View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14792_low_4 (Length: 419)

Name: NF14792_low_4
Description: NF14792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14792_low_4
NF14792_low_4
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-394)||(85201-85590)
[»] chr7 (31 HSPs)
chr7 (1-394)||(40880693-40881082)
chr7 (45-139)||(4974680-4974774)
chr7 (45-145)||(15238402-15238502)
chr7 (45-135)||(37477025-37477115)
chr7 (45-139)||(45637738-45637832)
chr7 (21-139)||(48880848-48880966)
chr7 (45-137)||(30848597-30848689)
chr7 (23-135)||(35444588-35444700)
chr7 (47-139)||(42611837-42611929)
chr7 (21-139)||(3962005-3962123)
chr7 (45-139)||(34482861-34482955)
chr7 (45-139)||(36790411-36790505)
chr7 (45-139)||(15329299-15329393)
chr7 (45-135)||(18037008-18037098)
chr7 (16-133)||(25167766-25167883)
chr7 (45-133)||(29737171-29737259)
chr7 (45-139)||(15577795-15577889)
chr7 (45-139)||(20010043-20010136)
chr7 (45-122)||(42696126-42696203)
chr7 (45-139)||(24394998-24395092)
chr7 (88-139)||(42696277-42696328)
chr7 (86-139)||(20009919-20009972)
chr7 (88-133)||(25167682-25167727)
chr7 (88-140)||(15238578-15238630)
chr7 (88-140)||(18037171-18037223)
chr7 (88-140)||(37476899-37476951)
chr7 (88-126)||(4974568-4974606)
chr7 (99-133)||(30848774-30848808)
chr7 (99-133)||(48880753-48880787)
chr7 (88-133)||(34483032-34483077)
chr7 (88-133)||(45637905-45637950)
[»] chr8 (55 HSPs)
chr8 (24-139)||(34665408-34665523)
chr8 (45-135)||(31347727-31347817)
chr8 (45-139)||(20091746-20091840)
chr8 (42-139)||(27782059-27782156)
chr8 (45-133)||(7017810-7017898)
chr8 (23-139)||(42754965-42755081)
chr8 (21-135)||(17841771-17841885)
chr8 (21-135)||(40780050-40780164)
chr8 (45-137)||(3890562-3890653)
chr8 (21-139)||(1645886-1646004)
chr8 (45-135)||(7022008-7022098)
chr8 (21-139)||(41819699-41819817)
chr8 (45-130)||(30834992-30835077)
chr8 (21-133)||(6108154-6108266)
chr8 (23-139)||(32064771-32064887)
chr8 (21-139)||(32393884-32394002)
chr8 (45-139)||(14128890-14128984)
chr8 (45-139)||(15187586-15187680)
chr8 (21-139)||(24211474-24211592)
chr8 (45-139)||(24844804-24844897)
chr8 (45-139)||(37986000-37986094)
chr8 (45-139)||(39772746-39772840)
chr8 (45-138)||(27835398-27835491)
chr8 (45-137)||(3596986-3597078)
chr8 (45-137)||(15972822-15972914)
chr8 (45-133)||(25581184-25581272)
chr8 (45-139)||(26042058-26042155)
chr8 (45-135)||(35353071-35353161)
chr8 (45-135)||(8453864-8453954)
chr8 (45-118)||(10044390-10044463)
chr8 (93-139)||(37132651-37132697)
chr8 (85-137)||(3817915-3817967)
chr8 (89-139)||(38016997-38017047)
chr8 (86-139)||(3890435-3890488)
chr8 (88-140)||(31347595-31347647)
chr8 (88-133)||(1503669-1503714)
chr8 (88-133)||(17841676-17841721)
chr8 (88-133)||(20091627-20091672)
chr8 (88-133)||(26041939-26041984)
chr8 (88-133)||(34665575-34665620)
chr8 (88-133)||(40779955-40780000)
chr8 (88-137)||(41819590-41819639)
chr8 (86-133)||(30055708-30055755)
chr8 (88-139)||(30834876-30834927)
chr8 (86-133)||(35353233-35353280)
chr8 (88-139)||(37132501-37132552)
chr8 (102-139)||(1886621-1886658)
chr8 (88-133)||(6108059-6108104)
chr8 (88-133)||(8454027-8454072)
chr8 (88-133)||(10044542-10044587)
chr8 (88-133)||(14129053-14129098)
chr8 (86-139)||(24844681-24844734)
chr8 (88-133)||(37985882-37985927)
chr8 (88-140)||(7017677-7017729)
chr8 (88-140)||(7022173-7022225)
[»] chr6 (24 HSPs)
chr6 (16-144)||(9752161-9752289)
chr6 (21-139)||(33695248-33695366)
chr6 (21-139)||(33696722-33696840)
chr6 (45-145)||(11548533-11548633)
chr6 (45-139)||(17705410-17705504)
chr6 (21-139)||(28675174-28675292)
chr6 (21-122)||(2309344-2309445)
chr6 (16-139)||(23291000-23291123)
chr6 (21-139)||(17175942-17176060)
chr6 (45-139)||(18365518-18365612)
chr6 (45-139)||(18370782-18370876)
chr6 (21-139)||(8515647-8515764)
chr6 (47-139)||(6127301-6127394)
chr6 (45-139)||(25986956-25987050)
chr6 (45-131)||(32702239-32702325)
chr6 (21-136)||(6031662-6031777)
chr6 (86-140)||(18889683-18889737)
chr6 (88-140)||(11548408-11548460)
chr6 (88-139)||(29693639-29693690)
chr6 (88-133)||(2309249-2309294)
chr6 (266-337)||(2961726-2961797)
chr6 (99-137)||(29693478-29693516)
chr6 (88-137)||(18889466-18889515)
chr6 (88-133)||(28675342-28675387)
[»] chr4 (51 HSPs)
chr4 (21-139)||(10442710-10442828)
chr4 (45-139)||(21802267-21802361)
chr4 (16-139)||(31078735-31078858)
chr4 (21-139)||(7745033-7745151)
chr4 (21-135)||(24128269-24128383)
chr4 (21-137)||(9088898-9089014)
chr4 (23-133)||(17655462-17655572)
chr4 (21-135)||(47290096-47290210)
chr4 (45-139)||(49387833-49387927)
chr4 (47-139)||(33530635-33530727)
chr4 (23-135)||(44893456-44893568)
chr4 (23-130)||(44893136-44893243)
chr4 (21-139)||(4751472-4751590)
chr4 (45-139)||(22199287-22199381)
chr4 (45-135)||(24392697-24392787)
chr4 (45-139)||(36072973-36073067)
chr4 (45-139)||(42671695-42671789)
chr4 (45-133)||(53123063-53123151)
chr4 (45-133)||(46441876-46441964)
chr4 (45-139)||(23964410-23964504)
chr4 (21-135)||(50156499-50156613)
chr4 (21-137)||(30563237-30563353)
chr4 (45-139)||(2624863-2624957)
chr4 (45-135)||(36073380-36073470)
chr4 (21-139)||(36073664-36073782)
chr4 (45-139)||(37934886-37934980)
chr4 (50-121)||(11314184-11314255)
chr4 (45-133)||(37219657-37219745)
chr4 (47-139)||(44744461-44744553)
chr4 (88-139)||(37219825-37219876)
chr4 (88-133)||(9089064-9089109)
chr4 (88-133)||(53123225-53123270)
chr4 (88-140)||(24392868-24392920)
chr4 (88-139)||(42671862-42671913)
chr4 (268-318)||(4634981-4635031)
chr4 (88-130)||(31078648-31078690)
chr4 (88-133)||(36073543-36073588)
chr4 (88-133)||(46442038-46442083)
chr4 (88-133)||(49387713-49387758)
chr4 (99-139)||(25063395-25063435)
chr4 (89-139)||(11314072-11314122)
chr4 (88-133)||(10442613-10442658)
chr4 (88-133)||(21802146-21802191)
chr4 (88-133)||(23964290-23964335)
chr4 (88-137)||(30563403-30563452)
chr4 (88-133)||(36073145-36073190)
chr4 (88-133)||(44893039-44893084)
chr4 (88-133)||(44893620-44893665)
chr4 (88-133)||(47290260-47290305)
chr4 (88-133)||(50156405-50156449)
chr4 (266-318)||(4635248-4635300)
[»] chr2 (32 HSPs)
chr2 (21-139)||(9293497-9293615)
chr2 (49-139)||(14941315-14941405)
chr2 (45-139)||(31174779-31174873)
chr2 (21-139)||(35160783-35160901)
chr2 (47-135)||(43330942-43331030)
chr2 (21-139)||(21936107-21936226)
chr2 (45-139)||(10661913-10662007)
chr2 (45-135)||(23268007-23268097)
chr2 (45-137)||(3989104-3989196)
chr2 (45-145)||(21393633-21393733)
chr2 (21-135)||(7475429-7475543)
chr2 (45-139)||(13354872-13354966)
chr2 (45-139)||(22591508-22591602)
chr2 (21-135)||(33380237-33380351)
chr2 (45-139)||(27847658-27847752)
chr2 (45-139)||(9723431-9723525)
chr2 (49-133)||(37335745-37335829)
chr2 (45-108)||(16767417-16767480)
chr2 (87-139)||(22592905-22592957)
chr2 (45-93)||(40262681-40262729)
chr2 (88-133)||(33380401-33380446)
chr2 (88-133)||(35160953-35160998)
chr2 (88-140)||(43331106-43331158)
chr2 (88-133)||(9293401-9293446)
chr2 (88-133)||(10662082-10662127)
chr2 (266-315)||(13837195-13837244)
chr2 (88-133)||(23267888-23267933)
chr2 (88-125)||(34320991-34321028)
chr2 (88-136)||(9723600-9723648)
chr2 (88-124)||(14941199-14941235)
chr2 (88-136)||(16767285-16767333)
chr2 (88-140)||(21393505-21393556)
[»] scaffold0471 (1 HSPs)
scaffold0471 (21-135)||(12872-12986)
[»] scaffold0085 (2 HSPs)
scaffold0085 (21-139)||(47876-47994)
scaffold0085 (88-133)||(48043-48088)
[»] chr5 (35 HSPs)
chr5 (21-139)||(11361052-11361170)
chr5 (45-135)||(22912999-22913089)
chr5 (23-139)||(8145401-8145517)
chr5 (45-145)||(17545630-17545730)
chr5 (21-137)||(31640861-31640977)
chr5 (45-139)||(12614678-12614772)
chr5 (21-139)||(14138694-14138812)
chr5 (21-135)||(4892232-4892346)
chr5 (21-135)||(25398268-25398382)
chr5 (21-139)||(38899647-38899765)
chr5 (21-139)||(2477662-2477780)
chr5 (45-139)||(3362804-3362898)
chr5 (21-135)||(3521927-3522041)
chr5 (21-139)||(6043432-6043550)
chr5 (21-139)||(12850827-12850945)
chr5 (21-135)||(33584250-33584364)
chr5 (45-139)||(37321738-37321832)
chr5 (45-133)||(4433952-4434040)
chr5 (47-139)||(27481852-27481940)
chr5 (88-140)||(22912876-22912928)
chr5 (99-145)||(10458417-10458463)
chr5 (265-318)||(11890244-11890297)
chr5 (88-133)||(4892396-4892441)
chr5 (88-133)||(11360957-11361002)
chr5 (100-137)||(31640763-31640800)
chr5 (88-133)||(33584155-33584200)
chr5 (88-140)||(17545501-17545553)
chr5 (88-133)||(3521833-3521878)
chr5 (88-133)||(6043338-6043383)
chr5 (88-133)||(8145567-8145612)
chr5 (88-133)||(12850996-12851041)
chr5 (88-133)||(14138861-14138906)
chr5 (88-133)||(25398432-25398477)
chr5 (47-76)||(36880270-36880299)
chr5 (87-139)||(27482016-27482068)
[»] chr3 (46 HSPs)
chr3 (45-135)||(8361990-8362080)
chr3 (45-139)||(6041910-6042004)
chr3 (45-137)||(41883168-41883260)
chr3 (16-135)||(3137330-3137449)
chr3 (21-139)||(3574447-3574566)
chr3 (45-135)||(9796974-9797064)
chr3 (21-139)||(30385037-30385155)
chr3 (45-122)||(33145755-33145832)
chr3 (47-139)||(33113819-33113911)
chr3 (45-139)||(2754743-2754837)
chr3 (45-139)||(11347294-11347388)
chr3 (21-135)||(34482831-34482945)
chr3 (45-139)||(47738131-47738225)
chr3 (21-122)||(3089460-3089561)
chr3 (47-139)||(22426291-22426383)
chr3 (45-139)||(3456090-3456184)
chr3 (45-139)||(37216998-37217092)
chr3 (45-139)||(48160931-48161025)
chr3 (21-139)||(19650820-19650939)
chr3 (45-139)||(42297379-42297474)
chr3 (45-139)||(8320529-8320623)
chr3 (45-139)||(24343573-24343667)
chr3 (45-139)||(33839557-33839651)
chr3 (21-135)||(41224263-41224377)
chr3 (45-139)||(36864972-36865066)
chr3 (45-135)||(37522083-37522173)
chr3 (45-109)||(42297920-42297984)
chr3 (45-139)||(42921169-42921263)
chr3 (45-93)||(40327897-40327945)
chr3 (60-139)||(26612811-26612890)
chr3 (88-139)||(47738305-47738356)
chr3 (88-140)||(8361858-8361910)
chr3 (88-140)||(41224428-41224480)
chr3 (88-139)||(40328025-40328076)
chr3 (47-133)||(46918934-46919020)
chr3 (88-133)||(3137240-3137285)
chr3 (88-133)||(34482714-34482759)
chr3 (88-140)||(9796848-9796900)
chr3 (88-139)||(33839729-33839780)
chr3 (88-139)||(36864853-36864904)
chr3 (88-133)||(8320408-8320453)
chr3 (88-133)||(30385594-30385639)
chr3 (88-133)||(33113988-33114033)
chr3 (88-133)||(33145906-33145951)
chr3 (88-133)||(37522247-37522292)
chr3 (99-139)||(46919099-46919139)
[»] chr1 (39 HSPs)
chr1 (21-139)||(40215014-40215132)
chr1 (21-135)||(37821755-37821869)
chr1 (45-139)||(44094724-44094818)
chr1 (21-133)||(6883519-6883631)
chr1 (16-139)||(27523171-27523294)
chr1 (45-140)||(33786580-33786675)
chr1 (45-135)||(9910238-9910328)
chr1 (21-139)||(18404468-18404586)
chr1 (21-135)||(19015434-19015548)
chr1 (21-139)||(25463702-25463820)
chr1 (45-135)||(32000212-32000302)
chr1 (45-135)||(40273732-40273822)
chr1 (48-139)||(16045746-16045837)
chr1 (21-139)||(3559643-3559761)
chr1 (45-135)||(36966653-36966743)
chr1 (21-135)||(41876363-41876477)
chr1 (45-139)||(25973440-25973533)
chr1 (21-135)||(51737535-51737649)
chr1 (47-137)||(10167428-10167518)
chr1 (49-139)||(34519784-34519874)
chr1 (45-139)||(44690974-44691068)
chr1 (23-92)||(20305054-20305123)
chr1 (89-139)||(44690842-44690892)
chr1 (88-140)||(32000085-32000137)
chr1 (88-140)||(33786450-33786502)
chr1 (88-140)||(40273902-40273954)
chr1 (88-133)||(9910117-9910162)
chr1 (88-133)||(19015598-19015643)
chr1 (88-133)||(51737699-51737744)
chr1 (45-93)||(51621002-51621050)
chr1 (92-139)||(52064398-52064445)
chr1 (88-126)||(52329469-52329507)
chr1 (88-133)||(6883681-6883726)
chr1 (88-133)||(20304956-20305001)
chr1 (88-133)||(36966534-36966579)
chr1 (88-133)||(37821660-37821705)
chr1 (88-133)||(40215182-40215227)
chr1 (88-133)||(41876268-41876313)
chr1 (98-126)||(51622025-51622053)
[»] scaffold0204 (1 HSPs)
scaffold0204 (21-135)||(4426-4540)
[»] scaffold0178 (2 HSPs)
scaffold0178 (21-139)||(11647-11765)
scaffold0178 (88-133)||(11815-11860)
[»] scaffold0096 (1 HSPs)
scaffold0096 (21-139)||(41037-41155)
[»] scaffold0228 (5 HSPs)
scaffold0228 (45-139)||(8428-8522)
scaffold0228 (45-139)||(16010-16104)
scaffold0228 (45-139)||(25962-26056)
scaffold0228 (88-133)||(16178-16223)
scaffold0228 (88-133)||(26130-26175)
[»] scaffold0665 (1 HSPs)
scaffold0665 (45-139)||(3094-3188)


Alignment Details
Target: scaffold0041 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 394
Target Start/End: Complemental strand, 85590 - 85201
Alignment:
Q  1 ggcacaataatcactccatgaccccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatg 100  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  85590 ggcacaataatcactccatgaccccatgattttcgaccaggctaagattttattggctaacattaatttcaggataatttcttcataaaatttaaggatg 85491  T
Q  101 attattctgccatgtcattcttgaatttttcttgataaattttttggcattgctctaattaattttgatgggtctcgttgacaaaacaaatgatttagat 200  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  85490 attattctgccatgtcattcttgagtttttcttgataaattttttagcattgctctaattaattttgatgggtctcgttgacaaaacaaatgatttagat 85391  T
Q  201 ctgtgcaaaattttacatatggttgatctatacgaaataaatttaatatctaagagtaaaatttgaaaatatgtatcgagtaaaatgatatcaaagggtg 300  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  85390 ctgtgcaaaattttacatatggttgatctatatgaaataaatttaacatctaagtgtaaaatttgaaaatatgtatcgagtaaaatgatatgaaagggtg 85291  T
Q  301 taacattgttgtaacattcaattagtataatttgatctattttaannnnnnncattggatacttaactattgaaattcattccacttaattaat 394  Q
    |||||||||||||||||||||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||    
T  85290 taacattgttgtaacattcaatcagtataatttgatctatttt----cttttcattggatacttaactattgaaattcattccacttaattaat 85201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 394
Target Start/End: Original strand, 40880693 - 40881082
Alignment:
Q  1 ggcacaataatcactccatgaccccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatg 100  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  40880693 ggcacaataatcactccatgaccccatgattttcgaccaggctaagattttattggctaacattaatttcaggataatttcttcataaaatttaaggatg 40880792  T
Q  101 attattctgccatgtcattcttgaatttttcttgataaattttttggcattgctctaattaattttgatgggtctcgttgacaaaacaaatgatttagat 200  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40880793 attattctgccatgtcattcttgagtttttcttgataaattttttagcattgctctaattaattttgatgggtctcgttgacaaaacaaatgatttagat 40880892  T
