View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14794_low_7 (Length: 381)

Name: NF14794_low_7
Description: NF14794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14794_low_7
NF14794_low_7
[»] chr6 (18 HSPs)
chr6 (1-372)||(12155969-12156340)
chr6 (2-53)||(23101326-23101378)
chr6 (2-49)||(31705320-31705368)
chr6 (307-372)||(1415476-1415541)
chr6 (2-39)||(19402728-19402765)
chr6 (2-39)||(23638038-23638075)
chr6 (2-39)||(23654416-23654453)
chr6 (2-39)||(31937338-31937375)
chr6 (297-372)||(9627253-9627326)
chr6 (2-53)||(15590026-15590078)
chr6 (4-39)||(35219833-35219868)
chr6 (2-40)||(29284918-29284956)
chr6 (50-99)||(1419094-1419143)
chr6 (2-39)||(1915104-1915141)
chr6 (2-39)||(2304756-2304793)
chr6 (2-39)||(8693572-8693609)
chr6 (2-39)||(12481288-12481325)
chr6 (2-53)||(21507755-21507807)
[»] chr2 (37 HSPs)
chr2 (196-285)||(32985710-32985799)
chr2 (2-49)||(5754443-5754491)
chr2 (2-49)||(36868163-36868211)
chr2 (84-143)||(28413639-28413698)
chr2 (2-40)||(11581048-11581086)
chr2 (2-39)||(4426576-4426613)
chr2 (2-39)||(9978587-9978624)
chr2 (2-39)||(10286925-10286962)
chr2 (2-43)||(13740578-13740619)
chr2 (2-39)||(22597301-22597338)
chr2 (2-39)||(28231015-28231052)
chr2 (2-39)||(28261806-28261843)
chr2 (2-39)||(32314608-32314645)
chr2 (2-39)||(34962994-34963031)
chr2 (2-39)||(35333671-35333708)
chr2 (2-39)||(43474046-43474083)
chr2 (2-38)||(4739496-4739532)
chr2 (2-49)||(12891036-12891084)
chr2 (2-53)||(33012199-33012251)
chr2 (2-49)||(18089315-18089362)
chr2 (2-37)||(20561050-20561085)
chr2 (3-38)||(31908735-31908770)
chr2 (1-39)||(4604224-4604262)
chr2 (4-38)||(43696035-43696069)
chr2 (2-39)||(4732236-4732273)
chr2 (2-39)||(9689903-9689940)
chr2 (2-39)||(11798441-11798478)
chr2 (2-39)||(12704853-12704890)
chr2 (2-39)||(27666376-27666413)
chr2 (2-35)||(34471136-34471169)
chr2 (2-39)||(38384375-38384412)
chr2 (2-39)||(38535223-38535260)
chr2 (2-39)||(44942452-44942489)
chr2 (2-49)||(6431320-6431368)
chr2 (2-38)||(13548819-13548855)
chr2 (2-38)||(26254854-26254890)
chr2 (45-141)||(27665616-27665712)
[»] chr8 (28 HSPs)
chr8 (209-293)||(34697149-34697233)
chr8 (2-51)||(37128413-37128463)
chr8 (2-39)||(2968698-2968735)
chr8 (2-49)||(22787647-22787695)
chr8 (2-38)||(24210408-24210444)
chr8 (4-49)||(2234398-2234444)
chr8 (2-40)||(14600624-14600662)
chr8 (26-143)||(977244-977360)
chr8 (2-39)||(7579781-7579818)
chr8 (2-39)||(43937103-43937140)
chr8 (2-53)||(3204711-3204763)
chr8 (2-38)||(31407674-31407710)
chr8 (2-52)||(10633107-10633158)
chr8 (2-37)||(28297033-28297068)
chr8 (2-40)||(19720174-19720212)
chr8 (2-39)||(1039820-1039857)
chr8 (2-39)||(2025150-2025187)
chr8 (2-39)||(4757331-4757368)
chr8 (2-39)||(9501752-9501789)
chr8 (46-119)||(12832370-12832442)
chr8 (4-49)||(14186895-14186940)
chr8 (2-35)||(24700002-24700035)
chr8 (2-39)||(30026808-30026845)
chr8 (2-39)||(37612819-37612856)
chr8 (2-35)||(41361902-41361935)
chr8 (81-141)||(7763606-7763666)
chr8 (4-40)||(10334341-10334377)
chr8 (2-38)||(31202625-31202661)
[»] chr7 (29 HSPs)
chr7 (2-53)||(28664859-28664911)
chr7 (2-48)||(9719891-9719938)
chr7 (2-40)||(11833183-11833221)
chr7 (2-40)||(48304311-48304349)
chr7 (2-39)||(1281055-1281092)
chr7 (2-39)||(5238119-5238156)
chr7 (2-39)||(10094607-10094644)
chr7 (2-39)||(21603626-21603663)
chr7 (2-39)||(24320141-24320178)
chr7 (2-39)||(24988398-24988435)
chr7 (2-54)||(36579259-36579312)
chr7 (2-49)||(9785472-9785520)
chr7 (2-49)||(17509122-17509170)
chr7 (2-49)||(17544044-17544092)
chr7 (2-53)||(26161102-26161154)
chr7 (2-53)||(31703359-31703411)
chr7 (2-49)||(45457474-45457522)
chr7 (2-48)||(3266542-3266589)
chr7 (2-48)||(41288112-41288159)
chr7 (4-53)||(5948832-5948882)
chr7 (2-35)||(4621285-4621318)
chr7 (2-43)||(21954736-21954777)
chr7 (2-39)||(21990828-21990865)
chr7 (2-39)||(29352392-29352429)
chr7 (2-39)||(45482230-45482267)
chr7 (2-39)||(46025947-46025984)
chr7 (2-53)||(17473670-17473722)
chr7 (2-53)||(17579492-17579544)
chr7 (2-34)||(42603687-42603719)
