View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1478_low_3 (Length: 551)
Name: NF1478_low_3
Description: NF1478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1478_low_3 |
 |  |
|
| [»] scaffold0572 (1 HSPs) |
 |  |  |
|
| [»] scaffold0127 (1 HSPs) |
 |  |  |
|
| [»] scaffold0620 (1 HSPs) |
 |  |  |
|
| [»] scaffold0157 (1 HSPs) |
 |  |  |
|
| [»] scaffold0036 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 391; Significance: 0; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 19 - 544
Target Start/End: Complemental strand, 19948073 - 19947563
Alignment:
| Q |
19 |
tatggtatcttctcgtgtgagatggaagttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggagtca |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| |
|
|
| T |
19948073 |
tatggtatcttctcgtgtgagatggaagttgaggggtgccttagtgatttgtttctggagtctgacagaccaatcgcttttgcttcgagattgagagtca |
19947974 |
T |
 |
| Q |
119 |
ctctataggctcaagtttagggcttgtttggcgtattctccgacaaactgagggtggattggtggtggaatccatatttagaataagcagttttcagttg |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
19947973 |
ctctataggctcaagtttagggcttgtttggcgtattctccgacaaactgagggtggattggtggtggaatccaaatttagaataagcagttttcagttg |
19947874 |
T |
 |
| Q |
219 |
tttatttgggctctactttgaaagagaacttaaggtgcttttataggcgttttgatcggtattttgattttttggaggggttttcttgcaagtagcggga |
318 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19947873 |
tttatttgggctctactttgaaagagaatttaaggtacttt-------gttt--------attttgattttttggaggggttttcttgcaagtagcggga |
19947789 |
T |
 |
| Q |
319 |
tttgaaactatcttttgtggttcttcgcattggagattgaggatttgggccaaatttggtttatgttggtatgtggaggtatgactttgattttggtgct |
418 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| |
|
|
| T |
19947788 |
tttgaaactatcttttgtggttcttcgcgttggagattgaggatttgggccaaatttggtttatattggtatgtggagctttgactttgattttggtgct |
19947689 |
T |
 |
| Q |
419 |
ggctttgattttgtattgatttttggtggtagccttgagtagggaagtgtctttgttggtgttttgatattcgaaatgtataagatttcttttgggtgtt |
518 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
19947688 |
ggctttgattttgtgttgatttttggtggtatccttgagtagggaagtgtctttgttgctgttttgatgttcgaggtgtataagatttcttttgggtgtt |
19947589 |
T |
 |
| Q |
519 |
ttgcccatatactacgtcctttgctt |
544 |
Q |
| |
|
|||| |||||| ||||||||||||| |
|
|
| T |
19947588 |
ctgcctatataccacgtcctttgctt |
19947563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 8520384 - 8520445
Alignment:
| Q |
48 |
tgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagat |
109 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
8520384 |
tgaggggtgccttagtgatttgtttctagagtctgatggaccaatcacttttgattcgagat |
8520445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 3985432 - 3985498
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattg |
111 |
Q |
| |
|
|||||||| |||||||||||||||| || |||||| |||||| | ||||||||||||| ||||||| |
|
|
| T |
3985432 |
agttgaggagtgccttagtgatttgcttatggagtttgatggggcgatcacttttgctttgagattg |
3985498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 4162121 - 4162052
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggag |
115 |
Q |
| |
|
||||||||||||||| |||||||||| | |||||||| ||| || |||||||||| |||||||| ||||| |
|
|
| T |
4162121 |
agttgaggggtgcct-agtgatttgtgttgggagtctggtgggccgatcacttttgattcgagatcgggag |
4162052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 34143156 - 34143082
Alignment:
| Q |
44 |
aagttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggagtca |
118 |
Q |
| |
|
||||||||||||| |||||||||| ||| ||||||||| || || |||||||||||||| |||| || ||||| |
|
|
| T |
34143156 |
aagttgaggggtgttttagtgatttttttttggagtctggtgagccgatcacttttgcttctagatcggaagtca |
34143082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 34105392 - 34105465
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggagtca |
118 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||| || ||| || |||||||||| |||||||| |||||||| |
|
|
| T |
34105392 |
agttgaagggtgccttagtgatttgtttctagagtttggtgggccgatcacttttgattcgagatcgggagtca |
34105465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 16438027 - 16437926
Alignment:
| Q |
19 |
tatggtatcttctcgtgtgagatggaagtt--gaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggagt |
116 |
Q |
| |
|
|||||| | ||||| ||||||||| ||||| ||||| |||||||||||||||||| | || |||| |||||| | || |||||||| ||||| || ||| |
|
|
| T |
16438027 |
tatggtgtattctcttgtgagatgaaagttttgagggatgccttagtgatttgtttatagattctggtggaccgaccatttttgctttgagatcggaagt |
16437928 |
T |
 |
| Q |
117 |
ca |
118 |
Q |
| |
|
|| |
|
|
| T |
16437927 |
ca |
16437926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 20970507 - 20970445