Q  201 ctgtgcaaaattttacatatggttgatctatacgaaataaatttaatatctaagagtaaaatttgaaaatatgtatcgagtaaaatgatatcaaagggtg 300  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  40880893 ctgtgcaaaattttacatatggttgatctatatgaaataaatttaacatctaagtgtaaaatttgaaaatatgtatcgagtaaaatgatatgaaagggtg 40880992  T
Q  301 taacattgttgtaacattcaattagtataatttgatctattttaannnnnnncattggatacttaactattgaaattcattccacttaattaat 394  Q
    |||||||||||||||||||||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||    
T  40880993 taacattgttgtaacattcaatcagtataatttgatctatttt----cttttcattggatacttaactattgaaattcattccacttaattaat 40881082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 4974680 - 4974774
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  4974680 agattttattggctaacattaatttcaggataatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 4974774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 15238502 - 15238402
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaattttt 144  Q
    ||||||||||| |||||||||||||||| |||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  15238502 agattttattgactaacattaatttcagtacaatttcttgataaaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttt 15238403  T
Q  145 t 145  Q
    |    
T  15238402 t 15238402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 37477025 - 37477115
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  37477025 agattttattggctaacattaatttcagtacaatttcttgataaaatttaaggatgattattctgccatgtcattcttaaatttttcttga 37477115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 45637832 - 45637738
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  45637832 agattttattggctagcattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 45637738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 48880848 - 48880966
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||    
T  48880848 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgtcatgtcattc 48880947  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||||||||||||    
T  48880948 ttgaaattttcttgataaa 48880966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 45 - 137
Target Start/End: Complemental strand, 30848689 - 30848597
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgata 137  Q
    |||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  30848689 agattttattggttaacattaatttcaggactatttcttgataaaatctaaggatgattattctgccatgtcattcttaaaattttcttgata 30848597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 35444700 - 35444588
Alignment:
Q  23 cccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattctt 122  Q
    ||||||||||||| ||  ||| |||||||||||| ||||||||||||||| || ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  35444700 cccatgattttcggccaggctgagattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattctgccatgtcattctt 35444601  T
Q  123 gaatttttcttga 135  Q
    ||| |||||||||    
T  35444600 gaaattttcttga 35444588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 42611929 - 42611837
Alignment:
Q  47 attttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  42611929 attttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 42611837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 3962123 - 3962005
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || || |||| ||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||| ||||||||||| ||||||||||    
T  3962123 accccatgatttccggccaagctgagattttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattattctgtcatgtcattc 3962024  T
Q  121 ttgaatttttcttgataaa 139  Q
    || || |||||||||||||    
T  3962023 ttaaaattttcttgataaa 3962005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 34482955 - 34482861
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||| |||||    
T  34482955 agattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaa 34482861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 36790411 - 36790505
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||||| | |||||||||||||||||||||| ||||||||||||||||    
T  36790411 agattttattggctaacattaatttcagaacaatttcttgataaaatttaagggtaattattctgccatgtcattcttaaatttttcttgataaa 36790505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 15329393 - 15329299
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||| ||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  15329393 agattttattgactaacattaatttcaagactatttcttgataaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaa 15329299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 18037098 - 18037008
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  18037098 agattttattggctaacattaatttcagtacaattttttgataaaatttaagggtgattattctgccatgtcattcttaaatttttcttga 18037008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 25167766 - 25167883
Alignment:
Q  16 ccatgaccccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgt 115  Q
    |||| |||||||||||| || ||   || |||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||    
T  25167766 ccatcaccccatgatttccggccagactgagattttattggttaacattaatttcagaactatttcttgataaaatctaaggatgattattctgccatgt 25167865  T
Q  116 cattcttgaatttttctt 133  Q
    ||||||| || |||||||    
T  25167866 cattcttaaaattttctt 25167883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 29737259 - 29737171
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||| ||||||||||||| || |||||||    
T  29737259 agattttattggctaacattaatttcgggacaatttcttaataaaatctaagggtgattattctaccatgtcattcttaaaattttctt 29737171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 15577795 - 15577889
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||| ||||||||||||||||||||| |||  |||||| ||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  15577795 agattatattggctaacattaatttcaagactttttcttgataaagtctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 15577889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 20010043 - 20010136
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||  |||||||||||||| |||| ||||||||    
T  20010043 agattttattggctaacattaatttcaggacaattttttgataaaatctaagggtgattattctg-tatgtcattcttgaaatttttttgataaa 20010136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 42696203 - 42696126
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattctt 122  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| |||||||||||    
T  42696203 agattttattgactaacattaatttcaggacaatttcttgataaaatataagggtgattattctgctatgtcattctt 42696126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 24395092 - 24394998
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||||||| || |||| || ||||||||||| | |  ||||||||||||||||||||| || |||||||||||||    
T  24395092 agattttattggctaacattaatttcagaactattttttgataaaatctaaaggttgttattctgccatgtcattcttaaaattttcttgataaa 24394998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 42696277 - 42696328
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||| |||||||| | ||||||||||||||||||||| ||||||||    
T  42696277 aaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaa 42696328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 20009972 - 20009919
Alignment:
Q  86 taaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||| ||||||||| || |||||||||||||||| ||| ||||||||    
T  20009972 taaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaa 20009919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 25167727 - 25167682
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  25167727 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 25167682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 15238578 - 15238630
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    ||||||||||||||||||| || |||||||||||| ||| ||| |||||||||    
T  15238578 aaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaat 15238630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 18037171 - 18037223
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||||||||| |||||||| | ||||||||||||| ||| |||||||||||||    
T  18037171 aaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaat 18037223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 37476951 - 37476899
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||||||||| |||||||| |||||||||||| || ||| |||||||||||||    
T  37476951 aaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaat 37476899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 126
Target Start/End: Complemental strand, 4974606 - 4974568
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaat 126  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  4974606 aaatctaagggtgattattgtgccatgtcattcttgaat 4974568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 133
Target Start/End: Original strand, 30848774 - 30848808
Alignment:
Q  99 tgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| ||||||||||||||||||||||||||    
T  30848774 tgattattgtgccatgtcattcttgaatttttctt 30848808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 133
Target Start/End: Complemental strand, 48880787 - 48880753
Alignment:
Q  99 tgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| ||||||||||||||||||||||||||    
T  48880787 tgattattgtgccatgtcattcttgaatttttctt 48880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 34483032 - 34483077
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||    
T  34483032 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 34483077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 45637905 - 45637950
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||    
T  45637905 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 45637950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 34665523 - 34665408
Alignment:
Q  24 ccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttg 123  Q
    |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  34665523 ccatgattttcggccaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttg 34665424  T
Q  124 aatttttcttgataaa 139  Q
    || |||||||||||||    
T  34665423 aaattttcttgataaa 34665408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 31347727 - 31347817
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31347727 agattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatttttcttga 31347817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 20091746 - 20091840
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  20091746 agattttattggctaacattaatttcaggacgatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 20091840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 27782059 - 27782156
Alignment:
Q  42 ctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  27782059 ctaagattttattggctaacattaatttcaagacaatttcttgataaaatctaagggtgattattctgccatgtcattattgaatctttcttgataaa 27782156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 7017810 - 7017898
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    ||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7017810 agattttattggctaacattaattttagtacaatttcttgataaaatctaaggatgattattctgccatgtcattcttgaatttttctt 7017898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 42754965 - 42755081
Alignment:
Q  23 cccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattctt 122  Q
    ||||||||||||| ||  ||| |||||||||||| |||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  42754965 cccatgattttcggccaggctgagattttattggttaacattaatttcatgactatttcttgataaaatctaagggtgattattctgccatgtcattctt 42755064  T
Q  123 gaatttttcttgataaa 139  Q
    ||| |||||||||||||    
T  42755065 gaaattttcttgataaa 42755081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 17841771 - 17841885
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  17841771 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 17841870  T
Q  121 ttgaatttttcttga 135  Q
    ||||| |||||||||    
T  17841871 ttgaaattttcttga 17841885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 40780050 - 40780164
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  40780050 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 40780149  T
Q  121 ttgaatttttcttga 135  Q
    ||||| |||||||||    
T  40780150 ttgaaattttcttga 40780164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 3890562 - 3890653
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgata 137  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3890562 agattttattggctaacattaatttcgagacaatttcttgataaaatctaagg-tgattattctgccatgtcattcttgaatttttcttgata 3890653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 1645886 - 1646004
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| |||||  ||| |||||||||| |||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||| |||    
T  1645886 accccatgatttccgaccaggctgagattttattagctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtctttc 1645985  T
Q  121 ttgaatttttcttgataaa 139  Q
    || || |||||||||||||    
T  1645986 ttaaaattttcttgataaa 1646004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 7022098 - 7022008
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  7022098 agattttattggctaacattaatttcggtacaatttcttgataaaatctaagggtgattattctgccatatcattcttgaatttttcttga 7022008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 41819699 - 41819817
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  41819699 accccatgatttccggccgggctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatatcattc 41819798  T
Q  121 ttgaatttttcttgataaa 139  Q
    || ||   |||||||||||    
T  41819799 ttaaaacattcttgataaa 41819817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 30834992 - 30835077
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaattttt 130  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  30834992 agattttattgactaacattaatttcaggacaatttcttgataaaatcaaagggtgattattctgccatgtcattcttgaattttt 30835077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 6108154 - 6108266
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  6108154 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 6108253  T
Q  121 ttgaatttttctt 133  Q
    || || |||||||    
