View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14796_high_4 (Length: 458)

Name: NF14796_high_4
Description: NF14796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14796_high_4
NF14796_high_4
[»] chr3 (37 HSPs)
chr3 (184-458)||(41707054-41707331)
chr3 (184-458)||(8363960-8364237)
chr3 (183-458)||(46791696-46791974)
chr3 (181-458)||(29387753-29388033)
chr3 (184-458)||(51939555-51939831)
chr3 (185-458)||(28132734-28133010)
chr3 (184-452)||(23067730-23068001)
chr3 (184-458)||(52655122-52655399)
chr3 (184-458)||(21784783-21785059)
chr3 (190-458)||(18407986-18408256)
chr3 (183-458)||(24252406-24252685)
chr3 (184-458)||(27729768-27730043)
chr3 (19-183)||(42117753-42117920)
chr3 (191-457)||(23164572-23164839)
chr3 (184-383)||(27110882-27111082)
chr3 (190-403)||(6715245-6715458)
chr3 (254-458)||(54430412-54430617)
chr3 (254-458)||(25599085-25599291)
chr3 (194-321)||(51064299-51064426)
chr3 (245-458)||(13401311-13401524)
chr3 (184-458)||(48627028-48627288)
chr3 (256-458)||(40152128-40152332)
chr3 (315-457)||(7766983-7767127)
chr3 (341-458)||(21596282-21596400)
chr3 (343-457)||(42009262-42009377)
chr3 (396-457)||(27303189-27303251)
chr3 (396-457)||(36538186-36538248)
chr3 (396-457)||(46904744-46904806)
chr3 (396-457)||(50677314-50677376)
chr3 (380-436)||(1649853-1649909)
chr3 (346-453)||(19965884-19965992)
chr3 (350-450)||(1255057-1255158)
chr3 (323-457)||(51146867-51147001)
chr3 (343-436)||(43905865-43905958)
chr3 (396-458)||(4207357-4207416)
chr3 (397-458)||(20762052-20762114)
chr3 (254-298)||(43905976-43906020)
[»] chr8 (32 HSPs)
chr8 (189-458)||(7857880-7858150)
chr8 (181-458)||(18420608-18420890)
chr8 (184-458)||(13585089-13585364)
chr8 (190-458)||(43968069-43968339)
chr8 (184-458)||(43926322-43926599)
chr8 (184-458)||(44665045-44665317)
chr8 (184-458)||(3471382-3471665)
chr8 (190-452)||(42951774-42952044)
chr8 (184-374)||(3445472-3445661)
chr8 (184-458)||(34523950-34524210)
chr8 (254-457)||(32098178-32098383)
chr8 (183-458)||(27074373-27074639)
chr8 (295-458)||(18112011-18112181)
chr8 (188-458)||(5869321-5869586)
chr8 (183-296)||(18111602-18111717)
chr8 (265-337)||(1003958-1004032)
chr8 (315-457)||(3628747-3628889)
chr8 (254-337)||(41666058-41666141)
chr8 (380-457)||(23567274-23567352)
chr8 (396-458)||(12531561-12531624)
chr8 (380-457)||(39697938-39698016)
chr8 (392-458)||(1004056-1004124)
chr8 (309-457)||(35874840-35874990)
chr8 (343-458)||(30915286-30915403)
chr8 (396-458)||(29372359-29372422)
chr8 (396-450)||(42076110-42076165)
chr8 (253-303)||(12531432-12531482)
chr8 (183-231)||(1003901-1003949)
chr8 (396-458)||(5971759-5971818)
chr8 (253-303)||(39698079-39698130)
chr8 (254-300)||(23567418-23567464)
chr8 (341-422)||(2545957-2546037)
[»] chr7 (38 HSPs)
chr7 (193-458)||(46221702-46221969)
chr7 (189-458)||(8358293-8358564)
chr7 (201-457)||(18015582-18015839)
chr7 (183-458)||(33419116-33419393)
chr7 (184-458)||(33909855-33910129)
chr7 (184-452)||(42161125-42161398)
chr7 (184-458)||(36796371-36796645)
chr7 (222-458)||(4099794-4100033)
chr7 (241-458)||(11672429-11672651)
chr7 (186-458)||(44894028-44894306)
chr7 (185-458)||(6380083-6380359)
chr7 (182-363)||(38524971-38525154)
chr7 (190-380)||(12251466-12251657)
chr7 (254-458)||(7636325-7636536)
chr7 (183-458)||(26282541-26282802)
chr7 (190-458)||(40001695-40001948)
chr7 (289-457)||(32956670-32956839)
chr7 (256-458)||(26633227-26633428)
chr7 (183-279)||(27432380-27432476)
chr7 (368-458)||(773883-773974)
chr7 (188-447)||(25061697-25061957)
chr7 (280-458)||(41908064-41908243)
chr7 (381-458)||(12251287-12251365)
chr7 (309-454)||(30739038-30739184)
chr7 (191-458)||(1365821-1366074)
chr7 (341-457)||(36438351-36438468)
chr7 (183-247)||(44877006-44877070)
chr7 (341-454)||(40737994-40738108)
chr7 (341-457)||(9479074-9479191)
chr7 (395-457)||(18895397-18895460)