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgag |
107 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||| || || ||||| |||| |||||| |
|
|
| T |
20970507 |
agttgaggggtgacttagtgatttgtttctagagtctggtgagccgatcacatttgattcgag |
20970445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 3968652 - 3968588
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagat |
109 |
Q |
| |
|
|||||||||||||||| |||||||| || |||||||| |||||||||| ||||||||||||||| |
|
|
| T |
3968652 |
agttgaggggtgccttgatgatttgtgtcgggagtctggtggaccaatcgcttttgcttcgagat |
3968588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 4000153 - 4000217
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagat |
109 |
Q |
| |
|
|||||||||||||||| |||||||| || |||||||| |||||||||| ||||||||||||||| |
|
|
| T |
4000153 |
agttgaggggtgccttgatgatttgtgtcgggagtctggtggaccaatcgcttttgcttcgagat |
4000217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 7170931 - 7170889
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatgga |
87 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
7170931 |
agttgaggggtgccttagtgatttgtttttgaagtctaatgga |
7170889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 19206168 - 19206235
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattggg |
113 |
Q |
| |
|
||||||||||| ||||| |||| | || |||||| |||||||||||| ||||||| |||||||||||| |
|
|
| T |
19206168 |
agttgaggggtacctta-tgatatacttttggagtatgatggaccaataacttttgattcgagattggg |
19206235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 24099424 - 24099368
Alignment:
| Q |
50 |
aggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcga |
106 |
Q |
| |
|
|||||||||||| |||||||||| | ||||||| ||| || |||||||||| ||||| |
|
|
| T |
24099424 |
aggggtgccttaatgatttgtttatagagtctggtgggccgatcacttttgattcga |
24099368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 27993638 - 27993568
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggag |
115 |
Q |
| |
|
|||||||||||| ||| |||||||| || |||||||| |||||| |||||||||| |||||||| ||||| |
|
|
| T |
27993638 |
agttgaggggtgtctttatgatttgtgtcgggagtctggtggaccgatcacttttgattcgagatcgggag |
27993568 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 41089818 - 41089777
Alignment:
| Q |
77 |
agtctgatggaccaatcacttttgcttcgagattgggagtca |
118 |
Q |
| |
|
|||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
41089818 |
agtctggtggaccgatcacttttgattcgagattgggagtca |
41089777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 12470049 - 12470103
Alignment:
| Q |
64 |
gatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggagtca |
118 |
Q |
| |
|
||||||||| ||||||||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
12470049 |
gatttgtttatggagtctggtgtgccaatcaattttgcttcgagattgggagtca |
12470103 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 12470618 - 12470672
Alignment:
| Q |
64 |
gatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggagtca |
118 |
Q |
| |
|
||||||||| ||||||||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
12470618 |
gatttgtttatggagtctggtgtgccaatcaattttgcttcgagattgggagtca |
12470672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 53823491 - 53823450
Alignment:
| Q |
77 |
agtctgatggaccaatcacttttgcttcgagattgggagtca |
118 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||| |||||||| |
|
|
| T |
53823491 |
agtctggtggaccaatcacttttgattcgagatcgggagtca |
53823450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 12489818 - 12489870
Alignment:
| Q |
64 |
gatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggagt |
116 |
Q |
| |
|
||||||||| |||||||| || ||||||| ||||||||||||||||||||| |
|
|
| T |
12489818 |
gatttgtttatggagtctagtgtgccaatcaattttgcttcgagattgggagt |
12489870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 35; Significance: 0.0000000002; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 13987600 - 13987670
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggag |
115 |
Q |
| |
|
|||||||||||||||| |||||||| || ||| |||| ||| |||||| ||||||||||||||| ||||| |
|
|
| T |
13987600 |
agttgaggggtgccttgatgatttgtgtcgggaatctggtgggccaatcgcttttgcttcgagatcgggag |
13987670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 15841011 - 15840941
Alignment:
| Q |
48 |
tgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggagtca |
118 |
Q |
| |
|
|||||||| |||||| ||||||||||| ||||||| ||| | |||||||||| |||||||| |||||||| |
|
|
| T |
15841011 |
tgaggggttccttagggatttgtttctagagtctggtgggctgatcacttttgattcgagatcgggagtca |
15840941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 32876726 - 32876653
Alignment:
| Q |
47 |
ttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggagtcact |
