View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14794_low_13 (Length: 292)

Name: NF14794_low_13
Description: NF14794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14794_low_13
NF14794_low_13
[»] chr2 (73 HSPs)
chr2 (24-292)||(13538349-13538618)
chr2 (132-281)||(41543942-41544092)
chr2 (159-276)||(32859755-32859872)
chr2 (99-288)||(33454926-33455115)
chr2 (130-276)||(18684330-18684478)
chr2 (175-276)||(2825991-2826092)
chr2 (132-251)||(14663171-14663291)
chr2 (126-250)||(38292364-38292489)
chr2 (147-276)||(5961970-5962101)
chr2 (158-277)||(6761744-6761863)
chr2 (161-252)||(8964386-8964477)
chr2 (159-276)||(1334903-1335020)
chr2 (175-276)||(3882586-3882687)
chr2 (153-254)||(44195499-44195600)
chr2 (149-248)||(40347956-40348055)
chr2 (139-273)||(6334671-6334805)
chr2 (147-276)||(20064881-20065010)
chr2 (175-276)||(20128300-20128401)
chr2 (128-236)||(35317831-35317939)
chr2 (159-274)||(15120065-15120181)
chr2 (160-247)||(9153494-9153581)
chr2 (147-278)||(33634805-33634936)
chr2 (107-276)||(16717581-16717747)
chr2 (159-273)||(19890208-19890322)
chr2 (159-225)||(31017327-31017393)
chr2 (132-226)||(33962935-33963029)
chr2 (231-276)||(15816795-15816840)
chr2 (132-248)||(22440135-22440251)
chr2 (108-281)||(29685672-29685845)
chr2 (154-281)||(2769259-2769386)
chr2 (147-199)||(7933341-7933393)
chr2 (152-276)||(25622504-25622627)
chr2 (138-229)||(36480511-36480605)
chr2 (159-277)||(11944892-11945010)
chr2 (134-185)||(34898992-34899043)
chr2 (108-214)||(7271812-7271918)
chr2 (175-276)||(24765305-24765406)
chr2 (29-62)||(19009799-19009832)
chr2 (153-226)||(44330642-44330715)
chr2 (153-226)||(44365416-44365489)
chr2 (149-276)||(31513723-31513850)
chr2 (108-276)||(565661-565829)
chr2 (35-82)||(6972644-6972691)
chr2 (147-226)||(18375082-18375161)
chr2 (149-276)||(24389632-24389759)
chr2 (175-274)||(34546303-34546402)
chr2 (35-65)||(4794530-4794560)
chr2 (27-61)||(6723986-6724020)
chr2 (152-278)||(18227090-18227216)
chr2 (150-231)||(24792005-24792086)
chr2 (180-250)||(27133072-27133142)
chr2 (153-199)||(27692743-27692789)
chr2 (210-275)||(30869632-30869695)
chr2 (147-225)||(31452353-31452431)
chr2 (106-252)||(42924384-42924529)
chr2 (29-62)||(314389-314422)
chr2 (132-205)||(2517236-2517309)
chr2 (132-246)||(7270298-7270413)
chr2 (156-277)||(12848488-12848608)
chr2 (180-225)||(13811060-13811105)
chr2 (35-64)||(17154374-17154403)
chr2 (180-225)||(18223135-18223180)
chr2 (149-226)||(18734372-18734449)
chr2 (29-62)||(33602352-33602385)
chr2 (161-250)||(37617410-37617499)
chr2 (191-276)||(45076179-45076263)
chr2 (175-270)||(3074056-3074152)
chr2 (162-234)||(4860156-4860228)
chr2 (147-227)||(6220810-6220890)
chr2 (146-246)||(9049156-9049256)
chr2 (174-254)||(10204149-10204229)
chr2 (134-221)||(27948004-27948092)
chr2 (228-276)||(36480370-36480418)
[»] chr5 (48 HSPs)
chr5 (131-277)||(24041014-24041159)
chr5 (153-250)||(967098-967195)
chr5 (131-276)||(25437865-25438011)
chr5 (135-276)||(41583513-41583654)
chr5 (147-276)||(7719174-7719304)
chr5 (147-276)||(30501146-30501276)
chr5 (147-276)||(30541489-30541619)
chr5 (174-276)||(34032124-34032226)
chr5 (147-276)||(16667298-16667428)
chr5 (163-252)||(8208173-8208262)
chr5 (139-271)||(16161394-16161529)
chr5 (175-276)||(23023603-23023704)
chr5 (154-281)||(31672376-31672504)
chr5 (147-278)||(10051698-10051829)
chr5 (177-252)||(10359084-10359159)
chr5 (159-273)||(2918616-2918730)
chr5 (147-281)||(8247032-8247166)
chr5 (149-226)||(14475009-14475086)
chr5 (175-276)||(33590025-33590125)
chr5 (180-252)||(42265430-42265502)
chr5 (147-226)||(591231-591310)
chr5 (151-214)||(18988785-18988848)
chr5 (180-278)||(32017458-32017555)
chr5 (210-251)||(4695067-4695108)
chr5 (159-248)||(14309106-14309195)
chr5 (106-255)||(27016662-27016809)
chr5 (175-278)||(779054-779156)
chr5 (177-225)||(3758221-3758269)
chr5 (161-277)||(15720036-15720152)
chr5 (149-225)||(27833299-27833375)
chr5 (147-225)||(9276586-9276665)
chr5 (229-276)||(10410420-10410467)
chr5 (187-273)||(27310260-27310347)
chr5 (147-226)||(40872260-40872339)
chr5 (147-253)||(41520655-41520764)
chr5 (159-253)||(11010238-11010331)
chr5 (183-281)||(15699964-15700061)
chr5 (132-276)||(248453-248598)
chr5 (238-275)||(9330409-9330446)
chr5 (29-62)||(10044623-10044656)
chr5 (188-276)||(17098234-17098322)
chr5 (29-62)||(20364521-20364554)
chr5 (29-62)||(24534556-24534589)
chr5 (153-214)||(31889648-31889709)
chr5 (241-281)||(3263712-3263752)
chr5 (36-82)||(35585721-35585764)
chr5 (35-63)||(39061074-39061102)
chr5 (147-199)||(42877291-42877343)
[»] chr6 (25 HSPs)
chr6 (133-276)||(6586410-6586552)
chr6 (132-278)||(25028690-25028835)
chr6 (167-255)||(1840974-1841062)
chr6 (163-276)||(3766250-3766360)
chr6 (209-276)||(4810596-4810663)
chr6 (154-257)||(12132516-12132619)
chr6 (108-277)||(31702708-31702875)
chr6 (147-276)||(29407973-29408102)
chr6 (174-276)||(30509286-30509388)
chr6 (160-276)||(35229262-35229378)
chr6 (155-278)||(7465446-7465568)
chr6 (164-275)||(34231979-34232090)
chr6 (210-276)||(13445801-13445867)
chr6 (147-276)||(2692437-2692565)
chr6 (153-226)||(22020534-22020607)
chr6 (153-226)||(22055031-22055104)
chr6 (183-275)||(387479-387570)
chr6 (130-222)||(15588679-15588771)
chr6 (184-276)||(34185070-34185162)
chr6 (145-227)||(10345999-10346081)
chr6 (33-62)||(2310408-2310437)
chr6 (33-62)||(15081381-15081410)
chr6 (37-96)||(25398884-25398940)
chr6 (108-197)||(2864925-2865016)
chr6 (159-227)||(30396267-30396334)
[»] chr8 (71 HSPs)
chr8 (132-276)||(31264967-31265111)
chr8 (135-273)||(39691109-39691247)
chr8 (150-278)||(37564342-37564470)
chr8 (132-278)||(25279897-25280042)
chr8 (108-280)||(12002233-12002405)
chr8 (130-251)||(1502660-1502782)
chr8 (147-275)||(1876489-1876617)
chr8 (133-265)||(41105991-41106123)
chr8 (138-275)||(29487057-29487195)
chr8 (175-276)||(20279590-20279691)
chr8 (175-276)||(21066217-21066318)
chr8 (159-276)||(28207594-28207711)
chr8 (135-277)||(12639899-12640040)
chr8 (187-252)||(15352117-15352182)
chr8 (175-278)||(25382590-25382694)
chr8 (156-276)||(12229963-12230078)
chr8 (187-250)||(42022640-42022703)
chr8 (154-277)||(42760161-42760283)
chr8 (147-276)||(42636372-42636502)
chr8 (147-252)||(34336480-34336585)
chr8 (132-277)||(41385234-41385379)
chr8 (108-275)||(14016835-14017002)
chr8 (138-276)||(11533202-11533340)
chr8 (210-276)||(24869384-24869450)
chr8 (149-251)||(25163031-25163133)
chr8 (147-276)||(27801232-27801362)
chr8 (184-278)||(28460036-28460130)
chr8 (147-276)||(31844224-31844353)
chr8 (146-251)||(6073225-6073330)
chr8 (161-250)||(33013041-33013130)
chr8 (147-276)||(44254134-44254263)
chr8 (146-250)||(2376734-2376838)
chr8 (147-226)||(15271038-15271117)
chr8 (238-281)||(37426384-37426427)
chr8 (161-255)||(37813423-37813518)
chr8 (164-277)||(167868-167979)
chr8 (175-225)||(37167042-37167091)
chr8 (175-276)||(39093054-39093156)
chr8 (132-182)||(39851995-39852045)
chr8 (147-273)||(44042510-44042636)
chr8 (182-279)||(9460425-9460522)
chr8 (132-273)||(24733145-24733286)
chr8 (229-281)||(1773891-1773943)
chr8 (184-276)||(12782747-12782839)
chr8 (182-286)||(16723237-16723341)
chr8 (180-276)||(30534988-30535084)
chr8 (163-246)||(1369882-1369965)
chr8 (168-251)||(4384163-4384246)
chr8 (151-250)||(12787844-12787943)
chr8 (161-252)||(33949571-33949662)
chr8 (147-225)||(35901952-35902031)
chr8 (182-281)||(42801044-42801142)
chr8 (175-273)||(13028103-13028200)
chr8 (147-225)||(24695768-24695846)
chr8 (175-269)||(27734375-27734469)
chr8 (174-276)||(36348523-36348625)
chr8 (29-99)||(38908780-38908847)
chr8 (209-275)||(39644203-39644269)
chr8 (159-236)||(44225491-44225566)
chr8 (203-276)||(11077889-11077962)
chr8 (145-226)||(11727905-11727985)
chr8 (147-236)||(24457837-24457926)
chr8 (35-99)||(8418390-8418452)
chr8 (238-278)||(9124093-9124133)
chr8 (148-188)||(11078118-11078158)
chr8 (179-227)||(11334071-11334119)
chr8 (160-276)||(18808786-18808902)
chr8 (195-235)||(32228249-32228289)
chr8 (147-199)||(36907847-36907899)
chr8 (144-200)||(42880880-42880936)
chr8 (150-190)||(44960519-44960559)
[»] chr7 (58 HSPs)
chr7 (155-276)||(35599817-35599938)
chr7 (143-273)||(3683397-3683525)
chr7 (142-276)||(34681663-34681796)
chr7 (110-273)||(18926301-18926462)
chr7 (130-273)||(33922728-33922872)
chr7 (130-276)||(36973306-36973454)
chr7 (187-276)||(27338232-27338321)
chr7 (138-245)||(19619993-19620100)
chr7 (146-276)||(34299749-34299879)
chr7 (134-254)||(35875077-35875197)
chr7 (150-274)||(46726109-46726232)
chr7 (159-273)||(43996326-43996441)
chr7 (148-276)||(28770447-28770576)
chr7 (106-279)||(31902716-31902887)
chr7 (166-276)||(27123244-27123354)
chr7 (129-251)||(33887842-33887963)
chr7 (161-278)||(9097716-9097832)
chr7 (146-246)||(24299137-24299237)
chr7 (175-274)||(35567088-35567185)
chr7 (175-276)||(17157804-17157906)
chr7 (135-273)||(22688946-22689082)
chr7 (159-253)||(39321001-39321095)
chr7 (147-276)||(43234760-43234890)
chr7 (191-276)||(25176339-25176424)
chr7 (133-226)||(36061495-36061588)
chr7 (147-278)||(44452048-44452178)
chr7 (147-227)||(26804026-26804106)
chr7 (161-253)||(35731280-35731372)
chr7 (159-226)||(8920722-8920789)
chr7 (137-268)||(40722337-40722468)
chr7 (230-276)||(27766776-27766822)
chr7 (173-251)||(40089272-40089347)
chr7 (147-275)||(43224093-43224221)
chr7 (133-273)||(2347390-2347530)
chr7 (147-276)||(6775201-6775330)
chr7 (148-276)||(10031929-10032057)
chr7 (147-276)||(17883320-17883449)
chr7 (147-276)||(47507580-47507709)
chr7 (146-246)||(8237950-8238050)
chr7 (182-226)||(32490757-32490801)
chr7 (229-276)||(5907795-5907841)
chr7 (147-226)||(26402789-26402868)
chr7 (241-272)||(47754478-47754509)
chr7 (159-225)||(3692898-3692964)
chr7 (159-225)||(27337718-27337784)
chr7 (187-277)||(30626119-30626208)
chr7 (241-271)||(42911164-42911194)
chr7 (35-65)||(46095565-46095595)
chr7 (147-273)||(47405237-47405363)
chr7 (130-199)||(20397459-20397528)
chr7 (239-272)||(27123377-27123410)
chr7 (218-279)||(28324183-28324244)
chr7 (108-226)||(37352377-37352497)
chr7 (132-189)||(40998374-40998431)
chr7 (239-272)||(44537444-44537477)
chr7 (182-226)||(6387995-6388039)
chr7 (35-99)||(22610697-22610759)
chr7 (160-224)||(34398095-34398159)
[»] chr4 (87 HSPs)
chr4 (108-276)||(49532220-49532386)
chr4 (131-251)||(19597141-19597261)
chr4 (132-281)||(2063441-2063589)
chr4 (137-276)||(30978640-30978784)
chr4 (138-275)||(48097923-48098060)
chr4 (150-276)||(24546718-24546843)
chr4 (175-278)||(53737829-53737932)
chr4 (147-273)||(53261531-53261657)
chr4 (108-224)||(1696156-1696272)
chr4 (173-276)||(23016255-23016358)
chr4 (147-276)||(8297841-8297971)
chr4 (133-275)||(41956423-41956565)
chr4 (106-235)||(45743326-45743454)
chr4 (163-276)||(45900172-45900285)
chr4 (108-276)||(51834884-51835053)
chr4 (143-276)||(52650693-52650826)
chr4 (132-275)||(41462020-41462164)
chr4 (177-275)||(39274933-39275030)
chr4 (161-276)||(50086429-50086543)
chr4 (106-250)||(47995702-47995847)
chr4 (188-280)||(24369374-24369465)
chr4 (137-248)||(9044232-9044343)
chr4 (150-276)||(41370178-41370304)
chr4 (159-233)||(52014584-52014658)
chr4 (147-251)||(7852550-7852655)
chr4 (231-276)||(49795115-49795160)
chr4 (182-250)||(2818355-2818423)
chr4 (150-276)||(13800706-13800830)
chr4 (165-273)||(39727579-39727686)
chr4 (147-281)||(28695731-28695865)
chr4 (164-227)||(31429296-31429359)
chr4 (147-281)||(40480177-40480311)
chr4 (147-226)||(46088523-46088602)
chr4 (147-197)||(25115270-25115320)
chr4 (175-276)||(31072505-31072606)
chr4 (147-276)||(31690353-31690482)
chr4 (151-204)||(19652675-19652728)
chr4 (132-233)||(38949051-38949152)
chr4 (159-276)||(49400583-49400699)
chr4 (154-226)||(7627979-7628051)
chr4 (210-278)||(21240637-21240705)
chr4 (150-198)||(31415090-31415138)
chr4 (209-277)||(31655472-31655540)
chr4 (238-278)||(32323812-32323852)
chr4 (31-82)||(38160256-38160305)
chr4 (150-222)||(48315948-48316020)
chr4 (159-199)||(54543617-54543657)
chr4 (210-273)||(54552816-54552879)
chr4 (147-226)||(5047224-5047303)
chr4 (147-197)||(8261157-8261208)
chr4 (147-197)||(8274574-8274625)
chr4 (132-227)||(14603735-14603830)
chr4 (159-214)||(18089650-18089705)
chr4 (147-226)||(25751708-25751787)
chr4 (147-226)||(30161354-30161433)
chr4 (174-276)||(32055374-32055476)
chr4 (147-214)||(36721593-36721660)
chr4 (179-226)||(39279212-39279259)
chr4 (150-281)||(44646535-44646666)
chr4 (164-273)||(50341891-50341998)
chr4 (154-248)||(54974733-54974826)
chr4 (131-227)||(11260576-11260673)
chr4 (175-236)||(12658255-12658316)
chr4 (33-99)||(17237001-17237062)
chr4 (147-275)||(21687592-21687720)
chr4 (29-62)||(22020631-22020664)
chr4 (147-196)||(24753978-24754027)
chr4 (146-195)||(32104297-32104346)
chr4 (29-62)||(37316042-37316075)
chr4 (33-62)||(41436439-41436468)
chr4 (153-198)||(42901983-42902028)
chr4 (132-217)||(42956963-42957048)
chr4 (239-272)||(45900119-45900152)
chr4 (147-276)||(46521474-46521603)
chr4 (203-276)||(47937834-47937906)
chr4 (35-82)||(49218886-49218930)
chr4 (239-272)||(51291188-51291221)
chr4 (180-224)||(5091882-5091926)
chr4 (184-276)||(8607651-8607743)
chr4 (175-270)||(17970786-17970882)
chr4 (184-276)||(21241098-21241189)
chr4 (35-82)||(28330752-28330797)
chr4 (147-226)||(33266826-33266906)
chr4 (240-276)||(38945120-38945156)
chr4 (184-272)||(49951734-49951822)
chr4 (108-276)||(51291056-51291224)
chr4 (35-82)||(55360452-55360497)
[»] chr1 (77 HSPs)
chr1 (128-248)||(5423734-5423854)
chr1 (140-254)||(1048670-1048783)
chr1 (130-275)||(26857181-26857326)
chr1 (147-273)||(48947177-48947303)
chr1 (143-276)||(3047837-3047970)
chr1 (132-270)||(5250893-5251031)
chr1 (106-235)||(44442261-44442388)
chr1 (108-250)||(46592437-46592579)
chr1 (159-281)||(39150547-39150669)
chr1 (138-276)||(16113889-16114029)
chr1 (187-276)||(34861259-34861348)
chr1 (192-276)||(39912262-39912346)
chr1 (146-281)||(40053258-40053393)
chr1 (108-276)||(2864113-2864280)
chr1 (172-244)||(1600951-1601023)
chr1 (163-255)||(6983013-6983105)
chr1 (174-276)||(4521042-4521142)
chr1 (160-278)||(42787730-42787848)
chr1 (175-276)||(39156231-39156332)
chr1 (147-275)||(33791746-33791874)
chr1 (155-275)||(39973863-39973983)
chr1 (161-276)||(33744156-33744271)
chr1 (147-268)||(8365481-8365603)
chr1 (155-277)||(17112672-17112797)
chr1 (185-275)||(35259091-35259181)
chr1 (147-276)||(43492135-43492265)
chr1 (132-280)||(32572762-32572910)
chr1 (130-215)||(40203068-40203153)
chr1 (147-276)||(40377012-40377141)
chr1 (130-226)||(14758579-14758675)
chr1 (180-276)||(34445639-34445735)
chr1 (149-233)||(41649899-41649983)
chr1 (27-62)||(14358127-14358162)
chr1 (159-226)||(45359266-45359333)
chr1 (108-278)||(45640515-45640685)
chr1 (146-235)||(1656447-1656537)
chr1 (210-276)||(31807850-31807916)
chr1 (147-225)||(32562360-32562438)
chr1 (210-276)||(37976799-37976864)
chr1 (147-276)||(45925462-45925592)
chr1 (147-276)||(48022359-48022489)
chr1 (29-62)||(2886125-2886158)
chr1 (161-278)||(4851266-4851382)
chr1 (151-276)||(34582624-34582749)
chr1 (161-250)||(38748742-38748831)
chr1 (175-276)||(39914640-39914741)
chr1 (154-214)||(7750463-7750523)
chr1 (168-276)||(34232735-34232843)
chr1 (238-278)||(37705845-37705885)
chr1 (240-276)||(40570659-40570695)
chr1 (145-235)||(41019512-41019601)
chr1 (35-82)||(15290450-15290496)
chr1 (147-226)||(25670778-25670857)
chr1 (210-273)||(42573839-42573902)
chr1 (192-235)||(43683288-43683331)
chr1 (159-214)||(52757431-52757486)
chr1 (146-276)||(48892-49022)
chr1 (173-255)||(4039635-4039717)
chr1 (173-251)||(4617919-4617997)
chr1 (231-273)||(4771995-4772037)
chr1 (238-276)||(18114532-18114570)
chr1 (162-276)||(31042971-31043085)
chr1 (147-196)||(43397021-43397071)
chr1 (108-190)||(46803571-46803652)
chr1 (175-216)||(22177283-22177324)
chr1 (29-62)||(27932960-27932993)
chr1 (147-220)||(28188648-28188720)
chr1 (187-276)||(35543450-35543539)
chr1 (147-276)||(45584509-45584638)
chr1 (151-236)||(46895942-46896027)
chr1 (159-199)||(18038940-18038980)
chr1 (180-272)||(27542834-27542926)
chr1 (129-217)||(34596109-34596197)
chr1 (174-254)||(36321659-36321739)
chr1 (147-199)||(40286905-40286957)
chr1 (159-251)||(47187840-47187932)
chr1 (147-215)||(50222614-50222682)
[»] chr3 (49 HSPs)
chr3 (133-276)||(54290770-54290913)
chr3 (130-281)||(46547770-46547923)
chr3 (150-276)||(43803940-43804065)
chr3 (145-235)||(51039766-51039856)
chr3 (157-251)||(53040464-53040558)
chr3 (159-250)||(11692729-11692820)
chr3 (154-278)||(4305156-4305280)
chr3 (149-273)||(48551013-48551137)
chr3 (132-226)||(30299300-30299394)
chr3 (155-275)||(24313522-24313643)
chr3 (144-276)||(40690162-40690290)
chr3 (147-276)||(3026991-3027121)
chr3 (150-270)||(45529129-45529249)
chr3 (147-278)||(48180177-48180309)
chr3 (159-276)||(31625359-31625469)
chr3 (146-276)||(25317775-25317905)
chr3 (174-276)||(37708407-37708509)
chr3 (236-278)||(52308984-52309026)
chr3 (146-246)||(12140145-12140246)
chr3 (159-276)||(42846024-42846143)
chr3 (151-226)||(53433197-53433272)
chr3 (154-255)||(1511325-1511427)
chr3 (147-281)||(11465632-11465766)
chr3 (210-276)||(29611990-29612056)
chr3 (146-276)||(45757899-45758029)
chr3 (147-276)||(7278172-7278301)
chr3 (132-193)||(21813148-21813209)
chr3 (147-253)||(26900029-26900138)
chr3 (186-281)||(49003113-49003204)
chr3 (152-273)||(54911174-54911295)
chr3 (177-234)||(20106551-20106610)
chr3 (150-273)||(28874465-28874588)
chr3 (150-280)||(32071082-32071210)
chr3 (147-199)||(32606389-32606441)
chr3 (150-226)||(53641684-53641760)
chr3 (159-227)||(55110046-55110114)
chr3 (175-266)||(13804883-13804974)
chr3 (182-273)||(39400319-39400410)
chr3 (174-225)||(40546348-40546399)
chr3 (159-269)||(2831524-2831634)
chr3 (138-248)||(16992400-16992510)
chr3 (29-62)||(2868528-2868561)
chr3 (29-62)||(8498209-8498242)
chr3 (183-251)||(4824656-4824724)
chr3 (154-226)||(19898116-19898188)
chr3 (148-276)||(38457225-38457351)
chr3 (159-270)||(41571586-41571698)
chr3 (212-276)||(50604023-50604087)
chr3 (160-255)||(53038269-53038365)
[»] scaffold0011 (1 HSPs)
scaffold0011 (131-248)||(219188-219308)
[»] scaffold0633 (1 HSPs)
scaffold0633 (149-233)||(5013-5097)
[»] scaffold0246 (1 HSPs)
scaffold0246 (147-281)||(18116-18250)
[»] scaffold1444 (1 HSPs)
scaffold1444 (157-222)||(1721-1786)
[»] scaffold0005 (1 HSPs)
scaffold0005 (132-227)||(213548-213643)
[»] scaffold0018 (1 HSPs)
scaffold0018 (180-226)||(48799-48845)
[»] scaffold0010 (1 HSPs)
scaffold0010 (152-254)||(26693-26795)
[»] scaffold0321 (1 HSPs)
scaffold0321 (34-62)||(9669-9697)
[»] scaffold0268 (1 HSPs)
scaffold0268 (130-222)||(20238-20330)


Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 24 - 292
Target Start/End: Complemental strand, 13538618 - 13538349
Alignment:
Q  24 atgaatgatcaatttcacttttcaatacaatattaattaattatcttttttcaattatacatcttaattaatactataattcgaaaatgttaactaatgt 123  Q
    |||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||     
T  13538618 atgaatgatcaatttcactttttaatataatattaattaactatcttttttcaattatacatcttaattaatactataattcagaaatgttaactagtgc 13538519  T
Q  124 cccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataa 223  Q
    || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13538518 cctggggacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaattatttgaattttttaaagaataa 13538419  T
Q  224 ttttctaatttagtatgcttaaagagtgccc-caggggcactcgttaacaagactcatactaatttcatc 292  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||| |||||||||    
T  13538418 ttttctaatttagtatgcttaaagagtgccctcgggggcactcgttaacaagacccatacaaatttcatc 13538349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 281
Target Start/End: Complemental strand, 41544092 - 41543942
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaatt-ttttaaagaataattttcta 230  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||    
T  41544092 cactctttaagggtcttaaataataattttttatgaaaaattatgtattcattgcattggaaattgaactatttgaatttttttaaagaataatttccta 41543993  T
Q  231 atttagtatgcttaaagagtgccccaggggcactcgttaacaagactcata 281  Q
    ||||| |||||||||||| |||| | || | ||||||||||||||| ||||    
T  41543992 atttaatatgcttaaagaatgcctcgggagtactcgttaacaagacccata 41543942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 276
Target Start/End: Complemental strand, 32859872 - 32859755
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagg 258  Q
    |||||||||||| || |||||| ||| |||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||| |||||||||||||  ||    
T  32859872 tttttatgaaaacttgtgtatttaatacattggaaattgaactgtttgacttttttaaagaataacttcctaatttagcatgtttaaagagtgccctggg 32859773  T
Q  259 ggcactcgttaacaagac 276  Q
    ||||||||||||||||||    
T  32859772 ggcactcgttaacaagac 32859755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 99 - 288
Target Start/End: Complemental strand, 33455115 - 33454926
Alignment:
Q  99 ataattcgaaaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattga 198  Q
    |||||| | |||||||||||| ||  || ||||||||  |||| || |||||||||||||||||||||||||||| |||| |||||| |||| |||||||    
T  33455115 ataattgggaaatgttaactagtgcacccgagacactggttaaaggacttaaatagtaactttttatgaaaagttgtgtaatcaatgtattgtaaattga 33455016  T
Q  199 actatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactcatactaattt 288  Q
    |   |||||  ||||||||||||| |||  |||||||| ||||||||||||| | || | |||||  ||||||| ||| |||| ||||||    
T  33455015 aaactttgacatttttaaagaatagtttcttaatttagcatgcttaaagagtactccggaggcaccggttaacacgacccataataattt 33454926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 276
Target Start/End: Complemental strand, 18684478 - 18684330
Alignment:
Q  130 gacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttct 229  Q
    ||||||||||||| | ||  |||| |||||||||||||||| || |||||| ||| |||||||||||||| | | ||| ||||||||||||||| || ||    
T  18684478 gacactctttaagagcctagaataataactttttatgaaaatttgtgtatttaatacattggaaattgaattgtatgacttttttaaagaataacttcct 18684379  T
Q  230 aatttagtatgctt--aaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||| ||||||  |||||||| |||  | |||||||||||||||||    
T  18684378 aatttagcatgctttaaaagagtgtcccgagagcactcgttaacaagac 18684330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 2825991 - 2826092
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaag 274  Q
    |||| |||||||||||||||| ||| ||||| | ||||||||| ||||||||  || ||||||||||||||||||| || ||||| ||||||||||||||    
T  2825991 tgtaatcaatgcattggaaatcgaaatattttacttttttaaaaaataatttcttattttagtatgcttaaagagtaccacagggacactcgttaacaag 2826090  T
Q  275 ac 276  Q
    ||    
T  2826091 ac 2826092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 14663171 - 14663291
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagtta-tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttcta 230  Q
    |||||||||||||||||||||| ||| ||||||  |||| ||  || ||| |||| ||||||||||||||||||||| || |||||||||||||||| ||    
T  14663171 cactctttaagggtcttaaataataattttttaaaaaaaatttgtgcatttaatgtattggaaattgaactatttgacttatttaaagaataatttttta 14663270  T
Q  231 atttagtatgcttaaagagtg 251  Q
    |||||  ||||||||| ||||    
T  14663271 atttaaaatgcttaaaaagtg 14663291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 38292489 - 38292364
Alignment:
Q  126 cggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaatttt-ttaaagaataat 224  Q
    |||||| |||||||| ||||| |||||   || ||||||||||||||| |||||| |||||||||  ||||||||||||| | |||| | ||||||||||    
T  38292489 cggagaaactctttatgggtcataaatgaaaattttttatgaaaagttgtgtatttaatgcattgataattgaactatttcacttttctaaaagaataat 38292390  T
Q  225 tttctaatttagtatgcttaaagagt 250  Q
    || ||||||||  |||||||||||||    
T  38292389 ttcctaatttaaaatgcttaaagagt 38292364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 5961970 - 5962101
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttga-attttttaaagaataattttc-taatttagtatgctta 244  Q
    ||||||||||||| ||| |||||| ||||||| |||||||||||||||||||| ||||| |  |||||||  ||||| ||||| |  ||||| |||||||    
T  5961970 ttaaatagtaactgtttttgaaaatttatgtaatcaatgcattggaaattgaaatatttaattttttttatggaatatttttcttcttttagaatgctta 5962069  T
Q  245 aagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||| | | | ||||||||||||||||||    
T  5962070 aagagtgtctcggaggcactcgttaacaagac 5962101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 277
Target Start/End: Original strand, 6761744 - 6761863
Alignment:
Q  158 ctttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccag 257  Q
    |||||| |||||| ||||||| |||||||||||||||||||| ||||||| ||||||| ||||| ||||  |  ||| | |||||||||||||||| | |    
T  6761744 ctttttttgaaaatttatgtaatcaatgcattggaaattgaaatatttgacttttttatagaatgatttattcttttggaatgcttaaagagtgcctcgg 6761843  T
Q  258 gggcactcgttaacaagact 277  Q
      ||||| ||||||||||||    
T  6761844 aagcacttgttaacaagact 6761863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 252
Target Start/End: Complemental strand, 8964477 - 8964386
Alignment:
Q  161 tttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgc 252  Q
    |||||||||| || |||| |||||||||||||||||||| ||||| | |||||||||||||||||   |||||||| ||||||||| |||||    
T  8964477 tttatgaaaatttgtgtaatcaatgcattggaaattgaaatattttacttttttaaagaataattacttaatttagaatgcttaaacagtgc 8964386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 276
Target Start/End: Original strand, 1334903 - 1335020
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagg 258  Q
    |||| ||||||| || | |||| |||||||||||||||| | || |||| ||||||||||||||||| |  ||||| | |||||||||||||||||| |     
T  1334903 ttttaatgaaaaattgtatattgaatgcattggaaattgtaatagttgatttttttaaagaataattattaaatttgggatgcttaaagagtgccccgga 1335002  T
Q  259 ggcactcgttaacaagac 276  Q
    |  |||||||||||||||    
T  1335003 gatactcgttaacaagac 1335020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 3882687 - 3882586
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaag 274  Q
    |||| ||||||||||| |||  ||| |||||||  ||||||||||||||||   || ||||| ||||||||||||||||||  |||||||||||||||||    
T  3882687 tgtaatcaatgcattgaaaaccgaaatatttgacctttttaaagaataattgcttattttagaatgcttaaagagtgccccgagggcactcgttaacaag 3882588  T
Q  275 ac 276  Q
    ||    
T  3882587 ac 3882586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 44195600 - 44195499
Alignment:
Q  153 agtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgc 252  Q
    ||||||||||||| ||||  | |||||| ||||||||| |||||||| ||||| | |||| |||||||||||||  |||||||  |||||||||||||||    
T  44195600 agtaactttttataaaaacatgtgtatttaatgcattgtaaattgaattatttaacttttgtaaagaataatttcttaatttaaaatgcttaaagagtgc 44195501  T
Q  253 cc 254  Q
    ||    
T  44195500 cc 44195499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 40347956 - 40348055
Alignment:
Q  149 aaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaaga 248  Q
    ||||||||| |||||||||||| || |||||| ||| ||||  |||||||||| ||||| ||||||||||||||| || || || ||| |||||||||||    
T  40347956 aaatagtaattttttatgaaaatttgtgtatttaatacattaaaaattgaactgtttgacttttttaaagaataacttcctgatctagcatgcttaaaga 40348055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 273
Target Start/End: Original strand, 6334671 - 6334805
Alignment:
Q  139 taagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagta 238  Q
    ||||||| ||||||  ||||||||||  |||  |||| || ||||||||||||||||||||   |||||  |||||||| ||||||||| |||||||| |    
T  6334671 taagggttttaaatgataactttttacaaaagtttatataatcaatgcattggaaattgaaaactttgacatttttaaaaaataattttttaatttagca 6334770  T
Q  239 tgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    || ||||||||||  ||  || |||||||||||||    
T  6334771 tgtttaaagagtgttccgaggacactcgttaacaa 6334805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 20065010 - 20064881
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttcta-atttagtatgcttaa 245  Q
    |||||||| ||  ||||||||||| || |||||| ||| ||||| |||||| | || |||| ||||| |||||||||||  ||| |||||| || |||||    
T  20065010 ttaaatagaaaggttttatgaaaaattgtgtatttaatacattgaaaattgtaatagttgactttttaaaagaataatta-ctatatttaggatccttaa 20064912  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||| || ||||||||||||||||||    
T  20064911 agagtgccctagaggcactcgttaacaagac 20064881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 20128401 - 20128300
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaag 274  Q
    |||| |||||||||||||| ||| |  |||||| ||||||||||||||| ||   ||||||| || ||||||||||| ||| |||||||||||| |||||    
T  20128401 tgtaatcaatgcattggaatttgtaacatttgacttttttaaagaataaattataaatttaggatccttaaagagtgtcccgggggcactcgtttacaag 20128302  T
Q  275 ac 276  Q
    ||    
T  20128301 ac 20128300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 236
Target Start/End: Complemental strand, 35317939 - 35317831
Alignment:
Q  128 gagacactctttaagggtcttaaatagtaacttttt-atgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||||||| |||| || || ||||||||| ||||||| || |||||| ||||||| | ||| |||||| ||||| |||||| |||||||| ||    