[»] chr5 (20 HSPs)
chr5 (2-49)||(23882034-23882082)
chr5 (2-39)||(980947-980984)
chr5 (2-39)||(11858076-11858113)
chr5 (2-39)||(17331494-17331531)
chr5 (4-48)||(26294977-26295022)
chr5 (2-39)||(33164386-33164423)
chr5 (1-49)||(43494015-43494064)
chr5 (2-53)||(12439581-12439633)
chr5 (2-49)||(23428407-23428455)
chr5 (257-293)||(38755534-38755570)
chr5 (2-48)||(6635404-6635451)
chr5 (4-39)||(29097955-29097990)
chr5 (2-40)||(25962084-25962122)
chr5 (2-39)||(6281210-6281247)
chr5 (82-143)||(11824899-11824960)
chr5 (2-39)||(17096159-17096196)
chr5 (1-34)||(39179745-39179778)
chr5 (2-49)||(7771739-7771787)
chr5 (4-40)||(18573484-18573520)
chr5 (6-38)||(34431227-34431259)
[»] chr3 (23 HSPs)
chr3 (2-49)||(22485120-22485168)
chr3 (64-143)||(55125467-55125546)
chr3 (2-49)||(55455021-55455068)
chr3 (2-39)||(11819249-11819286)
chr3 (2-39)||(14585628-14585665)
chr3 (2-39)||(35174874-35174911)
chr3 (2-39)||(36624621-36624658)
chr3 (2-39)||(49628021-49628058)
chr3 (2-39)||(54706641-54706678)
chr3 (4-40)||(47733805-47733841)
chr3 (2-49)||(53155356-53155404)
chr3 (2-37)||(40013198-40013233)
chr3 (4-49)||(37451893-37451939)
chr3 (45-139)||(53293092-53293186)
chr3 (2-39)||(3961688-3961725)
chr3 (2-39)||(31270492-31270529)
chr3 (2-39)||(33637569-33637606)
chr3 (2-39)||(40883792-40883829)
chr3 (2-39)||(48652366-48652403)
chr3 (2-39)||(53402787-53402824)
chr3 (2-39)||(53962284-53962321)
chr3 (2-53)||(13701927-13701979)
chr3 (2-38)||(31462672-31462708)
[»] chr4 (37 HSPs)
chr4 (2-48)||(13586158-13586205)
chr4 (2-48)||(24825805-24825852)
chr4 (2-40)||(39523574-39523612)
chr4 (2-39)||(394192-394229)
chr4 (2-43)||(5814508-5814549)
chr4 (2-39)||(7861124-7861161)
chr4 (2-39)||(11210231-11210268)
chr4 (5-49)||(12717038-12717083)
chr4 (2-43)||(24100302-24100343)
chr4 (2-50)||(24789343-24789392)
chr4 (2-50)||(24818867-24818916)
chr4 (2-39)||(27394996-27395033)
chr4 (2-39)||(29268695-29268732)
chr4 (2-39)||(36124266-36124303)
chr4 (2-39)||(38944066-38944103)
chr4 (2-39)||(42197719-42197756)
chr4 (2-38)||(22757261-22757297)
chr4 (2-49)||(40198463-40198511)
chr4 (2-49)||(43278089-43278137)
chr4 (2-49)||(44756960-44757008)
chr4 (4-39)||(477932-477967)
chr4 (2-48)||(29922991-29923038)
chr4 (4-39)||(39837761-39837796)
chr4 (4-39)||(53647798-53647833)
chr4 (2-40)||(31522111-31522149)
chr4 (2-39)||(6882122-6882159)
chr4 (2-39)||(7060489-7060526)
chr4 (2-39)||(8712696-8712733)
chr4 (2-39)||(13965726-13965763)
chr4 (2-39)||(20399821-20399858)
chr4 (2-39)||(24568631-24568668)
chr4 (2-39)||(26742381-26742418)
chr4 (2-39)||(32616777-32616814)
chr4 (2-39)||(50801383-50801420)
chr4 (2-34)||(626468-626500)
chr4 (2-38)||(6911847-6911883)
chr4 (2-49)||(28837220-28837268)
[»] chr1 (27 HSPs)
chr1 (4-43)||(26097925-26097964)
chr1 (2-51)||(20411725-20411775)
chr1 (46-143)||(24114708-24114803)
chr1 (2-39)||(15391170-15391207)
chr1 (2-39)||(37822263-37822300)
chr1 (2-39)||(44517313-44517350)
chr1 (2-39)||(45750644-45750681)
chr1 (2-49)||(4882277-4882325)
chr1 (2-49)||(32784234-32784282)
chr1 (2-49)||(32878863-32878911)
chr1 (2-49)||(42491048-42491096)
chr1 (2-53)||(51418135-51418187)
chr1 (2-37)||(9298334-9298369)
chr1 (2-49)||(13869793-13869840)
chr1 (4-39)||(33486950-33486985)
chr1 (2-37)||(42276523-42276558)
chr1 (258-301)||(44608573-44608616)
chr1 (2-36)||(15791193-15791227)
chr1 (5-39)||(29205451-29205485)
chr1 (2-40)||(32301503-32301541)
chr1 (2-39)||(3232954-3232991)
chr1 (2-39)||(7995478-7995515)
chr1 (40-97)||(12539390-12539447)
chr1 (2-39)||(13488454-13488491)
chr1 (2-39)||(14265450-14265487)
chr1 (2-38)||(8737517-8737553)
chr1 (257-293)||(41941006-41941042)
[»] scaffold1350 (1 HSPs)
scaffold1350 (2-39)||(1740-1777)
[»] scaffold0432 (1 HSPs)
scaffold0432 (3-39)||(2339-2375)
[»] scaffold0027 (1 HSPs)
scaffold0027 (257-300)||(43826-43869)
[»] scaffold0121 (1 HSPs)
scaffold0121 (2-39)||(13163-13200)
[»] scaffold0155 (1 HSPs)
scaffold0155 (4-40)||(35249-35285)
[»] scaffold0154 (1 HSPs)
scaffold0154 (321-365)||(19335-19379)