120 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| || ||| | | ||||||| |||||||| |||||||||| |
|
|
| T |
32876726 |
ttgaggggtgccttagtgatttgtttatggagtatggtgggtcgacgacttttgattcgagatcgggagtcact |
32876653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 17891520 - 17891560
Alignment:
| Q |
75 |
ggagtctgatggaccaatcacttttgcttcgagattgggag |
115 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
17891520 |
ggagtctgatggaccgatcacttttgattcgagattgggag |
17891560 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 22199990 - 22200060
Alignment:
| Q |
48 |
tgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggagtca |
118 |
Q |
| |
|
|||||||| |||| ||||||| |||||||||||||||||| |||||||||| ||| |||| | |||||| |
|
|
| T |
22199990 |
tgaggggtatcttactgatttgactctggagtctgatggaccgatcacttttgattcaagatcgagagtca |
22200060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 41403100 - 41403038
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgag |
107 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||| || || ||||| |||| |||||| |
|
|
| T |
41403100 |
agttgaggggtgacttagtgatttgtttctagagtctggtgagccgatcacatttgattcgag |
41403038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 24658913 - 24658981
Alignment:
| Q |
50 |
aggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggagtca |
118 |
Q |
| |
|
||||||||| | ||||||| |||| |||||| ||| ||||||||||||| |||||||| |||||||| |
|
|
| T |
24658913 |
aggggtgccctgctgatttggttctaaagtctggtgggccaatcacttttgattcgagatcgggagtca |
24658981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0572 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0572
Description:
Target: scaffold0572; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 6357 - 6295
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgag |
107 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||| || || ||||| |||| |||||| |
|
|
| T |
6357 |
agttgaggggtgacttagtgatttgtttctagagtctggtgagccgatcacatttgattcgag |
6295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0127 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0127
Description:
Target: scaffold0127; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 31235 - 31297
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgag |
107 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||| || || ||||| |||| |||||| |
|
|
| T |
31235 |
agttgaggggtgacttagtgatttgtttctagagtctggtgagccgatcacatttgattcgag |
31297 |
T |
 |
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Target: scaffold0620 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0620
Description:
Target: scaffold0620; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 3817 - 3882
Alignment:
| Q |
53 |
ggtgccttagtgatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggagtca |
118 |
Q |
| |
|
||||||| |||||||||||| | ||||||| ||| || |||| ||||| |||||||| |||||||| |
|
|
| T |
3817 |
ggtgcctcagtgatttgtttttagagtctggtgggccgatcaattttgattcgagatcgggagtca |
3882 |
T |
 |
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Target: chr8 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 12883569 - 12883622
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatggaccaatcacttt |
98 |
Q |
| |
|
||||||||||||||||| | |||||||| ||||||||| |||||| ||| |||| |
|
|
| T |
12883569 |
agttgaggggtgccttaataatttgtttatggagtctggtggaccgatcgcttt |
12883622 |
T |
 |
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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0157
Description:
Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 30659 - 30607
Alignment:
| Q |
64 |
gatttgtttctggagtctgatggaccaatcacttttgcttcgagattgggagt |
116 |
Q |
| |
|
||||||||| |||||||| || ||||||| ||||||||||||||||||||| |
|
|
| T |
30659 |
gatttgtttatggagtctagtgtgccaatcaattttgcttcgagattgggagt |
30607 |
T |
 |
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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: scaffold0036
Description:
Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 64395 - 64356
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatg |
85 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
64395 |
agttgaagggtgcct-agtgatttgtttctggagtctgatg |
64356 |
T |
 |
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Target: scaffold0036; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 69536 - 69497
Alignment:
| Q |
45 |
agttgaggggtgccttagtgatttgtttctggagtctgatg |
85 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
69536 |
agttgaagggtgcct-agtgatttgtttctggagtctgatg |
69497 |
T |
 |
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