T  35317939 gagacactctttaagagtctaaagtaataacttttttatgaaaatttgtgtatttaatgcat-gcaaaatgaactgtttgacttttttcaagaataactt 35317841  T
Q  227 tctaatttag 236  Q
    ||||||||||    
T  35317840 tctaatttag 35317831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 15120065 - 15120181
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttc-taatttagtatgcttaaagagtgccccag 257  Q
    ||||||| |||| | ||| ||| ||||||||||||||||||||| |||| ||||||||| ||  |||||| |||||  | || |||||||||||||| |     
T  15120065 tttttataaaaattgatgaatttaatgcattggaaattgaactaattgatttttttaaataaacattttcttaattaggaatccttaaagagtgccctaa 15120164  T
Q  258 gggcactcgttaacaag 274  Q
    |||||||||||| ||||    
T  15120165 gggcactcgttagcaag 15120181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 9153494 - 9153581
Alignment:
Q  160 ttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaag 247  Q
    |||||| |||| || ||||||||||||||||||||||||| | ||||  ||||||||||||||||||  |||||| | || |||||||    
T  9153494 ttttataaaaatttgtgtattcaatgcattggaaattgaagtgtttgccttttttaaagaataatttcttaatttggaatccttaaag 9153581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 278
Target Start/End: Original strand, 33634805 - 33634936
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||||||||||||||| ||||||| || | ||| | ||||||||||||||   ||| |  |||| || |||||||| | |||||||  || ||||||    
T  33634805 ttaaatagtaactttttataaaaagttgtgcaatcagtacattggaaattgaaaactttcatattttaaacgaataattatttaatttaacatccttaaa 33634904  T
Q  247 gagtgccccaggggcactcgttaacaagactc 278  Q
    ||||| | || | |||||||||||||||||||    
T  33634905 gagtgtctcaagtgcactcgttaacaagactc 33634936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 276
Target Start/End: Complemental strand, 16717747 - 16717581
Alignment:
Q  107 aaaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttg 206  Q
    ||||||||||| | |||||| | ||||||||||||||  | ||| |||||| | ||||||||||   || || ||||||| ||||||||  || |||||     
T  16717747 aaaatgttaacgagtgtccccg-gacactctttaaggaacataagtagtaagtatttatgaaaatgcatataatcaatgctttggaaatcaaaatattta 16717649  T
Q  207 aattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    | |||||||||||||||||   || ||||| ||||||||||||||   | || |||||||||||||||||    
T  16717648 atttttttaaagaataattacttattttagaatgcttaaagagtg--tctggagcactcgttaacaagac 16717581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 19890208 - 19890322
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagg 258  Q
    |||| |||||||||| |||||| |||||||||||||||| | || |||| ||||| |||||||||||    ||||||| ||||||||| ||| |||| |     
T  19890208 ttttaatgaaaagttgtgtattaaatgcattggaaattgtaatagttgactttttaaaagaataattactaaatttaggatgcttaaatagtaccccgga 19890307  T
Q  259 ggcactcgttaacaa 273  Q
      |||||||||||||    
T  19890308 aacactcgttaacaa 19890322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 31017327 - 31017393
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    |||| |||||||||| |||||| ||||||||| ||||| || ||||||| |||||||||||||||||    
T  31017327 ttttaatgaaaagttgtgtattaaatgcattgaaaattaaaatatttgacttttttaaagaataatt 31017393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 33962935 - 33963029
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||||   ||||||| ||| |||||||||||| || || ||||||||||||| |||||||| | ||  | ||||||||||||||||||    
T  33962935 cactctttaaggactttaaataataaatttttatgaaaaattgtgcattcaatgcattgaaaattgaagtgttaaacttttttaaagaataattt 33963029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 15816795 - 15816840
Alignment:
Q  231 atttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  15816795 atttagtatgcttaaagagtgccctgggggcactcgttaacaagac 15816840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 22440135 - 22440251
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttct-a 230  Q
    |||||||||||   ||| |||||||| ||||||||||||  |||||| ||||||||||| || ||| |  ||||||||||||| |||||| ||||||| |    
T  22440135 cactctttaagtacctttaatagtaagtttttatgaaaatatatgtaatcaatgcattgaaacttgtaacatttgaattttttgaagaat-attttctaa 22440233  T
Q  231 atttagtatgcttaaaga 248  Q
    |||| | |||||||||||    
T  22440234 atttgggatgcttaaaga 22440251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 281
Target Start/End: Original strand, 29685672 - 29685845
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttga 207  Q
    |||||||||||| |||| || || ||||  |||||| ||| ||||| ||||||||||  |||| || |||| ||  ||| ||| |||||||    ||| |    
T  29685672 aaatgttaactagtgtctcgaaggcactagttaaggatctaaaataataactttttacaaaaatttgtgtaatcggtgcgttgaaaattgagaactttta 29685771  T
Q  208 attttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactcata 281  Q
    | |||| |||||||||||   | |||||| ||| ||||||||||| || | |||||||||||||||||||||||    
T  29685772 aattttgaaagaataattactttatttagcatgtttaaagagtgctccggaggcactcgttaacaagactcata 29685845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 2769259 - 2769386
Alignment:
Q  154 gtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttga-attttttaaagaataattttctaatttagtatgcttaaagagtgc 252  Q
    |||||||||| |||||  || |||| |||||||||| ||||||||   |||||| ||||||||  |||||||||     ||| | |||||||||||||||    
T  2769259 gtaactttttttgaaattttttgtaatcaatgcattagaaattgattcatttgacattttttatggaataatttctcctttttgaatgcttaaagagtgc 2769358  T
Q  253 cccaggggcactcgttaacaagactcata 281  Q
    ||| |||||||||||||||||||| ||||    
T  2769359 ccc-ggggcactcgttaacaagacccata 2769386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 7933393 - 7933341
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaa 199  Q
    ||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||    
T  7933393 ttaaatagtaaatttttatgaaaaattatgcattcaatgcatcggaaattgaa 7933341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 276
Target Start/End: Complemental strand, 25622627 - 25622504
Alignment:
Q  152 tagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtg 251  Q
    |||||| | ||||||||||  |||||| | ||||||||| |||||| | |||||||  |||||||| |||||||   |||||||| ||| ||||||||||    
T  25622627 tagtaaatatttatgaaaaaatatgtaattaatgcattgaaaattgtaatatttgatatttttaaa-aataattacttaatttagaatgtttaaagagtg 25622529  T
Q  252 ccccaggggcactcgttaacaagac 276  Q
    |  | || |||||||||||||||||    
T  25622528 catcgggagcactcgttaacaagac 25622504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 36480605 - 36480511
Alignment:
Q  138 ttaagggtcttaaatag---taactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttct 229  Q
    |||||||||||||||||   ||||||||||| ||||  | |||||| ||||||||||||||| ||| |||| | |||||| || |||||||||||    
T  36480605 ttaagggtcttaaataggagtaactttttataaaaacatgtgtatttaatgcattggaaattaaacaatttcactttttttaaaaataattttct 36480511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 277
Target Start/End: Original strand, 11944892 - 11945010
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttga-attttttaaagaataattttctaatttagtatgcttaaagagtgccccag 257  Q
    ||||||||||||||| |||||||||||||||| |||||| | || |||| |||||||||| |||||||    || |||| || ||||||||||| | | |    
T  11944892 tttttatgaaaagttgtgtattcaatgcattgaaaattgtaatagttgacattttttaaa-aataattactaaaattaggatccttaaagagtgtctctg 11944990  T
Q  258 gggcactcgttaacaagact 277  Q
    |  |||||||||||||||||    
T  11944991 gaacactcgttaacaagact 11945010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 34899043 - 34898992
Alignment:
Q  134 ctctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatg 185  Q
    |||||||||||| ||||||||||| |||||||||||| | ||||||||||||    
T  34899043 ctctttaagggttttaaatagtaaatttttatgaaaattcatgtattcaatg 34898992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 7271918 - 7271812
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttga 207  Q
    |||||||||| | |||| | | |||||||| ||||  | ||||||  ||||||||||||||||  |||||| ||||||||||||||||  || |||||||    
T  7271918 aaatgttaacgagtgtcgccgggacactctataagacttttaaatgataactttttatgaaaatatatgtaatcaatgcattggaaataaaaatatttga 7271819  T
Q  208 atttttt 214  Q
     ||||||    
T  7271818 ctttttt 7271812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 24765406 - 24765305
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa-tttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    |||| |||||||||||||| ||| | ||||||| |||||||| ||||| |||||||| ||| | || ||||||||||||   || |||||||||||||||    
T  24765406 tgtaatcaatgcattggaatttgtaatatttgatttttttaaggaata-ttttctaaatttgggatccttaaagagtgctttagaggcactcgttaacaa 24765308  T
Q  274 gac 276  Q
    |||    
T  24765307 gac 24765305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 19009799 - 19009832
Alignment:
Q  29 tgatcaatttcacttttcaatacaatattaatta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  19009799 tgatcaatttcacttttcaatacaatattaatta 19009832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 44330642 - 44330715
Alignment:
Q  153 agtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||| ||||||| |||| ||||| | |||||||||||||||||| | | ||||| ||||||||| ||||||||    
T  44330642 agtaagtttttatcaaaatttatgaaatcaatgcattggaaattggagtttttgacttttttaaataataattt 44330715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 44365416 - 44365489
Alignment:
Q  153 agtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||| ||||||| |||| ||||| | |||||||||||||||||| | | ||||| ||||||||| ||||||||    
T  44365416 agtaagtttttatcaaaatttatgaaatcaatgcattggaaattggagtttttgacttttttaaataataattt 44365489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 276
Target Start/End: Complemental strand, 31513850 - 31513723
Alignment:
Q  149 aaatagtaactttttatgaaaagt-tatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaag 247  Q
    ||||||||||| ||||||||||   | |||| |||||||||||||||| |||  |||| |||||||  || ||||||| | || ||||| | ||||||||    
T  31513850 aaatagtaactatttatgaaaaaaatgtgtaatcaatgcattggaaatcgaaacatttaaatttttataaaaataattct-tattttagaaagcttaaag 31513752  T
Q  248 agtgccccaggggcactcgttaacaagac 276  Q
    |||||||| | | |||||| |||||||||    
T  31513751 agtgccccggagacactcgctaacaagac 31513723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 276
Target Start/End: Original strand, 565661 - 565829
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttga 207  Q
    |||||||||||| || ||||| | ||||  |||||| || |||| |||||||||||||||||  || |||| | | ||||| ||||||||||   ||| |    
T  565661 aaatgttaactagtgccccgggg-cactgattaaggatcataaaaagtaactttttatgaaagtttgtgtaattagtgcataggaaattgaaaactttca 565759  T
Q  208 attttttaaagaataatttt--ctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
      ||||||||||||| ||||   |||||||| |||||||||||||  | | ||| ||||||||||||||||    
T  565760 catttttaaagaatacttttacttaatttagcatgcttaaagagtatctc-gggacactcgttaacaagac 565829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 6972691 - 6972644
Alignment:
Q  35 atttcacttttcaatacaatattaattaattatcttttttcaattata 82  Q
    |||||||||||||||||||||||||||| || | ||| ||||||||||    
T  6972691 atttcacttttcaatacaatattaattacttttttttcttcaattata 6972644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 18375161 - 18375082
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||| ||||| | |||  ||||| | ||||||||||| |||||| | | ||||| ||||||||||||||||||    
T  18375161 ttaaatagtaagtttttgtcaaagtttatgaaatcaatgcattgaaaattggagtttttgacttttttaaagaataattt 18375082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 276
Target Start/End: Original strand, 24389632 - 24389759
Alignment:
Q  149 aaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaaga 248  Q
    |||| ||||||| ||||||||  || |||| |||  |||||||||||||||   |||||  | || |||||||||||   |||||||| |||||||||||    
T  24389632 aaatggtaacttcttatgaaagtttgtgtaatcagcgcattggaaattgaaaactttgacatcttaaaagaataattacttaatttagcatgcttaaaga 24389731  T
Q  249 gtgccccaggggcactcgttaacaagac 276  Q
    |||||||  ||  ||| |||||||||||    
T  24389732 gtgccccgtggatacttgttaacaagac 24389759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 274
Target Start/End: Original strand, 34546303 - 34546402
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaag 274  Q
    |||| |||||||||  ||||| ||| ||||||| ||||||| | | ||||||  | |||| | || || ||||||||| |||||||||||||||||||||    
T  34546303 tgtaatcaatgcatcagaaatcgaagtatttgacttttttataaattaatttcttcatttggaatcctcaaagagtgctccaggggcactcgttaacaag 34546402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 4794530 - 4794560
Alignment:
Q  35 atttcacttttcaatacaatattaattaatt 65  Q
    |||||||||||||||||||||||||||||||    
T  4794530 atttcacttttcaatacaatattaattaatt 4794560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 6724020 - 6723986
Alignment:
Q  27 aatgatcaatttcacttttcaatacaatattaatt 61  Q
    ||||||| |||||||||||||||||||||||||||    
T  6724020 aatgatccatttcacttttcaatacaatattaatt 6723986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 278
Target Start/End: Complemental strand, 18227216 - 18227090
Alignment:
Q  152 tagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtg 251  Q
    |||||| | ||||||||||  ||| || ||||||||||| |||| ||| ||||||| |||| | ||||||||||   || ||||  ||| ||||||||||    
T  18227216 tagtaagtatttatgaaaatgtatttaatcaatgcattgaaaatcgaaatatttgacttttatgaagaataattacttattttataatgtttaaagagtg 18227117  T
Q  252 ccccaggggcactcgttaacaagactc 278  Q
      || | | ||||||||||||||||||    
T  18227116 ttccggagacactcgttaacaagactc 18227090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 24792086 - 24792005
Alignment:
Q  150 aatagtaactttttatgaaaagt-tatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa 231  Q
    |||||||| ||||||| |||| | |||||| |||||||||||||| ||| |  |||||| ||||||||||||| |||||||||    
T  24792086 aatagtaagtttttataaaaattatatgtaatcaatgcattggaatttgtaacatttgacttttttaaagaat-attttctaa 24792005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 27133142 - 27133072
Alignment:
Q  180 tcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagt 250  Q
    |||||||||||||||| ||| | | ||| |||||||||||||||||   || ||||||||| |||||||||    
T  27133142 tcaatgcattggaaatcgaattgtatgacttttttaaagaataattgcttattttagtatgtttaaagagt 27133072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 27692743 - 27692789
Alignment:
Q  153 agtaactttttatgaaaagttatgtattcaatgcattggaaattgaa 199  Q
    ||||||||||||| |||| ||||||| | ||||||||||||||||||    
T  27692743 agtaactttttataaaaatttatgtaataaatgcattggaaattgaa 27692789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 30869632 - 30869695
Alignment:
Q  210 tttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaaga 275  Q
    |||||||||||||| |||  ||||||| |||||||||||||||||  | | |||||||||||||||    
T  30869632 tttttaaagaataaattt--aatttagcatgcttaaagagtgccctggagacactcgttaacaaga 30869695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 31452353 - 31452431
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    ||||||||||| ||||||  ||||||| |||||| ||||||||| |||||| | |  |||| ||||| |||||||||||    
T  31452353 ttaaatagtaagtttttaataaaagttgtgtattgaatgcattgaaaattgtaattgttgactttttaaaagaataatt 31452431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 42924384 - 42924529
Alignment:
Q  106 gaaaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactattt 205  Q
    |||||||||||| | |||| | | |||||| |||||||  | |||||||||| | ||||||||||   ||||| ||||| | ||| |||||||| |||||    
T  42924384 gaaaatgttaacgagtgtctccgggacact-tttaaggtccataaatagtaaatatttatgaaaatgcatgtaatcaatacgttgaaaattgaaatattt 42924482  T
Q  206 gaattttttaaagaataattttctaatttagtatgcttaaagagtgc 252  Q
    || |||||| || |||||||   |  ||||| |||||||||||||||    
T  42924483 gattttttttaaaaataattacttcttttagaatgcttaaagagtgc 42924529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 314389 - 314422
Alignment:
Q  29 tgatcaatttcacttttcaatacaatattaatta 62  Q
    ||||| ||||||||||||||||||||||||||||    
T  314389 tgatccatttcacttttcaatacaatattaatta 314422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 2517236 - 2517309
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactattt 205  Q
    |||||||||||| || |||||||||| | ||||||||||    |||| ||||||||||| |||||||| |||||    
T  2517236 cactctttaaggatcataaatagtaagtatttatgaaaatacgtgtaatcaatgcattgaaaattgaaatattt 2517309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 7270413 - 7270298
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaag--ttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttct 229  Q
    |||| |||||| |||||  || |||||||||||| ||||   |||||  ||||||| |||  |||||||||||||| | ||||||||| ||||||||| |    
T  7270413 cactttttaagagtctttgatggtaactttttataaaaaaaattatgcgttcaatgtattataaattgaactatttaacttttttaaa-aataatttttt 7270315  T
Q  230 aatttagtatgcttaaa 246  Q
    ||||||| ||| |||||    
T  7270314 aatttagaatgtttaaa 7270298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 277
Target Start/End: Original strand, 12848488 - 12848608
Alignment:
Q  156 aactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgcccc 255  Q
    ||||||||||||||  || |||| | | |||| |||||||||||   |||||  || |||||||||| ||   ||||||| |||||||||||||||||||    
T  12848488 aactttttatgaaagtttgtgtaattagtgcaatggaaattgaaaactttgacattattaaagaatagttacttaatttaatatgcttaaagagtgcccc 12848587  T
Q  256 aggggcactcgttaacaagact 277  Q
     ||  |||| ||||||||||||    
T  12848588 -ggaacacttgttaacaagact 12848608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 13811105 - 13811060
Alignment:
Q  180 tcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    ||||||||||||||||| || ||||| | |||||||||||||||||    
T  13811105 tcaatgcattggaaattaaaatattttacttttttaaagaataatt 13811060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 64
Target Start/End: Complemental strand, 17154403 - 17154374
Alignment:
Q  35 atttcacttttcaatacaatattaattaat 64  Q
    ||||||||||||||||||||||||||||||    
T  17154403 atttcacttttcaatacaatattaattaat 17154374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 18223180 - 18223135
Alignment:
Q  180 tcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    |||||||||||||||||||| ||||  | |||||||||||||||||    
T  18223180 tcaatgcattggaaattgaaatattctatttttttaaagaataatt 18223135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 18734449 - 18734372
Alignment:
Q  149 aaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||| |||||||||||| || || |||||||| || |||||||||| | ||  | |||||||| |||||||||    
T  18734449 aaatagtaaatttttatgaaaaattgtgcattcaatgtatcggaaattgaagtgttaaacttttttaaggaataattt 18734372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 33602385 - 33602352
Alignment:
Q  29 tgatcaatttcacttttcaatacaatattaatta 62  Q
    ||||| ||||||||||||||||||||||||||||    
T  33602385 tgatctatttcacttttcaatacaatattaatta 33602352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 37617410 - 37617499
Alignment:
Q  161 tttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagt 250  Q
    ||||||||||  |||| | |||||| |||||||||  || ||||| | ||||||||||||||||| | || ||||  |||||||||||||    
T  37617410 tttatgaaaatgtatgcaatcaatgtattggaaataaaaatatttaatttttttaaagaataattatttattttaaaatgcttaaagagt 37617499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 276
Target Start/End: Original strand, 45076179 - 45076263
Alignment:
Q  191 gaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||| || ||||| | |||||||||||||||||   || ||||||||| |||||||||||| | ||| |||||||||| |||||    
T  45076179 gaaattaaaatatttaacttttttaaagaataattgcttattttagtatgtttaaagagtgcctc-gggacactcgttaataagac 45076263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 3074152 - 3074056
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaa-gaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaa 270  Q
    |||| ||| ||||||||||||||||  | ||  || ||||||| ||||||||   |||||||  |||||||||||||||||| |||| |||||||||    
T  3074152 tgtaatcagtgcattggaaattgaaaaactttgatattttaaatgaataattacttaatttatcatgcttaaagagtgccccgggggtactcgttaa 3074056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 4860228 - 4860156
Alignment:
Q  162 ttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaattt 234  Q
    ||||||||| ||||| |||||||||||| ||||||||| |||||  |||||| |  ||||| ||| |||||||    
T  4860228 ttatgaaaatttatgaattcaatgcattagaaattgaagtatttagatttttaagtgaatattttcctaattt 4860156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 6220890 - 6220810
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatttt 227  Q
    ||||||||||| |||||||||||| |||| ||   |||  ||||||||||||| ||||||| ||| | ||| |||||||||    
T  6220890 ttaaatagtaaatttttatgaaaatttatataactaatatattggaaattgaaatatttgattttctcaaaaaataatttt 6220810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 9049156 - 9049256
Alignment:
Q  146 cttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    |||||||| ||||||||||| |||| || |||| | ||||||||| ||||||||  |||| |  |||| |||||||||||   |||||||  ||||||||    
T  9049156 cttaaataataactttttataaaaatttgtgtaattaatgcattgaaaattgaaaaatttaacattttaaaagaataattacttaatttaacatgcttaa 9049255  T
Q  246 a 246  Q
    |    
T  9049256 a 9049256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 10204229 - 10204149
Alignment:
Q  174 atgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccc 254  Q
    ||||| ||||||||||| |||| |||  ||||||||||||| |||||||||| | || |||   ||| |||||||||||||    
T  10204229 atgtaatcaatgcattgaaaatcgaaacatttgaattttttgaagaataattatttattttgtaatggttaaagagtgccc 10204149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 27948004 - 27948092
Alignment:
Q  134 ctctttaagggtcttaaatagtaactttttatgaaaagttatgt-attcaatgcattggaaattgaactatttgaattttttaaagaat 221  Q
    |||||||||| || ||| |||||| | ||||||||||  | ||| | |||||||||||||||| |||  |||||| |||||||||||||    
T  27948004 ctctttaaggatcataagtagtaagtatttatgaaaatgtgtgttaatcaatgcattggaaatcgaaacatttgacttttttaaagaat 27948092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 36480418 - 36480370
Alignment:
Q  228 ctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||| |||||||||||||| |||  || ||||||||||||||||    
T  36480418 ctaatttagaatgcttaaagagtgtcccgaggacactcgttaacaagac 36480370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 7e-49; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 131 - 277
Target Start/End: Original strand, 24041014 - 24041159
Alignment:
Q  131 acactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttcta 230  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||  ||    
T  24041014 acactttttaagggtcttaaatagtaactttttatgaaaagttatgtatttaatgtattggaaattaaactatttgaattttttaaagaataatttcata 24041113  T
Q  231 atttagtatgcttaaagagtgccccaggggcactcgttaacaagact 277  Q
    ||||  |||||||||||||| |||| || ||||||||||||||||||    
T  24041114 atttgatatgcttaaagagtacccc-ggagcactcgttaacaagact 24041159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 967195 - 967098
Alignment:
Q  153 agtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagt 250  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  967195 agtaacttttcatgaaaattcatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatatcctaatttggtatgcttaaagagt 967098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 276
Target Start/End: Original strand, 25437865 - 25438011
Alignment:
Q  131 acactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaatttt-ttaaagaataattttct 229  Q
    |||||||||||| | ||  ||||||||||||||||||||| || |||||| ||| |||||||||||||||| ||| | |||| ||||||||||| ||  |    
T  25437865 acactctttaagagcctagaatagtaactttttatgaaaacttgtgtatttaatacattggaaattgaactgtttcactttttttaaagaataacttctt 25437964  T
Q  230 aatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  25437965 aatttagcatgcttaaagagtgtcccgggggcactcgttaacaagac 25438011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 41583654 - 41583513
Alignment:
Q  135 tctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaattt 234  Q
    ||||||||  |||| |||||||| ||||||||||||  | ||||||||||||||||||| ||| | ||||| | ||||| || |||||||||   |||||    
T  41583654 tctttaagaatcttcaatagtaaatttttatgaaaatctgtgtattcaatgcattggaatttgtaatatttaactttttgaaggaataatttctaaattt 41583555  T
Q  235 agtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
     | || ||||||||||| ||| ||||||||||||||||||||    
T  41583554 gggatccttaaagagtgacccgggggcactcgttaacaagac 41583513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 7719304 - 7719174
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||| ||| |||||| ||||||||| |||||| |||  ||||||||||| | || |||| ||||| |||||||||||||  ||| | ||||||||||    
T  7719304 ttaaataataagtttttaatgaaaagttgtgtattgaatatattggaaattgtaatagttgattttttaaaagaataatttttaaatatggtatgcttaa 7719205  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    |||||| ||| |||||||||||||| |||||    
T  7719204 agagtgtcccgggggcactcgttaaaaagac 7719174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 30501146 - 30501276
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| |||| | ||||||||| |||||| |||| ||||||||||| | || |||| ||||| |||||||||||    ||||| | ||||||||    
T  30501146 ttaaatagtaagttttaaatgaaaagttgtgtattgaatgtattggaaattgtaataattgactttttaaaagaataattactaaatttgggatgcttaa 30501245  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||  ||||||||||||||||||||    
T  30501246 agagtgccctgggggcactcgttaacaagac 30501276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 30541489 - 30541619
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| |||| | ||||||||| |||||| |||| ||||||||||| | || |||| ||||| |||||||||||    ||||| | ||||||||    
T  30541489 ttaaatagtaagttttaaatgaaaagttgtgtattgaatgtattggaaattgtaataattgactttttaaaagaataattactaaatttgggatgcttaa 30541588  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||  ||||||||||||||||||||    
T  30541589 agagtgccctgggggcactcgttaacaagac 30541619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 34032124 - 34032226
Alignment:
Q  174 atgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    ||||| ||| ||| || ||||||||| ||||| | |||||||||||||||||   || ||||| ||||||||||||||||||| || |||||||||||||    
T  34032124 atgtaatcattgcctttgaaattgaaatatttaacttttttaaagaataattacttattttagaatgcttaaagagtgccccaaggacactcgttaacaa 34032223  T
Q  274 gac 276  Q
    |||    
T  34032224 gac 34032226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 16667298 - 16667428
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| |||||| |||||| || |||||| |||| ||||||||||| | || |||| ||||| ||||||||||| |  |||||   ||||||||    
T  16667298 ttaaatagtaagtttttaatgaaaaattgtgtattgaatgtattggaaattgtaataattgactttttaaaagaataattattaaatttgtgatgcttaa 16667397  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||| | ||||||| |||| |||||    
T  16667398 agagtgccccggaggcactctttaaaaagac 16667428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 8208262 - 8208173
Alignment:
Q  163 tatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgc 252  Q
    |||||||||||||||| | ||||||||  |||||| | || |||| ||||| |||||||||||||| ||||||  |||||||||||||||    
T  8208262 tatgaaaagttatgtaatgaatgcattaaaaattgtaataattgactttttaaaagaataattttcaaatttaaaatgcttaaagagtgc 8208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 16161529 - 16161394
Alignment:
Q  139 taagggtcttaaatagtaacttttt---atgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaattta 235  Q
    ||||||||||||||||||| |||||   || ||||  | |||||| ||| ||||| |||||||| ||||| | |||||| || |||||||| |||||||     
T  16161529 taagggtcttaaatagtaatttttttttataaaaatatgtgtatttaatccattgaaaattgaattatttaactttttttaaaaataatttcctaatttg 16161430  T
Q  236 gtatgcttaaagagtgccccaggggcactcgttaac 271  Q
    | |||||||||||||||||| |   |||||||||||    
T  16161429 gaatgcttaaagagtgccccggaaacactcgttaac 16161394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 23023704 - 23023603
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaag 274  Q
    |||||| ||||||||| ||||||||  | |||| |||||||  | |||||||  | | |||| |||||||||||||||||| ||||||||||||||||||    
T  23023704 tgtatttaatgcattgaaaattgaaacaattgacttttttagtggataatttctttaattagaatgcttaaagagtgccccgggggcactcgttaacaag 23023605  T
Q  275 ac 276  Q
    ||    
T  23023604 ac 23023603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 31672504 - 31672376
Alignment:
Q  154 gtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagta-tgcttaaagagtgc 252  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||  |||||| |||||| | | |  | |||||  ||| | | ||||||||||||||    
T  31672504 gtaactttttttgaaattttttgtaatcaatgcattggaaattgaaacatttgactttttttatggaatagtttctccttttggaatgcttaaagagtgc 31672405  T
Q  253 cccaggggcactcgttaacaagactcata 281  Q
    ||| |||||||||||||||||||| ||||    
T  31672404 cccgggggcactcgttaacaagacccata 31672376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 278
Target Start/End: Complemental strand, 10051829 - 10051698
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    |||||| ||||||| |||||||||||| | || ||||||||| ||||||  || ||||||| ||||||| | ||| ||||  |  ||||  || ||||||    
T  10051829 ttaaatggtaacttattatgaaaagttgtataatcaatgcatcggaaatataaatatttgacttttttataaaattatttcttcttttaaaatccttaaa 10051730  T
Q  247 gagtgccccaggggcactcgttaacaagactc 278  Q
    |||||||  |||| ||||||||||||||||||    
T  10051729 gagtgccttagggacactcgttaacaagactc 10051698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 10359159 - 10359084
