtccctc 41001616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 20709590 - 20709483
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||| ||||| ||||||||||| |||||||||||||||||  |||||||||||||||         ||| ||||||| |||| ||||||||||||||||    
T  20709590 agggttaatacctcttttcgtccatgtaatattaacgaattttggttttagtccctgt-aaaaaaaagatttagattttgtccatgtaatttcatattct 20709492  T
Q  319 tccactttt 327  Q
    |||||||||    
T  20709491 tccactttt 20709483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 335
Target Start/End: Complemental strand, 4919366 - 4919253
Alignment:
Q  221 ggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttc 320  Q
    ||||||||| |||||||||| ||| ||||||| ||||||||||||||||| |||||          || ||||||| ||||||||||||||| |||||||    
T  4919366 ggtaaatacctcttttcgtctctggaatattagcgaattccggttttagttcctgtaaaaaaaaaaat-tagattttgtccctgtaatttcagattcttc 4919268  T
Q  321 cacttttgatccctc 335  Q
     ||||||||||||||    
T  4919267 tacttttgatccctc 4919253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 363
Target Start/End: Complemental strand, 27159327 - 27159192
Alignment:
Q  225 aatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccact 324  Q
    ||||| ||||||||||| |||||||||| |||||| |||||||||||| |||          || ||||||| ||||||||||||| ||||||||||| |    
T  27159327 aatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaa---atttagattttgtccctgtaattttatattcttccatt 27159231  T
Q  325 tttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||| |||||  ||  | |||||||||||||||||||||    
T  27159230 tttggtcccttctttcatcacgtcagcagaatctgcata 27159192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 409
Target Start/End: Original strand, 22571090 - 22571266
Alignment:
Q  233 ttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgatcc 332  Q
    |||| |||| |||||||||| ||||||||| |||||||||||||          || ||||||   || ||||||||||||||||||||||||||| |||    
T  22571090 tttttgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatttagattatatctctgtaatttcatattcttccacttttggtcc 22571189  T
Q  333 ctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||  |||||||||  ||||| ||  | | ||  |||| |||||||||| |||||| ||| |||| ||||||||    
T  22571190 ctcatttcaccacgtcaaaagaatatgtgtgcgtgatacgtgaaatgagggaccaaaagcggatgaatatgaaatta 22571266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 6817429 - 6817356
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| ||||||||||||||||||||||||||||||| || ||| ||  | ||| |||||||||| ||||||    
T  6817429 tagattttgtccctgtaatttcatattcttccacttttggtcactcctttcatcacatcagcagaatatgcata 6817356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 335
Target Start/End: Complemental strand, 994123 - 994009
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| | |||| ||||| |||||| || |||||| ||||||||||||||||         ||| ||||||| |||||||||||| || ||||||    
T  994123 gggtaaatacctttttt-gtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattctt 994025  T
Q  320 ccacttttgatccctc 335  Q
    ||||||||| ||||||    
T  994024 ccacttttggtccctc 994009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 24837365 - 24837325
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  24837365 gtccctgtaatttcagattcctccacttttgatccctcatt 24837325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 18336635 - 18336678
Alignment:
Q  295 ttcgtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||||||||||||||||| |||| |||||||||| |||||||||    
T  18336635 ttcgtccctgtaatttcagattcctccacttttggtccctcatt 18336678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 359
Target Start/End: Complemental strand, 20959399 - 20959330
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctg 359  Q
    ||||||| ||||||| ||||||| |||| |||||||||| ||  ||||| ||||| || |||||||||||    
T  20959399 tagattttgtccctgcaatttcagattcctccacttttggtcgttcatttaaccatgttagcagaatctg 20959330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 359
Target Start/End: Original strand, 41424594 - 41424655
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctg 359  Q
    |||||||| |||||| ||||||||||||||  ||||||||| || || ||||||| ||||||    
T  41424594 gtccctgtcatttcagattcttccacttttagtccctcatttaaacatgtcagcaaaatctg 41424655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 7126113 - 7126073
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  7126113 gtccctgtaatttcaaattcctccacttttggtccctcatt 7126073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 3e-61; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 9266974 - 9267164
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||| |||||||||||||||||||||    
T  9266974 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 9267073  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||||| | ||||| |||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  9267074 tccacttttggtccctcattccagcacgtaagcagaatctgcatacattgtacgtaaaatgagggaccaaaagtggaggaatctgaaatta 9267164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 16722372 - 16722180
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| |||||||||||||||||||||| |||||| | ||||||||||||||         ||| ||||||| |||||||||||||||||||    
T  16722372 ttagggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatatt 16722273  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| ||||| |||| |||| || ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  16722272 cttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaatta 16722180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 14171586 - 14171775
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    |||||||||||  ||||||||||||||||||||| ||||||||| ||||| |  ||||         ||| ||||||| ||||||||||||||| |||||    
T  14171586 agggtaaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgtaaaaaaaa-gatttagattttgtccctgtaatttcaaattct 14171684  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14171685 tccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaaatggaggaatctgaaatta 14171775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 45003876 - 45003685
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    |||||||||||| ||| ||||||||||||||||||| |||||| |||||||||| |||||         ||| ||||||| |||||| ||||||||||||    
T  45003876 ttagggtaaatatatcgtttcgtccctgtaatattagcgaatttcggttttagttcctgtaaaaaaaa-gatttagatttagtccctataatttcatatt 45003778  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  45003777 cttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatatgaaatta 45003685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 218 - 409
Target Start/End: Original strand, 19112762 - 19112954
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatatt 316  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||          ||| ||||||| ||||||| |||||||||||    
T  19112762 tagggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatatt 19112861  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| ||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  19112862 cttccacttttggtcccttattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggagaaatctgaaatta 19112954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 217 - 409
Target Start/End: Original strand, 35995675 - 35995867
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||           | ||||||| ||||||||||||||| |||    
T  35995675 ttagggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagatt 35995774  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||  ||||||||    
T  35995775 cttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaacatgaaatta 35995867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 231 - 409
Target Start/End: Original strand, 14262047 - 14262225
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgat 330  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||          || ||||||| ||||||||||||||| ||||||||||||||| |    
T  14262047 tcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattcttccacttttggt 14262146  T
Q  331 ccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||| |||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  14262147 cccttattccaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaatta 14262225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 30500042 - 30500230
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||| ||||| ||||||| |||||||||||||| |||||| ||||||||||||||||          || ||||||| |||||||||||||||||||||    
T  30500042 agggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcatattct 30500139  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  30500140 tccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgaaggaatttgaaatta 30500230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 21633277 - 21633085
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| | || ||||||||||||||||| |||||| | |||||||||||| |         ||| ||||||| ||||||||||||||| |||    
T  21633277 ttagggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagatt 21633178  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| |||||||||| ||||||| || |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  21633177 cttccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaatta 21633085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 20853694 - 20853885
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattc 317  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||||||  ||||||          ||| ||||||| |||||| |||||||||||||    
T  20853694 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttaaaccctgtaaaaaaaaaagatttagattttgtccctataatttcatattc 20853793  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  20853794 ttccacttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctaaaatta 20853885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 218 - 409
Target Start/End: Complemental strand, 33372784 - 33372595
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||||||||| |||||||||||| ||||||||| |||||| || ||||||| |||||         ||| ||||||| ||||||||||||||| ||||    
T  33372784 tagggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattc 33372685  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||    
T  33372684 ttccacttttgatccc-cattccaccacgtcagcagaatctgcatac-tgacacgtaaaatgagggatcaaaagtggaggaatatgaaatta 33372595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 217 - 409
Target Start/End: Original strand, 17465364 - 17465557
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtc-cctgtaatttcatat 315  Q
    ||||||||||||| |||||| |||| | |||||||| ||||||| | ||||||| |||||         ||| ||||||||||| |||||||||||| ||    
T  17465364 ttagggtaaatacctctttttgtccttttaatattagcgaattctgattttagtacctgtaaaaaaaatgatttagatttcgtctcctgtaatttcagat 17465463  T
Q  316 tcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||| |||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  17465464 tcttccatttttgatctctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaatta 17465557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 4204709 - 4204897
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    ||||||| || ||||||||||||||||||||||| ||||| | |||||||| |||||         ||| ||||||  ||||||||||||||| ||||||    
T  4204709 gggtaaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgtaaaaaaaa-gatttagattatgtccctgtaatttcagattctt 4204807  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  4204808 ccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatatgaaatta 4204897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 220 - 409
Target Start/End: Complemental strand, 14162248 - 14162060
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||| ||||| |||||| ||||||||||||||| |||||||||||||||||||||||         ||| ||||||| |||| |||||||||| ||||||    
T  14162248 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaga-gatttagattttgtccttgtaatttcagattctt 14162150  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| ||||| |||| |||||||||||| ||| ||||||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  14162149 ccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaaatggaggaatttgaaatta 14162060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 218 - 409
Target Start/End: Complemental strand, 49986908 - 49986717
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnnga-tctagatttcgtccctgtaatttcatatt 316  Q
    |||||||||||| |||||||||||| ||||||||| |||||| |||||||||| |||||          | | ||||||| |||  ||||||||||||||    
T  49986908 tagggtaaatacctcttttcgtcccagtaatattagcgaatttcggttttagttcctgtaaaaaaaagaaatttagattttgtct-tgtaatttcatatt 49986810  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  49986809 cttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaatta 49986717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 220 - 409
Target Start/End: Complemental strand, 5800982 - 5800794
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||         ||| ||||||| |||| |||||||||||||||||    
T  5800982 gggttaatacctcttttcgtccctgtaatattagcgaattccggttt-agtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 5800884  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| ||||| |||| ||||| |||||| ||| ||||||||||||| ||||||||||||| ||||| ||||||||| ||||||||    
T  5800883 ccacttttggtcccttattccaccacttcagcaaaatttgcatacatggcatgtaaaatgagggaccaaaaatggaggaatttgaaatta 5800794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 45970295 - 45970104
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattc 317  Q
    ||||||||||| ||||||||||||||||||||||  ||||| ||||||||||||||||          ||| || |||| ||||||||||||||| ||||    
T  45970295 agggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagattc 45970196  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||| | || ||||| ||||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  45970195 ttccacttttggttccccattccaccacgtaagcagaatccgcatacatgacacgtaaaatgagggaccaaaagtggagaaatctgaaatta 45970104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 43572771 - 43572580
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| ||||||| ||||||||||||| || ||||||||||||||| |||||          || ||||||  ||||||||||||||| |||    
T  43572771 ttagggtaaatacctcttttcatccctgtaatattgacaaattccggttttagttcctgtaaaaaaaaa-atttagattctgtccctgtaatttcagatt 43572673  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| |||||||||  |||||||||||||||||||| || ||| |||||||||||||||| ||||||||||| ||| ||||||||    
T  43572672 cttccacttttggtccctcatttcaccacgtcagcagaatctgcgtaaatgacacgtaaaatgagggaccaaaagtggagtaatttgaaatta 43572580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 290 - 409
Target Start/End: Complemental strand, 38283858 - 38283739
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaa 389  Q
    ||||||| |||||| |||||||| ||||||||||||||||||||| |||  | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  38283858 tagattttgtccctataatttcagattcttccacttttgatcccttatttcatcacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaa 38283759  T
Q  390 agtggaggaatctgaaatta 409  Q
    ||||||||||| ||||||||    
T  38283758 agtggaggaatttgaaatta 38283739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 290 - 409
Target Start/End: Original strand, 52552762 - 52552881
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaa 389  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  52552762 tagattttgtccctgtaatttcagattcttccacttttgatcccttattccaccatgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaa 52552861  T
Q  390 agtggaggaatctgaaatta 409  Q
    |||| |||||| ||||||||    
T  52552862 agtgaaggaatttgaaatta 52552881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 290 - 409
Target Start/End: Complemental strand, 15328768 - 15328649
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaa 389  Q
    ||||||| ||||||||||||||| ||| ||||||||||| ||||| |||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||    
T  15328768 tagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagaccaaa 15328669  T
Q  390 agtggaggaatctgaaatta 409  Q
    ||||||||||| ||||||||    
T  15328668 agtggaggaatttgaaatta 15328649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 303 - 409
Target Start/End: Original strand, 47575356 - 47575461
Alignment:
Q  303 tgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatct 402  Q
    |||||||| |||||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  47575356 tgtaattttatattctttcacttttggtccct-attccaccacggcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaattt 47575454  T
Q  403 gaaatta 409  Q
    |||||||    
T  47575455 gaaatta 47575461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 219 - 363
Target Start/End: Complemental strand, 14262415 - 14262271
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||| ||||||||||||||||||| |    
T  14262415 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattgt 14262316  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||  |||||| ||  | |||||||||||||||||||||    
T  14262315 tccacttttagtccctcctttcatcacgtcagcagaatctgcata 14262271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 220 - 363
