View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14785_high_5 (Length: 312)
Name: NF14785_high_5
Description: NF14785
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14785_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 17 - 306
Target Start/End: Original strand, 39631394 - 39631684
Alignment:
| Q |
17 |
caccagatatgaatgaattatgataccacgcaaatctttctgacttattcagaattaaaaagggagcaaaagatttccaaaaccttgacaatatatgcct |
116 |
Q |
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| T |
39631394 |
caccagatatgaatgaattatgataccactcaaatctttctgacttattcagaattaaaaagggagcaaaagatttccaaaaccttgacaatatatgcct |
39631493 |
T |
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| Q |
117 |
ttgaaacttgtttaactcataacttaaggtatgtacaactaatcttaatactataattgattaaa-tactgatggctgatcatcttttgtttattgatta |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
39631494 |
ttgaaacttgtttaactcataacttaaggtatgtacaactaatcttaatactataattgattaaattactgatggctgatcatcttttgtttattgatta |
39631593 |
T |
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| Q |
216 |
aacgtacgtggcatcttaatctccccgaaatgttaaagctcattcaaacaaattgttannnnnnnnaatatttctagtggcataatattct |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
39631594 |
aacgtacgtggcatcttaatctccccgaaatgttaaagctcattcaaacaaattgttattttttttaatatttctagtggcataatattct |
39631684 |
T |
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