Alignment Details
Target: chr6 (Bit Score: 316; Significance: 1e-178; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 1 - 372
Target Start/End: Complemental strand, 12156340 - 12155969
Alignment:
Q  1 gtctttcaacctgaatcaaataaataccgcactaagacgaaaatcaaaacaaatgaaagaatgttgaaaatatgtgtacgtcacttatttaactaaaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12156340 gtctttcaacctgaatcaaataaataccgcactaagacgaaaatcaaaagaaatgaaagaatgttgaaaatatgtgtacgtcacttatttaactaaaaac 12156241  T
Q  101 gaaggaaaaataatttgaatggatgattttgggtcaaaattgaaccaaaatacaacgcatttttaagatcttttttattatagatgattttgctaggatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  12156240 gaaggaaaaataatttgaatggatgattttgggtcaaaattgaaccaaaattcaacacatttttaagatcttttttattatagataattttgctaggatg 12156141  T
Q  201 tgattgtaatgcaggaagtgttcataagggtttgatattcgccaaggtggatatttttgaagtatgactcatatatagaagacattgaagaagacaaggg 300  Q
    ||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12156140 tgattgtaatgcaagaagtcttcataagggtttgatattcgctaagatggatatttttgaagtatgactcatatatagaagacattgaagaagacaaggc 12156041  T
Q  301 gtaatattgtaaactacatcatggtagtactatatatacagtttgcaacactgaaaccctaattcttctcac 372  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  12156040 gtaatattgtgaactacatcatgatagtactatatatacagtttgtaacactgaaatcctaattcttatcac 12155969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 23101326 - 23101378
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaaa 53  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  23101326 tctttcaacctgaatcaaataaataccgcacaaagacgggaaatcaaaacaaa 23101378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 31705368 - 31705320
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga-aaatcaaaa 49  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  31705368 tctttcaacctgaatcaaataaacaccgcactaagacgagaaatcaaaa 31705320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 1415476 - 1415541
Alignment:
Q  307 ttgtaaactacatcatggtagtactatatatacagtttgcaacactgaaaccctaattcttctcac 372  Q
    |||||||||  ||||| |||||||||||||||||  ||| |||| |||||||||||||||| ||||    
T  1415476 ttgtaaactgaatcatagtagtactatatatacaacttgtaacattgaaaccctaattcttatcac 1415541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 19402728 - 19402765
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  19402728 tctttcaacctgaatcaaataaacaccgcactaagacg 19402765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 23638038 - 23638075
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  23638038 tctttcaacctgaatcaaataaacaccgcactaagacg 23638075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 23654453 - 23654416
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  23654453 tctttcaacctgaatcaaataaacaccgcactaagacg 23654416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 31937338 - 31937375
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  31937338 tctttcaacctgaatcaaataaacaccgcactaagacg 31937375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 9627326 - 9627253
Alignment:
Q  297 aggggtaatattgtaaactacatcatggtagtactatatatacagtttgcaacactgaaaccctaattcttctcac 372  Q
    |||||||||||||||||||  ||| | ||||||||||||||   | ||| ||||||||||||||||||||| ||||    
T  9627326 aggggtaatattgtaaactgaatcgtagtagtactatatat--tgcttgtaacactgaaaccctaattcttatcac 9627253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 15590026 - 15590078
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaaa 53  Q
    ||||||||||||||||||||||| |||||| |||||| | |||||||||||||    
T  15590026 tctttcaacctgaatcaaataaacaccgcattaagacgggaaatcaaaacaaa 15590078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 35219833 - 35219868
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  35219833 tttcaacctgaatcaaataaacaccgcactaagacg 35219868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 29284956 - 29284918
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga 40  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  29284956 tctttcaacttgaatcaaataaacaccgcactaagacga 29284918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 1419094 - 1419143
Alignment:
Q  50 caaatgaaagaatgttgaaaatatgtgtacgtcacttatttaactaaaaa 99  Q
    ||||||||| ||| ||||||||||||| |  |||||||||||||||||||    
T  1419094 caaatgaaataatattgaaaatatgtgaaaatcacttatttaactaaaaa 1419143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 1915104 - 1915141
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  1915104 tctttcaacctgaatcaaataaacaccgtactaagacg 1915141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 2304756 - 2304793
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| || |||||||||||    
T  2304756 tctttcaacctgaatcaaataaacactgcactaagacg 2304793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 8693572 - 8693609
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| || |||||||||||    
T  8693572 tctttcaacctgaatcaaataaacactgcactaagacg 8693609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 12481288 - 12481325
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  12481288 tctttcaacctaaatcaaataaacaccgcactaagacg 12481325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 21507755 - 21507807
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaaa 53  Q
    ||||||||||||||||||| | | ||||||||||||| | |||||||||||||    
T  21507755 tctttcaacctgaatcaaaaacacaccgcactaagacgggaaatcaaaacaaa 21507807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 196 - 285
Target Start/End: Original strand, 32985710 - 32985799
Alignment:
Q  196 ggatgtgattgtaatgcaggaagtgttcataagggtttgatattcgccaaggtggatatttttgaagtatgactcatatatagaagacat 285  Q
    ||||||||| || ||||| ||||| ||| ||||| ||||||||||| ||| ||||| ||| |||||||| |||||||||||| |||||||    
T  32985710 ggatgtgatcgtcatgcatgaagtcttcgtaaggatttgatattcgtcaaagtggagattgttgaagtaggactcatatataaaagacat 32985799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 5754491 - 5754443
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga-aaatcaaaa 49  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  5754491 tctttcaacctgaatcaaataaacaccgcactaagacgagaaatcaaaa 5754443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 36868211 - 36868163
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga-aaatcaaaa 49  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  36868211 tctttcaacctgaatcaaataaacaccgcactaagacgagaaatcaaaa 36868163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 28413639 - 28413698
Alignment:
Q  84 cttatttaactaaaaacgaaggaaaaataatttgaatggatgattttgggtcaaaattga 143  Q
    |||||| ||||||||| ||| |||||| |||||||| ||||||| |||||||||||||||    
T  28413639 cttattcaactaaaaaagaaagaaaaacaatttgaagggatgatattgggtcaaaattga 28413698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 11581048 - 11581086
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga 40  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  11581048 tctttcaacctgaatcaaataaataccgcactaatacga 11581086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 4426576 - 4426613
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  4426576 tctttcaacctgaatcaaataaacaccgcactaagacg 4426613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 9978587 - 9978624
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  9978587 tctttcaacctgaatcaaataaacaccgcactaagacg 9978624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 10286925 - 10286962
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  10286925 tctttcaacctgaatcaaataaacaccgcactaagacg 10286962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 13740578 - 13740619
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacgaaaa 43  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  13740578 tctttcaacctgaatcaaataaacatcgcactaagacgaaaa 13740619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 22597338 - 22597301
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  22597338 tctttcaacctgaatcaaataaacaccgcactaagacg 22597301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 28231015 - 28231052
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  28231015 tctttcaacctgaatcaaataaacaccgcactaagacg 28231052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 28261806 - 28261843
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  28261806 tctttcaacctgaatcaaataaacaccgcactaagacg 28261843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 32314645 - 32314608
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  32314645 tctttcaacctgaatcaaataaacaccgcactaagacg 32314608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 34962994 - 34963031
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  34962994 tctttcaacctgaatcaaataaacaccgcactaagacg 34963031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 35333708 - 35333671
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  35333708 tctttcaacctgaatcaaataaacaccgcactaagacg 35333671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 43474046 - 43474083
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  43474046 tctttcaacctgaatcaaataaacaccgcactaagacg 43474083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 4739532 - 4739496
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac 38  Q
    ||||||||||||||||||||||| |||||||||||||    
T  4739532 tctttcaacctgaatcaaataaacaccgcactaagac 4739496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 12891036 - 12891084
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga-aaatcaaaa 49  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  12891036 tctttcaacctgaatcaaataaacaccgcactaggacgagaaatcaaaa 12891084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 33012251 - 33012199