T  6108254 ttaaaattttctt 6108266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 32064887 - 32064771
Alignment:
Q  23 cccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattctt 122  Q
    |||||||||| || ||  ||| |||||||||||| ||||||||||||||| |  ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  32064887 cccatgatttccggccaggctgagattttattggttaacattaatttcagaattatttcttgataaaatctaagggtgattattctgccatgtcattctt 32064788  T
Q  123 gaatttttcttgataaa 139  Q
    ||| |||||||||||||    
T  32064787 gaaattttcttgataaa 32064771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 32394002 - 32393884
Alignment:
Q  21 accccatgattttcgacctag-ctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcatt 119  Q
    ||||||||||||||| | ||| || ||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||| |||||||||||||||||||||    
T  32394002 accccatgattttcggc-tagactgagattttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattattctgccatgtcatt 32393904  T
Q  120 cttgaatttttcttgataaa 139  Q
    ||| || |||||||||||||    
T  32393903 cttaaaattttcttgataaa 32393884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 14128984 - 14128890
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||| || |||| ||||||||    
T  14128984 agattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttattgataaa 14128890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 15187680 - 15187586
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| | ||||||||||||| ||||||||||| |||||||||||||    
T  15187680 agattttattggctaacattaatttcaagactatttcttgataaaatctaagggtaattattctgccatatcattcttgaaattttcttgataaa 15187586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 24211474 - 24211592
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||| ||| ||||||| ||||||| ||||| |||||||||||||||| |||||    
T  24211474 accccatgatttccggccaggctgagattttattggttaacattaatttcaagactatttcttgataaaatttaagggtgattattctgccatgccattc 24211573  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||||||||||||    
T  24211574 ttgaaattttcttgataaa 24211592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 24844804 - 24844897
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| || ||||||||||||||||||||||| |||||    
T  24844804 agattttattggctaacattaatttcgggacaatttcttgataaaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaa 24844897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 37986000 - 37986094
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||| || |||| ||||||||    
T  37986000 agattttattggctagcattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaa 37986094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 39772746 - 39772840
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||| ||| |||| || ||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  39772746 agattttattggctaacattaatttcaagactattttttgataaaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaa 39772840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 45 - 138
Target Start/End: Original strand, 27835398 - 27835491
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataa 138  Q
    ||||||||||||||||||||||||| | |||||||| || |||||||||||||||||||||| | |||||||||||||||||||||||| ||||    
T  27835398 agattttattggctaacattaatttgaagacaattttttaataaaatctaaggatgattattttaccatgtcattcttgaatttttcttaataa 27835491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 3596986 - 3597078
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgata 137  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| | |||||||||||||||||||||||||  ||||||||||    
T  3596986 agattttattggttaacattaatttcaggactatttcttgataaaatctaagggtaattattctgccatgtcattcttgaaactttcttgata 3597078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 15972822 - 15972914
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgata 137  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||||||||| ||||||||||| |||||||||||| ||| ||||||||||    
T  15972822 agattttattggctaacattaaattcagaacaatttcttgataaaatctaagggtgattattctgtcatgtcattcttcaatctttcttgata 15972914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 25581184 - 25581272
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||| | |||||||| |||||||||||||||||| |||||||    
T  25581184 agattttattggttaacattaatttcaggactatttcttgataaaatctaaaggtgattattttgccatgtcattcttgaaattttctt 25581272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 26042058 - 26042155
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaa---tctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||   ||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  26042058 agattttattggttaacattaatttcaggactatttcttgataaaaaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaa 26042155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 35353161 - 35353071
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||| |||||||||||||| ||  ||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||    
T  35353161 agattttattggttaacattaatttcatgattatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttga 35353071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 8453954 - 8453864
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||  | |||||||||||||||| ||||||| ||||||||||||| |||||||| || ||||||||||||||| |||||||||    
T  8453954 agattttattgtgttacattaatttcaggactatttcttgataaaatctaagggtgattattttgtcatgtcattcttgaaattttcttga 8453864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 10044463 - 10044390
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcat 118  Q
    |||||||||||||||||||||||| ||  || ||||||| ||||||| ||||||||||||||||| ||||||||    
T  10044463 agattttattggctaacattaattccaaaactatttcttgataaaatttaaggatgattattctgtcatgtcat 10044390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 37132651 - 37132697
Alignment:
Q  93 taaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  37132651 taaggatgattattctgccatgtcattcttaaatttttcttgataaa 37132697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 3817915 - 3817967
Alignment:
Q  85 ataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgata 137  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  3817915 ataaaatctaagggtgattattctgtcatgtaattcttgaatttttcttgata 3817967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 38017047 - 38016997
Alignment:
Q  89 aatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||    
T  38017047 aatccaagggtgattattctgccatgtcattcttgaaattttcttgataaa 38016997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 3890488 - 3890435
Alignment:
Q  86 taaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||| | ||||||||||||||| |||||||||||| ||||||||||||    
T  3890488 taaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaa 3890435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 31347647 - 31347595
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||||||| | |||||||| ||||||||||||||||||| |||||||||||||    
T  31347647 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaat 31347595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 1503714 - 1503669
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  1503714 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 1503669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 17841721 - 17841676
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  17841721 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 17841676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 20091672 - 20091627
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||||    
T  20091672 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 20091627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 26041984 - 26041939
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  26041984 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 26041939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 34665575 - 34665620
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||||    
T  34665575 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 34665620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 40780000 - 40779955
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  40780000 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 40779955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 41819639 - 41819590
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgata 137  Q
    |||||||||| |||||||| || |||||||||||||||| ||||||||||    
T  41819639 aaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgata 41819590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 30055708 - 30055755
Alignment:
Q  86 taaaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||||| |||||||| || |||||||||||||||| ||||||    
T  30055708 taaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 30055755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 30834927 - 30834876
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||| || |||||||| |||||||||||| ||| ||||||||||||    
T  30834927 aaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaa 30834876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 35353233 - 35353280
Alignment:
Q  86 taaaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||| ||| | |||||||| ||||||||||||||||||||||||||    
T  35353233 taaaatttaaaggtgattattgtgccatgtcattcttgaatttttctt 35353280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 37132552 - 37132501
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||| |||||||| || |||||||||| ||||| ||||||||||||    
T  37132552 aaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaa 37132501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 1886621 - 1886658
Alignment:
Q  102 ttattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaa 1886658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 6108104 - 6108059
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| || |||||||||||||||||||||||    
T  6108104 aaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt 6108059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 8454027 - 8454072
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| |||||||||||||||||||| |||||    
T  8454027 aaatctaaaggtgattattgtgccatgtcattcttgaattcttctt 8454072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 10044542 - 10044587
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||    
T  10044542 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 10044587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 14129053 - 14129098
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||    
T  14129053 aaatctaaaggtgattattgtgccatgtcattcttgaatatttctt 14129098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 24844734 - 24844681
Alignment:
Q  86 taaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||  |||||||| ||||||| ||||||| ||| ||||||||||||    
T  24844734 taaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaa 24844681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 37985927 - 37985882
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||    
T  37985927 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 37985882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 7017729 - 7017677
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    ||||||||||||||||||| |   ||||||||||| ||| |||||||||||||    
T  7017729 aaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaat 7017677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 7022173 - 7022225
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    ||||||||||  ||||||| || | |||||||||||||| |||||||||||||    
T  7022173 aaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaat 7022225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 9e-43; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 9752161 - 9752289
Alignment:
Q  16 ccatgaccccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgt 115  Q
    |||| |||||||||||| || ||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |    
T  9752161 ccatcaccccatgatttccggccaggctgagattttattggctaacattaatttcaggacaatttcttaataaaatctaagggtgattattctgccatat 9752260  T
Q  116 cattcttgaatttttcttgataaattttt 144  Q
    ||||||||||||||||||||||| |||||    
T  9752261 cattcttgaatttttcttgataatttttt 9752289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 33695248 - 33695366
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  33695248 accccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 33695347  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||||||||||||    
T  33695348 ttgaaattttcttgataaa 33695366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 33696840 - 33696722
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  33696840 accccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 33696741  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||||||||||||    
T  33696740 ttgaaattttcttgataaa 33696722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 11548533 - 11548633
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaattttt 144  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  11548533 agattttattggctaacattaatatcagtacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttt 11548632  T
Q  145 t 145  Q
    |    
T  11548633 t 11548633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 17705410 - 17705504
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| || |||||||||||||    
T  17705410 agattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaa 17705504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 28675292 - 28675174
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||| | ||||||||||    
T  28675292 accccatgatttccggccaggctgagattttattagctaacattaatttcaggacaatttcttgataaaatctaagggtgattattccgacatgtcattc 28675193  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||||||||||||    
T  28675192 ttgaaattttcttgataaa 28675174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 2309344 - 2309445
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || || |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  2309344 accccatgatttccggccaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgccattc 2309443  T