Target Start/End: Original strand, 5800605 - 5800748
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||         ||| ||||||  ||||||||||||||||||||||    
T  5800605 gggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattctt 5800704  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||| ||||| |||||| ||  | |||||||||||||||||||||    
T  5800705 ccatttttggtccctcctttcatcacgtcagcagaatctgcata 5800748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 221 - 363
Target Start/End: Complemental strand, 52553065 - 52552923
Alignment:
Q  221 ggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttc 320  Q
    ||||||||||||||||||||| |||||||||| |||||||  ||||||||||||||         ||| ||||||| ||| |||||||||||||||||||    
T  52553065 ggtaaatacatcttttcgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattcttc 52552966  T
Q  321 cacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||| |||||| ||  | |||||||||||||||||||||    
T  52552965 cacttttggtccctcctttcatcacgtcagcagaatctgcata 52552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 217 - 362
Target Start/End: Complemental strand, 14171967 - 14171822
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||| ||||||||||||||  |||    
T  14171967 ttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgatt 14171868  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcat 362  Q
    |||||||||||| ||| || ||  | |||||||||| |||||||||    
T  14171867 cttccacttttggtccttcctttcatcacgtcagcaaaatctgcat 14171822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 220 - 363
Target Start/End: Original strand, 14161871 - 14162014
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||  |||||||||||||||||||||| |||||||| |||||||| ||| |         ||| ||||||  ||||||||||||||||||||||    
T  14161871 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattctt 14161970  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||| |||||| ||  | |||||||||||||||||||||    
T  14161971 ccacttttggtccctcctttcatcacgtcagcagaatctgcata 14162014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 220 - 363
Target Start/End: Complemental strand, 19113143 - 19113000
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||         ||| |||||||  |||||||||||||| ||||||    
T  19113143 gggtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 19113044  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    | ||||||| |||||| ||  | || |||| |||||||||||||    
T  19113043 ctacttttggtccctcctttcatcaagtcaacagaatctgcata 19113000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 335
Target Start/End: Original strand, 43572386 - 43572504
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||          || ||||||| ||||||||||||||| |||    
T  43572386 ttagggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagatt 43572485  T
Q  317 cttccacttttgatccctc 335  Q
    |||||||||||| ||||||    
T  43572486 cttccacttttggtccctc 43572504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 217 - 362
Target Start/End: Original strand, 33372403 - 33372548
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||  |||||||||||||||||||||| ||||||| ||||||||| |||||         ||| ||||||| ||||||||||||||| |||    
T  33372403 ttagggtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttcagatt 33372502  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcat 362  Q
     ||||||||||| |||||| ||  | |||||||||| |||||||||    
T  33372503 attccacttttggtccctcctttcatcacgtcagcaaaatctgcat 33372548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 363
Target Start/End: Complemental strand, 30500419 - 30500276
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||          || ||||||| ||||||||||||||||||| |    
T  30500419 agggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaa-atttagattttgtccctgtaatttcatattgt 30500321  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||| |||||| ||  | |||||||||| ||||| ||||    
T  30500320 tccacttttggtccctcctttcatcacgtcagcaaaatctacata 30500276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 363
Target Start/End: Original strand, 45969914 - 45970058
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||         ||| ||||||| ||||||||||||||| |||||    
T  45969914 agggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 45970013  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    | |||||||| || ||| ||  | || |||| |||||||||||||    
T  45970014 ttcacttttggtctctcctttcatcaagtcaacagaatctgcata 45970058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 217 - 363
Target Start/End: Original strand, 38283547 - 38283693
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||| ||||||  ||||||| |||||||||||||||||||||||||||||||||| |||          || ||||||| || ||| ||||||||||||    
T  38283547 ttaggataaatatctcttttcatccctgtaatattaacgaattccggttttagtccttgtaaaaaaaaaaatttagattttgttcctataatttcatatt 38283646  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
     |||||||||||||||||| ||  | |||||||||||||||| ||||    
T  38283647 gttccacttttgatccctcctttcatcacgtcagcagaatctacata 38283693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 219 - 363
Target Start/End: Original strand, 16721990 - 16722134
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||          || ||||||| |||| |||||||||| |||||    
T  16721990 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattct 16722089  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||| |||||  ||  | || |||| |||||||||||||    
T  16722090 tccacttttggtcccttctttcatcaagtcaacagaatctgcata 16722134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 220 - 320
Target Start/End: Original strand, 19720333 - 19720433
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||  |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||| ||||||||||||||||||||||    
T  19720333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 19720432  T
Q  320 c 320  Q
    |    
T  19720433 c 19720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 35996054 - 35995997
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  35996054 agggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgt 35995997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 335
Target Start/End: Complemental strand, 20854076 - 20853959
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||  ||||||||||| |||||||||| |||||| |||||||||| |||||         ||| ||||||| ||||||||||||||| |||    
T  20854076 ttagggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagt-cctgtaaaaaaaaagatttagattttgtccctgtaatttcagatt 20853978  T
Q  317 cttccacttttgatccctc 335  Q
    |||||||||||| ||||||    
T  20853977 cttccacttttggtccctc 20853959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 11003731 - 11003840
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||| |||| |||||||||| |||||||||||||||||||||||         ||  ||||||| |||| |||||||||| |||||    
T  11003731 agggtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaatttcagattct 11003830  T
Q  319 tccacttttg 328  Q
    ||||||||||    
T  11003831 tccacttttg 11003840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 363
Target Start/End: Original strand, 21632900 - 21633039
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| ||||||     ||||||||||||         ||||||||| | ||||||||||||||| |||||    
T  21632900 agggtaaatacctcttttcgtccctgtaatattagcgaatt-----tttagtccctgtaaaaaaaaagatctagatgttgtccctgtaatttcagattct 21632994  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    | |||||||| |||||| ||  | || |||| |||||||||||||    
T  21632995 ttcacttttggtccctcctttcatcaagtcaacagaatctgcata 21633039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 27946244 - 27946187
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||    
T  27946244 agggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgt 27946187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 49986524 - 49986636
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt-nnnnnnnnngatctagatttcgtccctgtaatttcatat 315  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||          ||| ||||||| ||||||||||||||| ||    
T  49986524 ttagggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcagat 49986623  T
Q  316 tcttccacttttg 328  Q
    ||||| |||||||    
T  49986624 tcttctacttttg 49986636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 359
Target Start/End: Original strand, 45003496 - 45003635
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||  |||||||||||| ||||||||| | ||||||||||| ||||||| |         ||| ||||||| ||||||||||||||| ||||||    
T  45003496 gggtaaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagattctt 45003595  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctg 359  Q
    ||||||||  |||||| ||  | ||||||| |||||||||    
T  45003596 ccactttttgtccctcctttcatcacgtcaacagaatctg 45003635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 9267355 - 9267296
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||    
T  9267355 ttagggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgt 9267296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 27946114 - 27946165
Alignment:
Q  225 aatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||| |||||||||||||||||||||| |||||| ||||||||||||||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 27946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 35740829 - 35740955
Alignment:
Q  232 cttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgatc 331  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||           | ||||||| ||||||||||||| | ||||||||||||||  ||    
T  35740829 cttttggtccctgtaatattagcgaattccggttttagtccccgtaaaaaaaag--tttagattttgtccctgtaattttaaattcttccacttttagtc 35740926  T
Q  332 cctcattcaaccacgtcagcagaatctgc 360  Q
    ||||| | || ||| ||||||||||||||    
T  35740927 cctcaataaaacacatcagcagaatctgc 35740955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 3426028 - 3425973
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccc 273  Q
    |||||| ||||| |||||| | ||||||||||||| ||||||||||||||||||||    
T  3426028 tagggttaatacctcttttggcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 360
Target Start/End: Complemental strand, 36991039 - 36990898
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||| |||||  ||||| ||||||||||||||| |||||| ||||||||||||||||         | | ||||||  ||||||||||||| | ||||    
T  36991039 tagggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattc 36990941  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgc 360  Q
    ||||||||||  ||||||| | || ||| ||||| ||||||||    
T  36990940 ttccacttttagtccctcaataaaacacatcagcggaatctgc 36990898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 360
Target Start/End: Complemental strand, 37016479 - 37016338
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||| |||||  ||||| ||||||||||||||| |||||| ||||||||||||||||         | | ||||||  ||||||||||||| | ||||    
T  37016479 tagggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattc 37016381  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgc 360  Q
    ||||||||||  ||||||| | || ||| ||||| ||||||||    
T  37016380 ttccacttttagtccctcaataaaacacatcagcggaatctgc 37016338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 45003679 - 45003718
Alignment:
Q  299 tccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  45003679 tccctgtaatttcatattcctccacttttgatccctcatt 45003718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 17649389 - 17649245
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||| ||||||| |||||||| |||||||||| || ||||||||||||||||| ||||          ||| ||||||| ||||||||||||||| |||     
T  17649389 taggttaaatacctcttttcgaccctgtaatactagcgaattccggttttagttcctg-gaaaaaaaagatttagattttgtccctgtaatttcagatta 17649291  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||| |||| || ||| ||  | || |||| |||||||||||||    
T  17649290 ttccacatttggtctctccttttatcaagtcaacagaatctgcata 17649245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 3424773 - 3424830
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||| ||||| |||||| ||||||||||||||| ||| |||||||||| ||||||||    
T  3424773 agggttaatacctcttttggtccctgtaatattagcgatttccggttttggtccctgt 3424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 15328530 - 15328603
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| ||||||||||||||||||||||||| |||   |||||| ||  | ||||||| |||||||||||||    
T  15328530 tagattttgtccctgtaatttcatattcttccagtttgtgtccctcttttcatcacgtcaacagaatctgcata 15328603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 35741963 - 35741906
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||| |||||  ||||| ||||||||||||||| |||||||| ||||||||||||||    
T  35741963 agggttaataccacttttggtccctgtaatattagcgaattccagttttagtccctgt 35741906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 363
Target Start/End: Complemental strand, 4204999 - 4204943
Alignment:
Q  307 atttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||| |||||||||||||||||||||| ||  | |||||||| ||||||||||||    
T  4204999 atttcagattcttccacttttgatccctctttttatcacgtcagtagaatctgcata 4204943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 24490298 - 24490242
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctg 275  Q
    ||||||||||  | ||||| ||||||||||||||  |||||||||||||||||||||    
T  24490298 agggtaaatatcttttttcctccctgtaatattagtgaattccggttttagtccctg 24490242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 33372592 - 33372628
Alignment:
Q  302 ctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||||||||||||||| ||||||||||||||||||||    
T  33372592 ctgtaatttcatattcctccacttttgatccctcatt 33372628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 45058799 - 45058731
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatct 358  Q
    ||||||| ||| ||||||||||| ||||||||| ||||||||||| |||| |||| || ||| ||||||    
T  45058799 tagattttgtctctgtaatttcagattcttccatttttgatcccttattccaccatgtaagccgaatct 45058731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 47575468 - 47575428
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  47575468 gtccctgtaatttcaaattcctccacttttgatccctcatt 47575428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 32998434 - 32998371
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgca 361  Q
    ||||||||||||||| |||| |||||||||  |||||| || ||||| ||||||||||| ||||    
T  32998434 gtccctgtaatttcagattcctccacttttagtccctcgtttaaccatgtcagcagaatttgca 32998371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 9267283 - 9267210
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| ||||||||||| ||| ||||||| ||||||| |||||| ||  | || |||| |||||||||||||    
T  9267283 tagattttgtccctgtaatatcagattcttctacttttggtccctcctttcatcaagtcaacagaatctgcata 9267210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 17465561 - 17465524
Alignment:
Q  301 cctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  17465561 cctgtaatttcatattcctccacttttggtccctcatt 17465524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 17465746 - 17465697
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggtttta 268  Q
    ||||||||||| ||||||||||| |||||||||| |||||| | ||||||    
T  17465746 agggtaaatacctcttttcgtccttgtaatattagcgaatttcagtttta 17465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 47575580 - 47575507
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| ||| ||||||||||| ||| ||| ||||||| || ||| ||  | |||||||||||||||||||||    
T  47575580 tagattttgtctctgtaatttcagatttttcaacttttggtctctcctttcatcacgtcagcagaatctgcata 47575507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 14171782 - 14171742
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| |||| |||||||||||||||    
T  14171782 gtccctgtaatttcagattcctccatttttgatccctcatt 14171742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 15328463 - 15328519
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||||||||| ||||||||| ||||||||||||   |||| || |||||||||||||    
T  15328463 gggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgt 15328519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 15328842 - 15328786
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccc 273  Q
    ||||||| ||||| ||||||| || ||||||||||| ||||||  ||||||||||||    
T  15328842 ttagggttaatacctcttttcatctctgtaatattagcgaattttggttttagtccc 15328786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 16722173 - 16722213
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  16722173 gtccctgtaatttcagattcctccacttttggtccctcatt 16722213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 35995874 - 35995834
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||||||||||||||| ||| |||||||||| |||||||||    
T  35995874 gtccctgtaatttcatgttcctccacttttggtccctcatt 35995834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 49986710 - 49986750