Alignment:
Q  177 tattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgc 252  Q
    |||||||||||||| ||||| |||||||| | |||| |||| |||||||||||||||||  ||| |||||||||||    
T  10359159 tattcaatgcattgaaaattaaactatttaagttttataaaaaataattttctaatttaaaatgtttaaagagtgc 10359084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 2918616 - 2918730
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagg 258  Q
    |||| |||||||||| |||||| |||||||||||||||  | || ||||  |||||||| ||||||| |  |||||   ||||||||||||| |||||      
T  2918616 ttttaatgaaaagttgtgtattaaatgcattggaaattataatagttgacatttttaaaaaataattattaaatttgaaatgcttaaagagtaccccaaa 2918715  T
Q  259 ggcactcgttaacaa 273  Q
    |||||||||||||||    
T  2918716 ggcactcgttaacaa 2918730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 281
Target Start/End: Complemental strand, 8247166 - 8247032
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    |||||| ||||||| | |||||||||| | || ||||||||| |||||| ||| ||||||| ||||||| | ||| ||||  |  ||| | || ||||||    
T  8247166 ttaaatggtaacttatcatgaaaagttgtataatcaatgcatcggaaatcgaaatatttgacttttttataaaattatttcttcttttggaatccttaaa 8247067  T
Q  247 gagtgccccaggggcactcgttaacaagactcata 281  Q
    ||||| | | |||||||||||||||||||| ||||    
T  8247066 gagtgtcacgggggcactcgttaacaagacccata 8247032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 14475009 - 14475086
Alignment:
Q  149 aaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||||||| |||||| ||||||| |||| ||||  ||||||||| |||||||  |||||| ||||||||||    
T  14475009 aaatagtaactttttttgaaaatttatgtaatcaaagcatctgaaattgaaatatttgacatttttatagaataattt 14475086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 33590125 - 33590025
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaag 274  Q
    |||||| |||| ||||||||||||||||||| | ||||| ||||||||||||  |||||||| ||  ||||||||  | || ||||||||||||||| ||    
T  33590125 tgtatttaatgtattggaaattgaactatttaattttttaaaagaataatttattaatttagaatatttaaagagcacacc-ggggcactcgttaacgag 33590027  T
Q  275 ac 276  Q
    ||    
T  33590026 ac 33590025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 42265502 - 42265430
Alignment:
Q  180 tcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgc 252  Q
    ||||||||||| |||||||| | ||||| ||||||||||||||||||| | ||| || || ||||||||||||    
T  42265502 tcaatgcattgaaaattgaaatttttgacttttttaaagaataatttttttattaagaatccttaaagagtgc 42265430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 591231 - 591310
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||| ||||| | |||  ||||| | |||||||||||||||||||| | || || ||||||||||||||||||    
T  591231 ttaaatagtaagtttttgtcaaagtttatgaaatcaatgcattggaaattgaagttttcgacttttttaaagaataattt 591310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 18988848 - 18988785
Alignment:
Q  151 atagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaatttttt 214  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||||| || |||| || ||||||    
T  18988848 atagtaaatttttatgaaaacttatgcattcaatgcattggaaatttaagtattagactttttt 18988785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 278
Target Start/End: Original strand, 32017458 - 32017555
Alignment:
Q  180 tcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactc 278  Q
    ||||||||||| |||||||| ||||| | |||||||||||||||||   |  |||  |||| |||||||||||||| |||| |||||||||||| ||||    
T  32017458 tcaatgcattgaaaattgaaatattttacttttttaaagaataattgcttgttttgatatgtttaaagagtgcccc-ggggtactcgttaacaaaactc 32017555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 4695108 - 4695067
Alignment:
Q  210 tttttaaagaataattttctaatttagtatgcttaaagagtg 251  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  4695108 tttttaaagaataattttttaatttagcatgcttaaagagtg 4695067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 14309106 - 14309195
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaaga 248  Q
    |||||||||||| || |||| | ||||||||||||||||||   |||||  |||||||||||||| |   ||||||| ||||||||||||    
T  14309106 tttttatgaaaatttgtgtaattaatgcattggaaattgaaaactttgatatttttaaagaataactacttaatttaatatgcttaaaga 14309195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 255
Target Start/End: Complemental strand, 27016809 - 27016662
Alignment:
Q  106 gaaaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactattt 205  Q
    |||||||||||| | || ||||| | |||||||||||  | |||||   ||||||||| |||||| | ||||| || ||||||||||||||||| | |||    
T  27016809 gaaaatgttaacgagtgccccgg-gccactctttaagacttttaaaagataacttttt-tgaaaattaatgtaatcgatgcattggaaattgaaattttt 27016712  T
Q  206 gaattttttaaagaataattttctaatttagtatgcttaaagagtgcccc 255  Q
    || |||||||  |||||||||  |  ||| | ||||||||||||||||||    
T  27016711 gacttttttatggaataatttcttcttttggaatgcttaaagagtgcccc 27016662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 779156 - 779054
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaattta-gtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    |||| |||||||||||||||| |||  |||| || |||||||| |||||||  |||||||  | ||| |||||||||||||  |||||||||||||||||    
T  779156 tgtaatcaatgcattggaaatcgaaacattt-aactttttaaaaaataatta-ctaatttttgaatgtttaaagagtgcccagggggcactcgttaacaa 779059  T
Q  274 gactc 278  Q
    |||||    
T  779058 gactc 779054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 3758269 - 3758221
Alignment:
Q  177 tattcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    |||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  3758269 tattcaatgcattgaaaatcgaaatatttgacttttttaaagaataatt 3758221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 15720152 - 15720036
Alignment:
Q  161 tttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagggg 260  Q
    ||||||||||||| |||||| | | |||||||||||| | || |||| ||||| |||||||||||    ||||| |||||||| ||||||||  | |       
T  15720152 tttatgaaaagttgtgtattaagttcattggaaattgtaatagttgactttttaaaagaataattgataaatttggtatgcttgaagagtgcttcggaaa 15720053  T
Q  261 cactcgttaacaagact 277  Q
    |||||||||||||||||    
T  15720052 cactcgttaacaagact 15720036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 27833299 - 27833375
Alignment:
Q  149 aaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    ||||||||| | ||||||||||   ||||| ||||||||||| |||| ||| ||||||| |||| ||||||||||||    
T  27833299 aaatagtaagtatttatgaaaatgcatgtaatcaatgcattgtaaatcgaaatatttgacttttgtaaagaataatt 27833375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 9276586 - 9276665
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||| |||||  | || |||| ||||| ||| |||||||    
T  9276586 ttaaatagtaagtttttaatgaaaagttatgtattgaatgcattgaaaattataatagttgattttttaaaaaaataatt 9276665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 276
Target Start/End: Complemental strand, 10410467 - 10410420
Alignment:
Q  229 taatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||| | | |||||||||||||| ||||||||||||||||||||    
T  10410467 taatttagaaagtttaaagagtgccccgggggcactcgttaacaagac 10410420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 273
Target Start/End: Original strand, 27310260 - 27310347
Alignment:
Q  187 attggaaattgaactatttgaattttttaaagaataattttctaattta-gtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    ||||||||||||| | || || ||||||||||||||||||  |||||||   ||||||||||||||| || | |||||||| ||||||    
T  27310260 attggaaattgaattgttagacttttttaaagaataatttcataatttataaatgcttaaagagtgctccggaggcactcggtaacaa 27310347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 40872339 - 40872260
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||| ||||||| |||  ||||| | |||||||||||||||||| | | ||| |  |||||||||||||||||    
T  40872339 ttaaatagtaagtttttatcaaagtttatgaaatcaatgcattggaaattggagtttttaacctttttaaagaataattt 40872260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 253
Target Start/End: Complemental strand, 41520764 - 41520655
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttcta---atttagtatgctt 243  Q
    ||||||||||| ||||||| |||  ||||  | |||||||||||||||||| | | ||| | ||||||||||||| |||| |||   |||||| || |||    
T  41520764 ttaaatagtaagtttttatcaaagtttataaaatcaatgcattggaaattggagtttttaacttttttaaagaatgatttactatttatttagaatcctt 41520665  T
Q  244 aaagagtgcc 253  Q
    ||||||||||    
T  41520664 aaagagtgcc 41520655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 11010331 - 11010238
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgcc 253  Q
    |||||||| |||||| ||||||||||||||  ||||||||| |||| || ||||| || ||||| |||  |||||||| || | |||||||||||    
T  11010331 tttttatggaaagttgtgtattcaatgcatcagaaattgaagtattagactttttcaatgaatagtttcttaatttagaat-cctaaagagtgcc 11010238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 15699964 - 15700061
Alignment:
Q  183 atgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactcata 281  Q
    |||||||||||||||||||||||| | ||||||   |||||||| |||||| || ||  |||||||||||||   ||||||||| || |||||| ||||    
T  15699964 atgcattggaaattgaactatttg-actttttagtaaataatttcctaattaagaatctttaaagagtgcccttagggcactcgatagcaagacccata 15700061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 276
Target Start/End: Original strand, 248453 - 248598
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaag-aataattttcta 230  Q
    ||||||||||||   | ||||||||| |||||||| ||| || || ||||||| ||| |||||||||| | ||  | |||||||||| ||||||||  ||    
T  248453 cactctttaaggacttgaaatagtaaatttttatggaaaattgtgcattcaatacatcggaaattgaagtgttaaacttttttaaagaaataatttctta 248552  T
Q  231 atttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||| || |  ||||||||||||||    | ||||||||||||||||    
T  248553 attgagaaaccttaaagagtgcccttaagacactcgttaacaagac 248598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 9330409 - 9330446
Alignment:
Q  238 atgcttaaagagtgccccaggggcactcgttaacaaga 275  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  9330409 atgcttaaagagtgccccggggacactcgttaacaaga 9330446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 10044623 - 10044656
Alignment:
Q  29 tgatcaatttcacttttcaatacaatattaatta 62  Q
    ||||||||||||||||||||||||| ||||||||    
T  10044623 tgatcaatttcacttttcaatacaacattaatta 10044656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 17098234 - 17098322
Alignment:
Q  188 ttggaaattgaactatttgaattttttaaagaataattttctaatttagt-atgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||| ||| ||||||| ||||||||| |||||||  || |||| || ||| |||||||||||||| | | ||||||||||||||||    
T  17098234 ttggaaatcgaaatatttgacttttttaaataataattg-cttattttgtgatgtttaaagagtgccccggcgacactcgttaacaagac 17098322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 20364521 - 20364554
Alignment:
Q  29 tgatcaatttcacttttcaatacaatattaatta 62  Q
    ||||||||||||| ||||||||||||||||||||    
T  20364521 tgatcaatttcacctttcaatacaatattaatta 20364554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 24534556 - 24534589
Alignment:
Q  29 tgatcaatttcacttttcaatacaatattaatta 62  Q
    |||| |||||||||||||||||||||||||||||    
T  24534556 tgattaatttcacttttcaatacaatattaatta 24534589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 31889709 - 31889648
Alignment:
Q  153 agtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaatttttt 214  Q
    ||||||||||||||||||  | |||| |||||||||| ||||||||| ||||| | ||||||    
T  31889709 agtaactttttatgaaaatatgtgtaatcaatgcattagaaattgaaatattttactttttt 31889648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 3263752 - 3263712
Alignment:
Q  241 cttaaagagtgccccaggggcactcgttaacaagactcata 281  Q
    ||||||||||||||| |  ||||||||||||||||||||||    
T  3263752 cttaaagagtgccccggaagcactcgttaacaagactcata 3263712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 35585764 - 35585721
Alignment:
Q  36 tttcacttttcaatacaatattaattaattatcttttttcaattata 82  Q
    ||||||||||||||||||||||||||| ||   ||||||||||||||    
T  35585764 tttcacttttcaatacaatattaattactt---ttttttcaattata 35585721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 63
Target Start/End: Complemental strand, 39061102 - 39061074
Alignment:
Q  35 atttcacttttcaatacaatattaattaa 63  Q
    |||||||||||||||||||||||||||||    
T  39061102 atttcacttttcaatacaatattaattaa 39061074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 42877343 - 42877291
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaa 199  Q
    ||||||||||| |||||||| ||| || |||||||||| ||||| ||||||||    
T  42877343 ttaaatagtaaatttttatggaaaattgtgtattcaatacattgaaaattgaa 42877291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 4e-47; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 133 - 276
Target Start/End: Original strand, 6586410 - 6586552
Alignment:
Q  133 actctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaat 232  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||||    
T  6586410 actcgttaagggtcttaaatagtaactttttatgaaaatttatgttttcaatgcatcggaaattgaactatctgactttttcaaagattaatttcctaat 6586509  T
Q  233 ttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  6586510 ttagtatgcttaaagagtgcccca-gggcaatcgttaacaagac 6586552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 132 - 278
Target Start/End: Original strand, 25028690 - 25028835
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa 231  Q
    ||||||||||| |||||||||  ||||||||||| ||||  | |||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  25028690 cactctttaagagtcttaaattttaactttttataaaaacgtgtgtattcaatgcattgaaaattgaactgtttgacttttttaaagaataattttctaa 25028789  T
Q  232 tttagtatgcttaaagagtgccccaggggcactcgttaacaagactc 278  Q
    ||| | ||| ||||||||||  || | |||| |||||||||||||||    
T  25028790 ttttgaatgtttaaagagtg-tccggaggcattcgttaacaagactc 25028835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 1841062 - 1840974
Alignment:
Q  167 aaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgcccc 255  Q
    ||||||| |||||| |||||||||||||||| | || |||| ||||| ||||||||||| |  |||||| |||||||||||||||||||    
T  1841062 aaaagttgtgtattgaatgcattggaaattgtaatagttgattttttaaaagaataattattaaatttaatatgcttaaagagtgcccc 1840974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 3766360 - 3766250
Alignment:
Q  163 tatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggca 262  Q
    |||||||||||||||| | |||| |||  |||||| | || |||| ||||| |||||||||||| | ||||| | ||||||||||||||||   ||||||    
T  3766360 tatgaaaagttatgtaatgaatgtattataaattgtaataattgactttttaaaagaataatttccaaatttgggatgcttaaagagtgcc---ggggca 3766264  T
Q  263 ctcgttaacaagac 276  Q
    ||||||||||||||    
T  3766263 ctcgttaacaagac 3766250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 4810596 - 4810663
Alignment:
Q  209 ttttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||| | ||||||||| ||||||||||    
T  4810596 ttttttaaagaataattttctgatttagaatgcttaaatagtgcctcgggggcactctttaacaagac 4810663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 12132619 - 12132516
Alignment:
Q  154 gtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgcc 253  Q
    |||| ||| |||||||| || |||||| ||||||||| |||||||| |||||||  ||||||||||||| |||  |||| ||| |||||| |||||||||    
T  12132619 gtaagtttctatgaaaatttgtgtattaaatgcattgaaaattgaattatttgacgtttttaaagaatattttcataatatagaatgcttcaagagtgcc 12132520  T
Q  254 ccag 257  Q
    ||||    
T  12132519 ccag 12132516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 277
Target Start/End: Original strand, 31702708 - 31702875
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttga 207  Q
    |||||||||| ||||| || | |||||||||||||   |||||||||||||||||||| ||||  | |||| |||||||||| |||||| || || || |    
T  31702708 aaatgttaacgaatgttcctgggacactctttaagatccttaaatagtaactttttataaaaatatgtgtaatcaatgcattagaaattaaaatacttaa 31702807  T
Q  208 attttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagact 277  Q
     ||||||| | ||||||||  |  |||   || |||||||||||||||  || |||||||||||||||||    
T  31702808 cttttttataaaataatttcttcttttgaaattcttaaagagtgcccc--ggacactcgttaacaagact 31702875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 29408102 - 29407973
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||||||| ||||| | |||| ||||| | |||||||||| ||||||| | | ||||| ||||||||||||||||||  | |||  | || ||||||    
T  29408102 ttaaatagtaagtttttgtcaaaatttatgaaatcaatgcattagaaattggagtttttgacttttttaaagaataatttctttattaggaatccttaaa 29408003  T
Q  247 gagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||    ||||||||||||||||||    
T  29408002 gagtgcccttaaggcactcgttaacaagac 29407973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 30509388 - 30509286
Alignment:
Q  174 atgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    ||||| ||||||||||| |||| ||| | ||||| |||||||||||||||||   || ||| ||||||||||||||||  || | | |||||||||||||    
T  30509388 atgtaatcaatgcattgaaaatcgaaatgtttgatttttttaaagaataattgcttattttggtatgcttaaagagtgttccggagacactcgttaacaa 30509289  T
Q  274 gac 276  Q
    |||    
T  30509288 gac 30509286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 276
Target Start/End: Complemental strand, 35229378 - 35229262
Alignment:
Q  160 ttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggg 259  Q
    |||||||||||||| ||| ||||||| ||||||| ||| | ||| ||| ||||| ||||||||||     ||||| |  | ||||||||||| ||| |||    
T  35229378 ttttatgaaaagttgtgtgttcaatgtattggaatttgtaatatgtgactttttgaaagaataatcgctaaatttgggttccttaaagagtgtcccgggg 35229279  T
Q  260 gcactcgttaacaagac 276  Q
    |||||||||||||||||    
T  35229278 gcactcgttaacaagac 35229262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 278
Target Start/End: Complemental strand, 7465568 - 7465446
Alignment:
Q  155 taactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccc 254  Q
    ||||| ||| |||||| ||||||| ||||||||| |||||||||| ||||||| |||||||  ||| |||||  |  || || || |||||| |||||||    
T  7465568 taactctttttgaaaatttatgtaatcaatgcatcggaaattgaaatatttgacttttttatggaacaatttcttctttaagaatccttaaaaagtgccc 7465469  T
Q  255 caggggcactcgttaacaagactc 278  Q
      ||||||||||||||||| ||||    
T  7465468 g-ggggcactcgttaacaaaactc 7465446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 275
Target Start/End: Original strand, 34231979 - 34232090
Alignment:
Q  164 atgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcac 263  Q
    |||||||||| |||||| ||| ||||| |||||| |  | ||   ||||||||||||||||| |  ||||||  ||| |||||||||||| | |||||||    
T  34231979 atgaaaagttgtgtattaaatacattgaaaattgcaacagttattttttttaaagaataattattaaatttaagatggttaaagagtgcctccggggcac 34232078  T
Q  264 tcgttaacaaga 275  Q
    ||||||||||||    
T  34232079 tcgttaacaaga 34232090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 13445801 - 13445867
Alignment:
Q  210 tttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||||||| ||   |||||||| ||||||||||||||| || ||| ||||||||||||||||    
T  13445801 tttttaaagaatacttacttaatttagcatgcttaaagagtgcaccggggacactcgttaacaagac 13445867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 2692437 - 2692565
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||||||| |||| || ||||||| |||||||| | |||||||||||| | || |||| ||||| ||| |||||||    ||||| | || ||||||    
T  2692437 ttaaatagtaaattttaataaaaagttgtgtattcacttcattggaaattgtaatagttgactttttaaaataataattactaaattttggattcttaaa 2692536  T
Q  247 gagtgccccaggggcactcgttaacaagac 276  Q
    ||||| ||| || ||||| |||||||||||    
T  2692537 gagtgtccc-ggtgcacttgttaacaagac 2692565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 22020534 - 22020607
Alignment:
Q  153 agtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||| ||||||| |||| ||||| | |||||||||||||||||| | | ||||| ||||||||| ||||||||    
T  22020534 agtaagtttttatcaaaatttatgaaatcaatgcattggaaattggagtttttgacttttttaaataataattt 22020607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 22055031 - 22055104
Alignment:
Q  153 agtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||| ||||||| |||| ||||| | |||||||||||||||||| | | ||||| ||||||||| ||||||||    
T  22055031 agtaagtttttatcaaaatttatgaaatcaatgcattggaaattggagtttttgacttttttaaataataattt 22055104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 387479 - 387570
Alignment:
Q  183 atgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaaga 275  Q
    ||||||| ||||||||| | ||| | |||||||||  |||||||| |||||||| ||| |||||||||||  || |||||||||||| |||||    
T  387479 atgcatttgaaattgaattgtttaacttttttaaaatataattttttaatttagaatg-ttaaagagtgcttcaagggcactcgttatcaaga 387570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 15588771 - 15588679
Alignment:
Q  130 gacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaata 222  Q
    |||||||||||||  || | || ||||| |||||||||||| ||||||| ||||||||||| || ||| |  |||| | ||||||||||||||    
T  15588771 gacactctttaagaatcattaacagtaagtttttatgaaaaattatgtaatcaatgcattgaaatttgtaacatttaatttttttaaagaata 15588679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 34185070 - 34185162
Alignment:
Q  184 tgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||||||||| | ||| |   ||||||||||||||||  | |||  | |||||||||||||||||| | |||||| |||||||||||    
T  34185070 tgcattggaaattgaagtctttaatcattttaaagaataatttctttattaggaatgcttaaagagtgccccggaggcacttgttaacaagac 34185162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 10345999 - 10346081
Alignment:
Q  145 tcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatttt 227  Q
    |||||| |||||| ||||| | | || ||||||| ||||||||||| |||||||| | ||| | ||||||||| |||||||||    
T  10345999 tcttaattagtaaatttttgttagaatttatgtaatcaatgcattgaaaattgaagtttttaacttttttaaaaaataatttt 10346081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 2310437 - 2310408
Alignment:
Q  33 caatttcacttttcaatacaatattaatta 62  Q
    ||||||||||||||||||||||||||||||    
T  2310437 caatttcacttttcaatacaatattaatta 2310408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 15081381 - 15081410
Alignment:
Q  33 caatttcacttttcaatacaatattaatta 62  Q
    ||||||||||||||||||||||||||||||    
T  15081381 caatttcacttttcaatacaatattaatta 15081410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 25398884 - 25398940
Alignment:
Q  37 ttcacttttcaatacaatattaattaattatcttttttcaattatacatcttaattaata 96  Q
    ||||||||||||| |||||||||||||||   |||||||||||||| |  ||||||||||    
T  25398884 ttcacttttcaatgcaatattaattaatt---ttttttcaattatatactttaattaata 25398940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 2865016 - 2864925
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaacttttt--atgaaaagttatgtattcaatgcattggaaattg 197  Q
    |||||||||||| || ||| ||||||||||||||   | |||||| |||| |||||  ||||||| || |||||| ||||||||| ||||||    
T  2865016 aaatgttaactagtgcccccgagacactctttaaacattttaaatggtaagttttttgatgaaaaattgtgtatttaatgcattgtaaattg 2864925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 30396334 - 30396267
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatttt 227  Q
    ||||| |||||| ||||||| ||||||||||| |||||| | |||||| |||||||| | |||||||||    
T  30396334 tttttttgaaaatttatgtaatcaatgcattgaaaattgtaatatttg-attttttataaaataatttt 30396267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 6e-43; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 132 - 276
Target Start/End: Complemental strand, 31265111 - 31264967
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa 231  Q
    ||||||||||| | || |||||||||||||||||||||| || |||||| ||| |||||||||||||| | ||||| ||||||||||||||| || ||||    
T  31265111 cactctttaagagcctaaaatagtaactttttatgaaaacttgtgtatttaatacattggaaattgaattgtttgacttttttaaagaataacttcctaa 31265012  T
Q  232 tttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||    
T  31265011 tttagcatgcttaaagagtgccacaggggcactcgttaacaagac 31264967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 135 - 273
Target Start/End: Original strand, 39691109 - 39691247
Alignment:
Q  135 tctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaattt 234  Q
    ||||||||| ||||||||||||| |||||||||||| || |||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||| |    
T  39691109 tctttaaggatcttaaatagtaattttttatgaaaatttgtgtattcaatgcattgaaaattgaactatttgacttttttaaagaataattttttaatgt 39691208  T
Q  235 agtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
     | |||||||||||||| | |  ||||||||||||||||    
T  39691209 ggaatgcttaaagagtgtctcgagggcactcgttaacaa 39691247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 150 - 278
Target Start/End: Original strand, 37564342 - 37564470
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagag 249  Q
    ||||||||| ||||||||||| || |||||| ||| |||||||||||||||||||||| ||||||||||||||||||  |||||||| ||| ||||||||    
T  37564342 aatagtaaccttttatgaaaacttgtgtatttaatacattggaaattgaactatttgacttttttaaagaataatttcttaatttagcatgtttaaagag 37564441  T
Q  250 tgccccaggggcactcgttaacaagactc 278  Q
    || ||||| ||||||||||||||||||||    
T  37564442 tgtcccagaggcactcgttaacaagactc 37564470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 132 - 278
Target Start/End: Complemental strand, 25280042 - 25279897
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa 231  Q
    ||||||||||| | || ||||||||| |||||||||||| ||||||||| ||| |||||||||||||| |||||| | |||||||||||||| || ||||    
T  25280042 cactctttaagagcctaaaatagtaaatttttatgaaaacttatgtatttaatacattggaaattgaattatttg-actttttaaagaataacttcctaa 25279944  T
Q  232 tttagtatgcttaaagagtgccccaggggcactcgttaacaagactc 278  Q
    ||||| |||||||||||||| |  |||||||||||||||||||||||    
T  25279943 tttagcatgcttaaagagtgtcgtaggggcactcgttaacaagactc 25279897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 280
Target Start/End: Complemental strand, 12002405 - 12002233
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttga 207  Q
    |||||||||||| |||||  | | ||||  |||||| ||||||||||||||||||||| |||| || |||| ||| ||||||||||||||||   ||| |    
T  12002405 aaatgttaactagtgtccacggggcactggttaaggatcttaaatagtaactttttataaaaatttgtgtaatcagtgcattggaaattgaaaactttta 12002306  T
Q  208 attttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactcat 280  Q
      ||||||||||||||||   ||||||||||| |||||||||||||||  ||  |||||||||||||||||||    
T  12002305 catttttaaagaataattacttaatttagtatacttaaagagtgccccgaggatactcgttaacaagactcat 12002233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 1502660 - 1502782
Alignment:
Q  130 gacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaa-ttttttaaagaataattttc 228  Q
    ||||||||||||| |||| || |||||| |||||||||||| ||  ||||| ||||||||| |||||||||| |||||| |||||||||||||||||| |    
T  1502660 gacactctttaagagtctaaagtagtaattttttatgaaaatttgcgtatttaatgcattgaaaattgaactgtttgaatttttttaaagaataatttcc 1502759  T
Q  229 taatttagtatgcttaaagagtg 251  Q
    |||||||| ||| ||||||||||    
T  1502760 taatttagaatgtttaaagagtg 1502782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 147 - 275
Target Start/End: Original strand, 1876489 - 1876617
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    |||||| |||| |||||||||||  || |||| ||| ||||||||||||||||   |||||  |||| |||||||||||   |||||||| |||||||||    
T  1876489 ttaaatggtaattttttatgaaagtttgtgtaatcagtgcattggaaattgaaaattttgacattttaaaagaataattacttaatttagcatgcttaaa 1876588  T
Q  247 gagtgccccaggggcactcgttaacaaga 275  Q
    ||||||||| |||||||||||||||||||    
T  1876589 gagtgccccgggggcactcgttaacaaga 1876617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 133 - 265
Target Start/End: Original strand, 41105991 - 41106123
Alignment:
Q  133 actctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaat 232  Q
    |||||||||||  ||||||| |||| |||||| ||||| || || ||||||||||||| |||||||||||||||| |||||||| || ||||||  ||||    
T  41105991 actctttaaggaccttaaatggtaagtttttacgaaaaattgtgaattcaatgcattgaaaattgaactatttgacttttttaatgattaatttcttaat 41106090  T
Q  233 ttagtatgcttaaagagtgccccaggggcactc 265  Q
    || | || || ||| ||||||||||||||||||    
T  41106091 ttggaatcctcaaacagtgccccaggggcactc 41106123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 275
Target Start/End: Original strand, 29487057 - 29487195
Alignment:
Q  138 ttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaa-ttttttaaagaataattttctaatttag 236  Q
    |||||||| |||| |||||||||||||| ||||  | |||||| ||||||||| |||||||||||||| || ||||||||||||||||||  ||||||||    
T  29487057 ttaagggttttaagtagtaactttttataaaaatatgtgtattaaatgcattgaaaattgaactatttaaacttttttaaagaataatttcttaatttag 29487156  T
Q  237 tatgcttaaagagtgccccaggggcactcgttaacaaga 275  Q
     ||  | |||||||||||  |   |||||||||||||||    
T  29487157 aatattaaaagagtgccctggaaacactcgttaacaaga 29487195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 20279590 - 20279691
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaag 274  Q
    |||||| |||| |||| |||||||| ||||||| ||||| |||||||||||   || ||||| |||||||||||||||||| |||||||| |||||||||    
T  20279590 tgtatttaatgtattgaaaattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccgggggcacttgttaacaag 20279689  T
Q  275 ac 276  Q
    ||    
T  20279690 ac 20279691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 21066217 - 21066318
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaag 274  Q
    |||||| |||| |||| |||||||| ||||||| ||||| |||||||||||   || ||||| |||||||||||||||||| |||||||| |||||||||    
T  21066217 tgtatttaatgtattgaaaattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccgggggcacttgttaacaag 21066316  T
Q  275 ac 276  Q
    ||    
T  21066317 ac 21066318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 276
Target Start/End: Complemental strand, 28207711 - 28207594
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagg 258  Q
    |||| |||||||||| |||||| |||||||||||||||| | || |||| ||||| ||||||| ||| |  ||||| | |||||||||||||| | | ||    
T  28207711 ttttaatgaaaagttgtgtattgaatgcattggaaattgtaatagttgactttttaaaagaattattgttaaatttgggatgcttaaagagtgtctcggg 28207612  T
Q  259 ggcactcgttaacaagac 276  Q
    ||||||||||||||||||    
T  28207611 ggcactcgttaacaagac 28207594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 135 - 277
Target Start/End: Complemental strand, 12640040 - 12639899
Alignment:
Q  135 tctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaattt 234  Q
    ||||||||||| | || |||||| ||||||||||||||| |||| ||||||  ||| |||| ||| ||||| | ||||||||  | |||||| |||||||    
T  12640040 tctttaagggtttaaagtagtaa-tttttatgaaaagttgtgtaatcaatgttttgaaaatcgaattatttaacttttttaataattaatttcctaattt 12639942  T
Q  235 agtatgcttaaagagtgccccaggggcactcgttaacaagact 277  Q
    || ||||||||| ||||  || | |||||||||||||||||||    
T  12639941 agaatgcttaaaaagtgttccggaggcactcgttaacaagact 12639899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 15352117 - 15352182
Alignment:
Q  187 attggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgc 252  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||||||| ||| |||||||||||    
T  15352117 attggaaattgaactatttgacttttttacagaataattttttaatttagaatgtttaaagagtgc 15352182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 25382694 - 25382590
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaatttttt-aaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    |||||| |||||||||||||||| ||||||| | |||||| ||||||||||||  |||||| | ||||||||| | |||  | |||||||||||||||||    
T  25382694 tgtatttaatgcattggaaattggactattttactttttttaaagaataatttcttaatttggaatgcttaaaaaatgcttcgggggcactcgttaacaa 25382595  T
Q  274 gactc 278  Q
    |||||    
T  25382594 gactc 25382590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 276
Target Start/End: Complemental strand, 12230078 - 12229963
Alignment:
Q  156 aactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgcccc 255  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||||||  | |||||||||||||||||  | |||||| ||||    ||||||| |     
T  12230078 aactttttatgaaaaattatgtattcaaggccttggaaattgaactattt-cactttttaaagaataatttcttgatttagaatgc----agagtgctca 12229984  T
Q  256 aggggcactcgttaacaagac 276  Q
    | || ||||||||||||||||    
T  12229983 aaggacactcgttaacaagac 12229963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 42022640 - 42022703
Alignment:
Q  187 attggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagt 250  Q
    ||||||||||||||||||||| ||||||||| ||||||||| |||||||  |||||||||||||    
T  42022640 attggaaattgaactatttgacttttttaaaaaataattttttaatttaaaatgcttaaagagt 42022703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 42760161 - 42760283
Alignment:
Q  154 gtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgcc 253  Q
    |||||||||||  |||| ||||||| ||||||||||||||||||||  |||||| |||||||  |||||||||     ||| | ||||||||||||||      
T  42760161 gtaactttttaaaaaaaattatgtaatcaatgcattggaaattgaaacatttgatttttttatggaataatttctccttttggaatgcttaaagagtg-t 42760259  T
Q  254 ccaggggcactcgttaacaagact 277  Q
    ||||||| ||||||||||||||||    
T  42760260 ccaggggaactcgttaacaagact 42760283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 42636372 - 42636502
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    |||||| |||| |||||| ||||||||| |||||| ||||||||| |||||| | || |||| |||||| || |||||||    ||||| | ||||||||    
T  42636372 ttaaatggtaagtttttaatgaaaagttgtgtattaaatgcattgtaaattgtaatagttgacttttttgaataataattactaaatttgggatgcttaa 42636471  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||| || |||||| ||||||||||    
T  42636472 agagtgccccgggagcactccttaacaagac 42636502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 34336480 - 34336585
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||||||| ||||| | |||  ||||| | |||||||||||||||||||| | ||||| ||||||||||||||||||  | ||| || || ||||||    
T  34336480 ttaaatagtaagtttttgtcaaagtttatgaaatcaatgcattggaaattgaagtttttgacttttttaaagaataatttctttattaagaatccttaaa 34336579  T
Q  247 gagtgc 252  Q
    ||||||    
T  34336580 gagtgc 34336585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 277
Target Start/End: Complemental strand, 41385379 - 41385234
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa 231  Q
    ||||||||||||||  ||||||||||  |||| |||||| || |||| ||||| ||||| ||||||||  || ||| ||| |||| |||||||||  ||     
T  41385379 cactctttaagggttataaatagtaaaattttgtgaaaatttgtgtaatcaatacattgaaaattgaaacatctgactttcttaaggaataatttcttat 41385280  T
Q  232 tttagtatgcttaaagagtgccccaggggcactcgttaacaagact 277  Q
    ||| |  |||||||||| |||| | ||| |||||||||||||||||    
T  41385279 tttggattgcttaaagaatgcctcggggacactcgttaacaagact 41385234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 275
Target Start/End: Original strand, 14016835 - 14017002
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttga 207  Q
    |||||||||||| || ||| | | ||||  ||||||  |||||||||||| ||||||| |||  || |||  ||| ||||||||||||||||   ||| |    
T  14016835 aaatgttaactagtgcccccggggcactagttaaggaccttaaatagtaattttttataaaagtttgtgtgatcagtgcattggaaattgaaaactttta 14016934  T
Q  208 attttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaaga 275  Q
    | |||| ||||||| |||   | |||||| |||||||||||||||||| | |||||| ||||||||||    
T  14016935 aattttgaaagaatcattactttatttagcatgcttaaagagtgccccggaggcactagttaacaaga 14017002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 276
Target Start/End: Complemental strand, 11533340 - 11533202
Alignment:
Q  138 ttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagt 237  Q
    ||||||| ||||||| |||| |||||||||||  || ||  |||| ||||||||||||||||   |||||  |||||||||||||||||  |||||||      
T  11533340 ttaagggccttaaatggtaattttttatgaaagtttgtgccttcagtgcattggaaattgaaaactttgacatttttaaagaataatttattaatttaac 11533241  T
Q  238 atgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||| |||||||||| |||     ||||||||||||||||    
T  11533240 atgtttaaagagtgtcccgaaaacactcgttaacaagac 11533202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 24869450 - 24869384
Alignment:
Q  210 tttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||| |||||||||   |||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  24869450 tttttagagaataattacttaatttagcatgtttaaagagtgccacaggggcactcgttaacaagac 24869384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 251
Target Start/End: Original strand, 25163031 - 25163133
Alignment:
Q  149 aaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaaga 248  Q
    |||| |||| |||||||||||  |||| || |  ||||||||||||||||| ||||||| |||||  |||||||||||| |||||| | || ||||||||    
T  25163031 aaattgtaaatttttatgaaagtttatttaatttatgcattggaaattgaaatatttgactttttctaagaataattttttaattttgaatacttaaaga 25163130  T
Q  249 gtg 251  Q
    |||    
T  25163131 gtg 25163133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 27801232 - 27801362
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| |||||| | ||||||| |||| | ||||||||| |||||| | || |||| ||||| |||||||||||    ||||||| ||| ||||    
T  27801232 ttaaatagtaagtttttaataaaaagttgtgtaatgaatgcattgaaaattgtaatagttgactttttaaaagaataattactaaatttagaatgattaa 27801331  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    |||||| |   ||||||||||||||||||||    
T  27801332 agagtgtcatgggggcactcgttaacaagac 27801362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 28460036 - 28460130
Alignment:
Q  184 tgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactc 278  Q
    |||||||||||||||| | ||| | | ||||||| ||||||||| | |||  | |||||||||||||||||| ||  ||||||||||||||||||    
T  28460036 tgcattggaaattgaagtctttaattattttaaaaaataatttttttattaggaatgcttaaagagtgccccgggatcactcgttaacaagactc 28460130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 31844224 - 31844353
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaa-tgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    |||||||||||||||||||||||  || | || | || ||||||||||||| ||   ||||| |||||||| ||||||||   |||||||| ||  ||||    
T  31844224 ttaaatagtaactttttatgaaagtttgtataatgaagtgcattggaaattcaaaactttgacttttttaaggaataattacttaatttagaatatttaa 31844323  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    |||||| ||| ||||||||||||||||||||    
T  31844324 agagtg-ccctggggcactcgttaacaagac 31844353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 6073330 - 6073225
Alignment:
Q  146 cttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||| |||| |||||||||| | ||||| ||||| ||||||  |||||||| ||||||| ||| | |||||||| |||| |||||  | ||||||||    
T  6073330 cttaaatggtaagtttttatgaagatttatgaattcagtgcattaaaaattgaattatttgattttgtaaaagaatatttttttaattaggaatgcttaa 6073231  T
Q  246 agagtg 251  Q
    ||||||    
T  6073230 agagtg 6073225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 33013130 - 33013041
Alignment:
Q  161 tttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagt 250  Q
    ||||||||||||| |||||| | | |||||||||||| | || |||| ||||| ||||||||||| |  ||||| |||||||||||||||    
T  33013130 tttatgaaaagttgtgtattgagtacattggaaattgtaatagttgactttttaaaagaataattgttaaatttggtatgcttaaagagt 33013041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 44254134 - 44254263
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||||||| ||||| | |||| ||||| | |||||||||||||||||||| | ||||| |||||||| ||| |||||  | |||    || ||||||    
T  44254134 ttaaatagtaagtttttgtcaaaatttatgaaatcaatgcattggaaattgaagtttttgacttttttaaggaagaatttctttattagaaatccttaaa 44254233  T
Q  247 gagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||   || ||||||||||||||||    
T  44254234 gagtgcccttaggacactcgttaacaagac 44254263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 2376734 - 2376838
Alignment:
Q  146 cttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||||||||||||||||  |||| || | ||| | || |||||||||   |||||  |||||||||||||||| | |||||||  ||||||||    
T  2376734 cttaaatagtaactttttatgaaagtttatataattaatacgttagaaattgaaaactttgatatttttaaagaataattatttaatttaaaatgcttaa 2376833  T
Q  246 agagt 250  Q
    |||||    
T  2376834 agagt 2376838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 15271117 - 15271038
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||| ||||| | |||| ||||| | |||||||||||||||||  | | ||||| ||||||||||||||||||    
T  15271117 ttaaatagtaagtttttgtcaaaatttatgaaatcaatgcattggaaattcgagtttttgacttttttaaagaataattt 15271038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 37426427 - 37426384
Alignment:
Q  238 atgcttaaagagtgccccaggggcactcgttaacaagactcata 281  Q
    |||||||||||||| |||||||||||||||||||||||| ||||    
T  37426427 atgcttaaagagtgtcccaggggcactcgttaacaagacccata 37426384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 255
Target Start/End: Original strand, 37813423 - 37813518
Alignment:
Q  161 tttatgaaaagttatgtattcaatgcattggaaattgaactatttgaatttttt-aaagaataattttctaatttagtatgcttaaagagtgcccc 255  Q
    ||||||||||||| ||||||||||||||||||||||| | |  |||| |||||| |||||||||||    ||||| | || |||||||||||||||    
T  37813423 tttatgaaaagttgtgtattcaatgcattggaaattgtaatggttgacttttttaaaagaataattactaaatttgggatccttaaagagtgcccc 37813518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 277
Target Start/End: Original strand, 167868 - 167979
Alignment:
Q  164 atgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcac 263  Q
    ||||||||||||||| | |||||||||||||||  | || |||| ||||| |||||||||||||  |||||   || |||||||||||   | |||||||    
T  167868 atgaaaagttatgtaataaatgcattggaaattataatagttgactttttaaaagaataatttttaaatttgagatacttaaagagtg--tcgggggcac 167965  T
Q  264 tcgttaacaagact 277  Q
    ||| ||||||||||    
T  167966 tcgctaacaagact 167979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 37167091 - 37167042
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  37167091 tgtattcaatgcattggaaatcgaactattt-aattttttgaagaataatt 37167042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 39093156 - 39093054
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt-tctaatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    |||| |||||||||||||| | ||| ||||  | |||||||||||||||||  | |  ||| ||||||||||||||| |||| ||| |||||||||||||    
T  39093156 tgtaatcaatgcattggaactcgaaatattatacttttttaaagaataattgcttttgtttggtatgcttaaagagtaccccggggacactcgttaacaa 39093057  T
Q  274 gac 276  Q
    |||    
T  39093056 gac 39093054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 39851995 - 39852045
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattca 182  Q
    |||||||||||||| | || |||||||||||||||||||||| ||||||||    
T  39851995 cactctttaagggtttaaagtagtaactttttatgaaaagttgtgtattca 39852045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 273
Target Start/End: Complemental strand, 44042636 - 44042510
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||||||| |||||||  ||| || || |||||||||||||||||||||| ||||  | ||||| || ||||| |||  |||||  | || ||||||    
T  44042636 ttaaatagtaagtttttatagaaatttgtgcattcaatgcattggaaattgaagtattgaactttttcaatgaatagtttcttaattatgaatccttaaa 44042537  T
Q  247 gagtgccccaggggcactcgttaacaa 273  Q
    ||||| ||   ||||||||||||||||    
T  44042536 gagtgtccttagggcactcgttaacaa 44042510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 279
Target Start/End: Complemental strand, 9460522 - 9460425
Alignment:
Q  182 aatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactca 279  Q
    |||| |||| |||| ||| | ||||| |||| ||||||||||||   |  ||| |||||||||| ||||||||  |||||||||||||||||||||||    
T  9460522 aatgtattgaaaatcgaaatgtttgacttttctaaagaataattgcttgttttggtatgcttaacgagtgccctcggggcactcgttaacaagactca 9460425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 24733286 - 24733145
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa 231  Q
    |||||||||||   ||| |||||||| ||||||| |||| || |||| |||||||| || || ||| |  |||||| ||||||| |||||| ||||  ||    
T  24733286 cactctttaagtacctttaatagtaagtttttataaaaatttgtgtaatcaatgcactgtaatttgtaacatttgacttttttagagaatattttttaaa 24733187  T
Q  232 tttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    ||| | || ||||||||||  ||| ||| |||||||||||||    
T  24733186 tttgggatccttaaagagtatcccggggacactcgttaacaa 24733145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 1773891 - 1773943
Alignment:
Q  229 taatttagtatgcttaaagagtgccccaggggcactcgttaacaagactcata 281  Q
    |||||||| | ||||||||| |||||| | |||||||||||||||||||||||    
T  1773891 taatttagaaagcttaaagactgccccggaggcactcgttaacaagactcata 1773943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 12782839 - 12782747
Alignment:
Q  184 tgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||||| ||| ||||  | |||||||||||||||||   || ||||||||||||||||||||  || | | || |||||||||||||    
T  12782839 tgcattggaaatcgaaatattcaacttttttaaagaataattgcatattttagtatgcttaaagagtgttccggagacattcgttaacaagac 12782747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 16723237 - 16723341
Alignment:
Q  182 aatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactcata 281  Q
    |||| |||| |||||| | || |||| ||||| |||||||||||    ||||| | |||||||||||||||||  ||| |||||||||||||||| ||||    
T  16723237 aatgtattgaaaattgtattagttgattttttaaaagaataattacaaaatttgggatgcttaaagagtgccctggggtcactcgttaacaagacccata 16723336  T
Q  282 ctaat 286  Q
     ||||    
T  16723337 ataat 16723341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 276
Target Start/End: Complemental strand, 30535084 - 30534988
Alignment:
Q  180 tcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||||| ||||||||  |||||| |||||||  |||||||||     ||||| ||||||||||||| | |||| | ||||||||||||||||    
T  30535084 tcaatgcattgaaaattgaaacatttgatttttttatggaataatttctccttttagaatgcttaaagagtactccagagacactcgttaacaagac 30534988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 1369882 - 1369965
Alignment:
Q  163 tatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||||||||| |||| ||||||||||||||||   || |||| ||||| |||||||||||    ||||||| |||||||||    
T  1369882 tatgaaaagttatctattgaatgcattggaaattgtgatagttgactttttaaaagaataattgctaaatttaggatgcttaaa 1369965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 4384163 - 4384246
Alignment:
Q  168 aaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtg 251  Q
    |||||| |||||| |||||||||||||||| | || |||| ||||| |||||||||||    |||||||  |||||||||||||    
T  4384163 aaagttgtgtattgaatgcattggaaattgtaatagttgattttttaaaagaataattactaaatttagggtgcttaaagagtg 4384246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 12787943 - 12787844
Alignment:
Q  151 atagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagt 250  Q
    ||||||| |||||||||||| || || ||| |||| |||||||||||||  |||  | ||||| ||  ||||||||| |||||||| || ||||||||||    
T  12787943 atagtaagtttttatgaaaatttgtgcatttaatgaattggaaattgaagcattatactttttcaataaataattttttaatttagaattcttaaagagt 12787844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 33949571 - 33949662
Alignment:
Q  161 tttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgc 252  Q
    ||||||||||||| |||||| | |||||| ||||||| | || |||||||||| ||| |||| ||    |||||| ||||||||||||||||    
T  33949571 tttatgaaaagttgtgtattgagtgcatttgaaattgtaatagttgaatttttaaaacaatacttactaaatttaatatgcttaaagagtgc 33949662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 35902031 - 35901952
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    ||||||| ||| |||||| ||||||||| |||||| |||||||||||||||| | || |||| ||||| ||| |||||||    
T  35902031 ttaaataataagtttttaatgaaaagttctgtattgaatgcattggaaattgtaataattgactttttaaaaaaataatt 35901952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 42801142 - 42801044
Alignment:
Q  182 aatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactcata 281  Q
    ||||||||| |||||||| ||||||  |||| ||||||||||||   || ||||| || |||||| |||| | | |||||||||||||||||||| ||||    
T  42801142 aatgcattgaaaattgaaatatttgccttttgtaaagaataattacttattttagaatacttaaaaagtgtcac-ggggcactcgttaacaagacgcata 42801044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 273
Target Start/End: Complemental strand, 13028200 - 13028103
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    |||||| | ||||||| |||||| | || | || ||||| |||||||||||    ||||||| |||||||||||||||| | |||||||||||||||||    
T  13028200 tgtattgagtgcattgaaaattgtaataatagattttttaaaagaataattgataaatttagaatgcttaaagagtgcctc-ggggcactcgttaacaa 13028103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 24695846 - 24695768
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    ||||||||||| |||| || ||||||| |||||||| |||||| ||||||| | || |||| ||||| ||| |||||||    
T  24695846 ttaaatagtaagttttaataaaaagttgtgtattcactgcattagaaattgtaatagttgactttttaaaataataatt 24695768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 27734375 - 27734469
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgtta 269  Q
    ||||||||||||||||||| ||| | |||| || ||||| || |||||||||   ||||| | || |||||||||||  || |||||||||||||    
T  27734375 tgtattcaatgcattggaatttgtaatattagactttttgaaggaataatttctaaatttgggatccttaaagagtgatccgggggcactcgtta 27734469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 36348523 - 36348625
Alignment:
Q  174 atgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    ||||| ||||||||||| ||||  || | ||| | |||||||||||||||||   || |||||| |||||||| |||||||| | | || ||||||||||    
T  36348523 atgtaatcaatgcattgaaaatcaaaatgtttaacttttttaaagaataattgcttattttagtgtgcttaaaaagtgccccggagacattcgttaacaa 36348622  T
Q  274 gac 276  Q
    |||    
T  36348623 gac 36348625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 38908780 - 38908847
Alignment:
Q  29 tgatcaatttcacttttcaatacaatattaattaattatcttttttcaattatacatcttaattaatacta 99  Q
    ||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||  || ||||||||||||    
T  38908780 tgatctatttcacttttcaatacaatatcaatt-attat-ttttttcaattataactc-taattaatacta 38908847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 39644203 - 39644269
Alignment:
Q  209 ttttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaaga 275  Q
    ||||| ||||||||||||| || || || ||||||||||||||| |||  | |||||||||||||||    
T  39644203 tttttaaaagaataattttttagttaagaatgcttaaagagtgctccaaagacactcgttaacaaga 39644269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 44225491 - 44225566
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttag 236  Q
    ||||| |||||| |||||||||||||||| |  ||||| || ||| |  |||||||||||||||||||| ||||||||    
T  44225491 tttttttgaaaatttatgtattcaatgcactcaaaattaaaatatct--attttttaaagaataattttttaatttag 44225566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 11077962 - 11077889
Alignment:
Q  203 tttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||||||||||||||||   |  ||| |||||| ||||||||||  | |||||||| |||||||||||    
T  11077962 tttgaattttttaaagaataattgcttgttttggtatgcataaagagtgcatctggggcacttgttaacaagac 11077889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 11727905 - 11727985
Alignment:
Q  145 tcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||| ||| |||| ||||||| || | |||| |||| |||| |||||||| ||||||| |||| |||||||||||||    
T  11727905 tcttaaataataagttttaatgaaaatttgtatatttaatgtattgaaaattgaagtatttgactttt-taaagaataattt 11727985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 24457926 - 24457837
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttag 236  Q
    ||||||||||| |||||||||||| || ||  || |||||||| |||||||||  ||| || ||||| || ||||| |||| ||||||||    
T  24457926 ttaaatagtaagtttttatgaaaacttgtgcttttaatgcatttgaaattgaaacattagactttttcaatgaatagttttttaatttag 24457837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 8418452 - 8418390
Alignment:
Q  35 atttcacttttcaatacaatattaattaattatcttttttcaattatacatcttaattaatacta 99  Q
    |||||||||||||||| |||| || |||||||| ||||||||||||||  || ||||||||||||    
T  8418452 atttcacttttcaatataatagta-ttaattattttttttcaattataactc-taattaatacta 8418390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 9124093 - 9124133
Alignment:
Q  238 atgcttaaagagtgccccaggggcactcgttaacaagactc 278  Q
    |||||||||||||||||| |  |||||||||||||||||||    
T  9124093 atgcttaaagagtgccccggaagcactcgttaacaagactc 9124133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 11078158 - 11078118
Alignment:
Q  148 taaatagtaactttttatgaaaagttatgtattcaatgcat 188  Q
    |||||||||| |||||||||||| ||||| |||||||||||    
T  11078158 taaatagtaaatttttatgaaaaattatgcattcaatgcat 11078118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 11334119 - 11334071
Alignment:
Q  179 ttcaatgcattggaaattgaactatttgaattttttaaagaataatttt 227  Q
    ||||||||||| |||||||||||||||||  |||| ||| |||||||||    
T  11334119 ttcaatgcattagaaattgaactatttgaccttttaaaataataatttt 11334071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 18808786 - 18808902
Alignment:
Q  160 ttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggg 259  Q
    ||||||||||  ||||| ||| | |||||| ||||||||| | |||   ||||||||| |||| |||  | |||  | ||| |||||||||||||| ||     
T  18808786 ttttatgaaagtttatgcatttattgcattagaaattgaagtctttactttttttaaacaatagtttcttcattaggaatgtttaaagagtgccccggga 18808885  T
Q  260 gcactcgttaacaagac 276  Q
    |||||||||||||||||    
T  18808886 gcactcgttaacaagac 18808902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 32228249 - 32228289
Alignment:
Q  195 ttgaactatttgaattttttaaagaataattttctaattta 235  Q
    ||||| ||||| ||||||||||||||||||||||| |||||    
T  32228249 ttgaagtattttaattttttaaagaataattttctgattta 32228289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 36907899 - 36907847
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaa 199  Q
    ||||||||||||||||||| |||  || |||| ||| ||||||||||||||||    
T  36907899 ttaaatagtaactttttataaaagtttgtgtaatcattgcattggaaattgaa 36907847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 42880936 - 42880880
Alignment:
Q  144 gtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaac 200  Q
    |||||||||||||| ||||||| ||||  | |||||| ||||||| |||||||||||    
T  42880936 gtcttaaatagtaattttttataaaaacatgtgtatttaatgcatcggaaattgaac 42880880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 44960559 - 44960519
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattg 190  Q
    |||||||| |||||||||||| ||||||| |||||||||||    
T  44960559 aatagtaaatttttatgaaaatttatgtaatcaatgcattg 44960519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 4e-41; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 155 - 276
Target Start/End: Original strand, 35599817 - 35599938
Alignment:
Q  155 taactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccc 254  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||  |     
T  35599817 taactttttatgaaaagttatgtattcaatgcattgaaatttgaactatttgaattttttaaagaataatttcctaatttagtatgtttaaagagtatct 35599916  T
Q  255 caggggcactcgttaacaagac 276  Q
    | | ||||||||||||||||||    
T  35599917 cggaggcactcgttaacaagac 35599938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 143 - 273
Target Start/End: Complemental strand, 3683525 - 3683397
Alignment:
Q  143 ggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||| ||||||| ||| |||||||| ||||||    
T  3683525 ggtcttaaatagtaactttttatgaaaagttatgtattcaatgca-tggaaattgaactatttgaa-attttcaagaatattttcctaatttattatgct 3683428  T
Q  243 taaagagtgccccaggggcactcgttaacaa 273  Q
    |||||||||  || |||||||||||||||||    
T  3683427 taaagagtgtgccgggggcactcgttaacaa 3683397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 142 - 276
Target Start/End: Complemental strand, 34681796 - 34681663
Alignment:
Q  142 gggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgc 241  Q
    |||||||||||||||||||||||| |||| || |||||| |||||||||||||||||||||||||| |||| |||| |||||||| ||||||||| ||||    
T  34681796 gggtcttaaatagtaactttttataaaaacttgtgtatttaatgcattggaaattgaactatttgacttttgtaaaaaataatttcctaatttagaatgc 34681697  T
Q  242 ttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||| |||||| |||||||||||||| |||||    
T  34681696 ttaaagactgcccc-ggggcactcgttaagaagac 34681663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 110 - 273
Target Start/End: Complemental strand, 18926462 - 18926301
Alignment:
Q  110 atgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaat 209  Q
    |||||||| | || ||||||| |||| |||||||||| ||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| |      
T  18926462 atgttaacgattgccccggag-cactttttaagggtcataaatggtaactttttatgaaaagttgtgtattcaatgcattgaaaattgaactatttcacc 18926364  T
Q  210 tttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    |||||||||||||||||  | |||||  ||||||||||||||||| | || |||||||||||||    
T  18926363 tttttaaagaataatttcatgatttaaaatgcttaaagagtgcccta-ggacactcgttaacaa 18926301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 130 - 273
Target Start/End: Original strand, 33922728 - 33922872
Alignment:
Q  130 gacactctttaagggtcttaaatagtaac---tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||||   |||||||||||| |   ||||||| |||| |||||| |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  33922728 gacactctttaacaatcttaaatagtagcctttttttat-aaaacttatgtgttcaatgcattgaaaattgaactatttgacttttttaaagaataattt 33922826  T
Q  227 tctaatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    |||||||||| ||||||||| | ||||||  ||||||||||||||||    
T  33922827 tctaatttagaatgcttaaa-aatgccccgtgggcactcgttaacaa 33922872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 130 - 276
Target Start/End: Complemental strand, 36973454 - 36973306
Alignment:
Q  130 gacactctttaagggtcttaaatagtaacttttt-atgaaaagttatgtattcaatgcattggaaattgaactatttgaatttttt-aaagaataatttt 227  Q
    |||||||||||||||| ||||||||||| ||||| ||||||| || | |||| | |||||||||||||||| ||||||| |||||| ||||||||| ||     
T  36973454 gacactctttaagggttttaaatagtaatttttttatgaaaatttgtatatttattgcattggaaattgaattatttgattttttttaaagaataacttc 36973355  T
Q  228 ctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||| | ||||||||||||||| || | ||||||||||||||||||    
T  36973354 ctaatttggaatgcttaaagagtgcaccggaggcactcgttaacaagac 36973306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 27338321 - 27338232
Alignment:
Q  187 attggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |  |||||||| |||||||    
T  27338321 attggaaattgaactgtttgatttttttaaagaataattttctaatttagcatgcttaaagagtgccccaagaacactcgttcacaagac 27338232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 19620100 - 19619993
Alignment:
Q  138 ttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagt 237  Q
    ||||||| |||||||||||||||||||||||||||| | || ||| ||||||||||||||||   |||||  |||||||||||||||||  ||||||||     
T  19620100 ttaagggccttaaatagtaactttttatgaaaagttgtataatcagtgcattggaaattgaaaactttgacatttttaaagaataatttcttaatttagc 19620001  T