Q  121 tt 122  Q
    ||    
T  2309444 tt 2309445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 23291000 - 23291123
Alignment:
Q  16 ccatgaccccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgt 115  Q
    |||| ||||||||||||  | ||  ||| |||||||||||| ||||||||||||||| || ||||||| ||||||||||||| |||||||||||||||||    
T  23291000 ccatcaccccatgatttctggccaggctgagattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattctgccatgt 23291099  T
Q  116 cattcttgaatttttcttgataaa 139  Q
    ||||||| || |||||||||||||    
T  23291100 cattcttaaaattttcttgataaa 23291123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 17175942 - 17176060
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||||||||||||||||| ||  ||||||| ||||||||||||| ||||||||||| ||||||||||    
T  17175942 accccatgatttccggccaggctgagattttattggctaacattaatttcatgattatttcttgataaaatctaagggtgattattctgtcatgtcattc 17176041  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||| ||||||||    
T  17176042 ttgaaattttattgataaa 17176060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 18365518 - 18365612
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  18365518 agattttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaa 18365612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 18370782 - 18370876
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  18370782 agattttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaa 18370876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 8515647 - 8515764
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| ||| |  ||| |||||||||||||||||||||||||| |||||||||||| |||||||| || | ||||||||||||||||||||||    
T  8515647 accccatgatttccgatcaggctgagattttattggctaacattaatttcgggacaatttcttgataaaatcaaatg-tgattattctgccatgtcattc 8515745  T
Q  121 ttgaatttttcttgataaa 139  Q
    || ||| | ||||||||||    
T  8515746 ttaaatctgtcttgataaa 8515764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 6127394 - 6127301
Alignment:
Q  47 attttattggctaacattaattt-caggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||| || ||| ||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||    
T  6127394 attttattggctaacattaattttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaa 6127301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 25987050 - 25986956
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||| ||||  |||||||| |||||||||||||||||| ||||||| |||||    
T  25987050 agattttattggttaacattaatttcaggactatttcttgataaaatttaagagtgattattttgccatgtcattcttgaaattttcttaataaa 25986956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 32702325 - 32702239
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttc 131  Q
    |||||||||||| ||| |||||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||| |||||    
T  32702325 agattttattggttaatattaatttcaggactatttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttc 32702239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 6031662 - 6031777
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  |||  ||||||||||| |||||||||||||| ||| ||||||| ||||||| ||||| ||||||||||| ||||||||||    
T  6031662 accccatgatttccggccaggctgggattttattggttaacattaatttcaagactatttcttgataaaatttaagggtgattattctgtcatgtcattc 6031761  T
Q  121 ttgaatttttcttgat 136  Q
    || || |||| |||||    
T  6031762 ttaaaattttattgat 6031777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 18889683 - 18889737
Alignment:
Q  86 taaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  18889683 taaaatctaagggttattattctgccatgtcattcttgaaattttcttgataaat 18889737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 11548460 - 11548408
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||||||||| |||||||| |||||||||||||||||||  ||||||||||||    
T  11548460 aaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaat 11548408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 29693639 - 29693690
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||| | |||||||||||||||||||||| ||| ||||||||||||    
T  29693639 aaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaa 29693690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 2309294 - 2309249
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||||    
T  2309294 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 2309249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 2961726 - 2961797
Alignment:
Q  266 aaaatatgtatcgagtaaaatgatatcaaagggtgtaacattgttgtaacattcaattagtataatttgatc 337  Q
    |||||||||||||||||||| ||||| ||  ||||||| |||| ||||| |||  |||||| ||||||||||    
T  2961726 aaaatatgtatcgagtaaaacgatattaagcggtgtaaaattggtgtaatattacattagtgtaatttgatc 2961797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 29693516 - 29693478
Alignment:
Q  99 tgattattctgccatgtcattcttgaatttttcttgata 137  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  29693516 tgattattctgtcatgtcattcttgaatatttcttgata 29693478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 18889515 - 18889466
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgata 137  Q
    |||||||| | |||||||| |||||||||||||||||||  |||||||||    
T  18889515 aaatctaaaggtgattattgtgccatgtcattcttgaatcattcttgata 18889466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 28675342 - 28675387
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||| |||||||| || |||||||||||||||| ||||||    
T  28675342 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 28675387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 3e-39; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 10442710 - 10442828
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  10442710 accccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 10442809  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||||||||||||    
T  10442810 ttgaaattttcttgataaa 10442828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 21802267 - 21802361
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  21802267 agattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 21802361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 31078735 - 31078858
Alignment:
Q  16 ccatgaccccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgt 115  Q
    |||| |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  31078735 ccatcaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgt 31078834  T
Q  116 cattcttgaatttttcttgataaa 139  Q
    |||||||||| |||||||||||||    
T  31078835 cattcttgaaattttcttgataaa 31078858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 7745033 - 7745151
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  7745033 accccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 7745132  T
Q  121 ttgaatttttcttgataaa 139  Q
    || || |||||||||||||    
T  7745133 ttaaaattttcttgataaa 7745151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 24128383 - 24128269
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  24128383 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaaggatgattattctgccatgtcattc 24128284  T
Q  121 ttgaatttttcttga 135  Q
    ||||| |||||||||    
T  24128283 ttgaaattttcttga 24128269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 9089014 - 9088898
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  9089014 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 9088915  T
Q  121 ttgaatttttcttgata 137  Q
    ||||| |||||||||||    
T  9088914 ttgaaattttcttgata 9088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 17655572 - 17655462
Alignment:
Q  23 cccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattctt 122  Q
    |||||||||| || ||  ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  17655572 cccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 17655473  T
Q  123 gaatttttctt 133  Q
    ||| |||||||    
T  17655472 gaaattttctt 17655462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 47290210 - 47290096
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  47290210 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 47290111  T
Q  121 ttgaatttttcttga 135  Q
    ||||| |||||||||    
T  47290110 ttgaaattttcttga 47290096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 49387833 - 49387927
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  49387833 agattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 49387927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 33530635 - 33530727
Alignment:
Q  47 attttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||| ||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33530635 attttattggctaacattagtttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaa 33530727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 44893568 - 44893456
Alignment:
Q  23 cccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattctt 122  Q
    ||||||||||||| ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  44893568 cccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 44893469  T
Q  123 gaatttttcttga 135  Q
    ||| |||| ||||    
T  44893468 gaaatttttttga 44893456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 44893136 - 44893243
Alignment:
Q  23 cccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattctt 122  Q
    ||||||||||||| ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  44893136 cccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 44893235  T
Q  123 gaattttt 130  Q
    ||| ||||    
T  44893236 gaaatttt 44893243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 4751590 - 4751472
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| |||||   || |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| || |||||||||||||||||||    
T  4751590 accccatgatttccgaccagactgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtggttattctgccatgtcattc 4751491  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||| | |||||||||||||    
T  4751490 ttggaattttcttgataaa 4751472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 22199381 - 22199287
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  22199381 agattttattggctaacattagtttcaagactatttcttgataaaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaa 22199287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 24392787 - 24392697
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    ||||||||||| |||||||||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  24392787 agattttattgactaacattaatttcagtacaatttcttgataaaatttaagggtgattattctgccatgtcattcttgaatttttcttga 24392697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 36073067 - 36072973
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| || |||||||||||||||||||||||| |||||||||||||    
T  36073067 agattttattggttaacattaatttcaggactatttcttgataaaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaa 36072973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 42671789 - 42671695
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  42671789 agattttattggttaacattaattttaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttaaattttttttgataaa 42671695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 53123151 - 53123063
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  53123151 agattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttctt 53123063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 46441964 - 46441876
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  46441964 agattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattttgccatgtcattcttgaaattttctt 46441876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 23964410 - 23964504
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||| ||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||| || |||| ||||||||    
T  23964410 agattttattgactaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaa 23964504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 50156499 - 50156613
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||| | ||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  50156499 accccatgatttccggccaggctgagattttattggttaacattaattttatgactatttcttgataaaatctaagggtgattattctgccatgtcattc 50156598  T
Q  121 ttgaatttttcttga 135  Q
    || || |||||||||    
T  50156599 ttaaaattttcttga 50156613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 30563353 - 30563237
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||| |||||||||| ||||| |||||||| ||||||||||| ||||| ||||||||| |||||||     
T  30563353 accccatgatttccggccaggctgagattttattggccaacattaattgcaggataatttcttgataaaatctaaagatgactattctgccgtgtcattg 30563254  T
Q  121 ttgaatttttcttgata 137  Q
    |||||| ||||||||||    
T  30563253 ttgaatctttcttgata 30563237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 2624957 - 2624863
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||  |||||||||||||| ||  ||||||| ||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  2624957 agattttattgattaacattaatttcatgattatttcttgataaaatctaagggtgattattctgccatttcattcttgaaattttcttgataaa 2624863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 36073470 - 36073380
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||| |||||||||||||| ||  ||||||| ||||||| ||||| ||||||||||||||||||||||||||| |||||||||    
T  36073470 agattttattggttaacattaatttcatgaatatttcttgataaaatttaagggtgattattctgccatgtcattcttgaaattttcttga 36073380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 36073664 - 36073782
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || || | || |||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||| || ||||||||||    
T  36073664 accccatgatttccggccaaactgagattttattggctaatattaattttaggacaatttcttcataaaatctaaaagtgattattttgtcatgtcattc 36073763  T
Q  121 ttgaatttttcttgataaa 139  Q
    || ||| |||||| |||||    
T  36073764 ttaaatctttcttcataaa 36073782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 37934886 - 37934980
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||| |||||| |||||||||||||||  |||| ||||||||    
T  37934886 agattttattggttaacattaatttcaggataatttcttgataaaatctaagggtgagtattctaccatgtcattcttgacatttttttgataaa 37934980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 11314184 - 11314255