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  49986710 gtccctgtaatttcagattcctccacttttggtccctcatt 49986750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 1e-60; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 75 - 205
Target Start/End: Original strand, 30107479 - 30107609
Alignment:
Q  75 taccgtggggcttctccatgacattcacgtaggacataaaaattgtatttctactaatcattttatctatcattacattcacatatcttgaacaccaact 174  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30107479 taccgtggggcttctccatgacattcacgtaagacataacaattgtatttctactaatcattttatctatcattacattcacatatcttgaacaccaact 30107578  T
Q  175 tataagttaatttggagcaactgtcaccacc 205  Q
    |||||||||||||||||||||| ||||||||    
T  30107579 tataagttaatttggagcaactctcaccacc 30107609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 218 - 409
Target Start/End: Original strand, 46046428 - 46046613
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||||||||| | |||||||||||||||||||| ||||||||| |||||||||||||          |  ||||||| ||||||||||||||||||||    
T  46046428 tagggtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa------aaatagattttgtccctgtaatttcatattc 46046521  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46046522 ttccacttttgatccctcattccaccacgttagtagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 46046613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 221 - 409
Target Start/End: Original strand, 9516611 - 9516799
Alignment:
Q  221 ggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttc 320  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||||| |||         ||| ||||||| |||| ||||||||||||||||||    
T  9516611 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttc 9516710  T
Q  321 cacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  9516711 cacttttggtccctcattccaccacgtaagcagaatctgcatacatgatacgtaaaatgagggaccaaaagtggaggaatctgaaatta 9516799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 38573968 - 38574157
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| ||||||||||| ||||||||||  |||||||| ||||| |||||||         ||| ||||||| |||||||||||||||||||||    
T  38573968 agggtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattct 38574066  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  38574067 tccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggaccaaaagtggaggaatatgaaatta 38574157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 9397079 - 9396888
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||         ||| ||||||| ||||||||||||||| |||    
T  9397079 ttagggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcagatt 9396981  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||  || |||||| | ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  9396980 cttccacttttggaccatcattccaacacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatgaaatta 9396888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 9619358 - 9619168
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||| ||||||||||||||| ||||||| |||||||||||||||         ||| ||||||| |||| ||||||||||||||||    
T  9619358 agggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattct 9619259  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| ||| |||||| ||||||| ||||||||||| |||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  9619258 tccacttttggtccttcattccaccacgtaagcagaatctgtatacctggcacgtaaaaagagggagcaaaagtggaggaatctgaaatta 9619168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 220 - 409
Target Start/End: Complemental strand, 26252615 - 26252425
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||  |||||||||||||||||||||| |||||||| |||||||| |||||         ||| ||||||| ||||||||||||||||||||||    
T  26252615 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 26252516  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagt-ggaggaatctgaaatta 409  Q
    ||||||||| |||| ||||| || |||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  26252515 ccacttttggtcccccattccactacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgggaggaatctgaaatta 26252425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 221 - 409
Target Start/End: Original strand, 34063983 - 34064171
Alignment:
Q  221 ggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttc 320  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||         ||| ||||||| ||| ||||||||||| |||||||    
T  34063983 ggtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttc 34064082  T
Q  321 cacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||| |||||||||| ||||| ||||| |||||| ||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  34064083 cacttttggtccctcattccaccacatcagccgaatctacatacatggcatgtaaaatgagggactaaaagtggaggaatctgaaatta 34064171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 31944329 - 31944139
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| ||||||||||| |||||||||| |||||| ||||||||||| ||||          |  ||||||| |||| ||||||||||||||||    
T  31944329 agggtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgtaaaaaaaaataattagattttgtccatgtaatttcatattct 31944230  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||  |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  31944229 tccactttttgtccctcattccaccacgtcaacagaatctgcatacttggcacgtaaaatgagggaccaaaagtggaggaatctgaaatta 31944139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 31090060 - 31090250
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattct 318  Q
    |||||||||| |||||| |||||||||||||||  ||||| || |||||||||||||          ||| ||||||| |||||||||||||||||||||    
T  31090060 gggtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 31090159  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||||| ||||||| |||||||| ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  31090160 tccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgaaggaccaaaagtggaggaatctgaaatta 31090250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 225 - 409
Target Start/End: Original strand, 37012712 - 37012896
Alignment:
Q  225 aatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccact 324  Q
    ||||| ||||||||||| |||||||||| |||||||   ||| ||||| |||         ||| ||||||| ||||||||||||||| |||||||||||    
T  37012712 aatacctcttttcgtccttgtaatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 37012811  T
Q  325 tttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  37012812 tttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaatta 37012896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 290 - 407
Target Start/End: Complemental strand, 48260059 - 48259942
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaa 389  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||    
T  48260059 tagattttgtccctgtaatttcaaattcttccacttttgatcgctcattccatcacgtcagcataatctgcatacatggcacgtaaaatgagggatcaaa 48259960  T
Q  390 agtggaggaatctgaaat 407  Q
    ||||||||||||||||||    
T  48259959 agtggaggaatctgaaat 48259942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 218 - 409
Target Start/End: Complemental strand, 3018390 - 3018201
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||| ||||  ||||||||||||||||||||||||||||| ||||||||||||||||         ||| ||||||| |||| |||||||||| ||||    
T  3018390 tagggttaatatctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaa-gatttagattt-gtccgtgtaatttcagattc 3018293  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    | ||||||||| ||||| |||| |||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  3018292 taccacttttggtcccttattccaccacgtcagcataatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaatta 3018201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 290 - 409
Target Start/End: Complemental strand, 7819322 - 7819203
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaa 389  Q
    ||||||| ||||||||||| ||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaa 7819223  T
Q  390 agtggaggaatctgaaatta 409  Q
    ||||||||||| ||||||||    
T  7819222 agtggaggaatatgaaatta 7819203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 225 - 409
Target Start/End: Original strand, 48579871 - 48580055
Alignment:
Q  225 aatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccact 324  Q
    ||||| ||||||||||||||||||||||||||| | |||||||||||  |||         ||| ||||||| ||| ||||||||||| |||||| || |    
T  48579871 aatacctcttttcgtccctgtaatattaacgaagttcggttttagtctatgtaaaaaaaaagatttagattttgtctctgtaatttcagattctttcaat 48579970  T
Q  325 tttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  48579971 tttggtcccttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggagcaaaagtggaggaatttgaaatta 48580055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 220 - 409
Target Start/End: Complemental strand, 3273996 - 3273810
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||||||||| ||||||||| |||||| |||||||||||||| |         ||| |||||||  |||||||||||||| ||||||    
T  3273996 gggtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccctataaaaaaaa-gatttagattttatccctgtaatttcagattctt 3273899  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||    
T  3273898 ccacttttgatccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatga-ggaccaaacgtggagtaatctgaaatta 3273810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 223 - 409
Target Start/End: Original strand, 13131943 - 13132130
Alignment:
Q  223 taaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattcttcc 321  Q
    ||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||          ||| ||||||  || | |||||||||| ||||||||    
T  13131943 taaatacctcttttcgtccttgtaatattaacgaatttctgttttagtccctgtaaaaaaaaaagatttagattatgttcatgtaatttcagattcttcc 13132042  T
Q  322 acttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||   |||||||||| ||||||||||||    
T  13132043 acttttgatccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgaggggctaaaagtggagtaatctgaaatta 13132130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 221 - 409
Target Start/End: Complemental strand, 15641093 - 15640904
Alignment:
Q  221 ggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattctt 319  Q
    ||||||||| ||||||||||| ||||||||||  |||||||||||||| | |||||          ||| ||||||  ||||||||||||||| ||||||    
T  15641093 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttaattcctgtaaaaaaaaaagatttagattatgtccctgtaatttcagattctt 15640994  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| | |||||||  |||||||||||||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  15640993 ccacttttggttcctcatttcaccacgtcagcagaatatgcatacatgacacgtaaaatgatggaccaaaagtggaggaatctgaaatta 15640904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 292 - 409
Target Start/End: Complemental strand, 4356187 - 4356070
Alignment:
Q  292 gatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaag 391  Q
    ||||| ||| ||||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  4356187 gattttgtctctgtaatttcaaattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaag 4356088  T
Q  392 tggaggaatctgaaatta 409  Q
    ||||||||| ||||||||    
T  4356087 tggaggaatttgaaatta 4356070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 231 - 403
Target Start/End: Complemental strand, 35376494 - 35376322
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgat 330  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||         ||| || |||| ||||||||||||||| | ||||||||||||| |    
T  35376494 tcttttcgtccctgtaatattagcaaattccagttttagtccctgtaaaaaaaa-gatttaaattttgtccctgtaatttcagaatcttccacttttggt 35376396  T
Q  331 ccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagt-ggaggaatctg 403  Q
    ||||||||| |||||||||||| |||||| ||||||| |||||||||||||||| ||||||| |||||||||||    
T  35376395 ccctcattccaccacgtcagcaaaatctgtatacatgacacgtaaaatgagggaccaaaagtgggaggaatctg 35376322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 291 - 409
Target Start/End: Complemental strand, 18667596 - 18667478
Alignment:
Q  291 agatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaa 390  Q
    |||||| | ||||||||||||| ||||||||| ||||  ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  18667596 agattttgaccctgtaatttcagattcttccagtttttgtcccttattccaccacgtcagtagaatctgcatacatggcacgtaaaatgagggaccaaaa 18667497  T
Q  391 gtggaggaatctgaaatta 409  Q
    |||||||||| | ||||||    
T  18667496 gtggaggaatttaaaatta 18667478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 219 - 362
Target Start/End: Complemental strand, 46046802 - 46046660
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||| ||||||||||||||| |||||    
T  46046802 agggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 46046704  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcat 362  Q
    ||||||||||||||||| ||  | |||||||||| |||||||||    
T  46046703 tccacttttgatccctcctttcatcacgtcagcaaaatctgcat 46046660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 223 - 363
Target Start/End: Original strand, 3018014 - 3018155
Alignment:
Q  223 taaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattcttcc 321  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| ||          ||| ||||||| ||||||||||||||||||||||||    
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 3018113  T
Q  322 acttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| |||||| ||  | |||||||||||||||||||||    
T  3018114 acttttggtccctcctttcatcacgtcagcagaatctgcata 3018155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 290 - 409
Target Start/End: Complemental strand, 18713268 - 18713149
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaa 389  Q
    ||||||| ||| ||||||||||| ||||||||| ||||| ||||| |||| |||||||||||||||||| ||||||| | ||||||| ||||||| ||||    
T  18713268 tagattttgtctctgtaatttcagattcttccagttttggtcccttattccaccacgtcagcagaatctacatacattgaacgtaaactgagggaccaaa 18713169  T
Q  390 agtggaggaatctgaaatta 409  Q
    ||| ||||||| ||||||||    
T  18713168 agttgaggaatttgaaatta 18713149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 30107389 - 30107451
Alignment:
Q  13 atgaaagcctaaacaaagaataaaatcagtcacaacagatttggtgcattacagggtcttctt 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30107389 atgaaagcctaaacaaagaataaaatcagtcacaacagatttggtgcattacagggtcttctt 30107451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 217 - 362
Target Start/End: Complemental strand, 38574349 - 38574204
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||| ||||||| | |||||||||||||||||||| ||||||| |||||||||||||||         ||| ||||||| |||||||||||||||||||    
T  38574349 ttaggataaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatatt 38574250  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcat 362  Q
    |||||||||||| |||||| ||  | ||||||| || |||||||||    
T  38574249 cttccacttttggtccctcctttcatcacgtcaacaaaatctgcat 38574204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 363
Target Start/End: Original strand, 9618977 - 9619123
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    |||| |||||||| | ||||||||| |||||||||| |||||||||||||||||||||||         ||| ||||||| ||||||||||||||| |||    
T  9618977 ttagagtaaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagatt 9619076  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||||| |||||| ||  | || |||| |||||||||||||    
T  9619077 cttccacttttggtccctcctttcatcaagtcaacagaatctgcata 9619123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 363
Target Start/End: Complemental strand, 37013085 - 37012942
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| || ||||||||||||||||||| ||||||| |||||||||||||||          || ||||||| |||||||||||||||||||||    
T  37013085 agggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaaaat-tagattttgtccctgtaatttcatattct 37012987  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||| || ||| ||  | |||||||||| ||||||||||    
T  37012986 tccacttttggtcactcctttcatcacgtcagcaaaatctgcata 37012942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 223 - 363
Target Start/End: Original strand, 9396702 - 9396842
Alignment:
Q  223 taaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttcca 322  Q
    ||||||| |||||||||||||||||||||| |||||| || |||||||| ||||         ||| ||||||| |||||| |||||||| ||| |||||    
T  9396702 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttcaaatttttcca 9396801  T
Q  323 cttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||| |||||| ||  | |||||||||||||||||||||    
T  9396802 cttttggtccctcctttcatcacgtcagcagaatctgcata 9396842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 31943947 - 31944058
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt-nnnnnnnnngatctagatttcgtccctgtaatttcatat 315  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||          ||| ||||||| ||||||||||||||||||    
T  31943947 ttagggtaaatac-tcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatat 31944045  T
Q  316 tcttccacttttg 328  Q
    |||||||||||||    
T  31944046 tcttccacttttg 31944058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 363
Target Start/End: Original strand, 15640727 - 15640858
