View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14793_high_30 (Length: 231)
Name: NF14793_high_30
Description: NF14793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14793_high_30 |
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Alignment Details
Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 21676064 - 21676261
Alignment:
| Q |
20 |
tcaactgctccgcatagtcgtcccaaagagtgcagtgaattcgatttccactgcaatataacatacataagaaatcacagcaatacatcgttgctaatta |
119 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| | || |||||| |
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| T |
21676064 |
tcaactgctccgcatagtcgtcccaaagagtgcagtgaattcgatttccactgcaatataacatatataagaaatcaaagcaatacaccctttttaatta |
21676163 |
T |
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| Q |
120 |
cctatatgttaattagacagacttactccaaatcctccaatgtagcatccataaccttgttggtcttcccgnnnnnnnnagtcactttcagttcatct |
217 |
Q |
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|||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
21676164 |
cctatatgctaattagacaaacttactccaagtcctccaatgtagcatccataaccttgttggtcttcccgttcttttcagtcactttcagttcatct |
21676261 |
T |
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