chr7 (397-455)||(42312012-42312071)
chr7 (214-455)||(40841247-40841491)
chr7 (254-303)||(25609964-25610014)
chr7 (182-218)||(11672387-11672423)
chr7 (183-218)||(4099740-4099775)
chr7 (396-458)||(44876154-44876217)
chr7 (396-457)||(7366689-7366751)
chr7 (399-458)||(3799759-3799819)
[»] chr4 (30 HSPs)
chr4 (184-458)||(32130789-32131065)
chr4 (183-458)||(28463587-28463865)
chr4 (183-458)||(53011503-53011777)
chr4 (184-458)||(19661169-19661444)
chr4 (195-458)||(11681741-11682008)
chr4 (195-458)||(11690020-11690287)
chr4 (183-425)||(21168844-21169088)
chr4 (185-458)||(41038038-41038315)
chr4 (184-458)||(44477827-44478104)
chr4 (183-458)||(23426165-23426436)
chr4 (188-458)||(27632194-27632463)
chr4 (195-458)||(23256394-23256659)
chr4 (183-458)||(29221620-29221900)
chr4 (298-436)||(16072498-16072636)
chr4 (184-304)||(39372815-39372936)
chr4 (341-458)||(29579827-29579945)
chr4 (184-458)||(45172644-45172903)
chr4 (292-458)||(21791546-21791712)
chr4 (184-457)||(34982029-34982288)
chr4 (341-457)||(35653980-35654097)
chr4 (309-457)||(43154788-43154936)
chr4 (184-337)||(51066707-51066862)
chr4 (341-458)||(5545276-5545394)
chr4 (309-457)||(22423600-22423748)
chr4 (309-457)||(24449040-24449190)
chr4 (396-458)||(55134210-55134273)
chr4 (203-312)||(29579655-29579766)
chr4 (380-458)||(10575522-10575601)
chr4 (286-337)||(48512342-48512393)
chr4 (256-425)||(26329065-26329233)
[»] chr2 (35 HSPs)
chr2 (188-458)||(19367418-19367690)
chr2 (184-458)||(26151746-26152022)
chr2 (192-458)||(18676310-18676579)
chr2 (184-457)||(13020210-13020487)
chr2 (182-458)||(42411557-42411835)
chr2 (192-458)||(25222119-25222388)
chr2 (183-458)||(41096537-41096816)
chr2 (184-458)||(45618765-45619041)
chr2 (183-458)||(7993421-7993697)
chr2 (191-458)||(6530455-6530724)
chr2 (184-458)||(42759755-42760023)
chr2 (181-415)||(36481191-36481425)
chr2 (183-458)||(4855777-4856058)
chr2 (195-458)||(45042187-45042457)
chr2 (187-458)||(2063600-2063870)
chr2 (248-458)||(12269279-12269489)
chr2 (298-458)||(34061855-34062015)
chr2 (184-457)||(15457306-15457564)
chr2 (185-458)||(18172939-18173197)
chr2 (309-457)||(39081314-39081462)
chr2 (341-457)||(21747230-21747347)
chr2 (315-457)||(1418832-1418973)
chr2 (341-458)||(27302527-27302645)
chr2 (184-458)||(18916053-18916313)
chr2 (275-458)||(36059904-36060087)
chr2 (266-455)||(31273168-31273357)
chr2 (380-458)||(38985708-38985787)
chr2 (396-457)||(13997316-13997378)
chr2 (396-457)||(38599404-38599466)
chr2 (412-458)||(17117644-17117691)
chr2 (256-458)||(1226265-1226465)
chr2 (184-303)||(17117778-17117896)
chr2 (396-457)||(29480637-29480699)
chr2 (254-303)||(38985849-38985899)
chr2 (390-457)||(18482506-18482575)
[»] chr6 (30 HSPs)
chr6 (188-458)||(6360554-6360824)
chr6 (195-457)||(2618155-2618419)
chr6 (184-458)||(3514849-3515127)
chr6 (190-458)||(6754001-6754271)
chr6 (184-458)||(29400929-29401205)
chr6 (193-458)||(7525165-7525434)
chr6 (206-458)||(57498-57753)
chr6 (287-458)||(12614715-12614885)
chr6 (190-395)||(24455014-24455220)
chr6 (184-373)||(31258543-31258734)
chr6 (310-458)||(29149316-29149468)
chr6 (300-458)||(628094-628254)
chr6 (184-276)||(12622144-12622236)
chr6 (343-457)||(3748568-3748683)
chr6 (287-458)||(30915365-30915539)
chr6 (184-458)||(31860806-31861066)
chr6 (350-458)||(1690632-1690741)
chr6 (396-457)||(21946109-21946171)
chr6 (366-458)||(14893416-14893509)
chr6 (309-458)||(19231529-19231677)
chr6 (183-458)||(29308466-29308727)
chr6 (193-303)||(1093181-1093290)
chr6 (373-458)||(22503725-22503808)
chr6 (396-436)||(31234913-31234953)
chr6 (396-458)||(1093040-1093102)
chr6 (183-303)||(1690774-1690894)
chr6 (398-457)||(15035784-15035840)
chr6 (399-436)||(32056065-32056102)
chr6 (419-458)||(6294279-6294319)
chr6 (396-436)||(31244050-31244089)
[»] chr1 (40 HSPs)
chr1 (188-458)||(12884136-12884409)