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaaa 53  Q
    ||||||||||||||| ||||||| ||||||||||||| | |||||||||||||    
T  33012251 tctttcaacctgaattaaataaacaccgcactaagacgggaaatcaaaacaaa 33012199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 18089315 - 18089362
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacgaaaatcaaaa 49  Q
    ||||||||| ||||||||||||| |||||||||||||| |||| ||||    
T  18089315 tctttcaacttgaatcaaataaacaccgcactaagacggaaataaaaa 18089362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 20561050 - 20561085
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaaga 37  Q
    ||||||||||||||||||||||| ||||||||||||    
T  20561050 tctttcaacctgaatcaaataaacaccgcactaaga 20561085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 31908735 - 31908770
Alignment:
Q  3 ctttcaacctgaatcaaataaataccgcactaagac 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  31908735 ctttcaacctgaatcaaataaacaccgcactaagac 31908770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4604224 - 4604262
Alignment:
Q  1 gtctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  4604224 gtctttcaacctgaatcaaataaacaccacactaagacg 4604262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 43696069 - 43696035
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagac 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  43696069 tttcaacctgaatcaaataaacaccgcactaagac 43696035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 4732273 - 4732236
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  4732273 tctttcaacttgaatcaaataaacaccgcactaagacg 4732236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 9689903 - 9689940
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  9689903 tctttcaacctgaatcaaataaacaccgcactgagacg 9689940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 11798441 - 11798478
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  11798441 tctttcaacctgaatcaaataaacatcgcactaagacg 11798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 12704890 - 12704853
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  12704890 tctttcaacctaaatcaaataaacaccgcactaagacg 12704853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 27666413 - 27666376
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  27666413 tcttttaacctgaatcaaataaacaccgcactaagacg 27666376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 34471169 - 34471136
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaa 35  Q
    ||||||||| ||||||||||||||||||||||||    
T  34471169 tctttcaacatgaatcaaataaataccgcactaa 34471136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 38384375 - 38384412
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  38384375 tctttcaacctgaataaaataaacaccgcactaagacg 38384412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 38535223 - 38535260
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  38535223 tctttcaacctgaatcaaataaacaccgcactaggacg 38535260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 44942489 - 44942452
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  44942489 tctttcaagctgaatcaaataaacaccgcactaagacg 44942452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 6431320 - 6431368
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaaga-cgaaaatcaaaa 49  Q
    |||||||||||||||||||| || |||||||||||| || |||||||||    
T  6431320 tctttcaacctgaatcaaatcaacaccgcactaagatcggaaatcaaaa 6431368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 13548819 - 13548855
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac 38  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  13548819 tctttcaacctgaatcaaataaaaaccgcattaagac 13548855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 26254854 - 26254890
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac 38  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  26254854 tctttcaacctaaatcaaataaacaccgcactaagac 26254890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 27665712 - 27665616
Alignment:
Q  45 caaaacaaatgaaagaatgttgaaaatatgtgtacgtcacttatttaactaaaaacgaaggaaaaataatttgaatggatgattttgggtcaaaatt 141  Q
    |||||| || ||||||||||||||| |||||| |  | ||||||||||||||||  |||  ||||| || | |||| | ||||||| ||||||||||    
T  27665712 caaaaccaacgaaagaatgttgaaagtatgtgaaaataacttatttaactaaaagagaaataaaaacaagtcgaattggtgattttaggtcaaaatt 27665616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 34697149 - 34697233
Alignment:
Q  209 atgcaggaagtgttcataagggtttgatattcgccaaggtggatatttttgaagtatgactcatatatagaagacattgaagaag 293  Q
    ||||| ||||| |||||||  ||||||||||||||||||| || ||| |||||||| |||||||||||| ||||||  |||||||    
T  34697149 atgcatgaagtcttcataacagtttgatattcgccaaggtagagattgttgaagtacgactcatatatacaagacacagaagaag 34697233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 37128413 - 37128463
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaaca 51  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  37128413 tctttcaacctgaatcaaataaacaccgcactaagacggaaaatcaaaaca 37128463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 2968735 - 2968698
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2968735 tctttcaacctgaatcaaataaataccgcactaagacg 2968698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 22787695 - 22787647
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  22787695 tctttcaacctgaatcaaataaacaccgcactaagacggaaaatcaaaa 22787647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 24210444 - 24210408
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac 38  Q
    |||||||||||||||||||||||||||||||||||||    
T  24210444 tctttcaacctgaatcaaataaataccgcactaagac 24210408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 2234398 - 2234444
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  2234398 tttcaacctgaatcaaataaacaccgcactaagacggaaaatcaaaa 2234444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 14600624 - 14600662
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga 40  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  14600624 tctttcaacctgaatcaaataaacaccgcactaagacga 14600662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 977360 - 977244
Alignment:
Q  26 accgcactaagacgaaaatcaaaacaaatgaaagaatgttgaaaatatgtgtacgtcacttatttaactaaaaacgaaggaaaaataatttgaatggatg 125  Q
    ||||||| |||||| |||||||||||||  ||| ||   ||||||||  || |  ||||||||||||||||||| |||||||||| |||||| || |||     
T  977360 accgcacaaagacggaaatcaaaacaaacaaaaaaaaactgaaaatacatggaaatcacttatttaactaaaaaagaaggaaaaacaatttggat-gatt 977262  T
Q  126 attttgggtcaaaattga 143  Q
    ||||||  ||||||||||    
T  977261 attttgaatcaaaattga 977244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 7579781 - 7579818
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  7579781 tctttcaacctgaatcaaataaacaccgcactaagacg 7579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 43937103 - 43937140
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  43937103 tctttcaacctgaatcaaataaacaccgcactaagacg 43937140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 3204711 - 3204763
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga-aaatcaaaacaaa 53  Q
    ||||||||| ||||||||||||| || |||||||||||| |||||||||||||    
T  3204711 tctttcaacttgaatcaaataaacactgcactaagacgagaaatcaaaacaaa 3204763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 31407674 - 31407710
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac 38  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31407674 tctttcaacctgaatcaaataaacaccgcactaagac 31407710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 10633107 - 10633158
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaa 52  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||    
T  10633107 tctttcaacctgaataaaataaacaccgcactaagacggaaaatcaacacaa 10633158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 28297033 - 28297068
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaaga 37  Q
    ||||||||||||||||||||||| ||||||||||||    
T  28297033 tctttcaacctgaatcaaataaacaccgcactaaga 28297068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 19720212 - 19720174
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga 40  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  19720212 tctttcaacctgaatcaaataattaccgcattaagacga 19720174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 1039820 - 1039857
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  1039820 tctttcaacctggatcaaataaacaccgcactaagacg 1039857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 2025150 - 2025187
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  2025150 tctttcaatctgaatcaaataaacaccgcactaagacg 2025187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 4757368 - 4757331
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  4757368 tctttcaacctgaatcaaataaacatcgcactaagacg 4757331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 9501789 - 9501752
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  9501789 tctttcaacctgaatcaaataaacaccgcacaaagacg 9501752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 12832370 - 12832442
Alignment:
Q  46 aaaacaaatgaaagaatgttgaaaatatgtgtacgtcacttatttaactaaaaacgaaggaaaaataatttgaa 119  Q
    |||||||| ||||||   ||||||||||||| |  ||| ||||||||||||||| ||| |||||||||||||||    
T  12832370 aaaacaaacgaaagataattgaaaatatgtggaaatcaattatttaactaaaaa-gaaagaaaaataatttgaa 12832442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 14186940 - 14186895
