View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14784_low_63 (Length: 301)

Name: NF14784_low_63
Description: NF14784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14784_low_63
NF14784_low_63
[»] chr7 (15 HSPs)
chr7 (24-212)||(14797020-14797208)
chr7 (24-212)||(15244012-15244200)
chr7 (50-207)||(14634187-14634338)
chr7 (215-284)||(18973677-18973746)
chr7 (213-284)||(7570625-7570696)
chr7 (213-284)||(7577040-7577111)
chr7 (223-284)||(6374761-6374822)
chr7 (223-279)||(232019-232075)
chr7 (212-256)||(44672786-44672830)
chr7 (213-256)||(1636692-1636735)
chr7 (212-270)||(140189-140247)
chr7 (213-256)||(1633447-1633490)
chr7 (221-256)||(5189463-5189498)
chr7 (220-256)||(20436977-20437013)
chr7 (213-273)||(27796965-27797025)
[»] chr1 (9 HSPs)
chr1 (52-206)||(26269686-26269849)
chr1 (223-284)||(28957300-28957361)
chr1 (217-256)||(25662854-25662893)
chr1 (213-256)||(28138603-28138646)
chr1 (213-256)||(28141853-28141896)
chr1 (213-256)||(1944184-1944227)
chr1 (213-256)||(21911039-21911082)
chr1 (219-256)||(14159063-14159100)
chr1 (221-282)||(45532357-45532417)
[»] scaffold0086 (1 HSPs)
scaffold0086 (213-284)||(24224-24295)
[»] chr5 (6 HSPs)
chr5 (213-284)||(31375905-31375976)
chr5 (213-284)||(20473359-20473430)
chr5 (213-256)||(22036170-22036213)
chr5 (215-256)||(22039396-22039437)
chr5 (213-280)||(7290322-7290388)
chr5 (213-256)||(43103655-43103698)
[»] chr3 (11 HSPs)
chr3 (213-283)||(17544573-17544643)
chr3 (213-284)||(23049255-23049326)
chr3 (211-269)||(28716499-28716557)
chr3 (213-282)||(19194020-19194095)
chr3 (213-282)||(6732152-6732220)
chr3 (213-282)||(6765024-6765092)
chr3 (213-282)||(53190049-53190117)
chr3 (213-256)||(10557802-10557845)
chr3 (213-282)||(9237870-9237938)
chr3 (213-281)||(30157797-30157866)
chr3 (213-241)||(33672487-33672515)
[»] chr8 (8 HSPs)
chr8 (213-256)||(2847580-2847623)
chr8 (213-282)||(33383640-33383715)
chr8 (213-282)||(29354583-29354651)
chr8 (221-282)||(5952406-5952473)
chr8 (223-287)||(8855083-8855147)
chr8 (223-279)||(10649606-10649662)
chr8 (213-256)||(15928458-15928501)
chr8 (231-271)||(40955126-40955166)
[»] chr6 (4 HSPs)
chr6 (213-256)||(965071-965114)
chr6 (213-256)||(17733248-17733291)
chr6 (213-281)||(12488857-12488924)
chr6 (213-241)||(15393920-15393948)
[»] scaffold0005 (1 HSPs)
scaffold0005 (213-282)||(199633-199701)
[»] chr4 (3 HSPs)
chr4 (213-282)||(14617676-14617744)
chr4 (213-256)||(25186356-25186399)
chr4 (222-256)||(54900089-54900123)
[»] chr2 (9 HSPs)
chr2 (215-256)||(16881605-16881646)
chr2 (215-256)||(17039295-17039336)
chr2 (213-256)||(35077228-35077271)
chr2 (213-256)||(35080486-35080529)
chr2 (214-256)||(6276923-6276965)
chr2 (213-282)||(27195653-27195721)
chr2 (213-282)||(27499543-27499611)
chr2 (213-256)||(33749731-33749774)
chr2 (213-257)||(6298766-6298810)
[»] scaffold0146 (2 HSPs)
scaffold0146 (210-266)||(446-501)
scaffold0146 (213-256)||(36151-36194)
[»] scaffold0884 (1 HSPs)
scaffold0884 (213-256)||(4289-4332)
[»] scaffold0012 (1 HSPs)
scaffold0012 (211-256)||(157409-157454)
[»] scaffold0500 (1 HSPs)
scaffold0500 (213-266)||(2884-2936)
[»] scaffold0063 (1 HSPs)
scaffold0063 (213-266)||(6995-7047)


Alignment Details
Target: chr7 (Bit Score: 141; Significance: 6e-74; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 24 - 212
Target Start/End: Original strand, 14797020 - 14797208
Alignment:
Q  24 gtacatcaaaaaacaaatggtagttgatacaactactgtgtagatcttgtagatagttctccccaagacttcatcaatttaaggcaggcaccaagaacag 123  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14797020 gtacatcaaaaaacaaatggcagtcaatacaactactgtgtagatcttgtagatagttctccccaaggcttcatcaatttaaggcaggcaccaagaacag 14797119  T
Q  124 gtactttagcaggaacagcagcaacactctcttgggttataacaccagtttcttcctcattatcaattgttataggttgatcagtagag 212  Q
    |||||||||||||||||  |||| ||||||||||||| || ||||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  14797120 gtactttagcaggaacaatagcagcactctcttgggtcatgacaccagcttcttcctcattatcaattgtcataggttgatcagcagag 14797208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 24 - 212
Target Start/End: Original strand, 15244012 - 15244200
Alignment:
Q  24 gtacatcaaaaaacaaatggtagttgatacaactactgtgtagatcttgtagatagttctccccaagacttcatcaatttaaggcaggcaccaagaacag 123  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15244012 gtacatcaaaaaacaaatggcagtcaatacaactactgtgtagatcttgtagatagttctccccaaggcttcatcaatttaaggcaggcaccaagaacag 15244111  T
Q  124 gtactttagcaggaacagcagcaacactctcttgggttataacaccagtttcttcctcattatcaattgttataggttgatcagtagag 212  Q
    |||||||||||||||||  |||| ||||||||||||| || ||||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  15244112 gtactttagcaggaacaatagcagcactctcttgggtcatgacaccagcttcttcctcattatcaattgtcataggttgatcagcagag 15244200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 50 - 207
Target Start/End: Complemental strand, 14634338 - 14634187
Alignment:
Q  50 atacaactactgtgtagatcttgtagatagttctccccaagacttcatcaatttaaggcaggcaccaagaacaggtactttagcaggaacagcagcaaca 149  Q
    |||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14634338 atacaactactgtgtagatcttgtagatagttctccc------ttcatcaatttaaggcaggcaccaagaacaggtactttagcaggaacagcagcagca 14634245  T
Q  150 ctctcttgggttataacaccagtttcttcctcattatcaattgttataggttgatcag 207  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||    
T  14634244 ctctcttgggtcataacaccagcttcttcctcattatcaattgtcataggttgatcag 14634187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 18973677 - 18973746
Alignment:
Q  215 atagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgttct 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18973677 atagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacagggactgttct 18973746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 7570696 - 7570625
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgttct 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  7570696 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtattcacagggactgttct 7570625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 7577111 - 7577040
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgttct 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  7577111 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtattcacagggactgttct 7577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 6374822 - 6374761
Alignment:
Q  223 ttagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgttct 284  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  6374822 ttagcaagtatactaatttatatcgaagtaataatttaattcgtatccaaagggactgttct 6374761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 232075 - 232019
Alignment:
Q  223 ttagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggact 279  Q
    ||||||||||||||||||||| || ||| ||||||| |||| |||||||||||||||    
T  232075 ttagcaagtgtactaatttatttcaaagcaataattaaatttgtatccacaaggact 232019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 44672786 - 44672830
Alignment:
Q  212 gtgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    |||||||| |||||||||||||||||| |||||||||||||||||    
T  44672786 gtgatagataattagcaagtgtactaacttatatcgaagtaataa 44672830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 1636692 - 1636735
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  1636692 tgatagataattagcaagtgtactaacttatatcgaagtaataa 1636735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 140189 - 140247
Alignment:
Q  212 gtgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatcc 270  Q
    |||||| ||||||||||||||| |||| ||||||| ||||||||| | |||||||||||    
T  140189 gtgatacaaaattagcaagtgttctaacttatatcaaagtaataaataaattcgtatcc 140247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 1633447 - 1633490
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||| ||||||||||||||| || |||||||||||||||||    
T  1633447 tgatagataattagcaagtgtaccaacttatatcgaagtaataa 1633490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 256
Target Start/End: Original strand, 5189463 - 5189498
Alignment:
Q  221 aattagcaagtgtactaatttatatcgaagtaataa 256  Q
    |||||||||||||||||| |||||||||||||||||    
T  5189463 aattagcaagtgtactaacttatatcgaagtaataa 5189498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 20437013 - 20436977
Alignment:
Q  220 aaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    |||||| |||||||||||| |||||||||||||||||    
T  20437013 aaattaacaagtgtactaacttatatcgaagtaataa 20436977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 27797025 - 27796965
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccaca 273  Q
    ||||| ||||||||||||| |||||| |||||  |||||||||| | ||||| ||||||||    
T  27797025 tgatacaaaattagcaagtatactaacttatactgaagtaataaataaattcatatccaca 27796965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 7e-52; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 52 - 206
Target Start/End: Complemental strand, 26269849 - 26269686
Alignment:
Q  52 acaactactgtgtagatcttgtagatagttctccccaagacttcatcaatttaaggcaggcaccaag---------aacaggtactttagcaggaacagc 142  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||         ||||||||||||||||||||||||    
T  26269849 acaactactgtgtagatcttgtagatatttctccccaagacttcatcaagttaaggcagccaccaagtctggcaacaacaggtactttagcaggaacagc 26269750  T
Q  143 agcaacactctcttgggttataacaccagtttcttcctcattatcaattgttataggttgatca 206  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||||||| ||||||||||||    
T  26269749 agcaacactctcttgggtcataacaccagctacttcctcattatcaattgtcataggttgatca 26269686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 28957361 - 28957300
Alignment:
Q  223 ttagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgttct 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28957361 ttagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacagggactgttct 28957300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 25662854 - 25662893
Alignment:
Q  217 agaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  25662854 agaaaattagcaagtgtactaacttatatcgaagtaataa 25662893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 28138603 - 28138646
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  28138603 tgatagataattagcaagtgtactaacttatatcgaagtaataa 28138646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 28141853 - 28141896
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  28141853 tgatagataattagcaagtgtactaacttatatcgaagtaataa 28141896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 1944227 - 1944184
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||    
T  1944227 tgatagaaaattaacaagtgtactaacttatatcgaactaataa 1944184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 21911039 - 21911082
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||    
T  21911039 tgatacaaaattagcaagtgtactaacttatatcgaagaaataa 21911082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 14159063 - 14159100
Alignment:
Q  219 aaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  14159063 aaaattaacaagtgtactaacttatatcgaagtaataa 14159100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 45532357 - 45532417
Alignment:
Q  221 aattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgtt 282  Q
    |||||||||||||||||||||| |||| ||||||||  |||||| | ||| |||||||||||    
T  45532357 aattagcaagtgtactaatttaaatcg-agtaataaaataattcatttccccaaggactgtt 45532417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 24295 - 24224
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgttct 284  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24295 tgatagaaaattagcaagtgtattaatttatatcgaagtaataatttaattcgtatccacaaggactgttct 24224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 31375976 - 31375905
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgttct 284  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31375976 tgatacaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgttct 31375905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 20473359 - 20473430
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgttct 284  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  20473359 tgatagaaaattagcaagtgcactaatttatatcgaagtaataatttaattcatatccacagggactgttct 20473430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 22036213 - 22036170
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  22036213 tgatagataattagcaagtgtactaacttatatcgaagtaataa 22036170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 22039437 - 22039396
Alignment:
Q  215 atagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  22039437 atagataattagcaagtgtactaacttatatcgaagtaataa 22039396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 7290388 - 7290322
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactg 280  Q
    |||||||||||||||||||||||||||||  |||| ||||||||  |||||||| ||| || ||||||    
T  7290388 tgatagaaaattagcaagtgtactaatttgaatcg-agtaataaaataattcgtttcctcagggactg 7290322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 43103655 - 43103698
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    |||| |||||||||||| |||||||| |||||||||||||||||    
T  43103655 tgatggaaaattagcaattgtactaacttatatcgaagtaataa 43103698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 17544573 - 17544643
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgttc 283  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17544573 tgatacaaaattagcaagtgtactaatttatatcgaagtaataatttaatttgtatccacaaggactgttc 17544643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 23049326 - 23049255
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgttct 284  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  23049326 tgatacaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacagggactattct 23049255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 28716499 - 28716557
Alignment:
Q  211 agtgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatc 269  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  28716499 agtgatacaaaattagcaaatgtactaatttatgtcgaagtaataatataattcgtatc 28716557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 19194095 - 19194020
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaat--aattta----attcgtatccacaaggactgtt 282  Q
    |||||||||||| ||||||||||||| |||||||||||||||  ||||||    ||||||||||||||||||||||    
T  19194095 tgatagaaaatttgcaagtgtactaacttatatcgaagtaataaaatttataagattcgtatccacaaggactgtt 19194020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 6732220 - 6732152
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgtt 282  Q
    |||||||||||||||||||||||||||||  |||| |||||||| ||||||||| ||| || ||||||||    
T  6732220 tgatagaaaattagcaagtgtactaatttgaatcg-agtaataaattaattcgtttcctcagggactgtt 6732152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 6765024 - 6765092
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgtt 282  Q