chr1 (184-457)||(51110101-51110378)
chr1 (185-458)||(14084700-14084975)
chr1 (189-458)||(48722369-48722643)
chr1 (187-458)||(50552285-50552560)
chr1 (182-458)||(17487282-17487563)
chr1 (183-458)||(33124629-33124909)
chr1 (184-457)||(18127937-18128215)
chr1 (189-458)||(10109511-10109785)
chr1 (266-458)||(30899526-30899721)
chr1 (184-458)||(6150494-6150786)
chr1 (185-457)||(20905287-20905564)
chr1 (184-373)||(20470516-20470706)
chr1 (184-458)||(52055338-52055617)
chr1 (215-458)||(29208097-29208341)
chr1 (254-458)||(27703528-27703737)
chr1 (241-458)||(25930448-25930669)
chr1 (254-458)||(30004906-30005108)
chr1 (188-458)||(6333515-6333787)
chr1 (188-458)||(12971214-12971471)
chr1 (341-458)||(50371081-50371199)
chr1 (214-400)||(28189211-28189403)
chr1 (354-458)||(28885670-28885775)
chr1 (309-458)||(5560399-5560548)
chr1 (182-316)||(2021942-2022076)
chr1 (322-457)||(37873762-37873898)
chr1 (341-452)||(44836726-44836838)
chr1 (389-458)||(2-72)
chr1 (396-457)||(17674354-17674416)
chr1 (183-458)||(1269347-1269616)
chr1 (395-457)||(13120866-13120929)
chr1 (396-457)||(22386837-22386899)
chr1 (341-457)||(42740057-42740174)
chr1 (296-457)||(15441193-15441355)
chr1 (396-457)||(24556808-24556870)
chr1 (287-450)||(3907366-3907528)
chr1 (361-458)||(9777380-9777479)
chr1 (394-436)||(32810373-32810415)
chr1 (184-296)||(28886140-28886253)
chr1 (309-416)||(26486407-26486513)
[»] scaffold0126 (1 HSPs)
scaffold0126 (184-454)||(16493-16771)
[»] chr5 (37 HSPs)
chr5 (195-458)||(13474427-13474695)
chr5 (183-458)||(13423648-13423929)
chr5 (184-458)||(26377773-26378052)
chr5 (220-458)||(13656033-13656275)
chr5 (186-454)||(36718570-36718841)
chr5 (194-457)||(12661102-12661373)
chr5 (182-402)||(8398766-8398989)
chr5 (183-458)||(19099313-19099592)
chr5 (241-417)||(26311851-26312029)
chr5 (184-458)||(43511423-43511683)
chr5 (184-458)||(4734581-4734840)
chr5 (184-458)||(10591272-10591529)
chr5 (341-457)||(138091-138208)
chr5 (323-458)||(29156120-29156255)
chr5 (183-458)||(20975788-20976050)
chr5 (380-458)||(42291880-42291959)
chr5 (341-458)||(17513935-17514053)
chr5 (227-448)||(27351179-27351404)
chr5 (395-457)||(18873458-18873521)
chr5 (341-458)||(931327-931440)
chr5 (292-458)||(40956217-40956378)
chr5 (403-458)||(3349728-3349784)
chr5 (396-458)||(5829387-5829448)
chr5 (287-417)||(8379562-8379691)
chr5 (341-453)||(10033493-10033607)
chr5 (397-457)||(17325847-17325909)
chr5 (192-303)||(42292022-42292131)
chr5 (398-457)||(7390400-7390460)
chr5 (254-299)||(17514092-17514138)
chr5 (397-458)||(33281677-33281739)
chr5 (274-436)||(23069099-23069262)
chr5 (380-436)||(37029054-37029108)
chr5 (403-457)||(16515533-16515588)
chr5 (254-303)||(29156062-29156113)
chr5 (224-331)||(40778675-40778785)
chr5 (341-458)||(40779139-40779256)
chr5 (255-303)||(3349869-3349917)
[»] scaffold0181 (2 HSPs)
scaffold0181 (283-458)||(17131-17307)
scaffold0181 (183-291)||(18128-18238)
[»] scaffold0035 (1 HSPs)
scaffold0035 (183-375)||(22846-23041)
[»] scaffold0100 (1 HSPs)
scaffold0100 (203-458)||(46172-46429)
[»] scaffold0564 (2 HSPs)
scaffold0564 (300-409)||(979-1088)
scaffold0564 (419-458)||(1086-1126)
[»] scaffold0606 (1 HSPs)
scaffold0606 (380-453)||(8399-8473)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 41707331 - 41707054
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 281  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||  | |    
T  41707331 caggcccagccttgagggtgtgcaaggtgttcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatttaatacccaccccccact 41707232  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 381  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||    
T  41707231 taaataaaaaatatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcct 41707132  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41707131 atcaaaccacccctaatttgcataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 41707054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 184 - 458