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagacgaaaatcaaaa 49  Q
    ||||||||||||||||||||| |||||||||| ||  |||||||||    
T  14186940 tttcaacctgaatcaaataaagaccgcactaaaacagaaatcaaaa 14186895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 24700035 - 24700002
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaa 35  Q
    ||||||||||||||||||||||| ||||||||||    
T  24700035 tctttcaacctgaatcaaataaacaccgcactaa 24700002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 30026808 - 30026845
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  30026808 tctttcaacatgaatcaaataaacaccgcactaagacg 30026845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 37612856 - 37612819
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  37612856 tctttcaacttgaatcaaataaacaccgcactaagacg 37612819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 41361935 - 41361902
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaa 35  Q
    ||||||||||||||||||||||| ||||||||||    
T  41361935 tctttcaacctgaatcaaataaacaccgcactaa 41361902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 7763606 - 7763666
Alignment:
Q  81 tcacttatttaactaaaaacgaaggaaaaataatttgaatggatgattttgggtcaaaatt 141  Q
    |||||||||||||||||||  ||| ||||| |||| | | | |||||||||||||||||||    
T  7763606 tcacttatttaactaaaaagaaagaaaaaacaattcggaggaatgattttgggtcaaaatt 7763666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 10334377 - 10334341
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagacga 40  Q
    |||||| |||||||||||||| |||||||||||||||    
T  10334377 tttcaatctgaatcaaataaacaccgcactaagacga 10334341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 31202661 - 31202625
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac 38  Q
    ||||||||||||||||||||||| || ||||||||||    
T  31202661 tctttcaacctgaatcaaataaacactgcactaagac 31202625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000009; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 28664859 - 28664911
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaaa 53  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||||||||    
T  28664859 tctttcaacctgaatcaaataaacactgcactaagacggaaaatcaaaacaaa 28664911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 9719891 - 9719938
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaa 48  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  9719891 tctttcaacctgaatcaaataaacaccgcactaagacggaaaatcaaa 9719938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 11833221 - 11833183
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga 40  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  11833221 tctttcaacctgaatcaaataaacaccgcactaagacga 11833183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 48304311 - 48304349
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga 40  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  48304311 tctttcaacctgaatcaaataaacaccgcactaagacga 48304349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 1281055 - 1281092
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  1281055 tctttcaacctgaatcaaataaacaccgcactaagacg 1281092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 5238156 - 5238119
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  5238156 tctttcaacctgaatcaaataaataccgcaccaagacg 5238119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 10094644 - 10094607
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  10094644 tctttcaacctgaatcaaataaacaccgcactaagacg 10094607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 21603663 - 21603626
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  21603663 tctttcaacctgaatcaaataaacaccgcactaagacg 21603626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 24320141 - 24320178
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  24320141 tctttcaacctgaatcaaataaacaccgcactaagacg 24320178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 24988398 - 24988435
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  24988398 tctttcaacctgaatcaaataaacaccgcactaagacg 24988435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 36579259 - 36579312
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaaat 54  Q
    |||||||| |||||||||||||| ||||||||||||| | ||||||||||||||    
T  36579259 tctttcaatctgaatcaaataaacaccgcactaagacgggaaatcaaaacaaat 36579312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 9785520 - 9785472
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga-aaatcaaaa 49  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||||    
T  9785520 tctttcaacctgaatcaaataaacaccgcactaagatgagaaatcaaaa 9785472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 17509122 - 17509170
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||||||||    
T  17509122 tctttcaacctgaattaaataaacaccgcactaagacggaaaatcaaaa 17509170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 17544092 - 17544044
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||||||||    
T  17544092 tctttcaacctgaattaaataaacaccgcactaagacggaaaatcaaaa 17544044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 26161154 - 26161102
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaaa 53  Q
    |||||||||||||||||||| ||  |||||||||||| |||||||||||||||    
T  26161154 tctttcaacctgaatcaaatgaaccccgcactaagacagaaaatcaaaacaaa 26161102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 31703411 - 31703359
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaaa 53  Q
    |||||||| |||||||||||||||||  ||||||||| |||||||||||||||    
T  31703411 tctttcaatctgaatcaaataaatactacactaagacggaaaatcaaaacaaa 31703359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 45457474 - 45457522
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga-aaatcaaaa 49  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  45457474 tctttcaacctgaatcaaataaacaccgtactaagacgagaaatcaaaa 45457522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 3266589 - 3266542
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga-aaatcaaa 48  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  3266589 tctttcaacctgaatcaaataaacaccgtactaagacgagaaatcaaa 3266542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 41288159 - 41288112
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaa 48  Q
    ||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  41288159 tctttcaacctgaatcaaataaacaccgtactaagacggaaaatcaaa 41288112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 5948832 - 5948882
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaag-acgaaaatcaaaacaaa 53  Q
    ||||||||| ||||||||||||||| ||||||| | |||||||||||||||    
T  5948832 tttcaacctaaatcaaataaataccacactaagaaggaaaatcaaaacaaa 5948882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 4621285 - 4621318
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaa 35  Q
    ||||||||||||||||||||||| ||||||||||    
T  4621285 tctttcaacctgaatcaaataaacaccgcactaa 4621318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 21954736 - 21954777
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacgaaaa 43  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  21954736 tctttcaacctgaatcaaataaacacgacactaagacgaaaa 21954777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 21990865 - 21990828
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  21990865 tctttcaagctgaatcaaataaacaccgcactaagacg 21990828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 29352429 - 29352392
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  29352429 tctttcaacctgaatcaaataaacatcgcactaagacg 29352392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 45482267 - 45482230
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  45482267 tctttcaacctgaatcaaataaacatcgcactaagacg 45482230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 46025947 - 46025984
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  46025947 tctttcaacctaaatcaaataaacaccgcactaagacg 46025984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 17473670 - 17473722
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaaa 53  Q
    ||||||||||||||| ||||||| ||||||| ||||| | |||||||||||||    
T  17473670 tctttcaacctgaattaaataaacaccgcacaaagacgggaaatcaaaacaaa 17473722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 17579544 - 17579492
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaaa 53  Q
    ||||||||||||||| ||||||| ||||||| ||||| | |||||||||||||    
T  17579544 tctttcaacctgaattaaataaacaccgcacaaagacgggaaatcaaaacaaa 17579492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 42603687 - 42603719
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcacta 34  Q
    ||||||||||||||||||||||| |||||||||    
T  42603687 tctttcaacctgaatcaaataaacaccgcacta 42603719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 23882034 - 23882082
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  23882034 tctttcaacctgaatcaaataaacaccgcactaagactgaaaatcaaaa 23882082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 980947 - 980984
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  980947 tctttcaacctgaatcaaataaacaccgcactaagacg 980984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 11858113 - 11858076
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  11858113 tctttcaacctgaatcaaataaacaccgcactaagacg 11858076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 17331531 - 17331494
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  17331531 tctttcaacctgaatcaaataaacaccgcactaagacg 17331494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 26294977 - 26295022