Alignment:
Q  50 ttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattct 121  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  11314184 ttattggctaacattaatttcagaacaatttcttgatataatctaaggatgattattctgtcatgtcattct 11314255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 37219745 - 37219657
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| ||||  |||||||| | |||||||||| || ||| ||||||    
T  37219745 agattttattgactaacattaatttcaggacaatttcttgataaaatttaagagtgattattttaccatgtcatttttaaatatttctt 37219657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 44744553 - 44744461
Alignment:
Q  47 attttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||| | ||||||| |||||||||||||||| || ||||||| ||||| |||||||||| |||||||||| || ||| |||||| |||||    
T  44744553 attttatcgactaacatcaatttcaggacaattttttgataaaatttaagggtgattattctaccatgtcatttttaaatatttcttaataaa 44744461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 37219825 - 37219876
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  37219825 aaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaa 37219876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 9089064 - 9089109
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||    
T  9089064 aaatctaaagatgattattgtgccatgtcattcttgaatttttctt 9089109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 53123225 - 53123270
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||    
T  53123225 aaatctaaagatgattattgtgccatgtcattcttgaatttttctt 53123270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 24392868 - 24392920
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    ||||||||||||||||||| ||| ||||||||||| ||| |||||||||||||    
T  24392868 aaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaat 24392920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 42671862 - 42671913
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||| ||||||||| || |||||||||||||||| ||||||||||||    
T  42671862 aaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaa 42671913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 318
Target Start/End: Complemental strand, 4635031 - 4634981
Alignment:
Q  268 aatatgtatcgagtaaaatgatatcaaagggtgtaacattgttgtaacatt 318  Q
    |||||| ||||||||||||||||| ||| |||||||||||| |||||||||    
T  4635031 aatatgcatcgagtaaaatgatattaaacggtgtaacattgatgtaacatt 4634981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 31078690 - 31078648
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaattttt 130  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
T  31078690 aaatctaaagatgattattgtgccatgtcattcttgaattttt 31078648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 36073543 - 36073588
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  36073543 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 36073588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 46442038 - 46442083
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  46442038 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 46442083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 49387758 - 49387713
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  49387758 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 49387713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 25063435 - 25063395
Alignment:
Q  99 tgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  25063435 tgattattctaccatgtcattcttgaatctttcttgataaa 25063395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 11314122 - 11314072
Alignment:
Q  89 aatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||| |||||||| || ||||||||||||| || ||||||||||||    
T  11314122 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaa 11314072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 10442658 - 10442613
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||    
T  10442658 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 10442613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 21802191 - 21802146
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||| |||||||| || |||||||||||||||| ||||||    
T  21802191 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 21802146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 23964335 - 23964290
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| |||||||||| ||||||||||||||| ||| ||||||    
T  23964335 aaatctaaagatgattattatgccatgtcattcttaaatctttctt 23964290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 30563403 - 30563452
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgata 137  Q
    |||||||||  |||||||| || |||||||||||||||| ||||||||||    
T  30563403 aaatctaagtgtgattattgtgtcatgtcattcttgaatctttcttgata 30563452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 36073145 - 36073190
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | || ||||| ||||||||||||||||||||||||||    
T  36073145 aaatctaaaggtggttattgtgccatgtcattcttgaatttttctt 36073190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 44893084 - 44893039
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||| ||||||||||    
T  44893084 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 44893039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 44893620 - 44893665
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||| ||||||||||    
T  44893620 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 44893665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 47290260 - 47290305
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| | ||||||||||||||||||||||||    
T  47290260 aaatctaaaggtgattattgtaccatgtcattcttgaatttttctt 47290305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 50156449 - 50156405
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||| |||||||| || |||||||||||||||||||||||    
T  50156449 aaatctaagg-tgattattatgtcatgtcattcttgaatttttctt 50156405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 4635248 - 4635300
Alignment:
Q  266 aaaatatgtatcgagtaaaatgatatcaaagggtgtaacattgttgtaacatt 318  Q
    ||||||| ||||||||||||| |||| ||| ||| |||||||| |||||||||    
T  4635248 aaaatatatatcgagtaaaattatattaaacggtataacattgatgtaacatt 4635300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 9293497 - 9293615
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  9293497 accccatgatttccggccaggctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattc 9293596  T
Q  121 ttgaatttttcttgataaa 139  Q
    |||||  ||||||||||||    
T  9293597 ttgaaaatttcttgataaa 9293615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 14941315 - 14941405
Alignment:
Q  49 tttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| |||||    
T  14941315 tttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaa 14941405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 31174779 - 31174873
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  31174779 agattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaa 31174873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 35160901 - 35160783
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  35160901 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 35160802  T
Q  121 ttgaatttttcttgataaa 139  Q
    || || |||||||||||||    
T  35160801 ttaaaattttcttgataaa 35160783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 43331030 - 43330942
Alignment:
Q  47 attttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  43331030 attttattggctaacattaatttcagtacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaattttttttga 43330942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 21936226 - 21936107
Alignment:
Q  21 accccatgattttcgacctagcta-agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcatt 119  Q
    |||||||||||| || ||  |||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||| |||||    
T  21936226 accccatgatttccggccaggctagagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatatcatt 21936127  T
Q  120 cttgaatttttcttgataaa 139  Q
    |||||| |||||||||||||    
T  21936126 cttgaaattttcttgataaa 21936107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 10662007 - 10661913
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||    
T  10662007 agattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaa 10661913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 23268007 - 23268097
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  23268007 agattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttga 23268097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 45 - 137
Target Start/End: Complemental strand, 3989196 - 3989104
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgata 137  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||    
T  3989196 agattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgata 3989104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 21393633 - 21393733
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaattttt 144  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||||||||||| |||||||||||| ||| ||||    
T  21393633 agattttattggttaacattaatttcagtacaatttcttgataaaatctaagggtgattattctaccatgtcattcttaaatttttcttgagaaaatttt 21393732  T
Q  145 t 145  Q
    |    
T  21393733 t 21393733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 7475429 - 7475543
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||  ||||||||||    
T  7475429 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctatcatgtcattc 7475528  T
Q  121 ttgaatttttcttga 135  Q
    ||||| |||||||||    
T  7475529 ttgaaattttcttga 7475543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 13354966 - 13354872
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| | ||||||||||||| ||||||||||| |||||||||||||    
T  13354966 agattttattggctaacattaatttcaagactatttcttgataaaatctaagggtaattattctgccatatcattcttgaaattttcttgataaa 13354872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 22591602 - 22591508
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||  |||||||||||||| |||||||||||||||| || |||||    
T  22591602 agattttattggctaacattaatttcaggacaatttcttaataaaatttaagggggattattctgccatatcattcttgaattttttttaataaa 22591508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 33380351 - 33380237
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||    
T  33380351 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattcagccatgtcattc 33380252  T
Q  121 ttgaatttttcttga 135  Q
    || || |||||||||    
T  33380251 ttaaaattttcttga 33380237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 27847752 - 27847658
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||| |||||||||||||||||||||||| || ||||||||||| | ||||||||||| |||||||||||||||| |||||| |||||    
T  27847752 agattttattgactaacattaatttcaggacaattttttgataaaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaa 27847658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 9723525 - 9723431
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||||| ||||| ||||||||||| |||||||||||| ||| |||||| |||||    
T  9723525 agattttattagctaacattaatttcgggacaatttcttgataaaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaa 9723431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 37335829 - 37335745
Alignment:
Q  49 tttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    ||||||||||||||||||| |||| ||||||| || ||| |||||||   |||||||||||||||||||||||||||| ||||||    
T  37335829 tttattggctaacattaatatcagaacaattttttgatacaatctaaaagtgattattctgccatgtcattcttgaatctttctt 37335745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 16767417 - 16767480
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattct 108  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| ||||  ||||||||||    
T  16767417 agattttattggctaacattaatttcaggataatttcttgataaaatttaagagtgattattct 16767480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 22592905 - 22592957
Alignment:
Q  87 aaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||| |||||||| || |||||||||||||||| ||||||||||||    
T  22592905 aaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaa 22592957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 40262681 - 40262729
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatct 93  Q
    |||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  40262681 agattttattggctaatattaatttcgggacaatttcttgataaaatct 40262729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 33380401 - 33380446
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  33380401 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 33380446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 35160953 - 35160998
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  35160953 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 35160998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 43331106 - 43331158
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||||||| | |||||||| | ||||||||||||||||| |||||||||||||    
T  43331106 aaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaat 43331158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 9293446 - 9293401
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||| |||||||| || |||||||||||||||| ||||||    
T  9293446 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 9293401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 10662082 - 10662127
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| || |||||||||||||||||||||||    
T  10662082 aaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt 10662127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 13837244 - 13837195
Alignment:
Q  266 aaaatatgtatcgagtaaaatgatatcaaagggtgtaacattgttgtaac 315  Q
    |||||||| |||||||||||||||||  || |||||||||||| ||||||    
T  13837244 aaaatatgcatcgagtaaaatgatattgaacggtgtaacattgatgtaac 13837195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 23267933 - 23267888
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||| ||||||||||    
T  23267933 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 23267888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 34321028 - 34320991