Target Start/End: Original strand, 8363960 - 8364237
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 281  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||  | |    
T  8363960 caggcccggccttgagggtgtgcaaggtgctcaaccaggccgggcctccaattgctacgggcctctaacgaaaaattaaatctaatatccaccccccact 8364059  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 381  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||| ||||| ||||||||| ||||||||||||||    
T  8364060 taaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagtttttttctagactcttgttctcctttttgtacataaatcggatcct 8364159  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  8364160 atcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatc 8364237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 183 - 458
Target Start/End: Complemental strand, 46791974 - 46791696
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 280  Q
    |||||||| ||||||||||||||||||||| | ||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |     
T  46791974 tcaggccccgccttgagggtgtgcaaggtgcttaactaagtcgggcctccaaatgctacggacctctaacgaaaaattaaatctaatacccaccccccac 46791875  T
Q  281 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 380  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||    
T  46791874 ttaaataaaaaatatatatgttataacattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcc 46791775  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||    
T  46791774 tatcaaaccacctctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgcaagaatcacaacaatc 46791696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 181 - 458
Target Start/End: Complemental strand, 29388033 - 29387753
Alignment:
Q  181 cttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-- 278  Q
    ||||||| | ||||||||| |||||||||||| ||||| ||||||| ||| |||||| |||| || ||||||||||||||||||||||||||||||||      
T  29388033 cttcaggtctggccttgagtgtgtgcaaggtgctcaaccaggccggaccttcaaatgctacgagcttctaacgaaaaattaaatctaatacccacccccc 29387934  T
Q  279 atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggat 378  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||| ||||||||| |||||||||||    
T  29387933 acttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaatcggat 29387834  T
Q  379 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  29387833 cctatcaaaccacccctaatttgtataatcacttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatc 29387753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 51939831 - 51939555
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 281  Q
    |||||||| |||||||||||||||||||| ||||| |||| ||||||||||||  || ||||||||||| |||||||||||||||||||||||||  | |    
T  51939831 caggcccgaccttgagggtgtgcaaggtgctcaaccaggcggggcctccaaattctatgggcctctaacaaaaaattaaatctaatacccaccccccact 51939732  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 381  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||   ||||||||||||||||  |||||||| ||||||| ||||||    
T  51939731 taaataaaaaatatatatgttatatccttttctttctttagtccacgtttgagttttt-tctagactctagttctcttttttgtacataaatcagatcct 51939633  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  51939632 atcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 51939555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 185 - 458
Target Start/End: Complemental strand, 28133010 - 28132734
Alignment:
Q  185 aggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--attt 282  Q
    ||||| ||| |||||||||||||||||| ||||| ||  ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||  ||||    
T  28133010 aggccaggctttgagggtgtgcaaggtgctcaaccagatcgggccttcaaatgttacgggcctttaacgaaaaattaaatataatacccaccccccattt 28132911  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    || |||||||||||||||||||||||||||||||||||||||||| |||||| ||   |||||||||||||||| ||||||||| ||||||| |||||||    
