View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14794_low_10 (Length: 302)
Name: NF14794_low_10
Description: NF14794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14794_low_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 10680316 - 10680617
Alignment:
| Q |
1 |
atacaacatactcccaagtcccacccgtgcatcagcacatcccctcaaatctcaaccattggattgataaaatagcacctctacgagattaattcaacaa |
100 |
Q |
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||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
10680316 |
atacagcatactcccaagtcccacccgtacatcagcacatcccctcaaatctcaaccattggattgataaaatagcacctctacgagattaatccaacaa |
10680415 |
T |
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| Q |
101 |
ttaataagatttggatggagcagcagaagagcctccactcgctccatttaaatctcagttgttggactaatctaatagttgagatctctctcagccatta |
200 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
10680416 |
ttaataagatttggatggagcagcaggagagcctccactcgctccatttaaatctcagtcgttggactaatctaatagttgagatctctctcagccatta |
10680515 |
T |
|
| Q |
201 |
aattaatataatgagtgaggtttggttcgagcagcaagataggtgacagaggactaatctccctctgtacaattatgaactatgcaaagtttcacttcct |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10680516 |
aattaatataatgagtgaggtttggttcgagcagcaagataggtgacagaggactaatctccctctgtacaattatgaactatgcaaagtttcacttcct |
10680615 |
T |
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| Q |
301 |
at |
302 |
Q |
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|| |
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| T |
10680616 |
at |
10680617 |
T |
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