View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1478_low_14 (Length: 257)
Name: NF1478_low_14
Description: NF1478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1478_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 15 - 249
Target Start/End: Complemental strand, 32361692 - 32361458
Alignment:
| Q |
15 |
aaatatctcatccactatagtgataggtgtcctattcctattctataaatcgaaaccaaactttccttagaagattaattcaactcaaaaggtcattaac |
114 |
Q |
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| T |
32361692 |
aaatatctcatccactatagtgataggtatcctattcctattctataaatcgaaaccaaactttccttagaagattaattcaactcaaaaggtcactaac |
32361593 |
T |
|
| Q |
115 |
aatacccttcaaaaatgcagacagctctaacctttgcaaccactacctttgtgcctttaacaacaccaaagagtgtctcacatcttgccactaatttgag |
214 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
32361592 |
aatacccttaaaaaatgcagacagctctaacctttgcaaccactacctttgtgcctttaacaacaccaaagagtatctcacatcttgccactaatttgag |
32361493 |
T |
|
| Q |
215 |
tttccctaccaaattgattacctcacgttcttctc |
249 |
Q |
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||||||||||||||||||| ||||||||||||||| |
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| T |
32361492 |
tttccctaccaaattgattgcctcacgttcttctc |
32361458 |
T |
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