T  28132910 aactaaaaaatatatatgttatatcattttctttctttagtacacatttgagattttttctagactctagttctcctttttgtacataaatcagatccta 28132811  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  28132810 tcaaatcacccttaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatc 28132734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 184 - 452
Target Start/End: Complemental strand, 23068001 - 23067730
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca-ccccattt 282  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||| |||||||||||||||||||| ||||||||| ||||||||    
T  23068001 caggcccggccttgagggtgtgcaaggtgctcaaccaggccgggcctccaattgctacggacctctaacgaaaaattaaatttaatacccacccccattt 23067902  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgag-tttaaatctagactctagttcttctttttgtatataaatcggatcct 381  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||   |||||||| ||||||| ||||||||| ||||||||||||||    
T  23067901 aaataaaatatatatatgttatatcattttctttctttagtacacgtttgagttttttttctagactttagttctcctttttgtacataaatcggatcct 23067802  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 452  Q
    |||||| |||||||||||||||||||||||| | |||||||||||||||| || |||||| |||||||||||    
T  23067801 atcaaaccacccctaatttgtataatcacttcaccagtcaatttgaaaagttatttcatttaaagaatcaca 23067730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 52655399 - 52655122
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatt-- 281  Q
    |||||||| |||||||||||||||||||| | ||| |||||||||||| |||||||| ||||||||||| |||||||||||||||| |||||||| |       
T  52655399 caggcccgaccttgagggtgtgcaaggtgcttaaccaggccgggcctc-aaatgttatgggcctctaac-aaaaattaaatctaatccccaccccctaca 52655302  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacac--gtttgagtttaaatctagactctagttcttctttttgtatataaatcggatc 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||   |||||||||||||||| ||||||||||||||||||||||    
T  52655301 taaataaaaaatatatatgttatatcattttctttctttagtacacacgtttgagtttttctctagactctagttctcctttttgtatataaatcggatc 52655202  T
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  52655201 ctatcaaaccaccactaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatc 52655122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 21785059 - 21784783
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 282  Q
    |||||||||| |||||||||||||||||| | ||| ||||||||||||| |||| |||||| |||||||||||||||||||||||||  |||||| | ||    
T  21785059 caggcccggctttgagggtgtgcaaggtgcttaaccaggccgggcctcccaatgctacgggtctctaacgaaaaattaaatctaatattcacccccactt 21784960  T
Q  283 aaataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 381  Q
    |||||||||| |||||||||||||| | ||| ||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||    
T  21784959 aaataaaaaaatatatatgttatataactttatttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatcct 21784861  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  21784860 atcaaaccacccctaatttgtataatcacttaatcagttaatttggaaagctatttcattgaaagaatcacaacaatc 21784783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 190 - 458
Target Start/End: Original strand, 18407986 - 18408256
Alignment:
Q  190 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaata 287  Q
    |||| ||| ||||||| |||||| |||| |||||||||||| ||| || |||||  || |||||||||||||||| |||||||||||  ||| |||||||    
T  18407986 cggctttgtgggtgtgtaaggtgttcaattaggccgggccttcaattgctacggatctttaacgaaaaattaaatataatacccaccttccacttaaata 18408085  T
Q  288 aaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaa 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||  |||||||| ||||||||||||||||||||    
T  18408086 aaaaatatatatgttatatcattttctttctttagtacacgtttgagttttt-tctagactttagttctcatttttgtacataaatcggatcctatcaaa 18408184  T