    |||||||||||||||||||||||||||||  |||| |||||||| ||||||||| ||| || ||||||||    
T  6765024 tgatagaaaattagcaagtgtactaatttgaatcg-agtaataaattaattcgtttcctcagggactgtt 6765092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 53190117 - 53190049
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgtt 282  Q
    |||||||||||||||||||||||||||||  |||| |||||||| ||||||||| ||| || ||||||||    
T  53190117 tgatagaaaattagcaagtgtactaatttgaatcg-agtaataaattaattcgtttcctcagggactgtt 53190049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 10557802 - 10557845
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  10557802 tgatagataattagcaagtgtactaacttatatcgaagtaataa 10557845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 9237938 - 9237870
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgtt 282  Q
    |||||||||||||||||||||||||||||  |||| ||||||||  ||||| || ||| || ||||||||    
T  9237938 tgatagaaaattagcaagtgtactaatttgaatcg-agtaataaaataatttgtttcctcagggactgtt 9237870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 30157797 - 30157866
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaa-ttcgtatccacaaggactgt 281  Q
    ||||||||| || |||||||||| |||   |||||||||||||| |||| ||||||||||| ||||||||    
T  30157797 tgatagaaatttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggactgt 30157866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 241
Target Start/End: Complemental strand, 33672515 - 33672487
Alignment:
Q  213 tgatagaaaattagcaagtgtactaattt 241  Q
    |||||||||||||||||||||||||||||    
T  33672515 tgatagaaaattagcaagtgtactaattt 33672487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 2847580 - 2847623
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  2847580 tgatagaaaattagcaagtgtactaacttatatcgaagtaataa 2847623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 33383715 - 33383640
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaata--attta----attcgtatccacaaggactgtt 282  Q
    |||||||||||||||||||||||||| |||||| |||||||||  |||||    ||||||||||||||||||||||    
T  33383715 tgatagaaaattagcaagtgtactaacttatatggaagtaataatatttataagattcgtatccacaaggactgtt 33383640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 29354651 - 29354583
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgtt 282  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||  |||||||| |||||| ||||||||    
T  29354651 tgatagaaaattagcaagtatactaatttaactcgaagtaataa-ataattcgtttccacacggactgtt 29354583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 5952473 - 5952406
Alignment:
Q  221 aattagcaagtgtactaatttatatcgaagtaat--aattta----attcgtatccacaaggactgtt 282  Q
    |||||||||||||||||| |||||||||||||||  ||||||    ||||||||||||||||||||||    
T  5952473 aattagcaagtgtactaacttatatcgaagtaataaaatttataagattcgtatccacaaggactgtt 5952406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 8855083 - 8855147
Alignment:
Q  223 ttagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgttctgat 287  Q
    ||||||||| || ||||||||| |||||||||||||||||| ||||| || |||| |||| ||||    
T  8855083 ttagcaagtttattaatttataccgaagtaataatttaatttgtatctacgaggattgttatgat 8855147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 10649662 - 10649606
Alignment:
Q  223 ttagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggact 279  Q
    |||||| || |||||||||| ||| ||||||||||| |||| |||||||||||||||    
T  10649662 ttagcatgtatactaatttaaatcaaagtaataattaaatttgtatccacaaggact 10649606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 15928458 - 15928501
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||    
T  15928458 tgatagaaaactagcaagtgaactaatttaaatcgaagtaataa 15928501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 40955126 - 40955166
Alignment:
Q  231 tgtactaatttatatcgaagtaataatttaattcgtatcca 271  Q
    |||||||||||||||| ||||||||||| |||| |||||||    
T  40955126 tgtactaatttatatccaagtaataattaaatttgtatcca 40955166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 965114 - 965071
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  965114 tgatagaaaattagcaagtgtactaacttatatcgaagtaataa 965071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 17733248 - 17733291
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  17733248 tgatagaaaattagcaagtgtactaacttatatcgaagtaataa 17733291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 12488857 - 12488924
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgt 281  Q
    ||||||| |||||||||||||| ||||||| |||| ||||||||  |||||||| ||| || |||||||    
T  12488857 tgatagataattagcaagtgtattaatttaaatcg-agtaataaaataattcgtttcctcatggactgt 12488924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 241
Target Start/End: Original strand, 15393920 - 15393948
Alignment:
Q  213 tgatagaaaattagcaagtgtactaattt 241  Q
    |||||||||||||||||||||||||||||    
T  15393920 tgatagaaaattagcaagtgtactaattt 15393948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 199633 - 199701
