View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1478_low_17 (Length: 227)
Name: NF1478_low_17
Description: NF1478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1478_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 211
Target Start/End: Original strand, 37118750 - 37118946
Alignment:
| Q |
15 |
tactatatctacatcttcctttcattattttttatctttaagtatccacttatgattttgtaaccaaataagtcatgctctttgataaactcaagagctt |
114 |
Q |
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| T |
37118750 |
tactatatctacatcttcctttcattattttttatctttaagtatccacttatgattttgtaaccaaataagtcatgctctttgataaactcaagagctt |
37118849 |
T |
|
| Q |
115 |
attgtcaatccagttggatctgaccaactgataagtcatgataagccatgctctgatagctgagcctgaaaagttccatcaatttagatcaaaacac |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37118850 |
attgtcaatccagttggatctgaccaactgataagtcatgataagccatgctctgatagctgagcctgaaaagttccatcaatttagatcaaaacac |
37118946 |
T |
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