View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14791_low_25 (Length: 221)
Name: NF14791_low_25
Description: NF14791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14791_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 35392504 - 35392628
Alignment:
| Q |
68 |
aactcatcagtaaaaccacgacgcttctttcataaacgacactgaaattctgaaacagagaaatacataattgcggtttaaccgagaagacgacgacgtt |
167 |
Q |
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| T |
35392504 |
aactcatcagtaaaacgacgacgcttctttcataaacgacactgaaattctgaaacagagaaatacataattgcggtttaaccgagaagacgacgacgtt |
35392603 |
T |
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| Q |
168 |
actatcacgaacaacctacaaaaag |
192 |
Q |
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| T |
35392604 |
actatcacgaacaacctacaaaaag |
35392628 |
T |
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Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35392440 - 35392485
Alignment:
| Q |
1 |
tccttagtaagaagtggcttcaatttcaaaacaacatccttcactg |
46 |
Q |
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| T |
35392440 |
tccttagtaagaagtggcttcaatttcaaaacaacatccttcactg |
35392485 |
T |
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