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgat 330  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||         ||| ||||||| |||||||||||||||||||||| |||||||| |    
T  15640727 tcttttcgtccctgtaatattagcgaattccggttttagttcctgt-aaaaaaaagatttagattttgtccctgtaatttcatattctttcacttttggt 15640825  T
Q  331 ccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||| ||  | ||| |||||||||| ||||||    
T  15640826 ccctcctttcatcacatcagcagaatatgcata 15640858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 31218361 - 31218303
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  31218361 tagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 31218303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 220 - 335
Target Start/End: Complemental strand, 9516988 - 9516873
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||  |||||||||||||||||||||| |||||| ||||||||||| ||||         ||| ||||||| ||||||||||||||| ||||||    
T  9516988 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 9516889  T
Q  320 ccacttttgatccctc 335  Q
    | ||||||| ||||||    
T  9516888 ctacttttggtccctc 9516873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 221 - 363
Target Start/End: Original strand, 35376164 - 35376305
Alignment:
Q  221 ggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttc 320  Q
    ||||||||| | |||||||||||||||||||| ||||||| |||||||||||||||         ||| ||||||| ||| ||||||||| | |||||||    
T  35376164 ggtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgt-aaaaaaaagatttagattttgtctctgtaattttagattcttc 35376262  T
Q  321 cacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||| || ||| ||  | ||||||||||||||| |||||    
T  35376263 cacttttggtctctcctttcatcacgtcagcagaatccgcata 35376305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 335
Target Start/End: Original strand, 3273618 - 3273737
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt-nnnnnnnnngatctagatttcgtccctgtaatttcatat 315  Q
    ||||||||||||  |||||||||||||||||||||| ||||||||| |||||||||| ||            | ||||||| ||||||||||||||||||    
T  3273618 ttagggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatat 3273717  T
Q  316 tcttccacttttgatccctc 335  Q
    ||||||||||||| ||||||    
T  3273718 tcttccacttttggtccctc 3273737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 41946964 - 41947020
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctg 275  Q
    ||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||    
T  41946964 agggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctg 41947020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 335
Target Start/End: Complemental strand, 48580239 - 48580129
Alignment:
Q  225 aatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccact 324  Q
    ||||| |||||||||||||||||||||| ||||||||||||||| |||   |         ||| ||||||| ||||||||||||||||||| |||||||    
T  48580239 aatacctcttttcgtccctgtaatattagcgaattccggttttaatcctgataaaaaaaacgatttagattttgtccctgtaatttcatattgttccact 48580140  T
Q  325 tttgatccctc 335  Q
    |||| ||||||    
T  48580139 tttggtccctc 48580129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 13132319 - 13132176
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||||||||| | |||||||||||||||||||| |||||| || ||||||| |||||         ||| ||||||  ||||||||||||||||||||    
T  13132319 tagggtaaatacctattttcgtccctgtaatattagcgaatttcgattttagt-cctgt-aaaaaaaagatttagattctgtccctgtaatttcatattc 13132222  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||||| |||||  ||  | ||  |||||||||||||||||    
T  13132221 ttccacttttggtcccttctttcatcaaatcagcagaatctgcata 13132176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 31090440 - 31090324
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||  |||||||||||||||||||||| |||||| || |||||||||||||          |  ||||||| ||||||||||||||| |||||    
T  31090440 agggtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattct 31090341  T
Q  319 tccacttttgatccctc 335  Q
    || ||||||| ||||||    
T  31090340 tctacttttggtccctc 31090324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 48259822 - 48259879
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||||||||  |||||||||||||||||||||| ||||||||||||||| |||||||    
T  48259822 agggtaaatatctcttttcgtccctgtaatattagcgaattccggttttaatccctgt 48259879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 4355951 - 4356024
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| |||  ||||||||||||||||| |||||||| |||||||||  | ||||| |||||||||||||||    
T  4355951 tagattttgtctatgtaatttcatattctttcacttttggtccctcatttcatcacgttagcagaatctgcata 4356024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 347
Target Start/End: Original strand, 12904746 - 12904873
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||  ||||||||||||| |||||||| ||||||  |||||||||||||||          || ||||||| |||| | |||||||| |||||    
T  12904746 agggtaaatatctcttttcgtccctataatattagcgaattttggttttagtccctgtaaaaaaaaa-atttagattttgtccttataatttcagattct 12904844  T
Q  319 tccacttttgatccctcattcaaccacgt 347  Q
    |||||||||| || ||||||| |||||||    
T  12904845 tccacttttggtctctcattccaccacgt 12904873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 18713030 - 18713103
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| ||||||||||||||||||| ||||| ||||| |||||| ||  | |||||||||| ||||||||||    
T  18713030 tagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatcacgtcagcaaaatctgcata 18713103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 26252338 - 26252411
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||| ||  | || |||| |||||||||||||    
T  26252338 tagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctgcata 26252411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 34064290 - 34064217
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| ||| ||||||||||| ||||||||||||||| |||||  ||  | |||||||||||||||||||||    
T  34064290 tagattttgtctctgtaatttcagattcttccacttttggtcccttctttcatcacgtcagcagaatctgcata 34064217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 7819012 - 7819122
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||| ||||||| |||||||| || | |||||||| ||||||||||||||||| | |||         ||| ||||||| ||||||||||||||| |||    
T  7819012 ttaggttaaatacctcttttcgaccatataatattagcgaattccggttttagt-catgtaaataaaaagatttagattttgtccctgtaatttcagatt 7819110  T
Q  317 cttccacttttg 328  Q
    ||||||||||||    
T  7819111 cttccacttttg 7819122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 41947232 - 41947180
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtcc 272  Q
    |||||||||  |||||||||||||||||||||| |||||| ||||||||||||    
T  41947232 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtcc 41947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 18667669 - 18667612
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||| ||||| |||||||||||||||||||||| |||||||| |||||| ||| |||    
T  18667669 agggttaatacctcttttcgtccctgtaatattagcgaattccagttttaatccttgt 18667612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 36887679 - 36887736
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||| ||||| |||||| ||||||||||||||| ||||||  |||||||||||||||    
T  36887679 agggttaatacctcttttggtccctgtaatattagcgaattttggttttagtccctgt 36887736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 360
Target Start/End: Complemental strand, 50462687 - 50462634
Alignment:
Q  307 atttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgc 360  Q
    |||||| ||||||||||||||||||||||| | || || |||||||||||||||    
T  50462687 atttcagattcttccacttttgatccctcactaaaacatgtcagcagaatctgc 50462634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 46046620 - 46046580
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  46046620 gtccctgtaatttcagattcctccacttttgatccctcatt 46046580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 46934083 - 46934123
Alignment:
Q  232 cttttcgtccctgtaatattaacgaattccggttttagtcc 272  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  46934083 cttttggtccctgtaatattaacaaattccggttttagtcc 46934123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 9396882 - 9396921
Alignment:
Q  299 tccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  9396882 tccctgtaatttcatattcctccacttttggtccctcatt 9396921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 36888980 - 36888917
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgca 361  Q
    ||||||||||||||| |||| |||||||||  |||||| || ||||  ||||||||||||||||    
T  36888980 gtccctgtaatttcagattcctccacttttagtccctcgtttaaccttgtcagcagaatctgca 36888917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 3273879 - 3273913
Alignment:
Q  375 aaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||||||||||| |||||||||||||    
T  3273879 aaatgagggatcaaaagtggaagaatctgaaatta 3273913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 409
Target Start/End: Complemental strand, 13132060 - 13132026
Alignment:
Q  375 aaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||||||||||| |||||||||||||    
T  13132060 aaatgagggatcaaaagtggaagaatctgaaatta 13132026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 20069678 - 20069620
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||||||||||   ||||||||||||||||||| | |||||||| ||||| ||||||||    
T  20069678 tagggtaaatatcccttttcgtccctgtaatatgagcgaattccagttttggtccctgt 20069620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 7819400 - 7819347
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtc 271  Q
    |||||||||||  | |||||||||| ||||||||| |||||| |||||||||||    
T  7819400 tagggtaaatatcttttttcgtcccggtaatattagcgaatttcggttttagtc 7819347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 12904963 - 12904906
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||||||||||||||||||||   |||||||||| ||||||  | |||||||||||||    
T  12904963 agggtaaatacatcttttcgtttatgtaatattagcgaattttgattttagtccctgt 12904906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 51029140 - 51029095
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||||| ||||||||||||| | |||||| ||||||||||||||||    
T  51029140 tcttttggtccctgtaatatgagcgaatttcggttttagtccctgt 51029095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 53896445 - 53896502
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||| ||||| ||||||  || ||||||||| | |||||||||||||||||||||||    
T  53896445 agggttaatacctcttttgatcgctgtaatatgagcgaattccggttttagtccctgt 53896502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 7819196 - 7819236
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||| ||||||||||||||| |||||||||| |||||||||    
T  7819196 gtccatgtaatttcatattcctccacttttggtccctcatt 7819236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 9516806 - 9516766
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  9516806 gtccctgtaatttcagattcctccacttttggtccctcatt 9516766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 38574160 - 38574124
Alignment:
Q  302 ctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||||||||||||||| |||||||||| |||||||||    
T  38574160 ctgtaatttcatattcctccacttttggtccctcatt 38574124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 41947164 - 41947120
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccct 334  Q
    ||||||| |||| |||||||||||||| ||||||||||| |||||    
T  41947164 tagattttgtccttgtaatttcatatttttccacttttggtccct 41947120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 43313577 - 43313533
Alignment:
Q  232 cttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||| ||| ||||||||||| ||||||| |||||||||||||||    
T  43313577 cttttggtctctgtaatattagcgaattctggttttagtccctgt 43313533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 48259933 - 48259973
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||||||| |||||| |||| ||||||||||||||||||||    
T  48259933 gtccctgttatttcagattcctccacttttgatccctcatt 48259973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 50462777 - 50462733
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattcc 261  Q
    ||||||| ||||| |||||| ||||||||||||||| ||||||||    
T  50462777 ttagggttaatacctcttttggtccctgtaatattagcgaattcc 50462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 1e-60; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 220 - 409
Target Start/End: Complemental strand, 23806330 - 23806141
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||| ||||||||||||||| |||||| ||||||||||||||||         ||| ||||||| ||||||||||||||||||||||    
T  23806330 gggtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23806231  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23806230 ccacttttggtccctcattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaatta 23806141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 220 - 409
Target Start/End: Complemental strand, 15106443 - 15106256
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||||||||| ||||||||| |||||| || |||||||||||||          || ||||||| ||||||||||||||| ||||||    
T  15106443 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcagattctt 15106346  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15106345 ccacttttgatccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 15106256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 217 - 409
Target Start/End: Original strand, 26560553 - 26560743
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||| ||||  ||||||||||||||||||||||||||||| || |||||||||||||         ||| ||||||| ||||||||||||||| |||    
T  26560553 ttagggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgtaaaaaaa--gatttagatttagtccctgtaatttcagatt 26560650  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26560651 cttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatttgaaatta 26560743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 17850587 - 17850775
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||||||||||||||||||| ||||||||| ||||||||||| |         ||| ||||||| ||| ||||||||| | ||||||    
T  17850587 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctataaaaaaaa-gatttagattttgtctctgtaatttaagattctt 17850685  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  17850686 ccacttttgatccctcattccaccacgtcagcagaatctgcatacatggtacctaaaatgagggatcaaaagtggaggaatctgaaatta 17850775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 17463470 - 17463280
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||         ||| ||||||| |||||||||||| ||||||||    
T  17463470 agggtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattct 17463371  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||||||||||| |||| || |||||||||||||||||||||| ||||||||||||| ||||| | ||||||||| ||||||    
T  17463370 tccacttttgatccctcattccaccatgtaagcagaatctgcatacatggcatgtaaaatgagggaccaaaattagaggaatctaaaatta 17463280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 26236473 - 26236284
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| |||||| |||||||||||| ||          ||| ||||||| ||||||||||||||| |||||    
T  26236473 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccttg-gaaaaaaaagatttagattttgtccctgtaatttcagattct 26236375  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||| ||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  26236374 tccatttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaatta 26236284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 22263192 - 22263380
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||| ||||||||||||| ||||||||||||||  |||||| |||||||||| || |         ||| ||||||| ||||||||||||||||||||||    
T  22263192 gggttaatacatcttttcatccctgtaatattagagaattctggttttagtctctatgaaaaaaa-gatttagattttgtccctgtaatttcatattctt 22263290  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  22263291 ccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaatta 22263380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 19251850 - 19251659
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||         ||| ||||||  |||| ||||||||||||||    
T  19251850 ttagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaa-gatttagattctgtccttgtaatttcatatt 19251752  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| | |||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  19251751 cttccactttcggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgatggaccaaaagtggaggaatatgaaatta 19251659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 20499126 - 20498934
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| | ||||| || ||| ||||||||| |||||||||||||||| ||||         ||| ||||||| ||||||||||||||| |||    
T  20499126 ttagggtaaatacctattttcatctctgaaatattaacaaattccggttttagtcactgtaaaaaaaaagatttagattttgtccctgtaatttcagatt 20499027  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||| |||||||| ||| |||||  ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  20499026 ctttcacttttggtccttcatttcaccacatcagcagaatctgcatacatagcacgtaaaatgagggatcaaaagtggagtgatctgaaatta 20498934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 231 - 409