Q  388 tcacccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcacaacaatc 458  Q
     ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  18408185 ccacccctaatttgtataatcacttaatcagtcaatttgaaaagctaatccattgaaagaatcacaacaatc 18408256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 183 - 458
Target Start/End: Original strand, 24252406 - 24252685
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 280  Q
    |||| |||| ||||||||||||| |||||| ||||| || |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||  |     
T  24252406 tcagacccgaccttgagggtgtgtaaggtgctcaaccagaccgggcctccaaatgttacgggcctctaactaaaaattagatctaatacccacccccgac 24252505  T
Q  281 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat--ctagactctagttcttctttttgtatataaatcggat 378  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||   |  ||||||||||||||||||||||||| |||| || |||    
T  24252506 ttaagtaaaaaatatatatgttatatctttttctttctttagtacacgtttgagtttttttttctagactctagttcttctttttgtacataa-tcagat 24252604  T
Q  379 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| |||| || |||| || ||||||||||||||||    
T  24252605 cctatcaaaccacccttaatttgtataatcacttaatcagtcaatttggaaagttatttcagtgcaagaatcacaacaatc 24252685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 27730043 - 27729768
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccattta 283  Q
    ||||||| || ||||| ||||||||| || ||||  ||| ||| |||||||||| |||||||||||||||||||||||||| ||||||  |||||| |||    
T  27730043 caggcccagctttgagagtgtgcaagatgctcaatcaggtcggacctccaaatggtacgggcctctaacgaaaaattaaatataatacgtaccccactta 27729944  T
Q  284 aataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctat 383  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||   | |||||||||||||| ||||||||| |||||||||||| |||    
T  27729943 aataaaaaatatatatgttatatcattttctttcattagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcttat 27729844  T
Q  384 caaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||| |||||||||||||||||||||| |||||| |||||||| ||||| | || || ||||||||||||||||||    
T  27729843 caaaccacccctaatttgtataatcacataatcaatcaatttggaaagcaatttgatcgaaagaatcacaacaatc 27729768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 19 - 183
Target Start/End: Original strand, 42117753 - 42117920
Alignment:
Q  19 gacaccagcggacgacggtcggctgagcttttccatctttgggttgcttctgattgttgat---ttttggcccaaaacagatagtgtccatcccctaatg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||   ||||||||||||||||||||||||||||||||||||    
T  42117753 gacaccagcggacgacggtcggctgagcttttccatctttgggttgcttcggattgatgatgatttttggcccaaaacagatagtgtccatcccctaatg 42117852  T
Q  116 aatgtcattatgtggaaaatagtgcagtaagctagtctctccgacgtaaatggccgactgattagctt 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42117853 aatgtcattatgtggaaaatagtgcagtaagctagtctctccgacgtaaatggccgactgattagctt 42117920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 191 - 457
Target Start/End: Complemental strand, 23164839 - 23164572
Alignment:
Q  191 ggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataa 288  Q
    ||||||| ||| |||||||||| ||||| ||| ||||||||||||||  | ||||||| ||| ||||||||  |||||||||||||||  | ||||||||    
T  23164839 ggccttgggggagtgcaaggtgttcaaccaggtcgggcctccaaatgccatgggcctcaaacaaaaaattatgtctaatacccacccctcacttaaataa 23164740  T
Q  289 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaat 388  Q
    |||| |||||||||||||| |||||||| || |||||||||||||||||   |||||||||||||||| ||||||||| ||||||| ||||||||||||     
T  23164739 aaaa-atatatgttatatccttttcttttttcagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatctgatcctatcaaac 23164642  T
Q  389 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||||||||||||||||||||||||| |||||||| ||  ||| |||||||||||||||||||||||    
T  23164641 cacccctaatttgtataatcacttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaat 23164572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 184 - 383
