View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14794_low_8 (Length: 375)
Name: NF14794_low_8
Description: NF14794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14794_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 22 - 364
Target Start/End: Original strand, 42150340 - 42150682
Alignment:
| Q |
22 |
aatttaatgtaacaggctttaatataatatatgaaaatctagagcacttacttaggcaacccatatacttgacagcgcaatcattttcaaacaagtggat |
121 |
Q |
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| T |
42150340 |
aatttaatgtaacaggctataataaaatatatgagaatctagagcacttacttaggcaacccaaatacttgacagcgcaatcattttcaaacaagtggat |
42150439 |
T |
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| Q |
122 |
atcagctcatggtgcacatatcacaaaaagaataagaagaataaataccagacatgttttctatggatttaactcttctaaagtgagaagttcatttgaa |
221 |
Q |
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| T |
42150440 |
atcagctcatggtgcacatatcacaaaaagaataagaagaataaataccagacatgttttctatggatttaactcttctaaagtgagaagttcatttgaa |
42150539 |
T |
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| Q |
222 |
gacatagagttaccaatttaaattgttgattgaatgggtgataatgtgataaaatacatatgcatttatagccaaaatcatgtagtaaaatctatcatcc |
321 |
Q |
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| T |
42150540 |
gacatagagttaccaatttaaattgttgattgaatgggtgataatgtgataaaatacatatgcatttatagccaaaatcatgtagtaaaatctatcatcc |
42150639 |
T |
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| Q |
322 |
tcaacatcaaagaaagaaaaaatctatcatcctcttcatttca |
364 |
Q |
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| T |
42150640 |
tcaacatcaaagaaagaaaaaatctatcatcctcttcttttca |
42150682 |
T |
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