Target Start/End: Original strand, 30390470 - 30390648
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgat 330  Q
    ||||||||||| |||||||||| ||||||||| ||||| |||||||          |  ||||||| ||||||||||||||||||||||||||||||| |    
T  30390470 tcttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattcttccacttttggt 30390569  T
Q  331 ccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||| ||||| || |||||||||||||||    
T  30390570 ccctcattccaccacgtaagcaaaatctgcatacatagcacgtaaaatgagggaccaaaaatgaaggaatctgaaatta 30390648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 220 - 409
Target Start/End: Complemental strand, 26136195 - 26136006
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattct 318  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||||||||| |||          ||| ||||||| |||  ||||||||||||||||    
T  26136195 gggtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagtcc-tgtaaaaaaaaaagatttagattttgtcattgtaatttcatattct 26136097  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||| ||| ||| | ||||| |||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||||    
T  26136096 tccacttttgatctctcgttccatcacgtaagcagaatctgcatacatggtacgtaaaataagggaccaaaagtggaggaatctaaaatta 26136006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 42670717 - 42670908
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatc--tagatttcgtccctgtaatttcatattc 317  Q
    |||| ||||| ||||||||||||||||||| || |||||||||||||||||||||||          |    ||||||| |||| |||||||||||||||    
T  42670717 gggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgtaaaaaaaaaaaaaattagattttgtccttgtaatttcatattc 42670816  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||| ||||| |||| |||||||||||| ||| ||| ||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  42670817 ttccacttttggtcccttattccaccacgtcagcaaaatttgcttacatggcacgtaaaatgagggaccaaaaatggaggaatttgaaatta 42670908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 39878406 - 39878291
Alignment:
Q  294 tttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtg 393  Q
    ||||||||||||||||||| ||| || |||||||| |||||||||  |||||| |||||||||||||||| ||| |||||||||||||||| ||||||||    
T  39878406 tttcgtccctgtaatttcagattttttcacttttggtccctcatttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtg 39878307  T
Q  394 gaggaatctgaaatta 409  Q
    ||| ||||||||||||    
T  39878306 gagtaatctgaaatta 39878291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 409
Target Start/End: Original strand, 13284486 - 13284597
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggagg 397  Q
    ||||||||||||||||||||||||||||||  |||||||||  |||||| || ||||||||||||||||| ||||| |||||||||| |||||||| ||     
T  13284486 gtccctgtaatttcatattcttccacttttagtccctcatttcaccacgacaacagaatctgcatacatgacacgtgaaatgagggaccaaaagtgaaga 13284585  T
Q  398 aatctgaaatta 409  Q
    ||| ||||||||    
T  13284586 aatatgaaatta 13284597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 219 - 362
Target Start/End: Complemental strand, 17850965 - 17850822
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||||||||| ||||         | | ||||||| ||||||||||||||| |||||    
T  17850965 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattct 17850866  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcat 362  Q
    |||||||||| |||||| ||  | |||||||||| |||||||||    
T  17850865 tccacttttggtccctcttttcatcacgtcagcaaaatctgcat 17850822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 231 - 396
Target Start/End: Complemental strand, 13254803 - 13254638
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattcttccacttttga 329  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||          ||| || ||||  ||| |||||||||| |||||||||||||||     
T  13254803 tcttttcgtccctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaatttaatcc-tgtaatttcagattcttccacttttgg 13254705  T
Q  330 tccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggag 396  Q
    |||||||||  ||||| | ||||||||| | ||||||| |||||||||||||||| |||||||||||    
T  13254704 tccctcatttcaccacataagcagaatcagtatacatgacacgtaaaatgagggaccaaaagtggag 13254638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 33290426 - 33290238
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||| |||||  ||||| ||||||||||||||| ||||||| ||||||| |||||||          |  ||||||| | || ||||||||||||||||    
T  33290426 agggttaataccgcttttggtccctgtaatattagcgaattctggttttaatccctgtaaaaaaaa--aattagattttgaccttgtaatttcatattct 33290329  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| ||||| |||  |||||||||  | |||||||||||||||| | | |||||||||| |||||||||||| |||||||||||    
T  33290328 tccacttttggtccctaatttcaccacgtcaaaaaaatctgcatacatggctcatgaaatgagggaccaaaagtggaggtatctgaaatta 33290238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 356
Target Start/End: Original strand, 19251470 - 19251606
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||| ||||| |||||||||||||||||||||| |||||| ||||||||||||||||         ||| ||||||| |||||||||||||||||||||    
T  19251470 agggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattct 19251568  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaat 356  Q
    |||||||||| |||||| ||  | ||| ||||||||||    
T  19251569 tccacttttggtccctcctttcatcacatcagcagaat 19251606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 220 - 328
Target Start/End: Original strand, 23854688 - 23854796
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||| ||||| |||||||||||||||||||||| |||||| ||||||||||||||||         ||| ||||||| ||||||||||||||||||||||    
T  23854688 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23854787  T
Q  320 ccacttttg 328  Q
    |||||||||    
T  23854788 ccacttttg 23854796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 363
Target Start/End: Complemental strand, 22263572 - 22263426
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn--gatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||||||||||| ||||           |||  |||||| |||||||||||||||||||    
T  22263572 agggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatatt 22263473  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||||| |||||| ||  | |||||||||| ||||||||||    
T  22263472 cttccacttttggtccctcctttcatcacgtcagcataatctgcata 22263426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 363
Target Start/End: Complemental strand, 42671097 - 42670954
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||| ||||||||| ||||| |||||| | ||||||||||||||         ||| ||||||  ||||||||||||||||||| ||    
T  42671097 gggtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattttt 42670998  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||| |||||| ||  | |||||||||||||||||||||    
T  42670997 ccacttttggtccctcctttcatcacgtcagcagaatctgcata 42670954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 217 - 363
Target Start/End: Original strand, 26236124 - 26236270
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||  ||||||||||| |||||||||| ||||||| |||||||||||||||         ||| || |||| ||||||||||||||| |||    
T  26236124 ttagggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagatt 26236223  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||| |||||||| |||||| ||  | |||||||||||||| ||||||    
T  26236224 ctttcacttttggtccctcctttcatcacgtcagcagaatttgcata 26236270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 230 - 363
Target Start/End: Original strand, 26135827 - 26135960
Alignment:
Q  230 atcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttga 329  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||         ||| ||||||| ||||||||||||||| ||||||| |||||||     
T  26135827 atcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttgg 26135926  T
Q  330 tccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||| ||  | || |||| |||||||||||||    
T  26135927 tccctcctttcatcaagtcaacagaatctgcata 26135960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 363
Target Start/End: Original strand, 33290062 - 33290192
Alignment:
Q  233 ttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgatcc 332  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||          || ||||||  |||| |||||||||||| || |||||||||| |||    
T  33290062 ttttggtccctgtaatattagcgaattccagttttagtccctgtaaaataaaaaatttagattctgtccttgtaatttcatactcctccacttttggtcc 33290161  T
Q  333 ctcattcaaccacgtcagcagaatctgcata 363  Q
    || ||| ||||||||||||||||||||||||    
T  33290162 cttatttaaccacgtcagcagaatctgcata 33290192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 23854798 - 23854855
Alignment:
Q  352 agaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  23854798 agaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaatta 23854855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 363
Target Start/End: Original strand, 17463092 - 17463234
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||  ||||||||||||| |||||||| |||||||||||||||||| ||||          || ||||||| |||||||||||||||  ||||     
T  17463092 gggtaaatagttcttttcgtccctataatattagcgaattccggttttagtcgctgtaaaaaaaaaaat-tagattttgtccctgtaatttcaggttctc 17463190  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||| |||||||||  | || |||| |||||||||||||    
T  17463191 ccacttttggtccctcatttcatcaagtcaacagaatctgcata 17463234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 220 - 362
Target Start/End: Original strand, 15106067 - 15106209
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||  |||||||||||| ||||||||| |||||| |||||||| |||||||         ||| ||||||| ||||||||||||| | ||| ||    
T  15106067 gggtaaatatctcttttcgtccccgtaatattagcgaatttcggttttaatccctgtaaataaaaagatttagattttgtccctgtaattttagattatt 15106166  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcat 362  Q
    ||||||||| |||||| ||  | |||||||||  |||||||||    
T  15106167 ccacttttggtccctcctttcatcacgtcagctaaatctgcat 15106209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 217 - 363
Target Start/End: Original strand, 20498744 - 20498888
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| ||||||||||  |||||||||| |||||| ||||||||||||||||          || ||||||  |||||||| |||||| |||    
T  20498744 ttagggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgtaaaaaaaat-atttagattatgtccctgt-atttcagatt 20498841  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||||| |||||| ||  | |||||||| ||||||||||||    
T  20498842 cttccacttttggtccctccttttatcacgtcagtagaatctgcata 20498888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 219 - 361
Target Start/End: Complemental strand, 30960050 - 30959909
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||| |||||  ||||| ||||||||||||||| ||||||||||||||||||| |||         | | ||||||  ||||||||||||||||||||     
T  30960050 agggttaataccacttttggtccctgtaatattagcgaattccggttttagtccatgtaaaaaaaaagtt-tagattatgtccctgtaatttcatattcc 30959952  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgca 361  Q
    ||||||||| ||||||| || ||||  || |||||||||||||    
T  30959951 tccacttttaatccctcgtttaaccctgttagcagaatctgca 30959909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 23854974 - 23854901
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| ||| ||||||||| ||||||||||||||||| |||||| ||  | |||||||||||||||||||||    
T  23854974 tagattttgtctctgtaattttatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 23854901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 363
Target Start/End: Complemental strand, 26560932 - 26560789
Alignment:
Q  221 ggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatct-agatttcgtccctgtaatttcatattctt 319  Q
    ||||||||| ||||||||||| |||||||||| ||||||||| |||||||||| ||          |  | |||||| |||| | |||||||||||||||    
T  26560932 ggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtcccggtaaaaaaaaaaaaattagattttgtccatataatttcatattctt 26560833  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||| || ||| ||  | |||||||||||||||||||||    
T  26560832 ccacttttggtctctcctttcatcacgtcagcagaatctgcata 26560789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 370
Target Start/End: Original strand, 36359113 - 36359193
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggca 370  Q
    ||||||| |||| |||||| |||||| ||||||||||| |||||||||| || || ||||||||||||||  |||||||||    
T  36359113 tagattttgtccttgtaatatcatatacttccactttttatccctcattaaaacatgtcagcagaatctgtctacatggca 36359193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 23855072 - 23855025
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggtttt 267  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  23855072 gggtaaatacctcttttcgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 359
Target Start/End: Original strand, 34548574 - 34548712
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| ||||||||||||||||||||||  |||||  |||||||||||||||         ||| ||||||| |||| |||||||||||||| ||    
T  34548574 gggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgt-aaaaaaaagatttagattttgtccatgtaatttcatattgtt 34548672  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctg 359  Q
    |||| |||| || ||| ||  | |||||||| ||||||||    
T  34548673 ccacctttggtcactcctttcatcacgtcagtagaatctg 34548712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 13254494 - 13254605
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| ||||| ||| |||||||||||| ||||||  ||||||| |||||||         ||| ||||||| |||| |||||||||| |||    
T  13254494 ttagggtaaatacctctttccgttcctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcagatt 13254593  T
Q  317 cttccacttttg 328  Q
    ||| ||||||||    
T  13254594 ctttcacttttg 13254605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 12419101 - 12419046
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccct 274  Q
    ||||| |||||  ||||| ||||||||||||||| |||||||||||||||||||||    
T  12419101 agggttaataccacttttggtccctgtaatattagcgaattccggttttagtccct 12419046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 12431161 - 12431106
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccct 274  Q
    ||||| |||||  ||||| ||||||||||||||| |||||||||||||||||||||    
T  12431161 agggttaataccacttttggtccctgtaatattagcgaattccggttttagtccct 12431106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 23047962 - 23047904
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||||||||||| | |||||||||||||||||| | ||||||||||||||  |||||||    
T  23047962 tagggtaaatacctattttcgtccctgtaatatgagcgaattccggttttgctccctgt 23047904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 363
Target Start/End: Original strand, 23806021 - 23806095
Alignment:
Q  289 ctagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||| | ||||||||||| | ||||||||||||||| |||||| ||  | ||||||||||||||| |||||    
T  23806021 ctagattttgcccctgtaattttagattcttccacttttggtccctcctttcatcacgtcagcagaatccgcata 23806095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 363
Target Start/End: Complemental strand, 13284779 - 13284643
Alignment:
Q  232 cttttcgtccctgtaatattaacgaattccggttttagtccctg-----tnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttt 326  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||     |          |  ||||||| |||| |||||||||| |||| ||||||||    
T  13284779 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaataaaataaaataaatagattttgtccttgtaatttcagattcctccacttt 13284680  T
Q  327 tgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    || ||||||||| |||||||||| |||||||| ||||    
T  13284679 tggtccctcatttaaccacgtcaacagaatctacata 13284643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 23046705 - 23046754
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggtttt 267  Q
    |||||||||||| ||||||||||| |||||||| | ||||||||||||||    
T  23046705 tagggtaaatacctcttttcgtccttgtaatatgagcgaattccggtttt 23046754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 26236276 - 26236317
Alignment:
Q  297 cgtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  26236276 cgtccctgtaatttcatattcctccacttttggtccctcatt 26236317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 39878102 - 39878158
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||||||||| | |||| |||| |||||||||| |||||||||||||||||||||||    
T  39878102 agggtaaatacctttttt-gtccttgtaatattagcgaattccggttttagtccctgt 39878158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 15106249 - 15106289
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  15106249 gtccctgtaatttcagattcctccacttttgatccctcatt 15106289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 30958696 - 30958740
Alignment:
Q  232 cttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||||    
T  30958696 cttttggtccctgtaatattagcgaatttcggttttagtccctgt 30958740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 26560749 - 26560710
Alignment:
Q  299 tccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  26560749 tccctgtaatttcaaattcctccacttttgatccctcatt 26560710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 326
Target Start/End: Complemental strand, 44099000 - 44098894