Q  238 atgcttaa 245  Q
    ||||||||    
T  19620000 atgcttaa 19619993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 276
Target Start/End: Original strand, 34299749 - 34299879
Alignment:
Q  146 cttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||||||||||||||||  || |||| ||| ||| ||| ||||||||   |||||  ||||||||||||||||   |||| ||| ||||||||    
T  34299749 cttaaatagtaactttttatgaaagtttgtgtaatcagtgctttgtaaattgaaaactttgacatttttaaagaataattgcttaatctagcatgcttaa 34299848  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    | |||||||| ||||||||||||||||||||    
T  34299849 aaagtgccccgggggcactcgttaacaagac 34299879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 254
Target Start/End: Complemental strand, 35875197 - 35875077
Alignment:
Q  134 ctctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatt 233  Q
    ||||||||| |||| || ||||||||||||||||||| ||||   |||||| ||||  || ||||||||||| | ||||||||  |||||||||||||||    
T  35875197 ctctttaagagtctcaagtagtaactttttatgaaaatttattatttcaatacattaaaagttgaactatttaacttttttaattaataattttctaatt 35875098  T
Q  234 tagtatgcttaaagagtgccc 254  Q
    ||  |||||||||||||||||    
T  35875097 tataatgcttaaagagtgccc 35875077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 274
Target Start/End: Complemental strand, 46726232 - 46726109
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagag 249  Q
    |||||||| ||||||||||||  |||||| ||||||||||| || ||| |  |||||| |||||||||||||| ||||  ||||| |||| |||||||||    
T  46726232 aatagtaaatttttatgaaaaactatgtaatcaatgcattgaaatttgtaacatttgacttttttaaagaatattttttaaatttggtatccttaaagag 46726133  T
Q  250 tgccccaggggcactcgttaacaag 274  Q
    || ||| ||||||||||||||||||    
T  46726132 tg-cccgggggcactcgttaacaag 46726109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 43996441 - 43996326
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaact-atttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccag 257  Q
    ||||||| |||| ||||| ||| ||||||||| |||||||||| |||| | || |||||||||||||||||||| ||||||||||||||||||| |||      
T  43996441 tttttataaaaatttatgcatttaatgcattgaaaattgaacttatttaacttgtttaaagaataattttctaacttagtatgcttaaagagtgtcccga 43996342  T
Q  258 gggcactcgttaacaa 273  Q
     | |||||||||||||    
T  43996341 tgacactcgttaacaa 43996326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 276
Target Start/End: Complemental strand, 28770576 - 28770447
Alignment:
Q  148 taaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagt-atgcttaa 245  Q
    |||||||||| |||||| ||||||||| |||||| |||||||||||||||| | || |||| ||||  |||||||||||  ||||||| |  ||||||||    
T  28770576 taaatagtaagtttttaatgaaaagttgtgtattgaatgcattggaaattgtaatagttgacttttcaaaagaataatta-ctaattttgggatgcttaa 28770478  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||| | ||||||||||||||||||    
T  28770477 agagtgccccggaggcactcgttaacaagac 28770447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 279
Target Start/End: Original strand, 31902716 - 31902887
Alignment:
Q  106 gaaaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactattt 205  Q
    |||||||||||| | || ||| ||| ||||||||||||   ||||||||||| |||||||| ||| || |||| |||||| |||| |||||||| |||||    
T  31902716 gaaaatgttaacgagtgcccccgag-cactctttaaggactttaaatagtaaatttttatggaaaattgtgtagtcaatgtattgaaaattgaaatattt 31902814  T
Q  206 gaattttttaaagaataattttctaatttagta-tgcttaaagagtgccccaggggcactcgttaacaagactca 279  Q
    || ||| |||| |||||| ||||| |||| | | |||||||| |||||||| ||| |||||||||||||||||||    
T  31902815 gactttcttaaggaataa-tttcttattttgaattgcttaaaaagtgcccc-gggacactcgttaacaagactca 31902887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 276
Target Start/End: Complemental strand, 27123354 - 27123244
Alignment:
Q  166 gaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactc 265  Q
    |||||||| |||| | |||||||||||||||| | || |||| ||||| ||||||| |||    ||||| | |||||||||||||||||| |||||||||    
T  27123354 gaaaagttgtgtacttaatgcattggaaattgtaatagttgactttttaaaagaatgattactaaatttgggatgcttaaagagtgccccgggggcactc 27123255  T
Q  266 gttaacaagac 276  Q
    |||||||||||    
T  27123254 gttaacaagac 27123244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 33887842 - 33887963
Alignment:
Q  129 agacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttc 228  Q
    ||||||||||||| | || |||  ||||| | |||||||||| | ||||| ||||||||||| |||||||| ||||||| ||||||||||||||||| |     
T  33887842 agacactctttaaagatcataagaagtaagtatttatgaaaa-taatgtaatcaatgcattgaaaattgaaatatttgacttttttaaagaataattatt 33887940  T
Q  229 taatttagtatgcttaaagagtg 251  Q
    || ||| | ||||||||||||||    
T  33887941 tattttggaatgcttaaagagtg 33887963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 9097716 - 9097832
Alignment:
Q  161 tttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagggg 260  Q
    ||||||||||  | |||||| | |||||||||||||||| ||||||| |||||| || ||||||| | ||  ||||||||||||||||||| |||   ||    
T  9097716 tttatgaaaatgtgtgtattaattgcattggaaattgaaatatttgattttttttaa-aataattgtttatattagtatgcttaaagagtgacccgaagg 9097814  T
Q  261 cactcgttaacaagactc 278  Q
    ||||||||||||||||||    
T  9097815 cactcgttaacaagactc 9097832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 24299137 - 24299237
Alignment:
Q  146 cttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    |||||||| ||||||||||||||||||| | || ||| ||||||||||||| ||  ||||||  ||||||| |||||||||  |||||||  ||||||||    
T  24299137 cttaaataataactttttatgaaaagttgtataatcagtgcattggaaattaaaaaatttgacatttttaaggaataatttcttaatttaacatgcttaa 24299236  T
Q  246 a 246  Q
    |    
T  24299237 a 24299237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 274
Target Start/End: Complemental strand, 35567185 - 35567088
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaag 274  Q
    |||||| |||| |||||||||| || ||||||| ||||||||| ||||||||||||||||   ||||| |||||||||||  || ||| |||||||||||    
T  35567185 tgtatttaatgtattggaaattaaaatatttgacttttttaaaaaataattttctaatttgaaatgctaaaagagtgccc--ggagcattcgttaacaag 35567088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 17157804 - 17157906
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaag-aataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    |||| ||||||||||||||||||||  |||||| |||||| | | ||||||||     ||| | ||||||||||||||||||| ||||||||||||||||    
T  17157804 tgtaatcaatgcattggaaattgaaacatttgactttttttatggaataatttctccttttggaatgcttaaagagtgccccaagggcactcgttaacaa 17157903  T
Q  274 gac 276  Q
    |||    
T  17157904 gac 17157906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 273
Target Start/End: Original strand, 22688946 - 22689082
Alignment:
Q  135 tctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaattt 234  Q
    ||||||||  ||| ||||||||| ||||||||| || || |||||| ||||||||  |||||||| |  |||| ||||||||||||||| ||  ||||||    
T  22688946 tctttaagaatctaaaatagtaattttttatgacaacttgtgtatttaatgcattaaaaattgaattgattgacttttttaaagaataaattcttaattt 22689045  T
Q  235 agtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    || ||| ||||| |||||| | ||||||| |||||||||    
T  22689046 agaatgtttaaa-agtgccac-ggggcacacgttaacaa 22689082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 39321001 - 39321095
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgcc 253  Q
    ||||||| ||||||| |||||| ||| ||||| |||||| | || |||| ||||| ||||||||||| |  ||||| ||||||||||||||||||    
T  39321001 tttttattaaaagttgtgtattgaatacattgaaaattgtaatagttgactttttaaaagaataattgttaaatttggtatgcttaaagagtgcc 39321095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 43234890 - 43234760
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| |||||| |||||||||||||||| |||| | ||||||||| | || || | ||||| |||||||||||    ||| ||| ||||||||    
T  43234890 ttaaatagtaaatttttaatgaaaagttatgtattgaatgtaatggaaattgtaatagtttattttttaaaagaataattactaaatataggatgcttaa 43234791  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    ||| || |||  | |||||||||||||||||    
T  43234790 agaatgtcccgagagcactcgttaacaagac 43234760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 276
Target Start/End: Original strand, 25176339 - 25176424
Alignment:
Q  191 gaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||  ||||||  |||| ||||||||||| |||||||||  ||| ||||||||||||| |||| || |||||||||||||    
T  25176339 gaaattgaaaaatttgacattttaaaagaataattatctaatttaacatgtttaaagagtgccctagggacattcgttaacaagac 25176424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 36061495 - 36061588
Alignment:
Q  133 actctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||| ||||| ||||||||| ||| | |||| ||||| || ||||||||||||||||||||| | | ||||||| ||||||||  ||||||||    
T  36061495 actctataaggatcttaaatattaagtctttaggaaaatttgtgtattcaatgcattggaaatagtagtatttgacttttttaataaataattt 36061588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 278
Target Start/End: Original strand, 44452048 - 44452178
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaa-tgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| |||||||||||  || |||| | || ||||||||||||||||   |||||  |||||||| |||||||   |||||||| ||| ||||    
T  44452048 ttaaatagtaattttttatgaaagtttgtgtaataaagtgcattggaaattgaaacttttgatatttttaaataataattacttaatttagaatgtttaa 44452147  T
Q  246 agagtgccccaggggcactcgttaacaagactc 278  Q
    ||||||   | ||||||||||||||||||||||    
T  44452148 agagtg--tctggggcactcgttaacaagactc 44452178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 26804026 - 26804106
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatttt 227  Q
    ||||||||||| ||||| | |||  ||||  | |||||||||||||||||||| | ||||| |||||||||||||||||||    
T  26804026 ttaaatagtaagtttttgtcaaagtttataaaatcaatgcattggaaattgaagtttttgacttttttaaagaataatttt 26804106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 35731372 - 35731280
Alignment:
Q  161 tttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgcc 253  Q
    ||||| ||||||| |||||| | |||||||||||||| | || |||| ||||| |||||||| || |  ||||| ||||||||||||||||||    
T  35731372 tttataaaaagttgtgtattaagtgcattggaaattgtaatagttgactttttaaaagaatagttgttaaatttggtatgcttaaagagtgcc 35731280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 8920722 - 8920789
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||| |||||||||||||| ||||||||||||||||||||  |||||| |||| ||  |||||||||    
T  8920722 tttttttgaaaagttatgtaatcaatgcattggaaattgaaacatttgacttttctatggaataattt 8920789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 40722468 - 40722337
Alignment:
Q  137 tttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttag 236  Q
    |||||| || ||||||||||| ||||||||  || || |||| | ||||||||| |||||||| ||||||| ||| ||||||||||| ||  || || ||    
T  40722468 tttaagagttttaaatagtaagtttttatggtaatttgtgtaattaatgcattgaaaattgaaatatttgactttcttaaagaataaattcttatttcag 40722369  T
Q  237 tatgcttaaagagtgccccaggggcactcgtt 268  Q
      |||||||| |||||  | ||||||||||||    
T  40722368 attgcttaaaaagtgcatcgggggcactcgtt 40722337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 27766776 - 27766822
Alignment:
Q  230 aatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||| |||||||||||||||||  ||||||||||||||||||||    
T  27766776 aatttagaatgcttaaagagtgccctgggggcactcgttaacaagac 27766822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 40089347 - 40089272
Alignment:
Q  173 tatgtattcaatgcattggaaattgaactatttgaattt-tttaaagaataattttctaatttagtatgcttaaagagtg 251  Q
    ||||||||||||||||| ||||||    ||||||| ||| ||| || |||||||||||||||| ||||||||||||||||    
T  40089347 tatgtattcaatgcattagaaatt----tatttgactttcttttaaaaataattttctaatttggtatgcttaaagagtg 40089272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 275
Target Start/End: Original strand, 43224093 - 43224221
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa-tttagtatgctta 244  Q
    |||||||| || |||||| ||||||||| ||||||  || |||||||||||| |  | |||| ||||| ||||||||| | ||||| ||||| |||||||    
T  43224093 ttaaatagcaagtttttaatgaaaagttgtgtattacatacattggaaattgtaacagttgactttttaaaagaataa-tatctaattttaggatgctta 43224191  T
Q  245 aagagtgccccaggggcactcgttaacaaga 275  Q
    ||||||| ||| |||||| ||||||||||||    
T  43224192 aagagtg-cccgggggcattcgttaacaaga 43224221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 2347530 - 2347390
Alignment:
Q  133 actctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttct-aa 231  Q
    ||||||||||   ||| |||||||| ||||||| |||| ||||||| ||||||||||| || ||| | ||||||| |||||| | |||| |||| || ||    
T  2347530 actctttaagcacctttaatagtaaatttttattaaaatttatgtaatcaatgcattgaaatttgtaatatttgatttttttgaggaat-atttactaaa 2347432  T
Q  232 tttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    ||| | || ||| ||||||  || ||||||||||||||||||    
T  2347431 tttggaatcctttaagagtatcctaggggcactcgttaacaa 2347390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 6775330 - 6775201
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||||||| | |||||| ||| || || ||||||||||| ||||||| || || |   |||||| ||||||||||||  ||||| || |  ||||||    
T  6775330 ttaaatagtaaatatttatggaaaattgtgcattcaatgcatcggaaattcaaatagtgagatttttcaaagaataatttattaattgagaaaccttaaa 6775231  T
Q  247 gagtgccccaggggcactcgttaacaagac 276  Q
    |||||||| | || ||||| ||||||||||    
T  6775230 gagtgccctaaggacactccttaacaagac 6775201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 276
Target Start/End: Original strand, 10031929 - 10032057
Alignment:
Q  148 taaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagta-tgcttaaa 246  Q
    |||||||||  | ||||||||||  | |||| |||||||||||||||| |||  |||| | ||||| ||| |||||||  ||||||| | | ||||||||    
T  10031929 taaatagtatgtatttatgaaaaagtgtgtaatcaatgcattggaaatcgaaacatttaactttttaaaaaaataatta-ctaattttggaatgcttaaa 10032027  T
Q  247 gagtgccccaggggcactcgttaacaagac 276  Q
    ||||| ||| ||||||||||||||| ||||    
T  10032028 gagtgtcccgggggcactcgttaacgagac 10032057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 17883320 - 17883449
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||||||| ||||| | |||| ||||| | ||||||| ||||||||| || | ||||| ||||||||| ||||||||  | ||| |  || ||||||    
T  17883320 ttaaatagtaagtttttgtcaaaatttatgaaatcaatgcgttggaaattaaagtttttgacttttttaaaaaataatttctttattaaaaatccttaaa 17883419  T
Q  247 gagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||   || ||||||||||| ||||    
T  17883420 gagtgcccttaggacactcgttaactagac 17883449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 47507709 - 47507580
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    |||||| ||||||| | |||||||  | |||| ||||| ||| |||||||||| | ||||| ||||||| | ||| ||||  |  ||||| || ||||||    
T  47507709 ttaaatggtaacttctcatgaaaaaatgtgtaatcaatacatcggaaattgaaatctttgatttttttataaaattatttcttcttttagaatccttaaa 47507610  T
Q  247 gagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||| | | ||||||||||||||||    
T  47507609 gagtgccccggagacactcgttaacaagac 47507580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 8238050 - 8237950
Alignment:
Q  146 cttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||| ||||||||||||||||  || |||| ||| ||||||| ||| ||||   |||||  ||||||||||||||||   ||||||||||| |||||    
T  8238050 cttaaatggtaactttttatgaaagtttgtgtaatcagtgcattgaaaaatgaaaactttgacatttttaaagaataattacttaatttagtatacttaa 8237951  T
Q  246 a 246  Q
    |    
T  8237950 a 8237950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 32490757 - 32490801
Alignment:
Q  182 aatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||    
T  32490757 aatgcattggaaattgaattatttaaattttttacagaataattt 32490801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 276
Target Start/End: Complemental strand, 5907841 - 5907795
Alignment:
Q  229 taatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||| ||||||||||||||||| | |||||||||||||||||||    
T  5907841 taatttagaatgcttaaagagtgcccta-gggcactcgttaacaagac 5907795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 26402789 - 26402868
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||| ||||| | |||| ||||| | |||||| |||| |||||||| | ||||| |||||||| |||||||||    
T  26402789 ttaaatagtaagtttttgtcaaaatttatgaaatcaatgtattgaaaattgaagtttttgacttttttaaggaataattt 26402868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 47754509 - 47754478
Alignment:
Q  241 cttaaagagtgccccaggggcactcgttaaca 272  Q
    ||||||||||||||||||||||||||||||||    
T  47754509 cttaaagagtgccccaggggcactcgttaaca 47754478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 3692964 - 3692898
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    |||||||||||| || |||||| | |||||||||||||| | || |||| ||||| |||||||||||    
T  3692964 tttttatgaaaaattgtgtattgagtgcattggaaattgtaatagttgattttttaaaagaataatt 3692898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 27337784 - 27337718
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    ||||||||||||||| |||||| |||| |||| ||| || | || |||| |||||||||||||||||    
T  27337784 tttttatgaaaagttgtgtatttaatgtattgtaaactgtaatagttgatttttttaaagaataatt 27337718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 30626119 - 30626208
Alignment:
Q  187 attggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagact 277  Q
    ||||||||||||| || || | |||||| |||||||||||  | ||| || ||||||||||||||  || || ||||||||||||||||||    
T  30626119 attggaaattgaagtacttaattttttttaagaataatttattcattaagaatgcttaaagagtgttcc-ggagcactcgttaacaagact 30626208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 271
Target Start/End: Original strand, 42911164 - 42911194
Alignment:
Q  241 cttaaagagtgccccaggggcactcgttaac 271  Q
    |||||||||||||||||||||||||||||||    
T  42911164 cttaaagagtgccccaggggcactcgttaac 42911194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 46095595 - 46095565
Alignment:
Q  35 atttcacttttcaatacaatattaattaatt 65  Q
    |||||||||||||||||||||||||||||||    
T  46095595 atttcacttttcaatacaatattaattaatt 46095565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 273
Target Start/End: Original strand, 47405237 - 47405363
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||||||| ||||| | |||  ||||| | |||||||||| ||||||||| | |||||  ||||||| |||||||||  | |||  | || ||||||    
T  47405237 ttaaatagtaagtttttgtcaaagtttatgaaatcaatgcattagaaattgaagtttttgacctttttaatgaataatttatttattaggaatccttaaa 47405336  T
Q  247 gagtgccccaggggcactcgttaacaa 273  Q
    ||||||||    |||||||||||||||    
T  47405337 gagtgccctcaaggcactcgttaacaa 47405363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 20397459 - 20397528
Alignment:
Q  130 gacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaa 199  Q
    |||||||||||||| | | |||||||||  |||||||||||  | || ||||||||||||| ||||||||    
T  20397459 gacactctttaaggatttaaaatagtaatattttatgaaaatgtgtgcattcaatgcattgaaaattgaa 20397528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 272
Target Start/End: Original strand, 27123377 - 27123410
Alignment:
Q  239 tgcttaaagagtgccccaggggcactcgttaaca 272  Q
    ||||||||||||||||| ||||||||||||||||    
T  27123377 tgcttaaagagtgccccgggggcactcgttaaca 27123410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 28324183 - 28324244
Alignment:
Q  218 gaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactca 279  Q
    |||||||||| |||||| | || |||||||||||||| | || ||||||||||| |||||||    
T  28324183 gaataattttttaatttggaatccttaaagagtgccctaaggacactcgttaacgagactca 28324244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 226
Target Start/End: Original strand, 37352377 - 37352497
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaacttt--ttatgaaaagttatgtattcaatgcattggaaattgaactattt 205  Q
    |||||||||| | |||||| ||| |||||||||||    ||||||||| | |||  || |||||| || |||| | |||||||||||||||||| |||||    
T  37352377 aaatgttaacgagtgtccctgaggcactctttaagacatttaaatagtcattttctttttgaaaatttgtgtaattaatgcattggaaattgaaatattt 37352476  T
Q  206 gaattttttaaagaataattt 226  Q
    || ||||| |  |||||||||    
T  37352477 gactttttaatggaataattt 37352497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 40998374 - 40998431
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcatt 189  Q
    ||||||||||| ||||  ||||||||||||||||||||| || |||||| ||| ||||    
T  40998374 cactctttaagagtctagaatagtaactttttatgaaaatttgtgtatttaatacatt 40998431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 272
Target Start/End: Original strand, 44537444 - 44537477
Alignment:
Q  239 tgcttaaagagtgccccaggggcactcgttaaca 272  Q
    ||||||||||||||||| ||||||||||||||||    
T  44537444 tgcttaaagagtgccccgggggcactcgttaaca 44537477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 6387995 - 6388039
Alignment:
Q  182 aatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    |||| ||||||||||||| | ||||| ||||||||||||||||||    
T  6387995 aatgtattggaaattgaagtttttgacttttttaaagaataattt 6388039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 22610697 - 22610759
Alignment:
Q  35 atttcacttttcaatacaatattaattaattatcttttttcaattatacatcttaattaatacta 99  Q
    |||| ||||||||| ||||||||||||| || | ||||||||||||||| || ||||||||||||    
T  22610697 attttacttttcaaaacaatattaattactt-ttttttttcaattatacttc-taattaatacta 22610759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 34398095 - 34398159
Alignment:
Q  160 ttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataat 224  Q
    |||||| |||| || ||| |||||||||||| |||||||| |||||||  |||||||| ||||||    
T  34398095 ttttataaaaatttgtgttttcaatgcattgaaaattgaagtatttgacctttttaaaaaataat 34398159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 108 - 276
Target Start/End: Original strand, 49532220 - 49532386
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttga 207  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| || ||||  | |||||| |||||||||||||||||| ||||||     
T  49532220 aaatgttaacgaatgtcccg-agacactctttaagggccttaaatagtaacttttaataaaaacatgtgtatttaatgcattggaaattgaattatttg- 49532317  T
Q  208 attttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||| |||||||||||||  |||||| | ||||||| |||||| ||| ||||||||||||||||||||    
T  49532318 attttataaagaataatttcttaatttggaatgcttacagagtgtcccgggggcactcgttaacaagac 49532386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 19597141 - 19597261
Alignment:
Q  131 acactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttcta 230  Q
    ||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||| |||||||||||||||||  ||||||||||||||||| |||    
T  19597141 acactctttaagggtcttaaataataacattttataaaaatttatgtattcaatgcattagaaattgaactatttgacatttttaaagaataatttccta 19597240  T
Q  231 atttagtatgcttaaagagtg 251  Q
    || ||| ||||||||| ||||    
T  19597241 atgtagaatgcttaaaaagtg 19597261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 132 - 281
Target Start/End: Complemental strand, 2063589 - 2063441
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa 231  Q
    ||||||||||| | ||  ||||||||||||||||||||| || |||||| ||| |||||||||||||||| ||||| ||||||||||||||| || ||||    
T  2063589 cactctttaagagcctagaatagtaactttttatgaaaatttgtgtatttaatacattggaaattgaactgtttgacttttttaaagaataacttcctaa 2063490  T
Q  232 tttagtatgcttaaagagtgccccaggggcactcgttaacaagactcata 281  Q
    ||||| ||||||||||||||  || || ||||||||||||||||| ||||    
T  2063489 tttagcatgcttaaagagtg-tccgggagcactcgttaacaagacccata 2063441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 137 - 276
Target Start/End: Original strand, 30978640 - 30978784
Alignment:
Q  137 tttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgca-----ttggaaattgaactatttgaattttttaaagaataattttctaa 231  Q
    ||||||||||| || |||||||||||||||||||||| |||||||||  ||     |||||||||||||||||||| ||||||||  ||| ||||  |||    
T  30978640 tttaagggtctaaagtagtaactttttatgaaaagttgtgtattcaactcaacgccttggaaattgaactatttgacttttttaataaatcatttcttaa 30978739  T
Q  232 tttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||| | |||||||||||||||||||||||||||| ||||||||||    
T  30978740 tttggaatgcttaaagagtgccccaggggcactccttaacaagac 30978784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 275
Target Start/End: Complemental strand, 48098060 - 48097923
Alignment:
Q  138 ttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagt 237  Q
    |||||| ||||||||||||||||||||| ||||  | |||||| |||| ||||||||||||||||||| | ||||||||||||||||||  ||||||||     
T  48098060 ttaaggttcttaaatagtaactttttataaaaacatgtgtatttaatgtattggaaattgaactatttaacttttttaaagaataatttcttaatttaga 48097961  T
Q  238 atgcttaaagagtgccccaggggcactcgttaacaaga 275  Q
    || |||||| ||||| || | | |||||||||||||||    
T  48097960 atacttaaaaagtgctccggagacactcgttaacaaga 48097923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 276
Target Start/End: Original strand, 24546718 - 24546843
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagag 249  Q
    |||||||| |||||||||||| || |||||| ||| ||||||||||||||||  ||||||||||||||||||||||| ||||||||  ||||||||||||    
T  24546718 aatagtaattttttatgaaaatttgtgtatttaatacattggaaattgaactgcttgaattttttaaagaataatttcctaatttaacatgcttaaagag 24546817  T
Q  250 tgccccaggggcactcgttaacaagac 276  Q
    ||  | | | |||||||||||||||||    
T  24546818 tgttcta-gagcactcgttaacaagac 24546843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 53737829 - 53737932
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaag 274  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||  || ||| | | |||||||||||||||  ||||||||||||| ||||    
T  53737829 tgtattcaatgcattggaaatcgaaatatttgaattttttaaagaataatttcttattttggaacgcttaaagagtgccctgggggcactcgttagcaag 53737928  T
Q  275 actc 278  Q
    ||||    
T  53737929 actc 53737932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 273
Target Start/End: Complemental strand, 53261657 - 53261531
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||||||||||||||| |||  || |||| ||| ||||||||||||||||   ||| || ||||||||||||||||   |||||||| |||||||||    
T  53261657 ttaaatagtaactttttataaaagtttgtgtaatcactgcattggaaattgaaaacttttaaatttttaaagaataattacttaatttagcatgcttaaa 53261558  T
Q  247 gagtgccccaggggcactcgttaacaa 273  Q
    ||||| ||  |||||||||||||||||    
T  53261557 gagtgtcctgggggcactcgttaacaa 53261531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 1696156 - 1696272
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttga 207  Q
    |||||||||| | |||||| |||||||||||||||  | ||||||||||||||||| ||||||  |||||| ||||||||| |||||||||| ||||||     
T  1696156 aaatgttaaccagtgtccccgagacactctttaagacttttaaatagtaactttttttgaaaatgtatgtaatcaatgcatcggaaattgaaatatttgt 1696255  T
Q  208 attttttaaagaataat 224  Q
     |||||||  |||||||    
T  1696256 cttttttatggaataat 1696272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 276
Target Start/End: Original strand, 23016255 - 23016358
Alignment:
Q  173 tatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaaca 272  Q
    ||||||||||||||||||||||||||| | ||||| || |||||| ||||||||  |||||| | ||||| |||||||||||| ||||| ||||||| ||    
T  23016255 tatgtattcaatgcattggaaattgaaatgtttgacttctttaaataataatttcttaatttggaatgctcaaagagtgccccgggggcgctcgttagca 23016354  T
Q  273 agac 276  Q
    ||||    
T  23016355 agac 23016358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 8297971 - 8297841
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| |||||| |||||| || |||||| |||||||||||||||| |  | ||||  |||| |||||||||||    ||||| | ||||||||    
T  8297971 ttaaatagtaagtttttaatgaaaaattgtgtattgaatgcattggaaattgtaacagttgacattttaaaagaataattactaaatttgggatgcttaa 8297872  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||| ||||||||||||||||||||    
T  8297871 agagtgccccgggggcactcgttaacaagac 8297841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 275
Target Start/End: Original strand, 41956423 - 41956565
Alignment:
Q  133 actctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaat 232  Q
    ||||||||||||  || |||||||| |||||||||||| || |||| ||||||| ||| |||||||| ||||| ||||| |||||||||| |||  || |    
T  41956423 actctttaagggcttttaatagtaaatttttatgaaaaattgtgtaatcaatgcgttgaaaattgaaatatttaaatttcttaaagaatactttcttatt 41956522  T
Q  233 ttagtatgcttaaagagtgccccaggggcactcgttaacaaga 275  Q
    || |  ||||||||||||| ||  |||||||||||||| ||||    
T  41956523 ttggattgcttaaagagtgtcctgggggcactcgttaataaga 41956565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 45743454 - 45743326
Alignment:
Q  106 gaaaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactattt 205  Q
    |||||||||||||| |||| ||| | ||||  |||||||||||||||||||||| ||||||||||||| |||| ||| || |||| ||||||||   |||    
T  45743454 gaaaatgttaactagtgtctcggtg-cactggttaagggtcttaaatagtaactctttatgaaaagttgtgtaatcactgtattgaaaattgaaaacttt 45743356  T
Q  206 gaattttttaaagaataattttctaattta 235  Q
    ||  |||||||||||||||||  |||||||    
T  45743355 gacatttttaaagaataatttcttaattta 45743326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 45900172 - 45900285
Alignment:
Q  163 tatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggca 262  Q
    ||||||||||| |||||| ||||||||||||||||   || |||| ||| | |||||||||||    ||||||| |||||||||||||||| | ||||||    
T  45900172 tatgaaaagttgtgtattgaatgcattggaaattgtgatagttgactttataaaagaataattgctaaatttaggatgcttaaagagtgcctcgggggca 45900271  T