Target Start/End: Complemental strand, 27111082 - 27110882
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--t 281  Q
    |||||||||||||||||||||| |||||| ||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |  |    
T  27111082 caggcccggccttgagggtgtg-aaggtgctcaaccaggcggggcctccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccctact 27110984  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 381  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||  |||||||| |||||||| |||||    
T  27110983 taaataaaaaatatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagttctcatttttgtacataaatcgtatcct 27110884  T
Q  382 at 383  Q
    ||    
T  27110883 at 27110882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 190 - 403
Target Start/End: Original strand, 6715245 - 6715458
Alignment:
Q  190 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaata 287  Q
    ||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||  |||||||||||    
T  6715245 cggccttgagggtgtgcaaggtgctcaaccaggccgagcctctaaatgttacgggcctctaacgaaaaattaaatttaatacccaccctccatttaaata 6715344  T
Q  288 aaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaa 387  Q
    |||||||||||||||||||| || | | | |||| ||||||||||| |||   |||||||||||||||| ||||||||||||||||||||||||||||||    
T  6715345 aaaaatatatatgttatatctttatatct-tttaatacacgtttga-tttttttctagactctagttctcctttttgtatataaatcggatcctatcaaa 6715442  T
Q  388 tcacccctaatttgta 403  Q
     ||||  |||||||||    
T  6715443 ccacctataatttgta 6715458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 254 - 458
Target Start/End: Original strand, 54430412 - 54430617
Alignment:
Q  254 aaaaattaaatctaatacccacc--ccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactcta 351  Q
    ||||||||| |||||||||||||  ||| |||||||||||| |||| ||||||||| |||||||| ||  ||||||||||||||||   ||||| |||||    
T  54430412 aaaaattaagtctaatacccacctcccacttaaataaaaaa-atatgtgttatatccttttcttttttcggtacacgtttgagttttt-tctaggctcta 54430509  T
Q  352 gttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatca 450  Q
    ||||| ||||||||| ||||||| |||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||      
T  54430510 gttctcctttttgtacataaatctgatgttatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagttatttcattaaaagaattg 54430609  T
Q  451 caacaatc 458  Q
    ||||||||    
T  54430610 caacaatc 54430617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 254 - 458
Target Start/End: Complemental strand, 25599291 - 25599085
Alignment:
Q  254 aaaaattaaatctaatacccaccc--catttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatct-agactct 350  Q
    ||||||||| ||||||| | ||||  || |||||||||||| ||||  |||||||  ||||||||||| |||||| ||||||||||   | | |||||||    
T  25599291 aaaaattaagtctaatatctaccctccacttaaataaaaaaaatat--gttatattcttttctttcttcagtacaggtttgagttttttttttagactct 25599194  T
Q  351 agttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatc 449  Q
    |||||| ||||||||| ||||||| ||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  25599193 agttctcctttttgtacataaatctgattctatcaaaccacctctaatttatataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatc 25599094  T
Q  450 acaacaatc 458  Q
    |||||||||    
T  25599093 acaacaatc 25599085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 51064299 - 51064426
Alignment:
Q  194 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaaaat 293  Q
    ||||||||||||||||||| ||||  ||||||||| |||||||  ||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  51064299 cttgagggtgtgcaaggtgttcaatcaggccgggcttccaaatactacggacctctaacgaaaaattaaatctaatacccattccacttaaataaaaaat 51064398  T
Q  294 atatatgttatatcattttctttcttta 321  Q
    |||||||||||||| |||||||||||||    
T  51064399 atatatgttatatctttttctttcttta 51064426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 245 - 458
Target Start/End: Original strand, 13401311 - 13401524