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaa 48  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  26294977 tttcaacctgaatcaaataaacaccgcactaagacggaaaatcaaa 26295022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 33164386 - 33164423
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  33164386 tctttcaacctgaatcaaataaacaccgcactaagacg 33164423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43494064 - 43494015
Alignment:
Q  1 gtctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    |||||||||||||||||||||||| |||||||||| || |||||||||||    
T  43494064 gtctttcaacctgaatcaaataaacaccgcactaaaacggaaaatcaaaa 43494015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 12439581 - 12439633
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaaa 53  Q
    ||||||||||| ||||||||||| |||||||||| || |||||||||||||||    
T  12439581 tctttcaacctaaatcaaataaacaccgcactaaaacggaaaatcaaaacaaa 12439633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 23428455 - 23428407
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga-aaatcaaaa 49  Q
    |||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  23428455 tctttctacctgaatcaaataaacaccgcactaagacgagaaatcaaaa 23428407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 38755534 - 38755570
Alignment:
Q  257 ttgaagtatgactcatatatagaagacattgaagaag 293  Q
    |||||||||||||||||||||||||| ||||||||||    
T  38755534 ttgaagtatgactcatatatagaagatattgaagaag 38755570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 6635451 - 6635404
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaa 48  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  6635451 tctttcaacttgaatcaaataaacaccgcactaagacggaaaatcaaa 6635404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 29097990 - 29097955
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  29097990 tttcaacctgaatcaaataaacaccgcactaagacg 29097955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 25962122 - 25962084
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga 40  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  25962122 tctttcaacctgaatcaaataaacactgcactaagacga 25962084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 6281247 - 6281210
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  6281247 tctttcaacctgaatcaaataaacatcgcactaagacg 6281210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 11824899 - 11824960
Alignment:
Q  82 cacttatttaactaaaaacgaaggaaaaataatttgaatggatgattttgggtcaaaattga 143  Q
    ||||| |||||||||  | ||||||||||||||| | | |||||||||||| ||||||||||    
T  11824899 cacttgtttaactaatgaagaaggaaaaataattcggagggatgattttggatcaaaattga 11824960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 17096159 - 17096196
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  17096159 tctttcaacctgaatcaaataaacaccgtactaagacg 17096196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39179745 - 39179778
Alignment:
Q  1 gtctttcaacctgaatcaaataaataccgcacta 34  Q
    |||||||||||||||||||||||| |||||||||    
T  39179745 gtctttcaacctgaatcaaataaacaccgcacta 39179778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 7771739 - 7771787
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaaga-cgaaaatcaaaa 49  Q
    ||||||||| ||||||||||||| ||||||||||||  |||||||||||    
T  7771739 tctttcaacttgaatcaaataaacaccgcactaagatggaaaatcaaaa 7771787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 18573520 - 18573484
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagacga 40  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  18573520 tttcaacctgaatcaaataaacaccgcactaaaacga 18573484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 34431259 - 34431227
Alignment:
Q  6 tcaacctgaatcaaataaataccgcactaagac 38  Q
    ||||||||||||||||||| |||||||||||||    
T  34431259 tcaacctgaatcaaataaacaccgcactaagac 34431227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 22485168 - 22485120
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  22485168 tctttcaacctgaatcaaataaacaccgcactaagacggaaaatcaaaa 22485120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 55125546 - 55125467
Alignment:
Q  64 ttgaaaatatgtgtacgtcacttatttaactaaaaacgaaggaaaaataatttgaatggatgattttgggtcaaaattga 143  Q
    ||||||||||||| | |||| ||||||||||||||| ||| ||||||||||| | || | |||||||  |||||||||||    
T  55125546 ttgaaaatatgtggaagtcatttatttaactaaaaaagaaagaaaaataattcgtataggtgattttatgtcaaaattga 55125467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 55455068 - 55455021
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacgaaaatcaaaa 49  Q
    ||||||||||||||||||||||| |||||||||||||| |||| ||||    
T  55455068 tctttcaacctgaatcaaataaacaccgcactaagacggaaataaaaa 55455021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 11819286 - 11819249
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  11819286 tctttcaacctgaatcaaataaacaccgcactaagacg 11819249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 14585665 - 14585628
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  14585665 tctttcaacctgaatcaaataaacaccgcactaagacg 14585628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 35174911 - 35174874
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  35174911 tctttcaacctgaatcaaataaacaccgcactaagacg 35174874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 36624621 - 36624658
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  36624621 tctttcaacctgaatcaaataaacaccgcactaagacg 36624658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 49628021 - 49628058
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  49628021 tctttcaacctgaatcaaataaacaccgcactaagacg 49628058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 54706641 - 54706678
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  54706641 tctttcaacctgaatcaaataaacaccgcactaagacg 54706678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 47733805 - 47733841
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagacga 40  Q
    ||||||||||||||||||||| |||||||||||||||    
T  47733805 tttcaacctgaatcaaataaacaccgcactaagacga 47733841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 53155356 - 53155404
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||||    
T  53155356 tctttcaacctgaatcaaataaacactgcactaagacggaaaatcaaaa 53155404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 40013198 - 40013233
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaaga 37  Q
    ||||||||||||||||||||||| ||||||||||||    
T  40013198 tctttcaacctgaatcaaataaacaccgcactaaga 40013233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 37451939 - 37451893
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaaga-cgaaaatcaaaa 49  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||    
T  37451939 tttcaacctgaatcaaataaacaccgcactaagatggaaaatcaaaa 37451893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 53293186 - 53293092
Alignment:
Q  45 caaaacaaatgaaagaatgttgaaaatatgtgtacgtcacttatttaactaaaaacgaaggaaaaataatttgaatggatgattttgggtcaaaa 139  Q
    |||||||||||||||||  |  |||||| ||| |  ||||||| ||||||||||| |||||||||| |||||| |  |||||||| || ||||||    
T  53293186 caaaacaaatgaaagaagatgaaaaatacgtgaaaatcacttacttaactaaaaaagaaggaaaaacaatttggagtgatgatttcggatcaaaa 53293092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 3961688 - 3961725
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  3961688 tcttacaacctgaatcaaataaacaccgcactaagacg 3961725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 31270529 - 31270492
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  31270529 tctttcaacctgaatcgaataaacaccgcactaagacg 31270492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 33637606 - 33637569
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  33637606 tctttcaacctaaatcaaataaacaccgcactaagacg 33637569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 40883792 - 40883829
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  40883792 tctttcaacctgaatcaaagaaacaccgcactaagacg 40883829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 48652366 - 48652403
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  48652366 tctttcaacctaaatcaaataaacaccgcactaagacg 48652403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 53402824 - 53402787
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  53402824 tctttcaacctgaatcaaataaacagcgcactaagacg 53402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 53962321 - 53962284
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  53962321 tcttttaacctgaatcaaataaacaccgcactaagacg 53962284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 13701927 - 13701979
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaaa 53  Q
    ||||||||| ||||||||||||| ||||||||| ||| | |||||||||||||    
T  13701927 tctttcaacttgaatcaaataaacaccgcactaggacgggaaatcaaaacaaa 13701979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 31462672 - 31462708
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac 38  Q
    |||||||||||||||||||||||  ||||||||||||    
T  31462672 tctttcaacctgaatcaaataaacgccgcactaagac 31462708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 13586158 - 13586205
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaa 48  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  13586158 tctttcaacctgaatcaaataaacaccgcactaagacggaaaatcaaa 13586205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 24825852 - 24825805
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaa 48  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  24825852 tctttcaacctgaatcaaataaagaccgcactaagacggaaaatcaaa 24825805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 39523612 - 39523574