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaa 125  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  34321028 aaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 9723600 - 9723648
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgat 136  Q
    |||||||| | ||||||||||| |||||||||||| ||| |||||||||    
T  9723600 aaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgat 9723648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 14941235 - 14941199
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttga 124  Q
    ||||||||||||||||||| || ||||||||||||||    
T  14941235 aaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 16767333 - 16767285
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgat 136  Q
    |||||||||  |||||||| || |||||||||||||||| |||||||||    
T  16767333 aaatctaagagtgattattgtgtcatgtcattcttgaatctttcttgat 16767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 21393556 - 21393505
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||| ||||| |||||||| || ||||||||||||||| ||||||||||||||    
T  21393556 aaatttaagggtgattattgtgtcatgtcattcttgaa-ttttcttgataaat 21393505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 12986 - 12872
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  12986 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaaggatgattattctgccatgtcattc 12887  T
Q  121 ttgaatttttcttga 135  Q
    ||||| |||||||||    
T  12886 ttgaaattttcttga 12872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 47994 - 47876
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  47994 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 47895  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||||||||||||    
T  47894 ttgaaattttcttgataaa 47876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 48043 - 48088
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| |||||||||| ||| ||||||||||||||| ||||||    
T  48043 aaatctaaagatgattattgtgctatgtcattcttgaatctttctt 48088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 8e-37; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 11361052 - 11361170
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  11361052 accccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 11361151  T
Q  121 ttgaatttttcttgataaa 139  Q
    || || |||||||||||||    
T  11361152 ttaaaattttcttgataaa 11361170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 22912999 - 22913089
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22912999 agattttattggctaacattaatttcagtacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatttttcttga 22913089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 8145517 - 8145401
Alignment:
Q  23 cccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattctt 122  Q
    |||||||||| |||||  ||| ||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  8145517 cccatgatttccgaccaggctgagattttattggctaacattagtttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattctt 8145418  T
Q  123 gaatttttcttgataaa 139  Q
    ||| |||||||||||||    
T  8145417 gaaattttcttgataaa 8145401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 17545630 - 17545730
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaattttt 144  Q
    ||||||||||| |||||||||||||||| |||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  17545630 agattttattgactaacattaatttcagtacaatttcttgataaaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttt 17545729  T
Q  145 t 145  Q
    |    
T  17545730 t 17545730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 137
Target Start/End: Original strand, 31640861 - 31640977
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||| || |||||||||||||||||||    
T  31640861 accccatgatttccggccaggctgagattttattggctaacattaatttcatgacaatttcttgataaaatctaagggtggttattctgccatgtcattc 31640960  T
Q  121 ttgaatttttcttgata 137  Q
    |||||| ||||||||||    
T  31640961 ttgaatctttcttgata 31640977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 12614678 - 12614772
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||||||| ||||||||||||    
T  12614678 agattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaa 12614772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 14138812 - 14138694
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| ||| |  ||| ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||||||| ||||    
T  14138812 accccatgatttccgatcaggctgagattttattggctaacattaatttcaggactatttcttgataaaatttaagggtgattattctgccatgtaattc 14138713  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||||||||||||    
T  14138712 ttgaaattttcttgataaa 14138694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 4892346 - 4892232
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  4892346 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 4892247  T
Q  121 ttgaatttttcttga 135  Q
    || || |||||||||    
T  4892246 ttaaaattttcttga 4892232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 25398382 - 25398268
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  25398382 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 25398283  T
Q  121 ttgaatttttcttga 135  Q
    || || |||||||||    
T  25398282 ttaaaattttcttga 25398268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 38899647 - 38899765
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    ||||||||||||||| ||   || |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| || |||||||||||||||||||    
T  38899647 accccatgattttcggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtggttattctgccatgtcattc 38899746  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||| | |||||||||||||    
T  38899747 ttggaattttcttgataaa 38899765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 2477780 - 2477662
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| | ||||||||| ||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  2477780 accccatgatttccggccaggctgaaattttattgactaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattc 2477681  T
Q  121 ttgaatttttcttgataaa 139  Q
    || || |||||||||||||    
T  2477680 ttaaaattttcttgataaa 2477662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 3362898 - 3362804
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| || |||||||||||||||||||||| | |||||||||||||    
T  3362898 agattttattggttaacattaatttcaggactatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaa 3362804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 3521927 - 3522041
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || || | ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||| | |||||||||||||||||||||     
T  3521927 accccatgatttccggccaaactaagattttattggttaacattaatttcagaactatttcttgataaaatctaatggtgattattctgccatgtcattt 3522026  T
Q  121 ttgaatttttcttga 135  Q
    ||||| |||||||||    
T  3522027 ttgaaattttcttga 3522041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 6043432 - 6043550
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| ||| ||||||||||| || ||||||| ||||||||||||| |||||||||| |||||||||||    
T  6043432 accccatgatttccggccaggctgagattttattggttaatattaatttcagcactatttcttgataaaatctaagggtgattattcttccatgtcattc 6043531  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||||||||||||    
T  6043532 ttgaaattttcttgataaa 6043550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 12850945 - 12850827
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| || ||||||||||||||||||     
T  12850945 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtggttattctgccatgtcattt 12850846  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||| | |||||||||||||    
T  12850845 ttggaattttcttgataaa 12850827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 33584250 - 33584364
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||||||||||||    
T  33584250 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatttaagggtgattattctgccatgtcattc 33584349  T
Q  121 ttgaatttttcttga 135  Q
    || || |||||||||    
T  33584350 ttaaaattttcttga 33584364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 37321738 - 37321832
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||| ||| |||| || ||||||| ||||| |||||||||||||||||||||||| || |||||||||||||    
T  37321738 agattttattggctaacattaatttcaagactatttattgataaaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaa 37321832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 4433952 - 4434040
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||||| ||||||||||||||| || ||||||| ||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  4433952 agattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttctt 4434040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 27481940 - 27481852
Alignment:
Q  47 attttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||   ||||||||   ||||||||||||||||||||||||||||||    
T  27481940 attttattggctaacattaatttcgtgacaatttcttcataaaa-ctaaatgtgattatt---ccatgtcattcttgaatttttcttgataaa 27481852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 22912928 - 22912876
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  22912928 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaat 22912876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 10458463 - 10458417
Alignment:
Q  99 tgattattctgccatgtcattcttgaatttttcttgataaatttttt 145  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||    
T  10458463 tgattattttgccatgtcattcttgaatttttcttgataaaattttt 10458417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 11890244 - 11890297
Alignment:
Q  265 gaaaatatgtatcgagtaaaatgatatcaaagggtgtaacattgttgtaacatt 318  Q
    ||||||||||||||||||||||||||| ||| ||||||||| || |||||||||    
T  11890244 gaaaatatgtatcgagtaaaatgatattaaacggtgtaacaatggtgtaacatt 11890297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 4892396 - 4892441
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  4892396 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 4892441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 11361002 - 11360957
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||    
T  11361002 aaatctaaagatgattattgtgccatgtcattcttgaatctttctt 11360957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 31640800 - 31640763
Alignment:
Q  100 gattattctgccatgtcattcttgaatttttcttgata 137  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  31640800 gattattctgccatgtcattcttgaatctttcttgata 31640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 33584200 - 33584155
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  33584200 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 33584155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 17545553 - 17545501
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    ||||||||||||||||||| || |||||||||||| ||| ||| |||||||||    
T  17545553 aaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaat 17545501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 3521878 - 3521833
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||| ||||||||||    
T  3521878 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 3521833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 6043383 - 6043338
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||| ||||||||||    
T  6043383 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 6043338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 8145567 - 8145612
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||    
T  8145567 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 8145612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 12850996 - 12851041
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | || ||||| ||||||||||||||||||||||||||    
T  12850996 aaatctaaaggtggttattgtgccatgtcattcttgaatttttctt 12851041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 14138861 - 14138906
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||    
T  14138861 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 14138906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 25398432 - 25398477
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| |||||||||||| |||||||||||||    
T  25398432 aaatctaaaggtgattattgtgccatgtcattgttgaatttttctt 25398477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 76
Target Start/End: Original strand, 36880270 - 36880299
Alignment:
Q  47 attttattggctaacattaatttcaggaca 76  Q
    ||||||||||||||||||||||||||||||    
T  36880270 attttattggctaacattaatttcaggaca 36880299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 27482016 - 27482068
Alignment:
Q  87 aaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||| | |||||||||||  ||||||||||||||| ||| ||||||||    
T  27482016 aaaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaa 27482068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 8e-37; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 8361990 - 8362080
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8361990 agattttattggctaacattaatttcagtacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatttttcttga 8362080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 6042004 - 6041910
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  6042004 agattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaa 6041910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 41883168 - 41883260
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgata 137  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  41883168 agattttattgactaacattaatttcgggacaatttcttgataaaatttaagggtgattattctgccatgtcattcttgaatttttcttgata 41883260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 3137330 - 3137449
Alignment:
Q  16 ccatgaccccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgt 115  Q
    |||| |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||    
T  3137330 ccatcaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattttgccatgt 3137429  T
Q  116 cattcttgaatttttcttga 135  Q
    |||||||||| |||||||||    
T  3137430 cattcttgaaattttcttga 3137449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 3574447 - 3574566
