View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14784_low_41 (Length: 373)
Name: NF14784_low_41
Description: NF14784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14784_low_41 |
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Alignment Details
Target: chr5 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 43 - 357
Target Start/End: Original strand, 5113968 - 5114282
Alignment:
| Q |
43 |
acaagctcgccgagttagcaacatgaaacaagagatgaaaagagaaacaaatcagaatttgatgatggcggcttcgggtgtcaatagtatgagttcagct |
142 |
Q |
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| T |
5113968 |
acaagctcgccgagttagcaacatgaaacaagagatgaaaagagaaacaaatcagaatttgatgatggcggctttgggtgtcaatagtatgagttcagca |
5114067 |
T |
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| Q |
143 |
ccttattggcctgcagagtattctgttcatcctatgccagtttcaaattcatccataattgattatgatacgaacaatcaaacatccttcacaagtttaa |
242 |
Q |
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| T |
5114068 |
ccatattggcctgcagagtattctgttcatcctatgccagtttcaaattcatccataattgattatgatacgaacaatcaaacatccttcacaagtttaa |
5114167 |
T |
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| Q |
243 |
tgaacattccaaaccctttttccatggtgagtaatacaattacaaacaatggtggaaattgccaaccatcacatatatttcaagggtttgaaaattttcc |
342 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5114168 |
tgaacattccaaaccctttttccatggtgagtaatacaattacaaacaatggtggaaattgccaaccatcacatatatttcaagggtttgaaaattttcc |
5114267 |
T |
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| Q |
343 |
aagggatttaagtga |
357 |
Q |
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||||||||||||||| |
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| T |
5114268 |
aagggatttaagtga |
5114282 |
T |
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