View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1478_high_12 (Length: 304)
Name: NF1478_high_12
Description: NF1478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1478_high_12 |
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Alignment Details
Target: chr6 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 288
Target Start/End: Original strand, 14943937 - 14944202
Alignment:
| Q |
16 |
ttgtcatcacctcttttgacgtcgcacaatgcacaatggacaatgcacaattttcctgaagctatcttcatctacacattgatgaattcacaaaagggct |
115 |
Q |
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| T |
14943937 |
ttgtcatcacctcttttgacgtcgcacaatgcacaa-------tgcacaattttcctgaagctatcttcatctacacattgatgaattcacaaaagggct |
14944029 |
T |
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| Q |
116 |
ttgttgtctttcctttctaatcaagcatatatttatacgtggaaatcaccttcatttgcactatcaaacgttcgtaannnnnnnccctttatcactggta |
215 |
Q |
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| T |
14944030 |
ttgttgtctttcctttctaatcaagcatatatttatacgtggaaatcaccttcatttgcactatcaaacgttcgtaatttttttccctttatcactggta |
14944129 |
T |
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| Q |
216 |
gtcgcaaggaaatttccattgatgctagttgaagcaaccatgaatcttgcaaaaccttggttctgttatacca |
288 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14944130 |
gtcgcaaggaaatttccattgatgctagttgaagcaaccatgaatcttgcaaaaccttggttctgttatacca |
14944202 |
T |
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