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaattt-caggacaatttcttcataaaatctaaggatgattattctgccatgtcatt 119  Q
    |||||||||||| || || |||| ||||||||||||||||||||||||| || ||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  3574447 accccatgatttccggccaagctgagattttattggctaacattaattttcaagactatttcttgataaaatctaagggtgattattctgccatgtcatt 3574546  T
Q  120 cttgaatttttcttgataaa 139  Q
    ||| || |||||||||||||    
T  3574547 cttaaaattttcttgataaa 3574566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 9796974 - 9797064
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    ||||||||||||||||||||||||| || |||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  9796974 agattttattggctaacattaatttaagtacaatttcttgataaaatctaatggtgattattctgccatgtcattcttgaatttttcttga 9797064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 30385155 - 30385037
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||     
T  30385155 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatataagggtgattattctgccatgtcattt 30385056  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||||||||||||    
T  30385055 ttgaaattttcttgataaa 30385037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 33145832 - 33145755
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattctt 122  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  33145832 agattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattctt 33145755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 33113911 - 33113819
Alignment:
Q  47 attttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||||| |||||    
T  33113911 attttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtaattcttgaaattttcttaataaa 33113819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 2754837 - 2754743
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||| | |||||||||||||||||||||||| || |||||||||||||    
T  2754837 agattttattggttaacattaatttcaggactatttcttgataaaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaa 2754743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 11347388 - 11347294
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||||||| | |||||||||||||||||||||| || |||||||||||||    
T  11347388 agattttattggctaacattaatttcaggactatttcctgataaaatctaagggttattattctgccatgtcattcttaaaattttcttgataaa 11347294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 34482831 - 34482945
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| |||||||||| |||| ||||||    
T  34482831 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctaccatatcattc 34482930  T
Q  121 ttgaatttttcttga 135  Q
    ||||| |||||||||    
T  34482931 ttgaaattttcttga 34482945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 47738225 - 47738131
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||| | | ||||||||||||| |||||||||||| ||||||||||||    
T  47738225 agattttattggctaacattaatttcaggacaatttttttataaaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaa 47738131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 3089561 - 3089460
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || || |||| ||||||||||||||||||||||||||| ||  ||||||| ||||||||||||| ||||||||||||||||||||||    
T  3089561 accccatgatttccggccaagctgagattttattggctaacattaatttcaagaatatttcttgataaaatctaagggtgattattctgccatgtcattc 3089462  T
Q  121 tt 122  Q
    ||    
T  3089461 tt 3089460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 22426291 - 22426383
Alignment:
Q  47 attttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||| || || |||||||||||||    
T  22426291 attttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcatttttaaaattttcttgataaa 22426383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 3456184 - 3456090
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| ||||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||| |||||||| || |||||||||||||    
T  3456184 agattttattggttaacattaattccaggactatttcttgataaaatctaagggtgattattctgccatatcattcttaaaattttcttgataaa 3456090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 37216998 - 37217092
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| |||||||||||||| ||| ||||||| ||||||| ||||| |||||||||||||||||||||||| || |||||||||||||    
T  37216998 agattttattggttaacattaatttcatgactatttcttgataaaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaa 37217092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 48161025 - 48160931
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||| |||||||||| ||| ||||||| ||||||||||||| ||||||||||||||| |||||||| || |||||||||||||    
T  48161025 agattttattggctaatattaatttcaagactatttcttgataaaatctaagggtgattattctgccatatcattcttaaaattttcttgataaa 48160931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 19650820 - 19650939
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaattt-caggacaatttcttcataaaatctaaggatgattattctgccatgtcatt 119  Q
    |||||||||||| || || |||| ||||||||| ||||||||||||||| || |||  |||||| ||||||||||| | |||||||||||||||||||||    
T  19650820 accccatgatttccggccaagctgagattttatcggctaacattaattttcaagactgtttcttgataaaatctaatggtgattattctgccatgtcatt 19650919  T
Q  120 cttgaatttttcttgataaa 139  Q
    ||| || |||||||||||||    
T  19650920 cttaaaattttcttgataaa 19650939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 42297474 - 42297379
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattct-gccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||||||| || ||||||| ||||||||||||| |||||||||| | |||||||||||| || |||||||||||||    
T  42297474 agattttattggctaacattaatttcagaactatttcttgataaaatctaagggtgattattctagtcatgtcattcttaaaattttcttgataaa 42297379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 8320529 - 8320623
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||| |||||||| |||||| |||||||| || |||||||||||||    
T  8320529 agattttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattattttgccatatcattcttaaaattttcttgataaa 8320623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 24343667 - 24343573
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||||||||  ||||||||||||||| | | | |||||||||||||||||||    
T  24343667 agattttattggctaacattaatttcggaacaatttcttgataaaatctaagagtgattattctgccatattaattttgaatttttcttgataaa 24343573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 33839651 - 33839557
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||||||| | ||||||||||| ||||| |||||| ||||||| ||||||||    
T  33839651 agattttattggctaacattaatttcaaaacaatttcttgataaaatctaatggtgattattctgtcatgttattcttaaattttttttgataaa 33839557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 41224377 - 41224263
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| ||||| | |  |||||||||| ||||||||||||||||  |||||||||| |||||||  |||| |||| ||||| |||||||||||    
T  41224377 accccatgatttccgacccaacagagattttattagctaacattaatttcaatacaatttcttaataaaattcaagggtgataattctaccatgtcattc 41224278  T
Q  121 ttgaatttttcttga 135  Q
    |||||||||||||||    
T  41224277 ttgaatttttcttga 41224263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 36864972 - 36865066
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||| ||||||||||||||||||||||||| |||| || |||||| |||||| |||||||||| ||||||||||||| || ||||||| |||||    
T  36864972 agattctattggctaacattaatttcaggactattttttgataaaacctaagggtgattattctaccatgtcattcttaaaattttcttaataaa 36865066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 37522173 - 37522083
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||| |||||||||||||| ||| ||||||| ||||||||| ||| ||||||||||| |||||||||||| || |||||||||    
T  37522173 agattttattggttaacattaatttcatgactatttctttataaaatcttagggtgattattctgtcatgtcattcttaaaattttcttga 37522083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 42297984 - 42297920
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctg 109  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||    
T  42297984 agattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctg 42297920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 42921263 - 42921169
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||| |   || |||| | |||||||||||| || |||||||||||||    
T  42921263 agattttattggctaacattaaattcaggacaatttcttgataaaatctaaaggcaatcattcggtcatgtcattcttaaaattttcttgataaa 42921169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 40327945 - 40327897
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatct 93  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40327945 agattttattggctaacattaatttcaggacaatttcttgataaaatct 40327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 26612890 - 26612811
Alignment:
Q  60 acattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||| ||||| |||| || |||||||||||  ||| ||||||||||||||||||||||||||||| || |||||    
T  26612890 acattaatttaaggactattttttaataaaatctaaaaatggttattctgccatgtcattcttgaatttttttttataaa 26612811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 47738305 - 47738356
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  47738305 aaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaa 47738356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 8361910 - 8361858
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||||||||| |||||||| || |||||||||||||||| |||||||||||||    
T  8361910 aaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaat 8361858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 41224428 - 41224480
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||| ||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  41224428 aaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaat 41224480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 40328025 - 40328076
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||| |||||||| || |||||||||||||||| ||||||||||||    
T  40328025 aaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaa 40328076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 46919020 - 46918934
Alignment:
Q  47 attttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| |||||||||||||||  ||||||||||| ||||||||||| | | ||||||||  ||| ||||| || ||| ||||||    
T  46919020 attttatttgctaacattaatttcgagacaatttcttgataaaatctaaaggtaattattctatcatatcatttttaaatatttctt 46918934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 3137285 - 3137240
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  3137285 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 3137240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 34482759 - 34482714
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  34482759 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 34482714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 9796900 - 9796848
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||||||||  |||||||| || |||||||||||||||| |||||||||||||    
T  9796900 aaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaat 9796848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 33839729 - 33839780
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||| ||||| |||||||| || |||||||||||||||| ||||||||||||    
T  33839729 aaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaa 33839780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 36864904 - 36864853
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||| |||||||| || |||||||||||||||| ||| ||||||||    
T  36864904 aaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaa 36864853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 8320453 - 8320408
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||    
T  8320453 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 8320408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 30385594 - 30385639
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||    
T  30385594 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 30385639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 33113988 - 33114033
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||    
T  33113988 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 33114033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 33145906 - 33145951
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||||| |||||||| || |||||||||||||||| ||||||    
T  33145906 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 33145951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 37522247 - 37522292
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||| ||||||||||    
T  37522247 aaatctaaaggtgattattatgccatgtcattcttaaatttttctt 37522292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 46919099 - 46919139
Alignment:
Q  99 tgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||| |||||| ||| ||||||||    
T  46919099 tgattattctgccatgtcattattgaatcttttttgataaa 46919139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 8e-37; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 40215132 - 40215014
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  40215132 accccatgatttccggccaggctgagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattc 40215033  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||||||||||||    
T  40215032 ttgaaattttcttgataaa 40215014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 37821755 - 37821869
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    ||||||||||||||| ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||    
T  37821755 accccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatatcattc 37821854  T
Q  121 ttgaatttttcttga 135  Q
    ||||| |||||||||    
T  37821855 ttgaaattttcttga 37821869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 44094818 - 44094724
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  44094818 agattttattggctaacattaatttcaggattatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 44094724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 6883631 - 6883519
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  6883631 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 6883532  T
Q  121 ttgaatttttctt 133  Q
    ||||| |||||||    
T  6883531 ttgaaattttctt 6883519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 27523171 - 27523294