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga 40  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  39523612 tctttcaacctgaatcaaataaacaccgcactaagacga 39523574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 394192 - 394229
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  394192 tctttcaacctgaatcaaataaacaccgcactaagacg 394229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 5814549 - 5814508
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacgaaaa 43  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  5814549 tctttcaacctgaatcaaataaacactgcactaagacgaaaa 5814508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 7861124 - 7861161
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  7861124 tctttcaacctgaatcaaataaacaccgcactaagacg 7861161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 11210231 - 11210268
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  11210231 tctttcaacctgaatcaaataaacaccgcactaagacg 11210268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 12717038 - 12717083
Alignment:
Q  5 ttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||    
T  12717038 ttcaacctgaatcaaataaacaccgcactaagacggaaaatcaaaa 12717083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 24100343 - 24100302
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacgaaaa 43  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  24100343 tctttcaacctgaatcaaataaacaccacactaagacgaaaa 24100302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 24789392 - 24789343
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga-aaatcaaaac 50  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  24789392 tctttcaacctgaatcaaataaacactgcactaagacgagaaatcaaaac 24789343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 24818867 - 24818916
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga-aaatcaaaac 50  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  24818867 tctttcaacctgaatcaaataaacactgcactaagacgagaaatcaaaac 24818916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 27395033 - 27394996
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  27395033 tctttcaacctgaatcaaataaacaccgcactaagacg 27394996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 29268695 - 29268732
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  29268695 tctttcaacctgaatcaaataaacaccgcactaagacg 29268732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 36124266 - 36124303
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  36124266 tctttcaacctgaatcaaataaacaccgcactaagacg 36124303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 38944066 - 38944103
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  38944066 tctttcaacctgaatcaaataaacaccgcactaagacg 38944103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 42197756 - 42197719
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  42197756 tctttcaacctgaatcaaataaacaccgcactaagacg 42197719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 22757297 - 22757261
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac 38  Q
    ||||||||||||||||||||||| |||||||||||||    
T  22757297 tctttcaacctgaatcaaataaacaccgcactaagac 22757261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 40198463 - 40198511
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga-aaatcaaaa 49  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  40198463 tctttcaacctgaatcaaataaacaccacactaagacgagaaatcaaaa 40198511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 43278137 - 43278089
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||||||    
T  43278137 tcttccaacctgaatcaaataaacaccgcactaagacggaaaatcaaaa 43278089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 44756960 - 44757008
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaaga-cgaaaatcaaaa 49  Q
    ||||||||||||||||||||||| ||||||||||||  |||||||||||    
T  44756960 tctttcaacctgaatcaaataaacaccgcactaagatggaaaatcaaaa 44757008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 477932 - 477967
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  477932 tttcaacctgaatcaaataaacaccgcactaagacg 477967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 29923038 - 29922991
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaa 48  Q
    ||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  29923038 tctttcaacctgaatcaaataaacaccgtactaagacggaaaatcaaa 29922991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 39837796 - 39837761
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  39837796 tttcaacctgaatcaaataaacaccgcactaagacg 39837761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 53647833 - 53647798
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  53647833 tttcaacctgaatcaaataaacaccgcactaagacg 53647798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 31522149 - 31522111
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga 40  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  31522149 tctttcaacctgaatcaaataaacactgcactaagacga 31522111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 6882159 - 6882122
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  6882159 tctttcaacctgaatcaaataaacaccgcattaagacg 6882122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 7060526 - 7060489
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  7060526 tctttcaacctgaatcaaataaacaccgcattaagacg 7060489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 8712733 - 8712696
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  8712733 tctttcaacctgaatcaaataaacatcgcactaagacg 8712696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 13965763 - 13965726
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  13965763 tctttcaacctaaatcaaataaacaccgcactaagacg 13965726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 20399821 - 20399858
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  20399821 tctttcaaactgaatcaaataaacaccgcactaagacg 20399858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 24568631 - 24568668
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  24568631 tctttcaacctgaatcaaataaacaccccactaagacg 24568668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 26742381 - 26742418
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  26742381 tctttcaatctgaatcaaataaacaccgcactaagacg 26742418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 32616777 - 32616814
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  32616777 tctttcaacttgaatcaaataaacaccgcactaagacg 32616814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 50801420 - 50801383
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| || |||||||||||    
T  50801420 tctttcaacctgaatcaaataaacacagcactaagacg 50801383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 626468 - 626500
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcacta 34  Q
    ||||||||||||||||||||||| |||||||||    
T  626468 tctttcaacctgaatcaaataaacaccgcacta 626500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 6911883 - 6911847
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac 38  Q
    ||||||||||||||||||||||| || ||||||||||    
T  6911883 tctttcaacctgaatcaaataaacactgcactaagac 6911847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 28837268 - 28837220
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    ||||||||| ||||| ||||||| ||||||||||||| |||||||||||    
T  28837268 tctttcaacgtgaattaaataaacaccgcactaagacagaaaatcaaaa 28837220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 26097925 - 26097964
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagacgaaaa 43  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  26097925 tttcaacctgaatcaaataaataccgtactaagacgaaaa 26097964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 20411775 - 20411725
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaaca 51  Q
    ||||||||||||||||||||||| ||||||||||||| | |||||||||||    
T  20411775 tctttcaacctgaatcaaataaacaccgcactaagacgggaaatcaaaaca 20411725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 24114708 - 24114803
Alignment:
Q  46 aaaacaaatgaaagaatgttgaaaatatgtgtacgtcacttatttaactaaaaacgaaggaaaaataatttgaatggatgattttgggtcaaaattga 143  Q
    ||||||||| ||| ||| ||||||||||||  |  ||||||||||||||||||| ||| |||||| |||||| |  | |||||||||||| |||||||    
T  24114708 aaaacaaataaaataatattgaaaatatgttaaaatcacttatttaactaaaaaagaaagaaaaacaatttgga--ggtgattttgggtcgaaattga 24114803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 15391170 - 15391207
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  15391170 tctttcaacctgaatcaaataaacaccgcactaagacg 15391207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 37822263 - 37822300
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    |||||||||||||||||||||||||| |||||||||||    
T  37822263 tctttcaacctgaatcaaataaatactgcactaagacg 37822300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 44517350 - 44517313
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  44517350 tctttcaacctgaatcaaataaacaccgcactaagacg 44517313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 45750681 - 45750644
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  45750681 tctttcaacctgaatcaaataaacaccgcactaagacg 45750644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 4882277 - 4882325
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  4882277 tctttcaacttgaatcaaataaacaccgcactaagacagaaaatcaaaa 4882325  T