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||  |||||||||||||||||||| | ||||||| |||||| || |||||          || ||||||  ||||||||||||||| ||||||    
T  44099000 gggtaaatatctcttttcgtccctgtaatatgagcgaattctggttttggttcctgtaaaaaaaataatttagattatgtccctgtaatttcagattctt 44098901  T
Q  320 ccacttt 326  Q
    |||||||    
T  44098900 ccacttt 44098894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 13284667 - 13284701
Alignment:
Q  375 aaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| ||||||||||||||||||||||||    
T  13284667 aaatgagggaccaaaagtggaggaatctgaaatta 13284701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 376 - 409
Target Start/End: Original strand, 15106327 - 15106360
Alignment:
Q  376 aatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||| |||||||||||||    
T  15106327 aatgagggatcaaaagtggaagaatctgaaatta 15106360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 338
Target Start/End: Complemental strand, 22263396 - 22263347
Alignment:
Q  289 ctagatttcgtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||| ||| ||||||||||||||| |||| |||||||||| |||||||||    
T  22263396 ctagttttggtccctgtaatttcaaattcctccacttttggtccctcatt 22263347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 21481013 - 21481053
Alignment:
Q  232 cttttcgtccctgtaatattaacgaattccggttttagtcc 272  Q
    ||||| |||| ||||||||||||||||||| ||||||||||    
T  21481013 cttttggtccttgtaatattaacgaattccagttttagtcc 21481053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 39878450 - 39878395
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||||||||| |||||| |||| |||||||||| |||||||| ||||| ||||||||    
T  39878450 gggtaaatacctctttttgtcc-tgtaatattagcgaattccagttttcgtccctgt 39878395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 44999354 - 44999398
Alignment:
Q  222 gtaaatacatcttttcgtccctgtaatattaacgaattccggttt 266  Q
    ||||||| |||||||||||| |||||||||| ||||||| |||||    
T  44999354 gtaaatatatcttttcgtccatgtaatattagcgaattctggttt 44999398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 7e-59; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 39711451 - 39711261
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||         ||| ||||||| ||||| |||||||||||||||    
T  39711451 agggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattct 39711352  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  39711351 tccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatccgaaatta 39711261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 39826049 - 39826239
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| ||||||||||| | |||||||| |||||| || |||||||||||||         ||| ||||||| ||||||||||||||| |||||    
T  39826049 agggtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 39826148  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39826149 tccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatatgaaatta 39826239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 4906961 - 4907151
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| ||||||||||||||||||||||  ||||||  ||||||||||||||         ||| ||||||| |||||||||||||||||||||    
T  4906961 agggtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattct 4907060  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||||| ||||||||||| |||||||||||||||||| |||||||||||||  ||||||||| |||||||||||||    
T  4907061 tccacttttggtccctcattccaccacgtcagccgaatctgcatacatggcatgtaaaatgagggactaaaagtggatgaatctgaaatta 4907151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 17606685 - 17606497
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||| |||| |||||||||| |||||    
T  17606685 agggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaa--gatttagattttgtccttgtaatttcagattct 17606588  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| ||||| |||| |||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  17606587 tccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaatta 17606497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 34749137 - 34749326
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||| |         ||| ||||||| ||||| |||||||||||||||    
T  34749137 agggtaaatacatcttttcatccctgtaatattagcgaattctgattttagtccctataaaaaaaa-gatttagattttgtccccgtaatttcatattct 34749235  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  34749236 tccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcatgtaaaatgagggaccaaaagtggaggaatctgaaatta 34749326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 217 - 409
Target Start/End: Original strand, 33628687 - 33628879
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| ||         ||| ||||||| ||||| ||||||||| |||    
T  33628687 ttagggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcagatt 33628786  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||| |||||||| |||||||||| ||||| | |||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  33628787 ctttcacttttggtccctcattccaccacataagcagaatttgcatacatggcacgtaaaatgagggaccaaaagtagaggaatctgaaatta 33628879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 48072342 - 48072150
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| ||||||||||  ||||||||||  |||||||||||||||||| |||          || ||||||  |||||||||||||||||||    
T  48072342 ttagggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtccttgtaaaaaaaaatatttagattatgtccctgtaatttcatatt 48072243  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||||||   |||||||  ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  48072242 cttccacttttgggtcctcatttcaccacgtcagcagaatctgcatacatgtcacgtaaaatgagggaccaaaagtggaggaatctgaaatta 48072150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 220 - 409
Target Start/End: Complemental strand, 30299609 - 30299420
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| | |||||||| ||||||||||| | |||| |||||||||| |||||         ||| ||||||| ||||||||||||| | ||||||    
T  30299609 gggtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagattctt 30299510  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| |||||||||| ||||||| || |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  30299509 ccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaatta 30299420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 52058011 - 52058200
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||  ||||         ||| |||| |  ||||||||||||||| ||||||    
T  52058011 gggtaaatacctcttttcgtccttgtaatattaacgaattccggttttagtttctgtaaaaaaaaagatttagactatgtccctgtaatttcagattctt 52058110  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| |||||||||  ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||||||    
T  52058111 ccacttttggtccctcatttcaccacatcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggagtaatatgaaatta 52058200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 239 - 409
Target Start/End: Original strand, 42510034 - 42510203
Alignment:
Q  239 tccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||||||||||||| ||||||||||||||| |||||||          || ||||||| ||||||||||||||||||||||||||||||  |||||||||    
T  42510034 tccctgtaatattagcgaattccggttttaatccctgtaaaaaaata-atttagattttgtccctgtaatttcatattcttccacttttagtccctcatt 42510132  T
Q  339 caaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
      ||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  42510133 tcaccacatcagcagaatctgcatacatggcacgtgaaatgagggaccaaaagtggaggaatctgaaatta 42510203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 39970645 - 39970835
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattct 318  Q
    |||||||||| ||||||||||| ||||||||||||||||| |  ||||| || ||||          ||| ||||||| |||  |||||||||| |||||    
T  39970645 gggtaaatacctcttttcgtccatgtaatattaacgaatttcaattttaatctctgtaaaaaaaaaagatttagattttgtctatgtaatttcagattct 39970744  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  39970745 tccacttttggtccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaagtggatgaatctgaaatta 39970835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 8293187 - 8292993
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattc 317  Q
    ||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||          ||| ||||||| ||||||||||||||||||||    
T  8293187 agggtaaatacctcttttcgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 8293088  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatca---aaagtggaggaatctgaaatta 409  Q
    ||||||||||| |||||||||| |||| |||||| |||||||||||||||||| | |||||||||||  |   ||||||||||||||| ||||||    
T  8293087 ttccacttttggtccctcattccaccatgtcagccgaatctgcatacatggcatgaaaaatgagggactaattaaagtggaggaatctaaaatta 8292993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 220 - 409
Target Start/End: Complemental strand, 24468002 - 24467817
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||||   | ||||||||||  ||||||||||||||||||||||         ||| ||||||| ||||||||||||||| ||||||    
T  24468002 gggtaaatacctcttttc---catgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 24467906  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||    
T  24467905 ccacttttggtccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatga-ggaccaaatgtggagtaatctgaaatta 24467817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 20996046 - 20995858
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||| ||||| |||||| ||||||||||||||| ||||||   |||||||||| |||         ||| ||||||| ||| |||||||||||||||||    
T  20996046 agggttaatacctctttttgtccctgtaatattagcgaattttagttttagtccatgtaaaaaaaa-gatttagattttgtctctgtaatttcatattct 20995948  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||||||||    
T  20995947 tccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgt-aaatgagggaccaaaagtggagaaatttgaaatta 20995858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 302 - 409
Target Start/End: Original strand, 7473874 - 7473981
Alignment:
Q  302 ctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatc 401  Q
    ||||||||||||||||||||||||||| |||||||||  |||||||||  |||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  7473874 ctgtaatttcatattcttccacttttggtccctcatttcaccacgtcaaaagaatctgcatacatggcacgtgaaatgatggatcaaaagtggaggaatc 7473973  T
Q  402 tgaaatta 409  Q
    ||||||||    
T  7473974 tgaaatta 7473981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 409
Target Start/End: Complemental strand, 13230024 - 13229920
Alignment:
Q  305 taatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctga 404  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  13230024 taatttcatcttcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgcaaaatgagggaccaaaagtggaggaatctga 13229925  T
Q  405 aatta 409  Q
    |||||    
T  13229924 aatta 13229920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 219 - 406
Target Start/End: Complemental strand, 29696936 - 29696755
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||   |||||||||| |||||||||||||||||| ||||          || ||||||| |||| |||||||||| |||||    
T  29696936 agggtaaatacctcttttcgtttatgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaat-tagattttgtccatgtaatttcagattct 29696838  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaa 406  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||     ||||||||||||||||| |||||||||||||||||||||    
T  29696837 tccacttttggtccctcattccaccacgtaagcagaatctgcat-----gcacgtaaaatgagggaccaaaagtggaggaatctgaaa 29696755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 231 - 409
Target Start/End: Complemental strand, 43539714 - 43539536
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgat 330  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||          |  | ||||| |||| |||||||||| ||||||||| ||||| |    
T  43539714 tcttttcgtccctgtaatattagcaaattccggttttagttcctgtaaaaaaaaaaaaattgattttgtccatgtaatttcaaattcttccagttttggt 43539615  T
Q  331 ccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||| |||| ||||||||||| ||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||||    
T  43539614 cccttattccaccacgtcagccgaatctgcatacatgacacgtaaaatgaggtaccaaaagtggaggaatttgaaatta 43539536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 18462663 - 18462474
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    |||| |||||| ||||||| |||||||||||||| | ||||||||||||||| | |||         ||| ||||||| ||||| ||||||||| |||||    
T  18462663 agggcaaatacctcttttcctccctgtaatattagcaaattccggttttagttcttgtataaaaaaagatttagattttgtccccgtaatttcagattct 18462564  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| || ||||||  ||||||||| |||||||||||||||||||||| ||||||| ||| |||| |||||| ||| ||||||||    
T  18462563 tccacttttggtctctcatttcaccacgtcaacagaatctgcatacatggcacgcaaaatga-ggaccaaacgtggagtaatatgaaatta 18462474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 220 - 363
Target Start/End: Original strand, 39711074 - 39711215
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| ||||||||||  |||||||||| |||||||||||||||||||||||         ||| ||||||| |||| |||||||||||||||||    
T  39711074 gggtaaatacctcttttcgtct-tgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccttgtaatttcatattctt 39711171  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||| |||||| || || |||||||||||||||||||||    
T  39711172 ccacttttggtccctcctttaatcacgtcagcagaatctgcata 39711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 220 - 363
Target Start/End: Original strand, 8292804 - 8292947
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||  |||||||||||||||| ||||| ||||| |||||||||||||||||         ||| ||||||| ||||||| ||||||||||||||    
T  8292804 gggtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatattctt 8292903  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||| | |||| ||  | |||||||||||||||||||||    
T  8292904 ccacttttggttcctcttttcatcacgtcagcagaatctgcata 8292947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 217 - 359
Target Start/End: Original strand, 17606301 - 17606447
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn----gatctagatttcgtccctgtaatttca 312  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||| |||||||||||||             ||| ||||||| || ||||||||||||    
T  17606301 ttaggataaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaaaagatttagattttgttcctgtaatttca 17606400  T
Q  313 tattcttccacttttgatccctcattcaaccacgtcagcagaatctg 359  Q
    |||||||||||||||| |||||||||  | |||||||||||||||||    
T  17606401 tattcttccacttttggtccctcatttcatcacgtcagcagaatctg 17606447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 363
Target Start/End: Complemental strand, 33629069 - 33628925
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||| ||||| |||||| ||||||||||||||| |||||||||||||||||||||||          |  | ||||| ||||||||||||||| |||||    
T  33629069 agggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagattct 33628970  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||| |||||| || || |||||||||||||||| ||||    
T  33628969 tccacttttggtccctcctttaatcacgtcagcagaatctacata 33628925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 363
Target Start/End: Complemental strand, 4907340 - 4907197
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||  | ||||| |||||||||||||| |||||||| ||||||||||||||         ||| ||||||| ||||||||||||||| ||||||    
T  4907340 gggtaaatatctattttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattctt 4907241  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||| |||||| ||  | |||||||| ||||||||||||    
T  4907240 ccacttttggtccctcctttcatcacgtcagtagaatctgcata 4907197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 18462285 - 18462400
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||| ||||||||||||||| |||||    
T  18462285 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcagattct 18462383  T
Q  319 tccacttttgatccctc 335  Q
    |||| ||||| ||||||    
T  18462384 tccatttttggtccctc 18462400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 24467628 - 24467743
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    |||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||         ||| ||||||| ||||||||||||||| |||||    
T  24467628 agggtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcagattct 24467726  T
Q  319 tccacttttgatccctc 335  Q
    |||||||||| ||||||    
T  24467727 tccacttttggtccctc 24467743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 363
Target Start/End: Complemental strand, 34749483 - 34749340
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||| ||| ||||||||||| ||||||||| ||||||||| |||         ||| |||||||  |||||||||||||| ||||||    
T  34749483 gggtaaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 34749384  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||| | |||| || || |||||||||||||||||||||    
T  34749383 ccacttttggtacctcctttaatcacgtcagcagaatctgcata 34749340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 220 - 328
Target Start/End: Complemental strand, 39826424 - 39826316