Q  263 ctcgttaacaagac 276  Q
    ||||||||||||||    
T  45900272 ctcgttaacaagac 45900285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 276
Target Start/End: Complemental strand, 51835053 - 51834884
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttg 206  Q
    |||||||||| | ||| || ||||||||||||||     ||||||||||| |||||| ||||||||| |||||| |||||||||||||||  | || |||    
T  51835053 aaatgttaacgagtgttcccgagacactctttaaacactttaaatagtaaatttttaatgaaaagttgtgtatttaatgcattggaaattataatagttg 51834954  T
Q  207 aattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    | ||||| |||||||||||    ||||||| |||||||||||||| ||| |||  |||| ||||||||||    
T  51834953 actttttaaaagaataattgctaaatttaggatgcttaaagagtgtcccggggaaactcattaacaagac 51834884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 276
Target Start/End: Original strand, 52650693 - 52650826
Alignment:
Q  143 ggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgct 242  Q
    ||||||||||||||| |||||||||||| || |||| ||| || |||| ||||||||   |||||  ||| |||||||||||||  |||||||| ||| |    
T  52650693 ggtcttaaatagtaattttttatgaaaaattgtgtaatcagtgaattgaaaattgaaaattttgacatttgtaaagaataatttcttaatttagcatgtt 52650792  T
Q  243 taaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||  || | ||||||||||||||||||    
T  52650793 taaagagtgttccggaggcactcgttaacaagac 52650826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 132 - 275
Target Start/End: Complemental strand, 41462164 - 41462020
Alignment:
Q  132 cactctttaagggtcttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttcta 230  Q
    |||||||||||  | ||||||||||| |||||| |||||| ||||||||| |||||||  ||||||| | || |||| ||||| |||||||||||    |    
T  41462164 cactctttaagcattttaaatagtaagtttttaatgaaaaattatgtattaaatgcataagaaattgtaatagttgactttttaaaagaataattactaa 41462065  T
Q  231 atttagtatgcttaaagagtgccccaggggcactcgttaacaaga 275  Q
    || ||  ||||||||||||||| |||||| |||||||||||||||    
T  41462064 atataaaatgcttaaagagtgctccagggacactcgttaacaaga 41462020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 39275030 - 39274933
Alignment:
Q  177 tattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaaga 275  Q
    ||||||||||||||||||||||| ||||||| ||||| ||| ||||||| | || ||| | ||||||||| |||||||| |||||||||||||| ||||    
T  39275030 tattcaatgcattggaaattgaaatatttgattttttaaaaaaataattgtttacttttgaatgcttaaatagtgcccc-ggggcactcgttaataaga 39274933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 50086429 - 50086543
Alignment:
Q  161 tttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagggg 260  Q
    ||||||||||  | |||||||||||||||| ||||  || ||||||| ||||||||||||||||| | || ||| | ||| |||||||||  ||| ||||    
T  50086429 tttatgaaaatatgtgtattcaatgcattgaaaatcaaaatatttgatttttttaaagaataattgtttattttggaatgtttaaagagtttccc-gggg 50086527  T
Q  261 cactcgttaacaagac 276  Q
    ||||||||||||||||    
T  50086528 cactcgttaacaagac 50086543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 250
Target Start/End: Original strand, 47995702 - 47995847
Alignment:
Q  106 gaaaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatt 204  Q
    |||||||||||| | |||||| ||||| |||||||||    |||||| |||| |||||| |||||||||||||||| ||||||||| |||||| | || |    
T  47995702 gaaaatgttaacaagtgtccctgagactctctttaagcactttaaattgtaagtttttaatgaaaagttatgtattgaatgcattgaaaattgtaataat 47995801  T
Q  205 tgaattttttaaagaataattttctaatttagtatgcttaaagagt 250  Q
    | | ||||| ||||| |||||    ||||||| |||||||||||||    
T  47995802 taactttttaaaagagtaattactaaatttagaatgcttaaagagt 47995847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 280
Target Start/End: Complemental strand, 24369465 - 24369374
Alignment:
Q  188 ttggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactcat 280  Q
    |||||||||||| | ||||| |||| |||||||||||| | || ||||||||| |||||||||| | | ||||||||| ||||||||||||||    
T  24369465 ttggaaattgaaatgtttgacttttataaagaataattgtttattttagtatgtttaaagagtg-ctcgggggcactctttaacaagactcat 24369374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 9044343 - 9044232
Alignment:
Q  137 tttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttag 236  Q
    ||||||||||| |  | ||||||||||   |||| || |||||||||||| ||| |||||||||||||||| |||| |||  |||||||||||||||||     
T  9044343 tttaagggtctcaggttgtaacttttttaaaaaacttgtgtattcaatgctttgcaaattgaactatttgacttttctaataaataattttctaatttaa 9044244  T
Q  237 tatgcttaaaga 248  Q
     ||| |||||||    
T  9044243 aatgtttaaaga 9044232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 276
Target Start/End: Original strand, 41370178 - 41370304
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagag 249  Q
    |||||||| |||||||||||| || |||| ||||||||||| |||||||| ||||| | |||||| |  ||||||||  |||||| |  ||||||| |||    
T  41370178 aatagtaagtttttatgaaaatttgtgtaatcaatgcattgaaaattgaaatatttaacttttttgagaaataatttcttaatttggattgcttaatgag 41370277  T
Q  250 tgccccaggggcactcgttaacaagac 276  Q
    ||| || |   ||||||||||||||||    
T  41370278 tgctccggaaacactcgttaacaagac 41370304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 52014658 - 52014584
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatt 233  Q
    |||||||||||| || |||||  |||||||||||||||| | ||||||| |||||||| ||||||||| ||||||    
T  52014658 tttttatgaaaatttgtgtatctaatgcattggaaattggattatttgacttttttaatgaataatttcctaatt 52014584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 7852550 - 7852655
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| |||||| ||||||||| |||||| ||||||||| |||||| | || || | ||||| |||||||||||    ||||||| ||||||||    
T  7852550 ttaaatagtaagtttttaatgaaaagttgtgtattaaatgcattgaaaattgtaatagttaattttttaaaagaataattactaaatttaggatgcttaa 7852649  T
Q  246 agagtg 251  Q
    ||||||    
T  7852650 agagtg 7852655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 49795160 - 49795115
Alignment:
Q  231 atttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  49795160 atttagtatgcttaaagagtgcccccagggcactcgttaacaagac 49795115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 2818423 - 2818355
Alignment:
Q  182 aatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagt 250  Q
    |||||||||||||||||||| |||||  |||| ||||||||||||  |||||||  |||||||||||||    
T  2818423 aatgcattggaaattgaactttttgaccttttaaaagaataatttcttaatttaaaatgcttaaagagt 2818355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 276
Target Start/End: Original strand, 13800706 - 13800830
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttct-aatttagtatgcttaaaga 248  Q
    |||||||||||| ||||||||  | |||| |||||| || |||| ||| | ||||||| ||||||||||||| ||||||| ||||||| || ||||||||    
T  13800706 aatagtaactttctatgaaaaactgtgtaatcaatgtataggaatttgtaatatttgacttttttaaagaat-attttctaaatttaggatccttaaaga 13800804  T
Q  249 gtgccccaggggcactcgttaacaagac 276  Q
    |||     ||||||||||||||||||||    
T  13800805 gtg--ttgggggcactcgttaacaagac 13800830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 273
Target Start/End: Original strand, 39727579 - 39727686
Alignment:
Q  165 tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcact 264  Q
    |||||| ||||||| |||||||||  ||||||||| ||||||| ||||| | ||||||||||  |  ||||| || ||||||| ||||||||||  ||||    
T  39727579 tgaaaatttatgtaatcaatgcatcagaaattgaaatatttgacttttt-atagaataatttattcttttagaatccttaaagtgtgccccaggaacact 39727677  T
Q  265 cgttaacaa 273  Q
    |||||||||    
T  39727678 cgttaacaa 39727686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 281
Target Start/End: Complemental strand, 28695865 - 28695731
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagta-tgcttaa 245  Q
    ||||||||||| ||||| | |||  ||||| | | ||| |||||||||||||| | ||||| ||||||||| ||||||||  | ||| |||| | |||||    
T  28695865 ttaaatagtaaatttttgtcaaagtttatgaaattaatacattggaaattgaagtttttgacttttttaaaaaataatttctttatt-agtaatccttaa 28695767  T
Q  246 agagtgccccaggggcactcgttaacaagactcata 281  Q
    |||||||||   ||||||||||||||||||| ||||    
T  28695766 agagtgcccttagggcactcgttaacaagacccata 28695731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 31429359 - 31429296
Alignment:
Q  164 atgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatttt 227  Q
    |||||||||| |||||| |||||||||||||||| | || |||| ||||| |||||||||||||    
T  31429359 atgaaaagttgtgtattgaatgcattggaaattgtaatagttgattttttaaaagaataatttt 31429296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 281
Target Start/End: Original strand, 40480177 - 40480311
Alignment:
Q  147 ttaaatagtaactttttatgaaaagtt-atgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| ||||| | ||||||| ||||| |||||| || || ||||||| ||||||| |||||||    |||||||  |  ||||| || |||||    
T  40480177 ttaaatagtaagttttt-taaaaagtttatgtaatcaatgtatcgggaattgaaatatttgacttttttatgacataatttcttcttttagcatccttaa 40480275  T
Q  246 agagtgccccaggggcactcgttaacaagactcata 281  Q
    |||||| ||||| |||||||||| ||||||||||||    
T  40480276 agagtgtcccagaggcactcgtttacaagactcata 40480311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 46088523 - 46088602
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||| ||||| | |||  ||||| | |||||||||||||||||||| | ||||| |||||||| |||||||||    
T  46088523 ttaaatagtaagtttttgtcaaagtttatgaaatcaatgcattggaaattgaagtttttgatttttttaaggaataattt 46088602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 25115270 - 25115320
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattg 197  Q
    ||||||||||| ||||||| ||||||| |||||||| ||||||||||||||    
T  25115270 ttaaatagtaagtttttataaaaagttgtgtattcactgcattggaaattg 25115320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 31072505 - 31072606
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa-tttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    |||| ||||||||| |||| ||| |  |||||| ||||| |||||||| |||||||| ||||  || ||||||||||| ||| |||||||||||||||||    
T  31072505 tgtaatcaatgcataggaatttgtaacatttgactttttcaaagaata-ttttctaaatttatgatccttaaagagtggcccgggggcactcgttaacaa 31072603  T
Q  274 gac 276  Q
    |||    
T  31072604 gac 31072606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 31690482 - 31690353
Alignment:
Q  147 ttaaatagtaacttt-ttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||| |||||| |  | ||| | |||||||| |||||||    ||||| | ||  ||||    
T  31690482 ttaaatagtaaatttcttatgaaaagttgtgtattcaatgcattgaaaattgcaacagttg-actttttaaataataattaataaatttggaatcgttaa 31690384  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    |||||| ||| ||||| ||||||||||||||    
T  31690383 agagtgtcccgggggcgctcgttaacaagac 31690353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 19652728 - 19652675
Alignment:
Q  151 atagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatt 204  Q
    ||||||| |||||||||||| || || ||||||||||||||||||| |||||||    
T  19652728 atagtaagtttttatgaaaatttgtgcattcaatgcattggaaattaaactatt 19652675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 38949051 - 38949152
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa 231  Q
    ||||||||||||   | ||||||||| |||||||||||| || || ||||||||||| |||||||||| | ||  | ||||||||  ||||||||| |||    
T  38949051 cactctttaaggacttgaaatagtaaatttttatgaaaaattgtgcattcaatgcatcggaaattgaagtgttaaatttttttaagaaataattttttaa 38949150  T
Q  232 tt 233  Q
    ||    
T  38949151 tt 38949152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 276
Target Start/End: Complemental strand, 49400699 - 49400583
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagg 258  Q
    |||| |||||||||  |||||| ||| |||||||||||| | || |||| ||||| |||||||||||    ||||||| ||||||||| |||| | | ||    
T  49400699 ttttaatgaaaagtcgtgtattaaatacattggaaattgtaatagttgattttttaaaagaataattactaaatttaggatgcttaaatagtg-ctctgg 49400601  T
Q  259 ggcactcgttaacaagac 276  Q
     |||||||||||||||||    
T  49400600 agcactcgttaacaagac 49400583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 7628051 - 7627979
Alignment:
Q  154 gtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    |||||||||| ||||||||||||||  ||||| |||||||||||||  |||||| |||| ||  |||||||||    
T  7628051 gtaactttttttgaaaagttatgtaaccaatgtattggaaattgaaacatttgacttttctatggaataattt 7627979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 21240705 - 21240637
Alignment:
Q  210 tttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactc 278  Q
    |||||||| ||||||||  |||||||| ||| ||||||| |||||| || ||| |||||||||||||||    
T  21240705 tttttaaataataatttcttaatttagcatgtttaaagaatgccccgggagcattcgttaacaagactc 21240637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 31415090 - 31415138
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattggaaattga 198  Q
    |||| ||||||||||| |||| ||||||||||||| |||||||||||||    
T  31415090 aataataactttttataaaaacttatgtattcaatacattggaaattga 31415138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 31655540 - 31655472
Alignment:
Q  209 ttttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagact 277  Q
    ||||||||||||||||||| |||||  | |  |||||| ||||||| | ||||||||||||||||||||    
T  31655540 ttttttaaagaataattttttaattgggaaaccttaaaaagtgccctaagggcactcgttaacaagact 31655472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 32323812 - 32323852
Alignment:
Q  238 atgcttaaagagtgccccaggggcactcgttaacaagactc 278  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  32323812 atgcttaaagagtgccccaggggaattcgttaacaagactc 32323852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 38160305 - 38160256
Alignment:
Q  31 atcaatttcacttttcaatacaatattaattaattatcttttttcaattata 82  Q
    ||||||||||||||||||||||||||||||||  | | ||||||||||||||    
T  38160305 atcaatttcacttttcaatacaatattaatta--ttttttttttcaattata 38160256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 48316020 - 48315948
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaata 222  Q
    |||| ||| ||||||||||||||| |||| ||||||||||| || ||| |  |||||| ||||||||||||||    
T  48316020 aatattaagtttttatgaaaagttgtgtaatcaatgcattgaaatttgtaacatttgacttttttaaagaata 48315948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 54543657 - 54543617
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaa 199  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  54543657 tttttttgaaaagttatgtaatcaatgcattggaaattgaa 54543617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 54552816 - 54552879
Alignment:
Q  210 tttttaaagaataattttct-aatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    |||||||||||| ||||||| ||||||| || ||||||||||||||| | |||||||||||||||    
T  54552816 tttttaaagaat-attttctaaatttaggattcttaaagagtgccccggaggcactcgttaacaa 54552879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 5047303 - 5047224
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||| ||||| | |||  ||||| | |||||||||||||||||||| | ||||| |||| ||| |||||||||    
T  5047303 ttaaatagtaagttttttttaaagtttatgaaatcaatgcattggaaattgaaatttttgacttttgtaatgaataattt 5047224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 8261208 - 8261157
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattg 197  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||| ||||||    
T  8261208 ttaaatagtaagtttttaatgaaaagttatgtattaaatgcattgaaaattg 8261157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 8274625 - 8274574
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattg 197  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||| ||||||    
T  8274625 ttaaatagtaagtttttaatgaaaagttatgtattaaatgcattgaaaattg 8274574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 14603735 - 14603830
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatttt 227  Q
    ||||||||||||  ||| |||||| |  ||||||||||  || ||||||||| |||||| || ||| | ||||||||||||||||| |||| ||||    
T  14603735 cactctttaaggacctttaatagtgagattttatgaaagtttgtgtattcaacgcattgaaacttgtaatatttgaattttttaaaaaatattttt 14603830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 18089705 - 18089650
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaatttttt 214  Q
    ||||| |||||| ||||||| | |||||||||||||||||| ||||||| ||||||    
T  18089705 tttttttgaaaaattatgtaataaatgcattggaaattgaaatatttgactttttt 18089650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 25751708 - 25751787
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||| ||||||| |||  ||||| | | ||||||||| ||||| || | ||||| ||||||||||||||||||    
T  25751708 ttaaatagtaagtttttattaaagcttatgcaattaatgcattgaaaattaaattttttgacttttttaaagaataattt 25751787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 30161354 - 30161433
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||| ||||| | |||  ||||| | ||||||||||| |||||| | | ||||| ||||||||||||||||||    
T  30161354 ttaaatagtaagtttttgttaaagtttatgaaatcaatgcattgtaaattggagtttttgacttttttaaagaataattt 30161433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 32055374 - 32055476
Alignment:
Q  174 atgtattcaatgcattggaaattgaac-tatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaaca 272  Q
    ||||| |||||||||||||||| |||  | ||||| |||| ||||||||||||   |  ||| |||||||||||||||| ||| ||||||||||| ||||    
T  32055374 atgtaatcaatgcattggaaatcgaaaatgtttgacttttctaaagaataattgcttgtttttgtatgcttaaagagtg-cccgggggcactcgtcaaca 32055472  T
Q  273 agac 276  Q
    ||||    
T  32055473 agac 32055476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 36721593 - 36721660
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaatttttt 214  Q
    ||||||||||| |||||||| ||| || |||| |||||||||||  ||||||| ||||||| ||||||    
T  36721593 ttaaatagtaagtttttatggaaatttgtgtaatcaatgcattgagaattgaaatatttgactttttt 36721660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 39279259 - 39279212
Alignment:
Q  179 ttcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    |||||||||||||||||||||  |||||| |||||||| |||||||||    
T  39279259 ttcaatgcattggaaattgaagaatttgacttttttaaggaataattt 39279212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 281
Target Start/End: Original strand, 44646535 - 44646666
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagag 249  Q
    ||||||||||| | |||||||  | |||| ||||||||| |||||| ||| ||||||| ||| ||| | |||| |||  |  |||   || ||||||||     
T  44646535 aatagtaacttatcatgaaaatatgtgtaatcaatgcatcggaaatcgaaatatttgactttattataaaatagtttcttcttttgaaatccttaaagaa 44646634  T
Q  250 tgccccaggggcactcgttaacaagactcata 281  Q
    |||||| |||||||||||||||||||| ||||    
T  44646635 tgccccgggggcactcgttaacaagacccata 44646666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 273
Target Start/End: Original strand, 50341891 - 50341998
Alignment:
Q  164 atgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcac 263  Q
    |||||||||| |||||| ||||| |||||||||| | || |||| ||||| |||||||||||    ||||| | ||||||| | ||||||||  || |||    
T  50341891 atgaaaagttgtgtattgaatgcgttggaaattgtaatagttgactttttaaaagaataattactaaatttggaatgcttacaaagtgcccc--ggacac 50341988  T
Q  264 tcgttaacaa 273  Q
    ||||||||||    
T  50341989 tcgttaacaa 50341998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 248
Target Start/End: Original strand, 54974733 - 54974826
Alignment:
Q  154 gtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaaga 248  Q
    |||| ||||||| |||| |||| |||||||||||||| || ||||| |||||| | |||||||| ||||||||  ||| |||||||  |||||||    
T  54974733 gtaagtttttataaaaatttatatattcaatgcattgaaagttgaagtatttg-agtttttaaataataatttcttaacttagtatctttaaaga 54974826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 11260673 - 11260576
Alignment:
Q  131 acactctttaagggtctt-aaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatttt 227  Q
    ||||||||||||  |||| ||||||||| ||| ||||||||  |||||| ||| ||||||| || ||| |  |||||| |||||||||||||| ||||    
T  11260673 acactctttaagcatctttaaatagtaaatttatatgaaaatatatgtaatcattgcattgaaatttgtaacatttgacttttttaaagaatattttt 11260576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 12658316 - 12658255
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttag 236  Q
    |||||| ||||||||  |||||| | ||||| |||||||||||||||| |||| ||||||||    
T  12658316 tgtatttaatgcattaaaaattgtaatatttaaattttttaaagaatagttttttaatttag 12658255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 17237001 - 17237062
Alignment:
Q  33 caatttcacttttcaatacaatattaattaattatcttttttcaattatacatcttaattaatacta 99  Q
    |||||||||||||||||| |||||||||||||    ||||||||||||||  || ||||||||||||    
T  17237001 caatttcacttttcaatataatattaattaat----ttttttcaattataactc-taattaatacta 17237062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 275
Target Start/End: Original strand, 21687592 - 21687720
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaa-tgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    |||||| |||||||||||| |||  || |||| | || ||||||| |||||||||  |||||  || ||||||||  |||   ||| |||| | ||||||    
T  21687592 ttaaatggtaactttttataaaagtttgtgtaataaagtgcattgaaaattgaacactttgatattattaaagaaatattacttaacttagaaagcttaa 21687691  T
Q  246 agagtgccccaggggcactcgttaacaaga 275  Q
    ||||||||| ||||||||||||||||||||    
T  21687692 agagtgccc-aggggcactcgttaacaaga 21687720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 22020664 - 22020631
Alignment:
Q  29 tgatcaatttcacttttcaatacaatattaatta 62  Q
    |||||||||| |||||||||||||||||||||||    
T  22020664 tgatcaattttacttttcaatacaatattaatta 22020631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 24754027 - 24753978
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaatt 196  Q
    ||||||||||| |||||||||||  ||||| | |||||||||||||||||    
T  24754027 ttaaatagtaaatttttatgaaagtttatgaaatcaatgcattggaaatt 24753978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 32104346 - 32104297
Alignment:
Q  146 cttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaat 195  Q
    |||||||| ||| |||||||||||| |||| ||||||||||||| |||||    
T  32104346 cttaaataataagtttttatgaaaatttatatattcaatgcattagaaat 32104297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 37316075 - 37316042
Alignment:
Q  29 tgatcaatttcacttttcaatacaatattaatta 62  Q
    ||||| ||||||||||||||||||||||||||||    
T  37316075 tgatccatttcacttttcaatacaatattaatta 37316042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 41436439 - 41436468
Alignment:
Q  33 caatttcacttttcaatacaatattaatta 62  Q
    ||||||||||||||||||||||||||||||    
T  41436439 caatttcacttttcaatacaatattaatta 41436468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 42902028 - 42901983
Alignment:
Q  153 agtaactttttatgaaaagttatgtattcaatgcattggaaattga 198  Q
    ||||||||||||||||||||| |||| || |||| |||||||||||    
T  42902028 agtaactttttatgaaaagttgtgtaatctatgctttggaaattga 42901983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 42956963 - 42957048
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaa 217  Q
    |||||||||||| ||  || |||||| | ||||| ||||  | |||| | |||||||||||||||||| ||||||| |||||||||    
T  42956963 cactctttaaggatcacaagtagtaagtatttataaaaatgtgtgtaattaatgcattggaaattgaaatatttgatttttttaaa 42957048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 272
Target Start/End: Complemental strand, 45900152 - 45900119
Alignment:
Q  239 tgcttaaagagtgccccaggggcactcgttaaca 272  Q
    ||||||||||||||||| ||||||||||||||||    
T  45900152 tgcttaaagagtgcccccggggcactcgttaaca 45900119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 46521603 - 46521474
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||| ||| ||||| | |||  ||||| | ||||||||||  |||||| | | ||| | ||||||||||||||||||  | |||  | || ||||||    
T  46521603 ttaaataataaatttttgttaaagtttatgaaatcaatgcattaaaaattggagtttttaacttttttaaagaataatttatttattaggaatccttaaa 46521504  T
Q  247 gagtgccccaggggcactcgttaacaagac 276  Q
    |||||| | | |||||||||||||||||||    
T  46521503 gagtgctctaagggcactcgttaacaagac 46521474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 47937906 - 47937834
Alignment:
Q  203 tttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||| |||||||||||||||||   |||||||||||| ||||||||| | || ||  ||||||||||||||||    
T  47937906 tttgacttttttaaagaataattacataatttagtatgtttaaagagtactcc-ggcacactcgttaacaagac 47937834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 49218930 - 49218886
Alignment:
Q  35 atttcacttttcaatacaatattaattaattatcttttttcaattata 82  Q
    |||||||||||||||||||||||||||| ||   ||||||||||||||    
T  49218930 atttcacttttcaatacaatattaattactt---ttttttcaattata 49218886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 272
Target Start/End: Original strand, 51291188 - 51291221
Alignment:
Q  239 tgcttaaagagtgccccaggggcactcgttaaca 272  Q
    ||||||||||||||||| ||||||||||||||||    
T  51291188 tgcttaaagagtgcccccggggcactcgttaaca 51291221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 5091882 - 5091926
Alignment:
Q  180 tcaatgcattggaaattgaactatttgaattttttaaagaataat 224  Q
    ||||||||||| |||||||| | ||||| ||||||||||||||||    
T  5091882 tcaatgcattgaaaattgaagtttttgacttttttaaagaataat 5091926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 8607651 - 8607743
Alignment:
Q  184 tgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||| |||||| |||||   ||||||||||||||||||  | ||| || ||| ||||||||||   | | ||||||||||||||||||    
T  8607651 tgcattggatattgaagtatttactttttttaaagaataatttctttattaagaatgtttaaagagtgatacggaggcactcgttaacaagac 8607743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 17970882 - 17970786
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaa-gaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaa 270  Q
    |||| ||| ||||||||||||||||  | ||  || ||||||| ||||||||   |||||||  |||||||||||||||||| |||| |||||||||    
T  17970882 tgtaatcagtgcattggaaattgaaaaactttgatattttaaatgaataattacttaatttatcatgcttaaagagtgccccgggggtactcgttaa 17970786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 21241189 - 21241098
Alignment:
Q  184 tgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||||||||||   |||||  |||||||| ||| ||||  |||||||  ||| |||||||||| ||| ||||| ||||||||||||||    
T  21241189 tgcattggaaattgaaaattttgatatttttaaaaaatcatttcttaatttaacatgtttaaagagtg-ccctggggcgctcgttaacaagac 21241098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 28330752 - 28330797
Alignment:
Q  35 atttcacttttcaatacaatattaattaattatcttttttcaattata 82  Q
    |||||||||||||||||||||||||||| |  | ||||||||||||||    
T  28330752 atttcacttttcaatacaatattaattact--ttttttttcaattata 28330797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 33266826 - 33266906
Alignment:
Q  147 ttaaatagtaactttttatgaaaagtt-atgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||| || || | ||||||| ||| | ||||| ||||||||||| || | ||||| ||||||||||||||||||    
T  33266826 ttaaatagtaagttatttttaaaagtttatgaaatcaatccattggaaattaaagtttttgacttttttaaagaataattt 33266906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 38945120 - 38945156
Alignment:
Q  240 gcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||||||| | ||||||||||||||||||||    
T  38945120 gcttaaagagtgccgcgggggcactcgttaacaagac 38945156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 272
Target Start/End: Original strand, 49951734 - 49951822
Alignment:
Q  184 tgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaaca 272  Q
    ||||||| ||||||||   |||||  |||| |||||||||||   |||||||| ||||||||||||| ||||  ||||||| |||||||    
T  49951734 tgcattgaaaattgaaaactttgacattttaaaagaataattacttaatttagcatgcttaaagagtaccccgagggcactagttaaca 49951822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 276
Target Start/End: Complemental strand, 51291224 - 51291056
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttga 207  Q
    |||||||||| | || ||||| | |||||||||||   || |||| ||||  ||||||||||  || || ||| | |||||||||||||||| | ||| |    
T  51291224 aaatgttaacgagtgccccgggggcactctttaagcacctaaaatggtaagattttatgaaagtttgtgcatttattgcattggaaattgaagtctttaa 51291125  T
Q  208 attttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
     | ||||||||||||| ||  | |||  | ||| |||||||||||| |  ||||| |||||||||||||    
T  51291124 ttattttaaagaataacttcttcattaggaatgtttaaagagtgcctcgagggcattcgttaacaagac 51291056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 55360497 - 55360452
Alignment:
Q  35 atttcacttttcaatacaatattaattaattatcttttttcaattata 82  Q
    |||||||||||||||||||||||||||| |  | ||||||||||||||    
T  55360497 atttcacttttcaatacaatattaattact--ttttttttcaattata 55360452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 4e-38; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 128 - 248
Target Start/End: Original strand, 5423734 - 5423854
Alignment:
Q  128 gagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatttt 227  Q
    |||||||||||||| |||||||||| |||| |||||||||||| ||||||||| ||||||||| |||||||||||||| | |||||||||||||||||||    
T  5423734 gagacactctttaaaggtcttaaatggtaattttttatgaaaacttatgtatttaatgcattgaaaattgaactatttaacttttttaaagaataatttt 5423833  T
Q  228 ctaatttagtatgcttaaaga 248  Q
    ||||||||  |||||||||||    
T  5423834 ctaatttaaaatgcttaaaga 5423854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 254
Target Start/End: Original strand, 1048670 - 1048783
Alignment:
Q  140 aagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtat 239  Q