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgtt 282  Q
    |||||||||||||||||||||||||||||  |||| |||||||| ||||||||| ||| || ||||||||    
T  199633 tgatagaaaattagcaagtgtactaatttgaatcg-agtaataaattaattcgtttcctcagggactgtt 199701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 14617744 - 14617676
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgtt 282  Q
    |||||||||||||||||||||||||||||  |||| |||||||| ||||||||| ||| || ||||||||    
T  14617744 tgatagaaaattagcaagtgtactaatttgaatcg-agtaataaattaattcgtttcctcagggactgtt 14617676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 25186399 - 25186356
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  25186399 tgatagaaaattagcaagtgaactaatttaaatcgaagtaataa 25186356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 256
Target Start/End: Complemental strand, 54900123 - 54900089
Alignment:
Q  222 attagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||||||||||||| |||||||||||||||||    
T  54900123 attagcaagtgtactaacttatatcgaagtaataa 54900089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 16881646 - 16881605
Alignment:
Q  215 atagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  16881646 atagaaaattagcaagtgtactaacttatatcgaagtaataa 16881605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 17039336 - 17039295
Alignment:
Q  215 atagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  17039336 atagaaaattagcaagtgtactaacttatatcgaagtaataa 17039295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 35077271 - 35077228
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  35077271 tgatagataattagcaagtgtactaacttatatcgaagtaataa 35077228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 35080529 - 35080486
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  35080529 tgatagataattagcaagtgtactaacttatatcgaagtaataa 35080486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 6276923 - 6276965
Alignment:
Q  214 gatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    |||| |||||||||||||||||||| |||||||||||||||||    
T  6276923 gataaaaaattagcaagtgtactaacttatatcgaagtaataa 6276965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 27195653 - 27195721
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgtt 282  Q
    |||||||||||||||||||||||||||||  |||| ||||||||  |||||||| ||| || ||||||||    
T  27195653 tgatagaaaattagcaagtgtactaatttgaatcg-agtaataaaataattcgtttcctcagggactgtt 27195721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 27499611 - 27499543
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgtatccacaaggactgtt 282  Q
    |||||||||||||||||||||||||| ||  |||| |||||||| ||||||||| ||| || ||||||||    
T  27499611 tgatagaaaattagcaagtgtactaaattgaatcg-agtaataaattaattcgtttcctcagggactgtt 27499543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 33749774 - 33749731
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||| ||| |||||||||||||||| |||||||||||||||||    
T  33749774 tgatacaaatttagcaagtgtactaacttatatcgaagtaataa 33749731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 6298810 - 6298766
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataat 257  Q
    ||||||| | ||| |||||||||||| ||||||||||||||||||    
T  6298810 tgatagatatttaacaagtgtactaaattatatcgaagtaataat 6298766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 446 - 501
Alignment:
Q  210 gagtgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgt 266  Q
    ||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  446 gagtgatagaaaattagcaagtgtactaatttgaatcg-agtaataaattaattcgt 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 36194 - 36151
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||| ||||| |||||||||||| |||||||||||||||||    
T  36194 tgatagataattatcaagtgtactaacttatatcgaagtaataa 36151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 4289 - 4332
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  4289 tgatagataattagcaagtgtactaacttatatcgaagtaataa 4332  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 157454 - 157409
Alignment:
Q  211 agtgatagaaaattagcaagtgtactaatttatatcgaagtaataa 256  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||||    
T  157454 agtgatacaaaattagcaaatgtactaacttatatcgaagtaataa 157409  T

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Target: scaffold0500 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 2936 - 2884
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgt 266  Q
    |||||||||||||||||||||||||||||  |||| ||||||||  ||||||||    
T  2936 tgatagaaaattagcaagtgtactaatttgaatcg-agtaataaaataattcgt 2884  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 6995 - 7047
Alignment:
Q  213 tgatagaaaattagcaagtgtactaatttatatcgaagtaataatttaattcgt 266  Q
    |||||||||||||||||||||||||||||  |||| ||||||||  ||||||||    
T  6995 tgatagaaaattagcaagtgtactaatttgaatcg-agtaataaaataattcgt 7047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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