Alignment:
Q  16 ccatgaccccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgt 115  Q
    |||| |||||||||||| || ||  | | |||||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||||||| |||||    
T  27523171 ccatcaccccatgatttccggccaggatgagattttattggctaacattaatttcgggacaatttcttgataaaatttaagggtgattattctgtcatgt 27523270  T
Q  116 cattcttgaatttttcttgataaa 139  Q
    ||||||| ||||||||||||||||    
T  27523271 cattcttaaatttttcttgataaa 27523294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 33786580 - 33786675
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  33786580 agattttattggctaacattaatttcagtacaatttcttgataaaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaat 33786675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 9910238 - 9910328
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  9910238 agattttattggttaacattaatttcaggactatttcttgataaaatctaaggttgattattctgccatgtcattcttgaaattttcttga 9910328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 18404586 - 18404468
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||| ||||||| ||||| | || ||||||||||||||||||||||||||||||| ||||||| ||||||||||| | |||||||||| |||||||||||    
T  18404586 accctatgatttccgaccaaactgagattttattggctaacattaatttcaggactatttcttgataaaatctaaaggtgattattctaccatgtcattc 18404487  T
Q  121 ttgaatttttcttgataaa 139  Q
    || || |||||||||||||    
T  18404486 ttaaaattttcttgataaa 18404468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 19015548 - 19015434
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||    
T  19015548 accccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatatcattc 19015449  T
Q  121 ttgaatttttcttga 135  Q
    ||||| |||||||||    
T  19015448 ttgaaattttcttga 19015434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 25463820 - 25463702
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  25463820 accccatgatttccggccaggctgagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattc 25463721  T
Q  121 ttgaatttttcttgataaa 139  Q
    || || ||||||| |||||    
T  25463720 ttaaaattttcttcataaa 25463702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 32000212 - 32000302
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  32000212 agattttattggctaacattaatttcagtacaatttcttgataaaatctaagggtggttattctgtcatgtcattcttgaatttttcttga 32000302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 40273822 - 40273732
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| || |||||||||||||||||||||||||    
T  40273822 agattttattggctaacattaatttcagtacaatttcttaataaaatctaagggtgattattttgacatgtcattcttgaatttttcttga 40273732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 16045746 - 16045837
Alignment:
Q  48 ttttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||| ||  ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  16045746 ttttattggctaacattaatttcaagaatatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 16045837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 3559761 - 3559643
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||| ||||||||||||||||||||||    
T  3559761 accccatgatttccgcccaggctgagattttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattattctgccatgtcattc 3559662  T
Q  121 ttgaatttttcttgataaa 139  Q
    || || |||| ||||||||    
T  3559661 ttaaaatttttttgataaa 3559643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 36966653 - 36966743
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttga 135  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  36966653 agattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcttga 36966743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 41876363 - 41876477
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    ||||||||||||||| ||  ||| |||||||||||| |||||||||||||||||| ||||||| |||||| |||||| ||||||||||||||||||||||    
T  41876363 accccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaacctaagggtgattattctgccatgtcattc 41876462  T
Q  121 ttgaatttttcttga 135  Q
    || || |||| ||||    
T  41876463 ttaaaatttttttga 41876477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 25973533 - 25973440
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||    
T  25973533 agattttattggctaacattaatttcaggattatttcttgataaaatctaagggtgattattctgcc-tgtcattcttgaaattttcatgataaa 25973440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 51737649 - 51737535
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||||||  |  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||| | ||||||    
T  51737649 accccatgattttcggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaaatttaagggtgattattctgccttatcattc 51737550  T
Q  121 ttgaatttttcttga 135  Q
    || || |||||||||    
T  51737549 ttaaaattttcttga 51737535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 10167518 - 10167428
Alignment:
Q  47 attttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgata 137  Q
    ||||||||||||||||||||||| | |||||||| || |||||||||||  |||||||||||  |||||||||||| ||| ||||||||||    
T  10167518 attttattggctaacattaatttaaagacaattttttgataaaatctaaaaatgattattctatcatgtcattcttaaatctttcttgata 10167428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 34519874 - 34519784
Alignment:
Q  49 tttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||  ||||||||| | ||| |||| |||||| |||||| |||||    
T  34519874 tttattggctaacattaatttcaggacaattttttgataaaatctaaggtcgattattcttctatggcatttttgaatctttcttaataaa 34519784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 44690974 - 44691068
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||||||||||||||||  ||| |||||||| ||||||||||||  | ||||||||||||||| |||||||||| ||| || |||||    
T  44690974 agattttattggctaacattaattttgggataatttcttgataaaatctaagagttattattctgccatgtaattcttgaatctttttttataaa 44691068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 20305054 - 20305123
Alignment:
Q  23 cccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatc 92  Q
    ||||||||||||| || |||| ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  20305054 cccatgattttcggccaagctgagattttattggctaacattaatttcaggattatttcttgataaaatc 20305123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 44690892 - 44690842
Alignment:
Q  89 aatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  44690892 aatctaagggtgattattctgccatgtcattcttgaatctttcttgataaa 44690842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 32000137 - 32000085
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  32000137 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaat 32000085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 33786502 - 33786450
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  33786502 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaat 33786450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 40273902 - 40273954
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaat 140  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  40273902 aaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaat 40273954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 9910162 - 9910117
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  9910162 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 9910117  T

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Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 19015598 - 19015643
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  19015598 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 19015643  T

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Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 51737699 - 51737744
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  51737699 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 51737744  T

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Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 51621050 - 51621002
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatct 93  Q
    ||||||||||| |||||||||||||| |||| ||||||| |||||||||    
T  51621050 agattttattgactaacattaatttctggactatttcttaataaaatct 51621002  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 52064445 - 52064398
Alignment:
Q  92 ctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||| ||| ||||||| |||||||||||||||| ||||||||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaa 52064398  T

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Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 126
Target Start/End: Original strand, 52329469 - 52329507
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaat 126  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  52329469 aaatctaagggtgattattctgctatgtcattcttgaat 52329507  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 6883681 - 6883726
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | ||| |||| ||||||||||||||||||||||||||    
T  6883681 aaatctaaaggtgaatattatgccatgtcattcttgaatttttctt 6883726  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 20305001 - 20304956
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||    
T  20305001 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 20304956  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 36966579 - 36966534
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| |||||||| |||||||||||||||||    
T  36966579 aaatctaaaggtgattattgtgccatgttattcttgaatttttctt 36966534  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 37821705 - 37821660
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| || |||||||||||||||||||||||    
T  37821705 aaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt 37821660  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 40215182 - 40215227
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||    
T  40215182 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 40215227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 41876313 - 41876268
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||| ||||||||||||||||||||||    
T  41876313 aaatctaaaggtgattattgtgctatgtcattcttgaatttttctt 41876268  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 51622025 - 51622053
Alignment:
Q  98 atgattattctgccatgtcattcttgaat 126  Q
    |||||||||||||||||||||||||||||    
T  51622025 atgattattctgccatgtcattcttgaat 51622053  T

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Target: scaffold0204 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 4540 - 4426
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    ||||||||||||||| ||  ||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  4540 accccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattc 4441  T
Q  121 ttgaatttttcttga 135  Q
    || || |||||||||    
T  4440 ttaaaattttcttga 4426  T

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Target: scaffold0178 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 11765 - 11647
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    ||||||||||||||| ||  ||| |||||||||||| |||||||||||||| ||| ||||||| ||||||||||||| ||||||||||| ||||||||||    
T  11765 accccatgattttcggccaggctgagattttattggttaacattaatttcatgactatttcttgataaaatctaagggtgattattctgtcatgtcattc 11666  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||||||||||||    
T  11665 ttgaaattttcttgataaa 11647  T

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Target: scaffold0178; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 11815 - 11860
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||| ||||||||||    
T  11815 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt 11860  T

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Target: scaffold0096 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 41155 - 41037
Alignment:
Q  21 accccatgattttcgacctagctaagattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattc 120  Q
    |||||||||||| || ||  ||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  41155 accccatgatttccggccaggctgagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattc 41056  T
Q  121 ttgaatttttcttgataaa 139  Q
    ||||| |||| ||||||||    
T  41055 ttgaaatttttttgataaa 41037  T

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Target: scaffold0228 (Bit Score: 71; Significance: 5e-32; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 8522 - 8428
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| ||||||||||||||| || ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  8522 agattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 8428  T

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Target: scaffold0228; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 16104 - 16010
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| ||||||||||||||| || ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  16104 agattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 16010  T

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Target: scaffold0228; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 26056 - 25962
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    |||||||||||| ||||||||||||||| || ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  26056 agattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 25962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 16178 - 16223
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||    
T  16178 aaatctaaagatgattattgtgccatgtcattcttgaatttttctt 16223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 26130 - 26175
Alignment:
Q  88 aaatctaaggatgattattctgccatgtcattcttgaatttttctt 133  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  26130 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 26175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 3188 - 3094
Alignment:
Q  45 agattttattggctaacattaatttcaggacaatttcttcataaaatctaaggatgattattctgccatgtcattcttgaatttttcttgataaa 139  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||| || |||| ||||||||    
T  3188 agattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttattgataaa 3094  T

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