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Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 32784282 - 32784234
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    ||||||| ||||||||||||||| ||||||||||||| |||||||||||    
T  32784282 tctttcagcctgaatcaaataaacaccgcactaagacggaaaatcaaaa 32784234  T

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Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 32878911 - 32878863
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaa 49  Q
    ||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  32878911 tctttcaacctgaatcaaataaacaccgtactaagacggaaaatcaaaa 32878863  T

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Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 42491096 - 42491048
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga-aaatcaaaa 49  Q
    |||||||| |||||||||||||| ||||||||||||||| |||||||||    
T  42491096 tctttcaatctgaatcaaataaacaccgcactaagacgagaaatcaaaa 42491048  T

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Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 51418187 - 51418135
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac-gaaaatcaaaacaaa 53  Q
    |||||| |||||||||||||||| ||||||| ||||| |||||||||||||||    
T  51418187 tctttccacctgaatcaaataaacaccgcacaaagacggaaaatcaaaacaaa 51418135  T

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Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 9298334 - 9298369
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaaga 37  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9298334 tctttcaacctgaatcaaataaacaccgcactaaga 9298369  T

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Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 13869840 - 13869793
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacgaaaatcaaaa 49  Q
    ||||||||||| ||||||||||| |||||||||||||| |||| ||||    
T  13869840 tctttcaacctaaatcaaataaacaccgcactaagacggaaataaaaa 13869793  T

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Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 33486950 - 33486985
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  33486950 tttcaacctgaatcaaataaacaccgcactaagacg 33486985  T

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Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 42276558 - 42276523
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaaga 37  Q
    ||||||||||||||||||||||| ||||||||||||    
T  42276558 tctttcaacctgaatcaaataaacaccgcactaaga 42276523  T

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Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 301
Target Start/End: Complemental strand, 44608616 - 44608573
Alignment:
Q  258 tgaagtatgactcatatatagaagacattgaagaagacaagggg 301  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||    
T  44608616 tgaagtatggctcatatatagaagacactgaagaagtcaagggg 44608573  T

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Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 15791193 - 15791227
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaag 36  Q
    ||||||||||||||||||||||| |||||||||||    
T  15791193 tctttcaacctgaatcaaataaacaccgcactaag 15791227  T

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Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 29205485 - 29205451
Alignment:
Q  5 ttcaacctgaatcaaataaataccgcactaagacg 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  29205485 ttcaacctgaatcaaataaacaccgcactaagacg 29205451  T

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Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 32301541 - 32301503
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacga 40  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  32301541 tctttcaacctgaatcaaataaacaccgcattaagacga 32301503  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 3232991 - 3232954
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  3232991 tctttcaacctgaatcaaataaacatcgcactaagacg 3232954  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 7995478 - 7995515
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  7995478 tctttcaacctgaatcaaataaacaccacactaagacg 7995515  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 12539390 - 12539447
Alignment:
Q  40 aaaatcaaaacaaatgaaagaatgttgaaaatatgtgtacgtcacttatttaactaaa 97  Q
    |||||||||| ||||||||||| | |||||||||||| |  ||| |||||||||||||    
T  12539390 aaaatcaaaataaatgaaagaaggctgaaaatatgtggaaatcatttatttaactaaa 12539447  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 13488454 - 13488491
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  13488454 tctttcaacctgaattaaataaacaccgcactaagacg 13488491  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 14265487 - 14265450
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  14265487 tctttcaacctgaatcaaataaacatcgcactaagacg 14265450  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 8737553 - 8737517
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagac 38  Q
    ||||||||||||||||||||||| || ||||||||||    
T  8737553 tctttcaacctgaatcaaataaacactgcactaagac 8737517  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 41941006 - 41941042
Alignment:
Q  257 ttgaagtatgactcatatatagaagacattgaagaag 293  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  41941006 ttgaagtatgactcatatatacaagacattaaagaag 41941042  T

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Target: scaffold1350 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 1777 - 1740
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  1777 tctttcaacctgaatcaaataaacaccgcactaagacg 1740  T

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Target: scaffold0432 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 2339 - 2375
Alignment:
Q  3 ctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    |||||||||||||||||||||| ||||||||||||||    
T  2339 ctttcaacctgaatcaaataaacaccgcactaagacg 2375  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 43869 - 43826
Alignment:
Q  257 ttgaagtatgactcatatatagaagacattgaagaagacaaggg 300  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||    
T  43869 ttgaaatatgactcatatatagaagatattgaagaaggcaaggg 43826  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 13163 - 13200
Alignment:
Q  2 tctttcaacctgaatcaaataaataccgcactaagacg 39  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  13163 tctttcaacctgaatcaaataaacacctcactaagacg 13200  T

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Target: scaffold0155 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 35285 - 35249
Alignment:
Q  4 tttcaacctgaatcaaataaataccgcactaagacga 40  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  35285 tttcaacctaaatcaaataaacaccgcactaagacga 35249  T

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Target: scaffold0154 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 19335 - 19379
Alignment:
Q  321 atggtagtactatatatacagtttgcaacactgaaaccctaattc 365  Q
    ||||||||||||||||||  ||||| |||| ||||||||||||||    
T  19335 atggtagtactatatatattgtttgtaacagtgaaaccctaattc 19379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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