    |||||||||||||| || ||||||||||||| ||||| |||||| |||||| |||||||||||||| || |||||||||||||||||| |||||| ||||    
T  1048670 aagggtcttaaataatatctttttatgaaaaattatgcattcaacgcattgaaaattgaactattt-aactttttaaagaataattttttaatttggtat 1048768  T
Q  240 gcttaaagagtgccc 254  Q
    |||||||||||||||    
T  1048769 gcttaaagagtgccc 1048783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 275
Target Start/End: Original strand, 26857181 - 26857326
Alignment:
Q  130 gacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttct 229  Q
    |||||| ||||||||||||||||||||| ||||||||| |  || | |||||||||||||| ||||| |||||||| | |||||||||||||||||||||    
T  26857181 gacactttttaagggtcttaaatagtaattttttatgagattttgtatattcaatgcattgaaaattaaactatttaacttttttaaagaataattttct 26857280  T
Q  230 aatttagtatgcttaaagagtgccccaggggcactcgttaacaaga 275  Q
    ||||||  ||| |||||| |||||  ||  ||||||||||||||||    
T  26857281 aatttacgatgtttaaagggtgccttagaagcactcgttaacaaga 26857326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 147 - 273
Target Start/End: Complemental strand, 48947303 - 48947177
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    |||||| ||||||||||||||||| || |||| ||| ||||||||||||||||   |||||  |||||||| |||||||   ||||||||||||||||||    
T  48947303 ttaaatggtaactttttatgaaaatttgtgtaatcagtgcattggaaattgaaaactttgacatttttaaaaaataattacttaatttagtatgcttaaa 48947204  T
Q  247 gagtgccccaggggcactcgttaacaa 273  Q
    || ||||||||||||||||||||||||    
T  48947203 gaatgccccaggggcactcgttaacaa 48947177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 143 - 276
Target Start/End: Complemental strand, 3047970 - 3047837
Alignment:
Q  143 ggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgct 242  Q
    ||||||||||||||| |||||||||||  || | || |||||||||||||||| |||  ||||||  ||||||||||| ||||   |||||||| |||||    
T  3047970 ggtcttaaatagtaattttttatgaaagtttgtttaatcaatgcattggaaatcgaaaaatttgacatttttaaagaacaattacttaatttagcatgct 3047871  T
Q  243 taaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||||||| ||||||||| ||||||||||    
T  3047870 taaagagtgccccgggggcactctttaacaagac 3047837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 132 - 270
Target Start/End: Original strand, 5250893 - 5251031
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa 231  Q
    ||||||||||| |  | ||||| ||| |||||||||||| || |||||| ||| ||||| ||||| |||| ||||| ||||||||||||||| || ||||    
T  5250893 cactctttaagagcataaaataataattttttatgaaaatttgtgtatttaatacattgaaaattaaactgtttgacttttttaaagaataacttcctaa 5250992  T
Q  232 tttagtatgcttaaagagtgccccaggggcactcgttaa 270  Q
    ||||||||| ||||||||||| || | ||||||||||||    
T  5250993 tttagtatgtttaaagagtgctccggaggcactcgttaa 5251031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 44442388 - 44442261
Alignment:
Q  106 gaaaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactattt 205  Q
    |||||||||||| | |||||||||  ||||  |||| ||||||||||||||||||||||| ||||  | |||||| |||| |||| |||||||| |||||    
T  44442388 gaaaatgttaacaagtgtcccgga--cacttgttaatggtcttaaatagtaactttttataaaaatatgtgtatttaatgtattgaaaattgaaatattt 44442291  T
Q  206 gaattttttaaagaataattttctaattta 235  Q
    || |||||||||||||||||| ||||||||    
T  44442290 gacttttttaaagaataatttcctaattta 44442261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 250
Target Start/End: Original strand, 46592437 - 46592579
Alignment:
Q  108 aaatgttaactaatgtccc-ggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttg 206  Q
    |||||||||| | |||||| |||| ||||||||||| | ||  ||||||||||||||||||||| || | |||| |||  |||||||||| |||| ||||    
T  46592437 aaatgttaacgagtgtccccggag-cactctttaagagcctagaatagtaactttttatgaaaacttgtctatttaatatattggaaattaaactgtttg 46592535  T
Q  207 aattttttaaagaataattttctaatttagtatgcttaaagagt 250  Q
    | ||||||||||||||| || ||||||||| |||||||||||||    
T  46592536 acttttttaaagaataacttcctaatttagcatgcttaaagagt 46592579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 39150669 - 39150547
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagg 258  Q
    |||| ||||||| ||||||||| ||||||||| |||||| | || |||| |||||  ||||||||||    ||||||| |||||||||||||||||| ||    
T  39150669 ttttaatgaaaatttatgtattgaatgcattgtaaattgtaatagttgactttttacaagaataattactaaatttaggatgcttaaagagtgccccggg 39150570  T
Q  259 ggcactcgttaacaagactcata 281  Q
    |||||||||||||||||| ||||    
T  39150569 ggcactcgttaacaagacccata 39150547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 276
Target Start/End: Complemental strand, 16114029 - 16113889
Alignment:
Q  138 ttaagggtcttaaatagtaacttttt--atgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaattta 235  Q
    ||||||| ||||||| ||||||||||  ||||||  || |||| ||| ||||||||||||||||   |||||  |||| ||| |||||||   |||| ||    
T  16114029 ttaaggggcttaaatggtaactttttttatgaaagtttgtgtaatcagtgcattggaaattgaaaactttgacattttgaaaaaataattacttaatata 16113930  T
Q  236 gtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  16113929 gtatgcttaaagagtgccccggaggcactcgttaacaagac 16113889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 34861259 - 34861348
Alignment:
Q  187 attggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||||||| | |||||  |||||||| |||||||   |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  34861259 attggaaattgaaatgtttgacatttttaaaaaataattacttaatttagaatgcttaaagagtgcccccggggcactcgttaacaagac 34861348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 276
Target Start/End: Original strand, 39912262 - 39912346
Alignment:
Q  192 aaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||| | ||||| ||||||||| ||||| || ||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  39912262 aaattgaattgtttgacttttttaaataataacttcctaatttagcatgcttaaagagtgtcccgggggcactcgttaacaagac 39912346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 281
Target Start/End: Complemental strand, 40053393 - 40053258
Alignment:
Q  146 cttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||||||||||||||||  || |||| | |||| |||| ||||||||   |||||  ||||||||||| ||||  ||||||||| ||||||||    
T  40053393 cttaaatagtaactttttatgaaagtttgtgtaataaatgtattgaaaattgaaaactttgacatttttaaagaacaattacctaatttagaatgcttaa 40053294  T
Q  246 agagtgccccaggggcactcgttaacaagactcata 281  Q
    | ||||| | || | |||||||||||||||| ||||    
T  40053293 aaagtgcactagagacactcgttaacaagacccata 40053258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 276
Target Start/End: Complemental strand, 2864280 - 2864113
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttg 206  Q
    |||||||||| | || ||||||| |||||||||||    ||||||||||| |||||| ||||||||| |||||| |||||||||||||||| | || |||    
T  2864280 aaatgttaacgagtgccccggag-cactctttaagcactttaaatagtaagtttttaatgaaaagttgtgtattgaatgcattggaaattgtaatagttg 2864182  T
Q  207 aattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
     | ||||||||||||||||    ||| | | ||| |||||||||| ||| ||| ||||||||||||||||    
T  2864181 -actttttaaagaataattcctaaatatgggatgtttaaagagtgtcccggggacactcgttaacaagac 2864113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 1601023 - 1600951
Alignment:
Q  172 ttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgctta 244  Q
    ||||||||| |||||||| ||||||||||||||| |  |||||||||||||||||| |||||||| |||||||    
T  1601023 ttatgtatttaatgcatttgaaattgaactatttaacatttttaaagaataattttgtaatttagaatgctta 1600951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 6983013 - 6983105
Alignment:
Q  163 tatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgcccc 255  Q
    |||||||| |||||||| |||||||||| |||||||| ||||||| | |||||| |||||||||  |||||| | || |||||||||||||||    
T  6983013 tatgaaaatttatgtatccaatgcattgaaaattgaaatatttgactcttttaatgaataatttcttaatttggaatacttaaagagtgcccc 6983105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 4521042 - 4521142
Alignment:
Q  174 atgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    ||||| |||||||||||||||||||| | ||| | ||||||||||||||||    |  |||||||||||||||||||||||  | |||||||||||||||    
T  4521042 atgtaatcaatgcattggaaattgaaatgtttaacttttttaaagaataatcgcttgttttagtatgcttaaagagtgccc--gaggcactcgttaacaa 4521139  T
Q  274 gac 276  Q
    |||    
T  4521140 gac 4521142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 42787848 - 42787730
Alignment:
Q  160 ttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggg 259  Q
    |||||||||||||| | ||  |||||| ||| |||||||||||||| | ||||||||  |||||||| ||||||||| || |||||| |||| ||  | |    
T  42787848 ttttatgaaaagttttataaccaatgctttgaaaattgaactatttaatttttttaataaataatttcctaatttagaatacttaaaaagtgtcctggag 42787749  T
Q  260 gcactcgttaacaagactc 278  Q
    |||||||||||||| ||||    
T  42787748 gcactcgttaacaatactc 42787730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 39156332 - 39156231
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaag 274  Q
    |||||| |||||||||||||||| | || |||| ||||| |||||||||||    |||||   |||||||||||||| | ||||||||||||||||||||    
T  39156332 tgtattgaatgcattggaaattgtagtagttgactttttaaaagaataattactaaatttttgatgcttaaagagtgtctcaggggcactcgttaacaag 39156233  T
Q  275 ac 276  Q
    ||    
T  39156232 ac 39156231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 275
Target Start/End: Original strand, 33791746 - 33791874
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    |||||||||||||||||||||||  || |||| ||  || |||||||||||||  ||||||  |||| |||||||||||   |||||||| || ||||||    
T  33791746 ttaaatagtaactttttatgaaagtttgtgtaatcggtgtattggaaattgaaaaatttgacattttaaaagaataattacttaatttagcatacttaaa 33791845  T
Q  247 gagtgccccaggggcactcgttaacaaga 275  Q
    ||||   | |||| |||||||||||||||    
T  33791846 gagtagtctagggacactcgttaacaaga 33791874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 39973983 - 39973863
Alignment:
Q  155 taactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccc 254  Q
    |||||||||||||||  || | || ||||||||||| ||||||||   ||| |  |||| |||||||||||   |||||||| |||||||||||||||||    
T  39973983 taactttttatgaaagtttgtataatcaatgcattgaaaattgaaaactttaacattttaaaagaataattacttaatttagcatgcttaaagagtgccc 39973884  T
Q  255 caggggcactcgttaacaaga 275  Q
    | | | |||||||||||||||    
T  39973883 cggagacactcgttaacaaga 39973863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 33744156 - 33744271
Alignment:
Q  161 tttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagggg 260  Q
    ||||||||||  |||||| ||||||||||| |||| ||| ||||||| ||||| ||| |||||||   || ||||  ||||||||||||||| | |||||    
T  33744156 tttatgaaaaaatatgtaatcaatgcattgaaaatcgaaatatttgactttttaaaaaaataattacttattttaaaatgcttaaagagtgctcaagggg 33744255  T
Q  261 cactcgttaacaagac 276  Q
    ||||| | ||||||||    
T  33744256 cactcctaaacaagac 33744271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 8365603 - 8365481
Alignment:
Q  147 ttaaatagtaactttttat-gaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| ||||||| ||||| | ||||||| ||||||||| | |||| | || |||| ||||| ||||||||||| |  ||||||| ||| ||||    
T  8365603 ttaaatagtaagtttttattgaaaaatgatgtattgaatgcattgaagattgtaatagttgattttttaaaagaataattattaaatttaggatgtttaa 8365504  T
Q  246 agagtgccccaggggcactcgtt 268  Q
    |||||||| | ||| ||||||||    
T  8365503 agagtgcctctgggacactcgtt 8365481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 17112797 - 17112672
Alignment:
Q  155 taactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataat--tttctaatttag-tatgcttaaagagtg 251  Q
    ||||| ||||||||||  |||||| ||||||||||||||||  || ||||||| |||||| |||||||||  || || |||| |  ||||||||||||||    
T  17112797 taactatttatgaaaatatatgtaatcaatgcattggaaatcaaaatatttgacttttttgaagaataataattacttattttgccatgcttaaagagtg 17112698  T
Q  252 ccccaggggcactcgttaacaagact 277  Q
    || |   |||||||||||||||||||    
T  17112697 cctcgaaggcactcgttaacaagact 17112672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 35259091 - 35259181
Alignment:
Q  185 gcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaaga 275  Q
    |||||||||||||||   ||| |  |||||||| ||||||||  |||||||| || |||||||||||||||  ||||||||||||||||||    
T  35259091 gcattggaaattgaaaacttttacatttttaaaaaataatttcttaatttagcatacttaaagagtgccccgagggcactcgttaacaaga 35259181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 43492135 - 43492265
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttga-attttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| ||||| | |||  ||||| | |||||||||||||||||||| | |||||  ||||||||| ||||||||  | |||  | || |||||    
T  43492135 ttaaatagtaaatttttgtcaaagtttatgaaatcaatgcattggaaattgaagtttttgactttttttaaaaaataatttctttattaggaatccttaa 43492234  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||   |||||||||||||||||||    
T  43492235 agagtgcccttagggcactcgttaacaagac 43492265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 280
Target Start/End: Complemental strand, 32572910 - 32572762
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa 231  Q
    |||||||||||   ||| |||||||| ||||||  |||| |||||||   |||| ||||||| ||  |  |||||| ||||||||| || | ||||||||    
T  32572910 cactctttaagcacctttaatagtaattttttacaaaaatttatgtaagtaatgtattggaatttataacatttgacttttttaaataaca-ttttctaa 32572812  T
Q  232 -tttagtatgcttaaagagtgccccaggggcactcgttaacaagactcat 280  Q
     |||||||||||||||||||| | ||||| |||||||||| |||||||||    
T  32572811 atttagtatgcttaaagagtgtcgcagggacactcgttaataagactcat 32572762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 40203068 - 40203153
Alignment:
Q  130 gacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaatttttta 215  Q
    ||||||||||||||   |||||| |||||||| | ||||||  | |||| |||||||||||||||||||| ||||||| |||||||    
T  40203068 gacactctttaaggtctttaaatggtaactttgtctgaaaatatgtgtaatcaatgcattggaaattgaaatatttgactttttta 40203153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 40377141 - 40377012
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    |||||| |||| || | |||||||||| |||| |||||| ||||| |||  || ||||||| ||||||| | ||| ||||  |  ||| | || ||||||    
T  40377141 ttaaatggtaatttatcatgaaaagttgtgtaatcaatgaattgggaatcaaaatatttgacttttttataaaattatttcttcttttggaatccttaaa 40377042  T
Q  247 gagtgccccaggggcactcgttaacaagac 276  Q
    |||||||| |||||||||||||||||||||    
T  40377041 gagtgcccaaggggcactcgttaacaagac 40377012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 130 - 226
Target Start/End: Complemental strand, 14758675 - 14758579
Alignment:
Q  130 gacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||||||   ||||||||||| |||||||||||| || || ||||||||||| | |||||||| | ||  | |||||||| |||||||||    
T  14758675 gacactctttaaggactttaaatagtaaatttttatgaaaaattgtgcattcaatgcatcgaaaattgaaatgttaaacttttttaaggaataattt 14758579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 276
Target Start/End: Complemental strand, 34445735 - 34445639
Alignment:
Q  180 tcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||||||||| ||| ||||||| ||||||| | | ||||||  |  ||| | || |||||||||||| || ||||||||||||||||||||    
T  34445735 tcaatgcattggaaatcgaaatatttgacttttttataaattaatttcttcttttggaatccttaaagagtgctccgggggcactcgttaacaagac 34445639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 41649983 - 41649899
Alignment:
Q  149 aaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatt 233  Q
    ||||||||| |||||||| ||| ||||| ||||||||||| |||||||||| | ||  | |||||||| |||||||||| |||||    
T  41649983 aaatagtaaatttttatggaaaattatgcattcaatgcatgggaaattgaaatgttaaacttttttaaggaataattttttaatt 41649899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 14358162 - 14358127
Alignment:
Q  27 aatgatcaatttcacttttcaatacaatattaatta 62  Q
    ||||||||||||||||||||||||||||||||||||    
T  14358162 aatgatcaatttcacttttcaatacaatattaatta 14358127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 45359266 - 45359333
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    |||||||||||| | || |||||||||||||| |||||||||||||| | ||||||||| || |||||    
T  45359266 tttttatgaaaattcatatattcaatgcattgaaaattgaactatttaacttttttaaataacaattt 45359333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 278
Target Start/End: Complemental strand, 45640685 - 45640515
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaacttttt-atgaaaagttatgtattcaatgcattggaaattgaactatttg 206  Q
    |||||||||| | |||||| |||||||||||||||  | ||||||||||| ||||| ||||||| || |||| | ||||||||| |||||  | || |||    
T  45640685 aaatgttaacgagtgtccccgagacactctttaagcattttaaatagtaagtttttgatgaaaa-ttgtgtaatgaatgcattgaaaattataataattg 45640587  T
Q  207 aattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactc 278  Q
    | ||||| |||||||| || |  ||||| | |||||| || |||| ||| | | ||||||||||| ||||||    
T  45640586 actttttgaaagaatagttcttaaatttgggatgctttaaaagtgtcccggagacactcgttaacgagactc 45640515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 1656537 - 1656447
Alignment:
Q  146 cttaaatagtaactttttatgaaaagttatgtatt-caatgcattggaaattgaactatttgaattttttaaagaataattttctaattta 235  Q
    |||||||| |||||||||||||||| || ||||||  ||||||||||||||||||   |||||  |||||||| ||||||| | |||||||    
T  1656537 cttaaataataactttttatgaaaaattgtgtattaaaatgcattggaaattgaaaattttgacatttttaaaaaataattatttaattta 1656447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 31807850 - 31807916
Alignment:
Q  210 tttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||||||||||   || ||||| ||||||||| ||||| || ||||||||||||||||||||    
T  31807850 tttttaaagaataattacttattttagaatgcttaaatagtgctccgggggcactcgttaacaagac 31807916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 32562360 - 32562438
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    ||||||||||| ||||||| |||| || |||||||| ||||||| |||||| | || |||||||||| ||| |||||||    
T  32562360 ttaaatagtaagtttttataaaaaattgtgtattcactgcattgaaaattgtaatagttgaatttttaaaataataatt 32562438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 37976864 - 37976799
Alignment:
Q  210 tttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||| |||||||| || ||||| |||||||||||||| ||| ||||||||||||| ||||||    
T  37976864 tttttaaagtataattttttattttagaatgcttaaagagtgtccc-ggggcactcgttatcaagac 37976799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 45925592 - 45925462
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttc-taatttagtatgcttaa 245  Q
    ||||||||||| ||||| | |||  ||||| | |||||| ||||||||||  | | ||||| |||||||||||||||||||| | ||| || || |||||    
T  45925592 ttaaatagtaagtttttgtcaaagtttatgaaatcaatgtattggaaatttgaatttttgacttttttaaagaataattttctttattaagaatccttaa 45925493  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    |||||| ||   || ||||||||||||||||    
T  45925492 agagtgtccttaggacactcgttaacaagac 45925462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 48022359 - 48022489
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| |||||| | ||||  |||||||| ||||||||| |||||| | || || | ||||| ||| |||||||    ||| | | ||||||||    
T  48022359 ttaaatagtaagtttttaataaaaaaatatgtattgaatgcattgaaaattgcaatagttaactttttaaaacaataattactaaatatgggatgcttaa 48022458  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    ||||| || ||||||||||||||||||||||    
T  48022459 agagtaccacaggggcactcgttaacaagac 48022489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 2886125 - 2886158
Alignment:
Q  29 tgatcaatttcacttttcaatacaatattaatta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  2886125 tgatcaatttcacttttcaatacaatattaatta 2886158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 4851266 - 4851382
Alignment:
Q  161 tttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagggg 260  Q
    |||||||||||||  ||| | | |||||| ||||||| | || |||| ||||| |||||||||||||  || ||   |||||||||||||| ||| | ||    
T  4851266 tttatgaaaagttgggtagtaagtgcatttgaaattgtaatagttgacttttt-aaagaataatttttaaaattgacatgcttaaagagtgtcccggagg 4851364  T
Q  261 cactcgttaacaagactc 278  Q
    ||||||||||||||||||    
T  4851365 cactcgttaacaagactc 4851382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 276
Target Start/End: Complemental strand, 34582749 - 34582624
Alignment:
Q  151 atagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagt 250  Q
    ||||||| |||||||||||| ||||| |||||||||||  |||||||||  |||  | ||||| |  |||||||||| |||||||  || ||| ||||||    
T  34582749 atagtaagtttttatgaaaacttatgcattcaatgcatcagaaattgaagcattatactttttcattgaataattttttaatttaaaatccttgaagagt 34582650  T
Q  251 gccccaggggcactcgttaacaagac 276  Q
    || |   ||||||||||||| |||||    
T  34582649 gctcttagggcactcgttaataagac 34582624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 38748742 - 38748831
Alignment:
Q  161 tttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagt 250  Q
    ||||||||||||| |||||| | ||||||| |||||  | || |||| ||||| ||||||||||||   ||||| |||||||||||||||    
T  38748742 tttatgaaaagttgtgtattgagtgcattgaaaattataatagttgactttttaaaagaataatttctaaatttggtatgcttaaagagt 38748831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 39914640 - 39914741
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaag 274  Q
    |||||| | ||||||| |||||| | || |||| ||||| |||||| |||| |  ||||| |||||||||||||||| ||| |  |||||||||||||||    
T  39914640 tgtattgagtgcattgaaaattgtaatagttgactttttaaaagaacaattgttaaatttggtatgcttaaagagtgtcccggaagcactcgttaacaag 39914739  T
Q  275 ac 276  Q
    ||    
T  39914740 ac 39914741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 7750523 - 7750463
Alignment:
Q  154 gtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaatttttt 214  Q
    |||||||||| ||||||||||| || | ||||||||||||||||||  |||||| ||||||    
T  7750523 gtaactttttttgaaaagttatataattaatgcattggaaattgaaacatttgactttttt 7750463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 276
Target Start/End: Original strand, 34232735 - 34232843
Alignment:
Q  168 aaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgt 267  Q
    |||||| |||||| || |||||| |||||| | || |||| ||||| |||||||||||    |||| || |||||||||||||| |||  | ||||||||    
T  34232735 aaagttgtgtattgaaagcattgaaaattgtaatagttgactttttaaaagaataattgctaaattaaggatgcttaaagagtgtcccgtgagcactcgt 34232834  T
Q  268 taacaagac 276  Q
    |||||||||    
T  34232835 taacaagac 34232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 37705885 - 37705845
Alignment:
Q  238 atgcttaaagagtgccccaggggcactcgttaacaagactc 278  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  37705885 atgcttaaagagtgctccgggggcactcgttaacaagactc 37705845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 40570695 - 40570659
Alignment:
Q  240 gcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||||||||| ||||||||||||||||||||    
T  40570695 gcttaaagagtgccccgggggcactcgttaacaagac 40570659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 41019601 - 41019512
Alignment:
Q  145 tcttaaatagtaactttttatgaaaag-ttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaattta 235  Q
    ||||||||||||| ||||||||||||| |||||||||||||| |||   |||| || ||||| |  |||||||||| ||||||| |||||||    
T  41019601 tcttaaatagtaattttttatgaaaagtttatgtattcaatgtatt--taatttaaatatttaacatttttaaagagtaattttttaattta 41019512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 15290450 - 15290496
Alignment:
Q  35 atttcacttttcaatacaatattaattaattatcttttttcaattata 82  Q
    |||||||||||||||||||||||||||| || | ||||||||||||||    
T  15290450 atttcacttttcaatacaatattaattactt-ttttttttcaattata 15290496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 25670778 - 25670857
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||| ||||| | |||  ||||| | ||||||||||| |||||| | | ||||| ||||||||||||||||||    
T  25670778 ttaaatagtaagtttttgttaaagtttatgaaatcaatgcattgaaaattggagtttttgacttttttaaagaataattt 25670857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 42573839 - 42573902
Alignment:
Q  210 tttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    |||| |||||||||||   |||||||| |||||||||||||||||| | |||||| ||||||||    
T  42573839 ttttaaaagaataattacttaatttagcatgcttaaagagtgccccggaggcacttgttaacaa 42573902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 43683331 - 43683288
Alignment:
Q  192 aaattgaactatttgaattttttaaagaataattttctaattta 235  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||    
T  43683331 aaattgaaatatttgatttttttaaagaataattttttaattta 43683288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 52757486 - 52757431
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaatttttt 214  Q
    ||||| |||||| ||||||| | |||||||||||||||||| ||||||| ||||||    
T  52757486 tttttttgaaaaattatgtaataaatgcattggaaattgaaatatttgactttttt 52757431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 276
Target Start/End: Original strand, 48892 - 49022
Alignment:
Q  146 cttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    |||| ||||||| |||||||||||  || |||| ||  ||||||| ||||||||   ||| |  ||||| ||||||||||   |||||||| ||| ||||    
T  48892 cttacatagtaaatttttatgaaagtttgtgtaatcggtgcattgaaaattgaaaacttttacatttttcaagaataattacttaatttagcatgattaa 48991  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
     ||||| || ||||| |||||||||||||||    
T  48992 cgagtgtcctaggggaactcgttaacaagac 49022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 255
Target Start/End: Original strand, 4039635 - 4039717
Alignment:
Q  173 tatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgcccc 255  Q
    |||||| |||||||||||||||| ||| ||||||| ||||||| | ||||||||  |  ||| | || |||||||||||||||    
T  4039635 tatgtaatcaatgcattggaaatcgaaatatttgacttttttataaaataatttattcttttggaatccttaaagagtgcccc 4039717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 4617997 - 4617919
Alignment:
Q  173 tatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtg 251  Q
    |||||||||||||||||  |||||| | ||||||  ||||| ||| ||||||||  |||||||||||  ||||||||||    
T  4617997 tatgtattcaatgcattcaaaattgtattatttggttttttaaaaaaataatttcttaatttagtattattaaagagtg 4617919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 4772037 - 4771995
Alignment:
Q  231 atttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    |||| |||||||||||||||||||| | |||||||||||||||    
T  4772037 atttggtatgcttaaagagtgccccggaggcactcgttaacaa 4771995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 18114532 - 18114570
Alignment:
Q  238 atgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  18114532 atgcttaaagagtgccccgcgggcactcgttaacaagac 18114570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 31043085 - 31042971
Alignment:
Q  162 ttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggc 261  Q
    ||||||||  || |||| ||||||||||| ||||||||   |||||  |||||||| |||||||   |||||||| ||||||||||| ||  || ||| |    
T  31043085 ttatgaaagtttgtgtaatcaatgcattgaaaattgaaaactttgacatttttaaaaaataattacttaatttagaatgcttaaagactgtgccggggac 31042986  T
Q  262 actcgttaacaagac 276  Q
    | |||||||||||||    
T  31042985 attcgttaacaagac 31042971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 43397021 - 43397071
Alignment:
Q  147 ttaaatagtaacttttta-tgaaaagttatgtattcaatgcattggaaatt 196  Q
    ||||||||||| |||||| ||||||||| |||||| |||||||||||||||    
T  43397021 ttaaatagtaagtttttaatgaaaagttgtgtattaaatgcattggaaatt 43397071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 46803652 - 46803571
Alignment:
Q  108 aaatgttaactaatgtcccggagacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattg 190  Q
    |||||||||| ||| |||||||| |||||||||||   ||| ||||||||||||||| |||||  | |||| |||||||||||    
T  46803652 aaatgttaacgaatatcccggag-cactctttaagcacctttaatagtaactttttaagaaaatatgtgtaatcaatgcattg 46803571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 22177283 - 22177324
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaa 216  Q
    ||||||||||||||||||||||||| || |||| ||||||||    
T  22177283 tgtattcaatgcattggaaattgaagtacttgacttttttaa 22177324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 27932993 - 27932960
Alignment:
Q  29 tgatcaatttcacttttcaatacaatattaatta 62  Q
    ||||| ||||||||||||||||||||||||||||    
T  27932993 tgatccatttcacttttcaatacaatattaatta 27932960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 28188720 - 28188648
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaa 220  Q
    ||||||||||| ||||| | |||  ||||| | |||||||||||||||||||| | ||||| ||||||||||||    
T  28188720 ttaaatagtaagtttttgttaaat-ttatgaaatcaatgcattggaaattgaagtttttgatttttttaaagaa 28188648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 35543450 - 35543539
Alignment:
Q  187 attggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||||||||||||   |||||  |||| ||| |||||||   |||||||| ||||||||| ||||| |||  ||||||||||||||||||    
T  35543450 attggaaattgaaaactttgatattttaaaaaaataattacttaatttagcatgcttaaatagtgctccaaaggcactcgttaacaagac 35543539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 45584638 - 45584509
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||| |||||||| | |||||||  | |||| ||||| |||  |||||| || ||||| | ||||||| | ||||||||  |  ||| | || ||||||    
T  45584638 ttaaaaagtaacttatcatgaaaatatgtgtaatcaatacatcagaaattaaaatatttaacttttttataaaataatttcttcttttggaatccttaaa 45584539  T
Q  247 gagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||| |||||| |||||||||||||    
T  45584538 gagtgccccgggggcattcgttaacaagac 45584509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 46896027 - 46895942