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| ||||||||||| |||||||||| |||||| ||||||||||||||||         ||| ||||||| ||||||||||||||| ||||||    
T  39826424 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 39826325  T
Q  320 ccacttttg 328  Q
    |||||||||    
T  39826324 ccacttttg 39826316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 344
Target Start/End: Complemental strand, 30252280 - 30252152
Alignment:
Q  218 tagggtaaatacatcttttc--gtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatat 315  Q
    |||||||||||| ||||| |  |||||| |||||||| ||||||| |||||||||||||||         ||| ||||||| ||||| ||||||||||||    
T  30252280 tagggtaaatacctctttccttgtccctataatattagcgaattctggttttagtccctgtaaaaataaagatttagattttgtccccgtaatttcatat 30252181  T
Q  316 tcttccacttttgatccctcattcaacca 344  Q
    ||||||| |||||||||||||||| ||||    
T  30252180 tcttccatttttgatccctcattccacca 30252152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 29696563 - 29696671
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||||| ||||         ||| ||||||| ||||| ||||||||||||||    
T  29696563 tagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgt-aaaaaaaagatttagattttgtccccgtaatttcatattc 29696661  T
Q  318 ttccactttt 327  Q
    ||||||||||    
T  29696662 ttccactttt 29696671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 363
Target Start/End: Complemental strand, 39971024 - 39970880
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt-nnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||          ||| ||||||| ||||||||||||| | || ||    
T  39971024 gggtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagatcct 39970925  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||| |||||  ||  | ||||||||||||||| |||||    
T  39970924 tccacttttggtcccttctttcatcacgtcagcagaatccgcata 39970880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 52058387 - 52058271
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| ||||||  ||||||||| |||||         ||| ||||||  ||||||||||||||| |||||    
T  52058387 agggtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattct 52058288  T
Q  319 tccacttttgatccctc 335  Q
    |||||||||| ||||||    
T  52058287 tccacttttggtccctc 52058271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 30299231 - 30299339
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| |||| | || ||||||||| |||         ||| ||||||| |||||||||||||||||||||    
T  30299231 agggtaaatacctcttttcgtccctgtaatattagcgaacttcgattttagtcc-tgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 30299329  T
Q  319 tccacttttg 328  Q
    ||||||||||    
T  30299330 tccacttttg 30299339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 356
Target Start/End: Complemental strand, 18342395 - 18342261
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| | |||||||||||||||||||| |||||| ||||||||||||||||          || || ||||  | | |||||||||||||||||    
T  18342395 gggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa--atttaaattttattcttgtaatttcatattctt 18342298  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaat 356  Q
    ||||||||  |||||||||| ||||||| ||||||||    
T  18342297 ccacttttagtccctcattccaccacgtaagcagaat 18342261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 363
Target Start/End: Original strand, 48071972 - 48072104
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgat 330  Q
    ||||||||| | |||||||||| ||||||| ||||||||| |||||         ||| ||||||| ||||||||||||||||||| ||||||||||| |    
T  48071972 tcttttcgttcatgtaatattagcgaattctggttttagttcctgtaataaaaaagatttagattttgtccctgtaatttcatattattccacttttgct 48072071  T
Q  331 ccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||| ||  | ||| |||||||||| ||||||    
T  48072072 ccctcctttcatcacatcagcagaatatgcata 48072104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 20995696 - 20995754
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||||||||||| ||||||| || ||||||||||| |||||||||||||||||||||||    
T  20995696 tagggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgt 20995754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 363
Target Start/End: Original strand, 43539349 - 43539490
Alignment:
Q  222 gtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttcc 321  Q
    |||||||  ||||||| ||| ||||| |||| | ||||||| ||||||||| |||         ||| ||||||| ||||||||||||| ||||| ||||    
T  43539349 gtaaatatctcttttcatccatgtaagattagcaaattccgattttagtccttgtaaaaaaaacgatttagattttgtccctgtaattttatattgttcc 43539448  T
Q  322 acttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| |||||| ||  | |||||||||||||||||||||    
T  43539449 acttttggtccctcctttcatcacgtcagcagaatctgcata 43539490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 16294255 - 16294182
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| |||| ||||||||||||||| |||||||||| ||||| ||| ||||| ||||||||||||| ||||    
T  16294255 tagattttgtccttgtaatttcatattcctccacttttggtcccttatttaaccatgtcagcagaatctacata 16294182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 30780356 - 30780303
Alignment:
Q  306 aatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctg 359  Q
    |||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  30780356 aatttcatattcctccacttttgatccttcattcaatcacgtcagcagaatctg 30780303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 27039635 - 27039690
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtcc 272  Q
    ||||||| ||||| |||||||||||||||||||| | |||||||||||||| ||||    
T  27039635 ttagggttaatacctcttttcgtccctgtaatatgagcgaattccggttttggtcc 27039690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 39826245 - 39826206
Alignment:
Q  299 tccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  39826245 tccctgtaatttcatattcctccacttttgatccctcatt 39826206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 361
Target Start/End: Complemental strand, 17502095 - 17501967
Alignment:
Q  232 cttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccacttttgatc 331  Q
    ||||| |||| |||||||||| ||||||||||||||||||||| |         | | ||||||  ||||||||||||||| |||| |||||||||  ||    
T  17502095 cttttggtccttgtaatattagcgaattccggttttagtccctataaaaaaaaagtt-tagattctgtccctgtaatttcagattcctccacttttagtc 17501997  T
Q  332 cctcattcaaccacgtcagcagaatctgca 361  Q
    |||| || ||||  ||||||||||||||||    
T  17501996 cctcgtttaaccctgtcagcagaatctgca 17501967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 363
Target Start/End: Original strand, 20995747 - 20995812
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||||||| |||||||| |||||||| |||||  ||  | |||||||||||||||||||||    
T  20995747 gtccctgtaattttatattctttcacttttggtcccttctttcatcacgtcagcagaatctgcata 20995812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 42510381 - 42510341
Alignment:
Q  232 cttttcgtccctgtaatattaacgaattccggttttagtcc 272  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  42510381 cttttggtccctgtaatattagcgaattccggttttagtcc 42510341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 13230110 - 13230059
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtc 271  Q
    |||||||||| |||||||||| ||| ||||||| |||||| |||||||||||    
T  13230110 gggtaaatacctcttttcgtctctgaaatattagcgaatttcggttttagtc 13230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 17500782 - 17500825
Alignment:
Q  233 ttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||    
T  17500782 ttttggtccctgtaatattagcgaattccggttttagtctctgt 17500825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 274
Target Start/End: Original strand, 37236729 - 37236772
Alignment:
Q  231 tcttttcgtccctgtaatattaacgaattccggttttagtccct 274  Q
    |||||| ||||||||||||| | |||||||||||||||||||||    
T  37236729 tcttttggtccctgtaatatgagcgaattccggttttagtccct 37236772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 363
Target Start/End: Complemental strand, 42510312 - 42510249
Alignment:
Q  300 ccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||| |||||||| |||||||||||| |  |||||||||  | |||||||||||||||||||||    
T  42510312 ccctataatttcagattcttccacttgtattccctcatttcatcacgtcagcagaatctgcata 42510249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 43400750 - 43400809
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||||| ||||| |||||||||| || |||||| | |||||||||||||| ||||||||    
T  43400750 ttagggttaatacctcttttcgtctctataatatgagcgaattccggttttggtccctgt 43400809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 215044 - 215101
Alignment:
Q  352 agaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| ||| ||||| ||||||  || ||||||||||||||||| ||||||    
T  215044 agaatctgcatatatgacacgtgaaatgaatgaccaaaagtggaggaatcttaaatta 215101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 376 - 409
Target Start/End: Complemental strand, 39826168 - 39826135
Alignment:
Q  376 aatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||| |||||||||||||    
T  39826168 aatgagggatcaaaagtggaagaatctgaaatta 39826135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 331
Target Start/End: Original strand, 13229815 - 13229843
Alignment:
Q  303 tgtaatttcatattcttccacttttgatc 331  Q
    |||||||||||||||||||||||||||||    
T  13229815 tgtaatttcatattcttccacttttgatc 13229843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 17606490 - 17606530
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  17606490 gtccctgtaatttcaaattcctccacttttggtccctcatt 17606530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 20995847 - 20995891
Alignment:
Q  294 tttcgtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||||||| |||  |||||||||| |||||||||    
T  20995847 tttcgtccctgtaatttcaaatttctccacttttggtccctcatt 20995891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 42510210 - 42510170
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  42510210 gtccctgtaatttcagattcctccacttttggtccctcatt 42510170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 113; Significance: 4e-57; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 4943 - 4752
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||||||||| |||||||         ||| ||||||| |||| ||||||||||||||    
T  4943 ttagggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgtaaaaataa-gatttagattttgtccttgtaatttcatatt 4845  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4844 cttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaatta 4752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 363
Target Start/End: Original strand, 4561 - 4706
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt-nnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    ||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||          ||| || |||| ||||||||||||| | ||||    
T  4561 agggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttgagattc 4660  T
Q  318 ttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||| ||||||| |||||| ||  | || |||| |||||||||||||    
T  4661 ttctacttttggtccctccttttatcaagtcaacagaatctgcata 4706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 4745 - 4785
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  4745 gtccctgtaatttcagattcctccacttttggtccctcatt 4785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 7e-56; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 220 - 409
Target Start/End: Original strand, 26385278 - 26385467
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||||||| ||||||||||| ||||||| ||||||||||| |||         ||| ||||||| ||||||||||||| ||||||||    
T  26385278 gggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatattctt 26385377  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26385378 ccacttttggtccctcattccaccacgtaagcagaatctgtatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaatta 26385467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 219 - 402
Target Start/End: Original strand, 18500314 - 18500496
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| ||||||||||||| |||||||| |||||| ||||||||||||||||         ||| ||||||| |||||||||||||||||||||    
T  18500314 agggtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgtaagaaaaa-gatttagattttgtccctgtaatttcatattct 18500412  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatct 402  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  18500413 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatct 18500496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 24732316 - 24732127
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||||||||||||||||| ||||||||  ||| |||||||||         ||| ||||||| |||| ||||||||||||||||    
T  24732316 agggtaaatacctcttttcgtccctgtaatattagcgaattccaattt-agtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatattct 24732218  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  24732217 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaatta 24732127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 223 - 409
Target Start/End: Original strand, 33714486 - 33714676
Alignment:
Q  223 taaatacatcttttcgtccctgtaatattaacgaattccggtttta--gtccctgtnnnnnnnnn--gatctagatttcgtccctgtaatttcatattct 318  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||           ||| ||||||| |||| ||||||||||||||||    
T  33714486 taaataaatcttttcgtccctgtaatattagcgaattccggttttatagtccctgtaaaaaaaaaaagatttagattttgtccttgtaatttcatattct 33714585  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  33714586 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaatta 33714676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 298 - 409
Target Start/End: Complemental strand, 33637828 - 33637716
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagt-ggag 396  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||||| ||||    
T  33637828 gtccctgtaatttcatattctttcacttttgatccctcattccaccacgtcagcagaatctgcatacataacacgtaaaatgagggaccaaaagtgggag 33637729  T
Q  397 gaatctgaaatta 409  Q
    |||||||||||||    
T  33637728 gaatctgaaatta 33637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 290 - 409
Target Start/End: Complemental strand, 30618269 - 30618150
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaa 389  Q
    ||||||| ||||||||||||| | ||||||||||||||  || || |||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  30618269 tagattttgtccctgtaattttagattcttccactttttgtctcttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggaccaaa 30618170  T
Q  390 agtggaggaatctgaaatta 409  Q
    ||||||||||| ||||||||    
T  30618169 agtggaggaatttgaaatta 30618150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 303 - 409
Target Start/End: Original strand, 32017619 - 32017725
Alignment:
Q  303 tgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatct 402  Q
    |||||||||| ||||||||||||||| ||| | |||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |    
T  32017619 tgtaatttcagattcttccacttttggtcctttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaattt 32017718  T
Q  403 gaaatta 409  Q
    |||||||    
T  32017719 gaaatta 32017725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 220 - 363
Target Start/End: Original strand, 9481182 - 9481325
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||  ||||||||||||||||||||||    
T  9481182 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattctt 9481281  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||| ||||| |||||| ||  | |||||||||||||||||||||    
T  9481282 ccaattttggtccctcctttcatcacgtcagcagaatctgcata 9481325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 409
Target Start/End: Original strand, 10321737 - 10321920
Alignment:
Q  224 aaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccac 323  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||           || ||||||   ||||||||||||||||||||| |||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattccggttttagtccctgaaaaaaaat--at-tagattatatccctgtaatttcatattcttacac 10321833  T
Q  324 ttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatga-gggatcaaaagtggaggaatctgaaatta 409  Q
    ||||| |||||||||  ||||||||||||| |||||||||||||||||||||||| | ||| | |||| ||||| ||||||||||||    
T  10321834 ttttgctccctcatttcaccacgtcagcagtatctgcatacatggcacgtaaaataaggggctaaaaattggagtaatctgaaatta 10321920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 223 - 409
Target Start/End: Original strand, 30458903 - 30459090
Alignment:
Q  223 taaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnn-gatctagatttcgtccctgtaatttcatattcttcc 321  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||| || ||          ||| ||||||  ||| ||||||||||| |||||||     
T  30458903 taaatacatcttttcgtccctgtaatattagtgaatttcggttttagttcccgtaaaaaaaaaagatttagattatgtcactgtaatttcagattcttca 30459002  T
Q  322 acttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||  || ||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||    
T  30459003 acttttagtctctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgagagatcaaaagtgaaataatctgaaatta 30459090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 298 - 409
Target Start/End: Original strand, 2299389 - 2299499
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggagg 397  Q
