View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14793_high_6 (Length: 459)
Name: NF14793_high_6
Description: NF14793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14793_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 10 - 292
Target Start/End: Complemental strand, 27025282 - 27025000
Alignment:
| Q |
10 |
gtatgtatagtattaggtacacaacaatctcaatatgtatgtctagtattaggtacataataatctcaattttggatatatacttcttgatgtatattgt |
109 |
Q |
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| T |
27025282 |
gtatgtatagtattaggtacacagcaatctcaatatgtatgtctagtattaggtacataataatctcaattttggatatatacttcttgatgtatattgt |
27025183 |
T |
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| Q |
110 |
taaaattgttgaattctggagacatgctttcaaaatttagttaagtttaactagaactaaactcgtagaagctactaaaaccttcgtaaaaaagtaaatt |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27025182 |
taaaattgttgaattctggagacatgctttcaaaatttagttaagtttaactagaactaaactcgtagaagctactaaaaccttcgtaaaaaagtaaatt |
27025083 |
T |
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| Q |
210 |
ttatttaaacattttctgtttttaaagtgattgtatgaactgtgtaggtgacacctactgcacaacctcctcatgcatcctcc |
292 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27025082 |
ttatttaaacattttctgtttttaaagtgattgtatgaactgtgtaggtgacacctactgcacaacctcctcatgcatcctcc |
27025000 |
T |
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