View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14791_low_17 (Length: 273)
Name: NF14791_low_17
Description: NF14791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14791_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 118 - 271
Target Start/End: Original strand, 14438559 - 14438713
Alignment:
| Q |
118 |
cattattaattttaccaaacacttatgtctattcctaccaccttcaatatatacagtaataataaa-ttttttgcaatttctcatttaaacctaacctaa |
216 |
Q |
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| T |
14438559 |
cattattaattttactaaacacttatgtctattcctaccaccttcaatctatacagtaataatacagttttttgcaattcatcatttaaacctaacctaa |
14438658 |
T |
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| Q |
217 |
aacaacgctgtttcgtctgatataaaatctcataccctaaaaattgtctgtgctc |
271 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
14438659 |
aacaacgctgcttcgtctgatataaaatctcataccctaaaaattgtgtgtgctc |
14438713 |
T |
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