    ||||||||||||||| ||||||||||||||  |||||||||| ||||||| |||||||| || |||||||||||||||||||||||| ||||||||| ||    
T  2299389 gtccctgtaatttca-attcttccacttttagtccctcattccaccacgtaagcagaatatgtatacatggcacgtaaaatgagggaccaaaagtggcgg 2299487  T
Q  398 aatctgaaatta 409  Q
    ||||| ||||||    
T  2299488 aatctaaaatta 2299499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 290 - 409
Target Start/End: Complemental strand, 9481490 - 9481371
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaa 389  Q
    ||||||| |||| |||||||||| ||||||||||||||| ||||| |||| |||||||||||| ||| ||||||||||||||| |||||||||||  |||    
T  9481490 tagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgcaaaatgagggacaaaa 9481391  T
Q  390 agtggaggaatctgaaatta 409  Q
    | ||||||||| ||||||||    
T  9481390 aatggaggaatttgaaatta 9481371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 290 - 409
Target Start/End: Original strand, 14680952 - 14681071
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaa 389  Q
    ||||||| |||  |||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||||||||||| ||||| ||| ||| || ||||    
T  14680952 tagattttgtctttgtaatttcatattcttccacttttggtccttcatttcaccacgtcagcagaatctgcatacatgacacgtgaaaagagagaccaaa 14681051  T
Q  390 agtggaggaatctgaaatta 409  Q
    ||||||| ||||||||||||    
T  14681052 agtggagaaatctgaaatta 14681071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 219 - 363
Target Start/End: Complemental strand, 32017882 - 32017739
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||| |||||||||||||||||||||    
T  32017882 agggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattct 32017784  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||| |||||| ||  | ||||||||| |||| ||||||    
T  32017783 tccacttttggtccctcctttcatcacgtcagcggaatatgcata 32017739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 369
Target Start/End: Complemental strand, 9854264 - 9854116
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||| |||||  ||||| ||||||||||||||| ||||||| ||||||||||  |||          || ||||||| |||| ||||||||||||||||    
T  9854264 agggttaatactgctttttgtccctgtaatattagcgaattctggttttagtc--tgtaaaaataataatttagattttgtccttgtaatttcatattct 9854167  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggc 369  Q
    |||||||||| |||||||||  |||||||||||| ||||||||||||||||    
T  9854166 tccacttttggtccctcatttcaccacgtcagcaaaatctgcatacatggc 9854116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 24731933 - 24731991
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  24731933 tagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 24731991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 328
Target Start/End: Complemental strand, 26385649 - 26385544
Alignment:
Q  223 taaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttcca 322  Q
    ||||||| |||||||||||||||||||||| ||||||||| |||||||||||||         ||| ||||| | || |||| |||||||||||||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaacaaagatttagatgttgttcctgcaatttcatattcttcca 26385550  T
Q  323 cttttg 328  Q
    ||||||    
T  26385549 cttttg 26385544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 363
Target Start/End: Original strand, 30617966 - 30618105
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| ||||||||||||||||||||||  |||||| | ||||||||| |            || ||||||| ||||||||||||||||||| |    
T  30617966 agggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtcctt-----taaaaaaatttagattttgtccctgtaatttcatattgt 30618060  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||| |||||| ||  | |||||||||||||||||||||    
T  30618061 tccacttttggtccctccttttatcacgtcagcagaatctgcata 30618105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 335
Target Start/End: Original strand, 19284130 - 19284244
Alignment:
Q  221 ggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttc 320  Q
    ||||||||| ||||||||| | |||||||||| |||||||| ||||||||||  ||         ||| ||||||| ||||||||||||||| |||||||    
T  19284130 ggtaaatacctcttttcgttcatgtaatattagcgaattccagttttagtccacgtaaaataaaagatttagattttgtccctgtaatttcagattcttc 19284229  T
Q  321 cacttttgatccctc 335  Q
    |||||||| ||||||    
T  19284230 cacttttggtccctc 19284244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 18500709 - 18500655
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtcc 272  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||||||    
T  18500709 tagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 409
Target Start/End: Original strand, 3229992 - 3230052
Alignment:
Q  349 agcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||  || |||||||||||| ||||||||||||||| ||||||||    
T  3229992 agcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaatta 3230052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 2299694 - 2299635
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||||||||||  ||||||||| |||||||||||| ||||||||||||||||| |||||    
T  2299694 ttagggtaaatatctcttttcgttcctgtaatattagcgaattccggttttagttcctgt 2299635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 2299617 - 2299544
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| ||||||||||||||| |||||||||||||| ||||||| ||  | || |||| |||||||||||||    
T  2299617 tagattttgtccctgtaatttcagattcttccactttttatccctcctttcatcaagtcaacagaatctgcata 2299544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 328
Target Start/End: Original strand, 9154884 - 9154988
Alignment:
Q  225 aatacatcttttcgtccctgtaata-ttaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccac 323  Q
    ||||| ||||||| ||||||||||| ||| ||||||||| |||||||||||||         ||| ||||||| ||||||||||||||| |||||||||     
T  9154884 aatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccag 9154983  T
Q  324 ttttg 328  Q
    |||||    
T  9154984 ttttg 9154988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 2299339 - 2299396
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    ||||||||||  | ||||||||  |||||||||| |||||||||||||||||||||||    
T  2299339 agggtaaatattttttttcgtctatgtaatattagcgaattccggttttagtccctgt 2299396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 363
Target Start/End: Complemental strand, 10322031 - 10321966
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||||||||||| |||||| |||||||| ||| || ||  | |||||||||||||||||||||    
T  10322031 gtccctgtaatttcagattctttcacttttggtccttcctttcatcacgtcagcagaatctgcata 10321966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 21069527 - 21069570
Alignment:
Q  233 ttttcgtccctgtaatattaacgaattccggttttagtccctgt 276  Q
    |||| ||||||||||||| | |||||||||||||||||||||||    
T  21069527 ttttagtccctgtaatatgagcgaattccggttttagtccctgt 21069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 33637898 - 33637844
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtc 271  Q
    ||||||||||||| ||||||| ||  |||||||||| |||||| |||||||||||    
T  33637898 ttagggtaaatacctcttttcatctttgtaatattaccgaatttcggttttagtc 33637844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 24732008 - 24732053
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctc 335  Q
    ||||||| ||||||||||||||| ||||||| ||||||| ||||||    
T  24732008 tagattttgtccctgtaatttcagattcttctacttttggtccctc 24732053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 33637629 - 33637702
Alignment:
Q  290 tagatttcgtccctgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||||||| || | |||||||| | ||||||||||||||| |||||| ||  |  ||||||||||||||||||||    
T  33637629 tagattttgttcttgtaattttagattcttccacttttggtccctcctttcattacgtcagcagaatctgcata 33637702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 3230059 - 3230019
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||| ||||||||||||||| |||||||||| |||||||||    
T  3230059 gtccttgtaatttcatattcctccacttttggtccctcatt 3230019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 26385474 - 26385434
Alignment:
Q  298 gtccctgtaatttcatattcttccacttttgatccctcatt 338  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  26385474 gtccctgtaatttcagattcctccacttttggtccctcatt 26385434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 98; Significance: 4e-48; HSPs: 3)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 217 - 409
Target Start/End: Original strand, 3866 - 4058
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||         ||| ||||||  ||||||||||||||| |||    
T  3866 ttagggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaatt 3965  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||| ||| || ||||||  |||| |||||||||||||||| |||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  3966 cttccactgttggtcgctcatttcaccatgtcagcagaatctgcacacatggcaagtaaaatgagggaccaaaagtggaggaatatgaaatta 4058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 4061 - 4025
Alignment:
Q  302 ctgtaatttcatattcttccacttttgatccctcatt 338  Q
    |||||||||||||||| |||||||||| |||||||||    
T  4061 ctgtaatttcatattcctccacttttggtccctcatt 4025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 4164 - 4104
Alignment:
Q  303 tgtaatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||| |||||| || ||||| |||||| ||  | |||||||||||||||||||||    
T  4164 tgtaatttcagattctttcatttttggtccctcctttcatcacgtcagcagaatctgcata 4104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 91; Significance: 6e-44; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 220 - 409
Target Start/End: Complemental strand, 8700 - 8512
Alignment:
Q  220 gggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattctt 319  Q
    ||||||||||  ||||| || |||| ||||||| ||||||||||||||||||||| |         ||| ||||||| ||||||||||||| | ||||||    
T  8700 gggtaaatactgctttttgttcctgcaatattagcgaattccggttttagtccctttaaaaaaaaagatttagattttgtccctgtaattttagattctt 8601  T
Q  320 ccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||    
T  8600 ccacttttggtccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatga-ggaccaaaaatggaggaatctgaaatta 8512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 8322 - 8378
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccc 273  Q
    ||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  8322 ttagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccc 8378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 219 - 409
Target Start/End: Complemental strand, 1785 - 1599
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |          || ||||||  |||| |||||||||| |||||    
T  1785 agggtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtccctataaaaaaa---at-tagattatgtccttgtaatttcagattct 1690  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||| |||||||    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  1689 tccacttttggtccctcacatcaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatctgaaatta 1599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 363
Target Start/End: Original strand, 1410 - 1553
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| |||||||| ||| ||||||||  |||||| || |||||||||||||         ||| ||||||  ||||||||||||||| |||||    
T  1410 agggtaaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgtaaaaaaaa-gatttagattatgtccctgtaatttcagattct 1508  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||| |||||| ||  | |||||||||||||||| ||||    
T  1509 tccacttttggtccctcctttcatcacgtcagcagaatctacata 1553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 221 - 409
Target Start/End: Original strand, 7227 - 7420
Alignment:
Q  221 ggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttc 320  Q
    ||||||||| ||||||||||| |||||||||| ||||||| ||| ||||| |||||         ||| ||||||| |||||||||||||||||||||||    
T  7227 ggtaaatacctcttttcgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 7326  T
Q  321 cacttttgatccctcattcaaccacgtcagcagaat----ctgcatacatggcacgtaaaatgagggatcaaaagtgg-aggaatctgaaatta 409  Q
    |||||| | |||||||||| ||||||  |||| |||    |||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  7327 cactttcggtccctcattccaccacggaagcaaaatctgactgcatacatggtacgtaaaatgagggaccaaaagtggtaggaatctgaaatta 7420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 328
Target Start/End: Complemental strand, 7579 - 7469
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgt-nnnnnnnnngatctagatttcgtccctgtaatttcatattc 317  Q
    ||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||          ||| ||||||| ||||||||||||||| ||||    
T  7579 agggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 7480  T
Q  318 ttccacttttg 328  Q
    ||| |||||||    
T  7479 ttctacttttg 7469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 5125 - 4952
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    |||||||||||  |||||||||| |||||||||| |||||||||||||| ||||  ||          || ||||||| ||||||||||||| | |||||    
T  5125 agggtaaatacc-cttttcgtccatgtaatattagcgaattccggtttttgtcctagtaaaaaaaat-atttagatttagtccctgtaattttagattct 5028  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtgg 394  Q
    |||||||||| |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  5027 tccacttttggtccctcattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtgg 4952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 4877 - 4932
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtcc 272  Q
    ||||||||||||| |||||| || |||||||||||| |||||| ||||||||||||    
T  4877 ttagggtaaatacctctttttgttcctgtaatattagcgaatttcggttttagtcc 4932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 305 - 409
Target Start/End: Original strand, 305 - 409
Alignment:
Q  305 taatttcatattcttccacttttgatccctcattcaaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctga 404  Q
    |||||||| ||||||||||||||| |||||||||| ||||| | |||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  305 taatttcagattcttccacttttggtccctcattccaccacataagcagaatttgcatacatggtacgtaaaatgagggaccaaaagtagaggaatctga 404  T
Q  405 aatta 409  Q
    |||||    
T  405 aatta 409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 363
Target Start/End: Complemental strand, 596 - 454
Alignment:
Q  219 agggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattct 318  Q
    ||||||||||| ||||||  || ||| ||||||||||||||||||||||| |||||||         ||| ||||||| || |  ||||||||| ||| |    
T  596 agggtaaatacctctttttatctctggaatattaacgaattccggttttactccctgtaaaataaaagatttagattttgttc--gtaatttcagattat 499  T
Q  319 tccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    |||||||||| |  ||| || || ||| |||||||||||||||||    
T  498 tccacttttggtatctcctttaatcacatcagcagaatctgcata 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 225 - 364
Target Start/End: Complemental strand, 12355 - 12216
Alignment:
Q  225 aatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatattcttccact 324  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||| |         ||| ||||||| ||||||||||||||| |||||||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 12256  T
Q  325 tttgatccctcattcaaccacgtcagcagaatctgcatac 364  Q
    |||| ||| || ||  | ||||||||||||||||||||||    
T  12255 tttggtccatcctttcatcacgtcagcagaatctgcatac 12216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 363
Target Start/End: Complemental strand, 16009 - 15867
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnngatctagatttcgtccctgtaatttcatatt 316  Q
    ||||||||||||  ||||||||||| |||||||||| |||||||||||||||||| ||||          |   |||||| |||||||||||||||||||    
T  16009 ttagggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgtaaaaaa----aaaaagattttgtccctgtaatttcatatt 15914  T
Q  317 cttccacttttgatccctcattcaaccacgtcagcagaatctgcata 363  Q
    ||| |||||||| || ||| ||  | |||||||||||||||||||||    
T  15913 ctttcacttttggtctctcctttcatcacgtcagcagaatctgcata 15867  T

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Target: scaffold0352 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 335
Target Start/End: Complemental strand, 6059 - 5941
Alignment:
Q  218 tagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccctgtnnnnnnnnnga-tctagatttcgtccctgtaatttcatatt 316  Q
    |||||||||||| |||||| ||||||| ||||||| ||||||||| |||||||||||||          | | ||||||  ||||||||||||||| |||    
T  6059 tagggtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgtaaaaaaaaaaagtttagattctgtccctgtaatttcagatt 5960  T
Q  317 cttccacttttgatccctc 335  Q
    | |||||||||||||||||    
T  5959 cctccacttttgatccctc 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 4664 - 4721
Alignment:
Q  217 ttagggtaaatacatcttttcgtccctgtaatattaacgaattccggttttagtccct 274  Q
    ||||||||||||| |||||| ||||||| ||||||| |||||||| ||||||||||||    
T  4664 ttagggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtccct 4721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 409
Target Start/End: Original strand, 5941 - 5971
Alignment:
Q  379 gagggatcaaaagtggaggaatctgaaatta 409  Q
    |||||||||||||||||||||||||||||||    
T  5941 gagggatcaaaagtggaggaatctgaaatta 5971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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