Alignment:
Q  151 atagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttag 236  Q
    ||||||| |||||||  ||| ||||| ||||||||||| |||||||||| |||| || ||||| ||  ||||||||  ||||||||    
T  46896027 atagtaagtttttatagaaatttatgcattcaatgcatcggaaattgaaatattagactttttcaataaataatttcttaatttag 46895942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 18038980 - 18038940
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaa 199  Q
    |||||||||||| || |||||||||||||| ||||||||||    
T  18038980 tttttatgaaaatttgtgtattcaatgcatcggaaattgaa 18038940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 272
Target Start/End: Complemental strand, 27542926 - 27542834
Alignment:
Q  180 tcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaaca 272  Q
    ||||| ||||||||  || | ||||||| |||||||||||||| ||||  ||||| |||| |||||||||| || | | || |||||||||||    
T  27542926 tcaatacattggaatatgtaatatttgacttttttaaagaatattttttaaatttggtatccttaaagagtacctcggaggtactcgttaaca 27542834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 34596109 - 34596197
Alignment:
Q  129 agacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaa 217  Q
    ||||||||||||||    ||||||  |||||||||||||||   | |||| ||||||||||| |||| ||| |||||||||||| ||||    
T  34596109 agacactctttaagacctttaaatgataactttttatgaaattatgtgtaatcaatgcattgaaaatcgaaatatttgaattttataaa 34596197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 36321659 - 36321739
Alignment:
Q  174 atgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccc 254  Q
    ||||| |||||||||||||||| ||| | ||| | |||| ||||||||||||   |  ||| |||||||||||||||||||    
T  36321659 atgtaatcaatgcattggaaatcgaaatgtttaacttttctaaagaataattacttgttttggtatgcttaaagagtgccc 36321739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 40286957 - 40286905
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaa 199  Q
    ||||||||||||||||||| |||  || |||| ||| ||||||||||||||||    
T  40286957 ttaaatagtaactttttataaaagtttgtgtactcagtgcattggaaattgaa 40286905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 47187840 - 47187932
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtg 251  Q
    |||| ||||||| ||||||||| |||||||||||||||  | || |||| ||||| || ||||||||    ||||| | ||||||||||||||    
T  47187840 ttttaatgaaaaattatgtattgaatgcattggaaattataatagttgattttttaaatgaataattactaaatttgggatgcttaaagagtg 47187932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 50222614 - 50222682
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaatttttta 215  Q
    ||||||||||| ||||||||||||    |||| ||||||||||| ||||| || ||||||| |||||||    
T  50222614 ttaaatagtaattttttatgaaaataagtgtaatcaatgcattgaaaattaaaatatttgattttttta 50222682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 9e-33; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 133 - 276
Target Start/End: Original strand, 54290770 - 54290913
Alignment:
Q  133 actctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaat 232  Q
    |||||||||| | || ||||| || ||||||||||||| || |||||| ||| |||||||||||||||| ||||| ||||||||||||||| || |||||    
T  54290770 actctttaagagcctaaaataatatctttttatgaaaacttgtgtatttaatacattggaaattgaactgtttgacttttttaaagaataacttcctaat 54290869  T
Q  233 ttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    |||  |||||||||||||||||| |||  |||||||||||||||    
T  54290870 ttatcatgcttaaagagtgccccggggatactcgttaacaagac 54290913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 130 - 281
Target Start/End: Original strand, 46547770 - 46547923
Alignment:
Q  130 gacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaa--gaataatttt 227  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||   || ||        
T  46547770 gacactctttaagggtcttatatagtaattttttatgaaaaattatgtattcaatgcattggaaattgaattatttgacttttttaaaataaaaaaaaaa 46547869  T
Q  228 ctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactcata 281  Q
     |||||| |||| ||||||||||| | ||| ||||| |||||||||||||||||    
T  46547870 ataatttggtatacttaaagagtgtctcagaggcacccgttaacaagactcata 46547923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 276
Target Start/End: Complemental strand, 43804065 - 43803940
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagag 249  Q
    ||||||||||||||||||||| || |||||| ||| |||||||||||||| | ||||| ||||||||||||||| |||| ||||||  ||||||||||||    
T  43804065 aatagtaactttttatgaaaacttgtgtatttaatacattggaaattgaattgtttgacttttttaaagaataactttccaatttatcatgcttaaagag 43803966  T
Q  250 tgccccaggggcactcgttaacaagac 276  Q
    | ||| | || ||||||||||||||||    
T  43803965 tacccga-ggacactcgttaacaagac 43803940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 51039856 - 51039766
Alignment:
Q  145 tcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaattta 235  Q
    |||||||  |||| |||||||||||| ||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||| |||||||    
T  51039856 tcttaaagcgtaaatttttatgaaaatttatgtattcaattcattgaaaattgaactatttgacttttttatagaataattttttaattta 51039766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 53040558 - 53040464
Alignment:
Q  157 actttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtg 251  Q
    |||||||||||||  || |||||||||| |||||||||||||| ||||||||||||||||| ||||||||  |||||||| || |||||||||||    
T  53040558 actttttatgaaagtttgtgtattcaatacattggaaattgaagtatttgaattttttaaataataatttcttaatttagaatccttaaagagtg 53040464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 11692820 - 11692729
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagt 250  Q
    ||||||| |||| ||||||||| ||| ||||| ||||| |||||||| | ||||||||||||||||||| ||||||| ||||||||||||||    
T  11692820 tttttataaaaacttatgtatttaatacattgcaaattaaactatttcacttttttaaagaataattttttaatttaatatgcttaaagagt 11692729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 4305156 - 4305280
Alignment:
Q  154 gtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa-tttagtatgcttaaagagtgc 252  Q
    |||| |||||||||||| |  |||| ||||| |||| ||| ||  | ||||||| ||||||||| |||| | |||||| |||||||| ||||||||||||    
T  4305156 gtaagtttttatgaaaaatcgtgtaatcaatacattagaatttataatatttgacttttttaaaaaata-tattctaaatttagtatccttaaagagtgc 4305254  T
Q  253 cccaggggcactcgttaacaagactc 278  Q
    ||||||||||||||||||||||||||    
T  4305255 cccaggggcactcgttaacaagactc 4305280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 273
Target Start/End: Complemental strand, 48551137 - 48551013
Alignment:
Q  149 aaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaaga 248  Q
    ||||||||||||||||| |||| || |||| ||  ||||||| ||||||||   |||||  |||||||||||||||||  |||||||| |||||||||||    
T  48551137 aaatagtaactttttataaaaaattgtgtaatcggtgcattgaaaattgaaaactttgacatttttaaagaataatttcttaatttagcatgcttaaaga 48551038  T
Q  249 gtgccccaggggcactcgttaacaa 273  Q
    |||| |  ||| |||||||||||||    
T  48551037 gtgctctggggacactcgttaacaa 48551013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 30299394 - 30299300
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    |||||||||||||||||||||  ||||| |||||| ||| || | |||| ||||||||| |||||||| || |||| ||||||||||||||||||    
T  30299394 cactctttaagggtcttaaatgataactatttatgcaaatttgtatatttaatgcattgaaaattgaattacttgacttttttaaagaataattt 30299300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 24313643 - 24313522
Alignment:
Q  155 taactttttatgaaaagttatgtattcaa-tgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgcc 253  Q
    |||||||||||||||| || |||| | || ||||||| ||||||||   |||||  |||||||||||||||| | |||||||| ||| ||||||||||||    
T  24313643 taactttttatgaaaatttgtgtagtaaaatgcattgaaaattgaaaactttgacatttttaaagaataattgtttaatttagaatgtttaaagagtgcc 24313544  T
Q  254 ccaggggcactcgttaacaaga 275  Q
    ||  || |||||||||||||||    
T  24313543 ccgaggacactcgttaacaaga 24313522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 276
Target Start/End: Complemental strand, 40690290 - 40690162
Alignment:
Q  144 gtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgctt 243  Q
    ||||||||| ||| ||||||||||||| || ||||||||||| |||| |||||||||||     |||||| |||||||||||| ||||||||  ||  ||    
T  40690290 gtcttaaatggtagctttttatgaaaacttgtgtattcaatgtattgaaaattgaacta----catttttcaaagaataatttcctaatttaaaattatt 40690195  T
Q  244 aaagagtgccccaggggcactcgttaacaagac 276  Q
    | |||||||||||  | ||| ||||||||||||    
T  40690194 agagagtgccccatagacacgcgttaacaagac 40690162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 3026991 - 3027121
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaa-tgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    |||||||||||||||||||||||  || |||| | || ||||||||||| ||||   |||||  |||||||| || ||||   |||||||| ||||||||    
T  3026991 ttaaatagtaactttttatgaaagtttgtgtagtgaagtgcattggaaaatgaaacctttgatatttttaaataaaaattacttaatttagaatgcttaa 3027090  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    ||||||| || | ||||||||||||||||||    
T  3027091 agagtgctccggaggcactcgttaacaagac 3027121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 270
Target Start/End: Original strand, 45529129 - 45529249
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaa-tttagtatgcttaaaga 248  Q
    |||||||| |||||||||||| ||||||| |||||||| || || ||| |   ||||| |||||| ||||||| |||||||| ||| | |||||||||||    
T  45529129 aatagtaagtttttatgaaaatttatgtaatcaatgcactgaaacttgtaacgtttgacttttttgaagaata-ttttctaaatttgggatgcttaaaga 45529227  T
Q  249 gtgccccaggggcactcgttaa 270  Q
    |||||||  |||||||||||||    
T  45529228 gtgccccgagggcactcgttaa 45529249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 278
Target Start/End: Original strand, 48180177 - 48180309
Alignment:
Q  147 ttaaatagtaactttt-tatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| |||| ||||||| |||  |||  ||||||||||||||||| | || |||| ||||| ||||||||||| |  ||||  | ||||||||    
T  48180177 ttaaatagtaagttttttatgaaatgttgggtaaccaatgcattggaaattgtaatagttgactttttaaaagaataattgttaaattggggatgcttaa 48180276  T
Q  246 agagtgccccaggggcactcgttaacaagactc 278  Q
    |||||| ||| | | ||||||||||||||||||    
T  48180277 agagtgtcccggagacactcgttaacaagactc 48180309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 276
Target Start/End: Original strand, 31625359 - 31625469
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagg 258  Q
    |||||||||||| || |||||| ||| |||| || || ||||  ||||| ||||||||||||||| || ||||||       ||||||||||| ||||||    
T  31625359 tttttatgaaaacttgtgtatttaatacatttgacatagaacagtttgacttttttaaagaataacttcctaatt-------cttaaagagtgtcccagg 31625451  T
Q  259 ggcactcgttaacaagac 276  Q
    ||||||||||||||||||    
T  31625452 ggcactcgttaacaagac 31625469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 276
Target Start/End: Complemental strand, 25317905 - 25317775
Alignment:
Q  146 cttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    |||||||||||| ||||||| |||  || |||| || |||||||||||||||||   ||| || |||| |||||||||||   | |||||| |||||| |    
T  25317905 cttaaatagtaaatttttataaaagtttgtgtaatcgatgcattggaaattgaaaacttttaaattttaaaagaataattactttatttagcatgcttga 25317806  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    |||||| ||| | ||| ||||||||||||||    
T  25317805 agagtgtcccggaggcgctcgttaacaagac 25317775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 37708509 - 37708407
Alignment:
Q  174 atgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    ||||| ||| ||||||| |||||||| | ||| | ||||||||||| |||||   || |||| ||||||||||||||||| | |||||||| ||||||||    
T  37708509 atgtaatcagtgcattgaaaattgaaatgtttaacttttttaaagactaattgcttattttaatatgcttaaagagtgcctcgggggcacttgttaacaa 37708410  T
Q  274 gac 276  Q
    |||    
T  37708409 gac 37708407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 52309026 - 52308984
Alignment:
Q  236 gtatgcttaaagagtgccccaggggcactcgttaacaagactc 278  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  52309026 gtatgcttaaagagtgccccgggggcactcgttaacaagactc 52308984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 12140246 - 12140145
Alignment:
Q  146 cttaaatagtaactttttatgaaaagttatgtat--tcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgctt 243  Q
    |||||||||||||||||||| ||||||| |||||  ||| | ||||||||||||||   |||||  |||| ||||||||||| | |||||||| ||||||    
T  12140246 cttaaatagtaactttttataaaaagtt-tgtataatcagtacattggaaattgaaaactttgacattttaaaagaataattatttaatttagcatgctt 12140148  T
Q  244 aaa 246  Q
    |||    
T  12140147 aaa 12140145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 276
Target Start/End: Original strand, 42846024 - 42846143
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgca-ttggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgc-ccca 256  Q
    |||| |||||||||| |||||| |||||| ||| |||||||| || |||| ||||| |||||||||||    ||||||| |||||||||||||||  ||     
T  42846024 ttttaatgaaaagttgtgtattgaatgcaattgaaaattgaaatagttgactttttcaaagaataattactaaatttaggatgcttaaagagtgcatccg 42846123  T
Q  257 ggggcactcgttaacaagac 276  Q
    | |||||||| |||||||||    
T  42846124 gaggcactcgctaacaagac 42846143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 53433197 - 53433272
Alignment:
Q  151 atagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||| | |||||| ||||||| ||||||||| | ||||| || ||||||| ||||||| ||||||||||    
T  53433197 atagtaactttctttgaaaatttatgtaatcaatgcatcgaaaattaaaatatttgacttttttatagaataattt 53433272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 1511427 - 1511325
Alignment:
Q  154 gtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttga-attttttaaagaataattttctaatttagtatgcttaaagagtgc 252  Q
    |||||||||| |||||| | ||||| |||||||||||||||||||| | ||||| |||||| |  |||||||||  |  ||| | |||||||||||||||    
T  1511427 gtaactttttttgaaaattaatgtaatcaatgcattggaaattgaaatctttgacatttttgatggaataatttcttcttttggcatgcttaaagagtgc 1511328  T
Q  253 ccc 255  Q
    |||    
T  1511327 ccc 1511325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 281
Target Start/End: Original strand, 11465632 - 11465766
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||||||| ||||| | |||  ||||| | ||| || |||| |||||||| | ||||| ||||||||||||||||||| | ||| |  || ||||||    
T  11465632 ttaaatagtaagtttttgtcaaagtttatgaaatcactgtattgaaaattgaagtttttgacttttttaaagaataatttttttattaaaaatccttaaa 11465731  T
Q  247 gagtgccccaggggcactcgttaacaagactcata 281  Q
    |||||  |   || |||||||||||||||||||||    
T  11465732 gagtgttcttaggacactcgttaacaagactcata 11465766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 29612056 - 29611990
Alignment:
Q  210 tttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||||||||||   || ||||| ||| |||||||||| ||| ||||||||||||||||||||    
T  29612056 tttttaaagaataattacttattttagaatgtttaaagagtgtcccgggggcactcgttaacaagac 29611990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 276
Target Start/End: Complemental strand, 45758029 - 45757899
Alignment:
Q  146 cttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    |||||||| ||  |||||||||||  || |||| ||| ||||||| ||||||||   |||||  ||||||||||||||||   |||||||  ||||||||    
T  45758029 cttaaataatatttttttatgaaagtttgtgtaatcagtgcattgtaaattgaaaactttgacatttttaaagaataattgcttaatttaacatgcttaa 45757930  T
Q  246 agagtgccccaggggcactcgttaacaagac 276  Q
    ||||||  || | | ||||||||||||||||    
T  45757929 agagtgatccggagacactcgttaacaagac 45757899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 7278172 - 7278301
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaa 246  Q
    ||||||||||| |||||||  ||| || || ||| |||||||||||||| ||| ||||    |||| ||| ||||| |||  ||||| ||||| ||||||    
T  7278172 ttaaatagtaagtttttatcgaaacttgtgcattgaatgcattggaaatcgaaatattaagcttttctaatgaatagtttcgtaattgagtatccttaaa 7278271  T
Q  247 gagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||   |||||||||||| ||||||    
T  7278272 gagtgcccttagggcactcgttagcaagac 7278301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 21813148 - 21813209
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaa 193  Q
    |||||||||||| | ||||||||||| |||||||| ||| ||||| ||||||||||| ||||    
T  21813148 cactctttaaggattttaaatagtaaatttttatggaaaattatgcattcaatgcatcggaa 21813209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 253
Target Start/End: Original strand, 26900029 - 26900138
Alignment:
Q  147 ttaaatagtaactttt-tatgaaaagttatgtattcaatgcattggaaattgaactatttgaatttttt-aaagaataa-ttttctaatttagtatgctt 243  Q
    |||||| |||| |||| |||||||||||||||| | ||||||||| |||||| | || |||| |||||| ||||||||| |||||  |||| | ||||||    
T  26900029 ttaaatggtaaattttatatgaaaagttatgtaataaatgcattgaaaattgtaatagttgacttttttaaaagaataatttttcacatttgggatgctt 26900128  T
Q  244 aaagagtgcc 253  Q
    ||||||||||    
T  26900129 aaagagtgcc 26900138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 281
Target Start/End: Original strand, 49003113 - 49003204
Alignment:
Q  186 cattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagactcata 281  Q
    |||||||||||||| | ||||| |||||||  ||||||||||||  | ||  ||||||||||||||||||  || |||||||||||||||| ||||    
T  49003113 cattggaaattgaaatctttgacttttttatggaataattttct--tataaaatgcttaaagagtgcccc--ggacactcgttaacaagacccata 49003204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 273
Target Start/End: Complemental strand, 54911295 - 54911174
Alignment:
Q  152 tagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtg 251  Q
    ||||||||||||||||||  ||||||| |||||| |||| ||||| ||   ||| |  |||| ||||||||||| | |||||||| ||| ||||||| ||    
T  54911295 tagtaactttttatgaaagtttatgtaatcaatgtattgaaaatttaaaactttaacattttaaaagaataattatttaatttagaatgtttaaagattg 54911196  T
Q  252 ccccaggggcactcgttaacaa 273  Q
    ||||| |  |||| ||||||||    
T  54911195 ccccaagatcacttgttaacaa 54911174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 20106610 - 20106551
Alignment:
Q  177 tattcaatgcattggaaattgaactatttgaatttttt--aaagaataattttctaattt 234  Q
    |||||||||||||| |||||||| ||||||| ||||||  ||||||||||||| ||||||    
T  20106610 tattcaatgcattgcaaattgaaatatttgatttttttaaaaagaataattttttaattt 20106551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 273
Target Start/End: Complemental strand, 28874588 - 28874465
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttct-aatttagtatgcttaaaga 248  Q
    |||||||| ||||||||||||  | |||| |||||||||||||| ||| |  |||| | |||||||||||||  |||||| |||||||||| ||||| ||    
T  28874588 aatagtaaatttttatgaaaaactgtgtaatcaatgcattggaatttgtaacattttacttttttaaagaat-gttttctaaatttagtatccttaacga 28874490  T
Q  249 gtgccccaggggcactcgttaacaa 273  Q
    ||||  | |||| | ||||||||||    
T  28874489 gtgcttcgggggtagtcgttaacaa 28874465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 32071210 - 32071082
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttct-aatttagtatgcttaaaga 248  Q
    |||||||||||||||||||||  || ||| |||| || |||||| ||| |  ||||||||||||||| |||| ||||||| |||| || || ||| ||||    
T  32071210 aatagtaactttttatgaaaaactaggtaatcaaagctttggaatttgtaacatttgaattttttaaggaat-attttctaaattaaggatccttcaaga 32071112  T
Q  249 gtgccccaggggcactcgttaacaagactcat 280  Q
      ||||||| ||||||| ||||| ||||||||    
T  32071111 --gccccagaggcactcattaacgagactcat 32071082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 32606389 - 32606441
Alignment:
Q  147 ttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaa 199  Q
    ||||||| ||| |||||||||||| ||||| ||||||||||| ||||||||||    
T  32606389 ttaaataataaatttttatgaaaaattatgcattcaatgcatcggaaattgaa 32606441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 53641684 - 53641760
Alignment:
Q  150 aatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    |||||||| ||||| | |||  ||||| | |||||||||| |||||| || | ||||||||||||||||||||||||    
T  53641684 aatagtaagtttttgtcaaagtttatgaaatcaatgcattagaaatttaagtttttgaattttttaaagaataattt 53641760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 55110114 - 55110046
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatttt 227  Q
    ||||||||||||  |||||| ||||||||||| |||| ||| ||||||| ||||||| | |||||||||    
T  55110114 tttttatgaaaatatatgtaatcaatgcattgaaaatcgaaatatttgatttttttataaaataatttt 55110046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 13804883 - 13804974
Alignment:
Q  175 tgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcg 266  Q
    ||||||||||||||||||||| ||| ||||||| ||||| || |||| ||||  |||||  | || ||||||||  |||||| |||||||||    
T  13804883 tgtattcaatgcattggaaatcgaagtatttgactttttgaaggaatgatttcttaattcggaatccttaaagatggccccaagggcactcg 13804974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 39400319 - 39400410
Alignment:
Q  182 aatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaa 273  Q
    ||||||||| ||||| || | ||| | || ||||||||||||||   || |||||||| ||||||||||| | | |||||||||||||||||    
T  39400319 aatgcattgaaaattaaaatgtttaacttgtttaaagaataattaattattttagtatacttaaagagtgtcacgggggcactcgttaacaa 39400410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 40546399 - 40546348
Alignment:
Q  174 atgtattcaatgcattggaaattgaactatttgaattttttaaagaataatt 225  Q
    ||||| |||||||||||||||| ||| ||||||| ||||||||| |||||||    
T  40546399 atgtaatcaatgcattggaaatcgaaatatttgacttttttaaaaaataatt 40546348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 269
Target Start/End: Complemental strand, 2831634 - 2831524
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccccagg 258  Q
    |||||||||||| || | || ||| ||||||  |||||||| ||||||| ||| ||||| ||||||||  | |||| | || ||||||||||| | || |    
T  2831634 tttttatgaaaacttgtataatcattgcatttaaaattgaaatatttgactttattaaaaaataatttcttgatttggaatccttaaagagtgtctcatg 2831535  T
Q  259 ggcactcgtta 269  Q
    |||||||||||    
T  2831534 ggcactcgtta 2831524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 248
Target Start/End: Original strand, 16992400 - 16992510
Alignment:
Q  138 ttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagt 237  Q
    |||||| ||| || ||||||||| || |||||| || |||||||||||  ||||||||||||  |||| | ||||||||  ||| ||||||| |||||      
T  16992400 ttaaggatctcaagtagtaacttattttgaaaacttgtgtattcaatgttttggaaattgaatcatttaacttttttaataaattattttcttatttaaa 16992499  T
Q  238 atgcttaaaga 248  Q
    || ||||||||    
T  16992500 atacttaaaga 16992510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 2868528 - 2868561
Alignment:
Q  29 tgatcaatttcacttttcaatacaatattaatta 62  Q
    ||||| ||||||||||||||||||||||||||||    
T  2868528 tgatccatttcacttttcaatacaatattaatta 2868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 8498209 - 8498242
Alignment:
Q  29 tgatcaatttcacttttcaatacaatattaatta 62  Q
    ||||| ||||||||||||||||||||||||||||    
T  8498209 tgatccatttcacttttcaatacaatattaatta 8498242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 4824656 - 4824724
Alignment:
Q  183 atgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtg 251  Q
    |||||||| |||||||| ||||| |||||||||   ||||||||  |||||||| || |||||||||||    
T  4824656 atgcattgaaaattgaagtatttaaattttttagttaataatttcttaatttagaatccttaaagagtg 4824724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 19898116 - 19898188
Alignment:
Q  154 gtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    |||| ||||||||||||  | |||| ||||||||||| |||||||| ||||||| |||| || | ||||||||    
T  19898116 gtaaatttttatgaaaatatgtgtaatcaatgcattgaaaattgaaatatttgatttttatataaaataattt 19898188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 276
Target Start/End: Original strand, 38457225 - 38457351
Alignment:
Q  148 taaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaag 247  Q
    |||||||||| | |||| |||||   ||||| ||||||||||| ||||  || ||||| |||||||||||||||||||   || | ||| ||||||||||    
T  38457225 taaatagtaagtatttacgaaaatacatgtaatcaatgcattgaaaatcaaaatattt-aattttttaaagaataattgcttattatagaatgcttaaag 38457323  T
Q  248 agtgccccaggggcactcgttaacaagac 276  Q
    | ||  || || |||||||||||||||||    
T  38457324 aatg-tcctggagcactcgttaacaagac 38457351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 41571586 - 41571698
Alignment:
Q  159 tttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaa-taattttctaatttagtatgcttaaagagtgccccag 257  Q
    ||||| |||||| | ||||| |||||||||| ||||||||| | ||||  |||||||| ||| ||||||  |  ||| | ||||||||||||||||||||    
T  41571586 tttttttgaaaattaatgtaatcaatgcattcgaaattgaaatttttggcttttttaatgaaataatttcttcttttggaatgcttaaagagtgccccag 41571685  T
Q  258 gggcactcgttaa 270  Q
     | || |||||||    
T  41571686 agacattcgttaa 41571698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 50604087 - 50604023
Alignment:
Q  212 tttaaagaataattttctaatttagtatgcttaaagagtgccccaggggcactcgttaacaagac 276  Q
    ||||||||||||||   |||||||| ||| |||||||||||||  | | ||||||||||||||||    
T  50604087 tttaaagaataattacttaatttagaatggttaaagagtgccctggagacactcgttaacaagac 50604023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 53038365 - 53038269
Alignment:
Q  160 ttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaata-attttctaatttagtatgcttaaagagtgcccc 255  Q
    ||||||||||| |   ||||||| |||||||||| ||| | ||||||||||||| ||||||||  ||||  ||||||  ||| ||||||||||||||    
T  53038365 ttttatgaaaattcgcgtattcagtgcattggaatttgtaatatttgaatttttgaaagaatattttttaaaatttaaaatgtttaaagagtgcccc 53038269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 131 - 248
Target Start/End: Complemental strand, 219308 - 219188
Alignment:
Q  131 acactctttaagggtcttaaatagtaacttttt---atgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatttt 227  Q
    ||||| ||||||||||||||||| ||| |||||   || ||||  |||||||| |||||||||||||||||||||||||| |||| |||||||||||||     
T  219308 acactttttaagggtcttaaataataatttttttttataaaaatatatgtatttaatgcattggaaattgaactatttgacttttgtaaagaataatttc 219209  T
Q  228 ctaatttagtatgcttaaaga 248  Q
    ||||||||  |||||||||||    
T  219208 ctaatttaaaatgcttaaaga 219188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 5013 - 5097
Alignment:
Q  149 aaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatt 233  Q
    ||||||||| |||||||| ||| ||||| ||||||||||| |||||||||| | ||  | |||||||| |||||||||| |||||    
T  5013 aaatagtaaatttttatggaaaattatgcattcaatgcatgggaaattgaaatgttaaacttttttaaggaataattttttaatt 5097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 281
Target Start/End: Original strand, 18116 - 18250
Alignment:
Q  147 ttaaatagtaactttttatgaaaagtt-atgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaa 245  Q
    ||||||||||| ||||| | ||||||| ||||| |||||| || || ||||||| ||||||| |||||||    |||||||  |  ||||| || |||||    
T  18116 ttaaatagtaagttttt-taaaaagtttatgtaatcaatgtatcgggaattgaaatatttgacttttttatgacataatttcttcttttagcatccttaa 18214  T
Q  246 agagtgccccaggggcactcgttaacaagactcata 281  Q
    |||||| ||||| |||||||||| ||||||||||||    
T  18215 agagtgtcccagaggcactcgtttacaagactcata 18250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1444 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1444
Description:

Target: scaffold1444; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 1721 - 1786
Alignment:
Q  157 actttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaata 222  Q
    ||||||||||||||||| || |||||||||||||||||||| | || |||  ||||| ||||||||    
T  1721 actttttatgaaaagttgtgcattcaatgcattggaaattgtaatagttggctttttaaaagaata 1786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 213643 - 213548
Alignment:
Q  132 cactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataatttt 227  Q
    ||||||||||||  ||| |||||| |  ||||||||||  || ||||||||| |||||| || ||| | ||||||||||||||||| |||| ||||    
T  213643 cactctttaaggacctttaatagtgagattttatgaaagtttgtgtattcaacgcattgaaacttgtaatatttgaattttttaaaaaatattttt 213548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 48845 - 48799
Alignment:
Q  180 tcaatgcattggaaattgaactatttgaattttttaaagaataattt 226  Q
    ||||||||||| |||||||| | ||||| ||||||||||||||||||    
T  48845 tcaatgcattgaaaattgaagtttttgatttttttaaagaataattt 48799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 26795 - 26693
Alignment:
Q  152 tagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaataattttctaatttagtatgcttaaagagtg 251  Q
    ||||||||||||| ||||  || |||| ||| ||||||| ||||||||   |||||  |||| ||| |||||||   |||||||| ||||||||||||||    
T  26795 tagtaactttttacgaaagtttgtgtaatcagtgcattgaaaattgaaaactttgacattttaaaataataattacttaatttagcatgcttaaagagtg 26696  T
Q  252 ccc 254  Q
    |||    
T  26695 ccc 26693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 62
Target Start/End: Complemental strand, 9697 - 9669
Alignment:
Q  34 aatttcacttttcaatacaatattaatta 62  Q
    |||||||||||||||||||||||||||||    
T  9697 aatttcacttttcaatacaatattaatta 9669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 20238 - 20330
Alignment:
Q  130 gacactctttaagggtcttaaatagtaactttttatgaaaagttatgtattcaatgcattggaaattgaactatttgaattttttaaagaata 222  Q
    |||||||||||||    ||||||  ||| ||||||||||||||| |||||| |||||||| ||||||| | || || | ||||| ||||||||    
T  20238 gacactctttaagcactttaaatgataagtttttatgaaaagttgtgtatttaatgcatttgaaattgtaatagttaactttttaaaagaata 20330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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