Alignment:
Q  245 cctctaacgaaaaattaaatctaatacccaccc--catttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatc 342  Q
    |||| ||| |||| |||| | ||||||||||||  || |||||||||||| || ||||  ||||| |||||||| ||  || |||||| ||||||   ||    
T  13401311 cctcgaacaaaaatttaagtttaatacccaccctacacttaaataaaaaaaatgtatg--atatccttttcttttttcggtccacgtt-gagtttttttc 13401407  T
Q  343 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattg 441  Q
    || ||||||||||| ||||||||| ||| ||  |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| |||||||    
T  13401408 taaactctagttctcctttttgtacatacattcgatcctatcaaaccactcttaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 13401507  T
Q  442 aaagaatcacaacaatc 458  Q
     ||||||||||||||||    
T  13401508 gaagaatcacaacaatc 13401524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 48627288 - 48627028
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 282  Q
    |||||||| ||||||||| |||||||||| ||||  | |||||||||||||| | || |||||||  |  ||||||||| ||||||||||||||| | ||    
T  48627288 caggcccgaccttgagggggtgcaaggtgctcaatcaagccgggcctccaaaagctatgggcctcata--aaaaattaactctaatacccacccccactt 48627191  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    |||||||||||||||||||||           |||||||   |||||||||||||   |||||||| |||||||  | | || | ||||||| ||| |||    
T  48627190 aaataaaaaatatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctcatatctggacataaatctgatacta 48627105  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||| | |||| | ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  48627104 tcagaccaccgccaatttgtataatcacttgatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatc 48627028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 256 - 458
Target Start/End: Complemental strand, 40152332 - 40152128
Alignment:
Q  256 aaattaaatctaatacc-caccccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagtt 354  Q
    ||||||| ||||||||  ||| ||||||||| |||||| ||||||||||  || |||| ||||||  ||||||||||||||||   | ||||||||| ||    
T  40152332 aaattaagtctaatacaacactccatttaaacaaaaaaaatatatgttacttctttttttttcttcggtacacgtttgagttttttt-tagactctaatt 40152234  T
Q  355 cttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaa-gaatcaca 452  Q
    |||||||||  | ||| ||| ||| ||| ||||||| ||| ||||||||||||||||||||| ||||||||||||| ||| |||||| ||| ||||||||    
T  40152233 cttctttttagacatagatctgatgctaccaaatcatccccaatttgtataatcacttaatcggtcaatttgaaaaactatttcattaaaacgaatcaca 40152134  T
Q  453 acaatc 458  Q
    ||||||    
T  40152133 acaatc 40152128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 315 - 457
Target Start/End: Original strand, 7766983 - 7767127
Alignment:
Q  315 ttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcactta 413  Q
    ||||||||||||||| |||||||   | |||||||| |||||| |||| || | ||||||  ||| ||||||||  |||   ||||||||||||||||||    
T  7766983 ttctttagtacacgtatgagttttttttctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcactta 7767082  T
Q  414 atcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  7767083 atcagtcaatttgaaaagctatttcattgaaagaatcacaacaat 7767127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 341 - 458
Target Start/End: Original strand, 21596282 - 21596400
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 439  Q
    ||||||||||| |||| |||| || | ||||||| ||| |||||||| ||| || ||||||||||||||||||||||||| ||||| ||||||| |||||    
T  21596282 tctagactctaattctcctttctggacataaatcagatgctatcaaaccactcccaatttgtataatcacttaatcagtcgatttggaaagctatttcat 21596381  T
Q  440 tgaaagaatcacaacaatc 458  Q
    |  ||||||||||||||||    
T  21596382 tacaagaatcacaacaatc 21596400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 457
Target Start/End: Complemental strand, 42009377 - 42009262
Alignment:
Q  343 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattg 441  Q
    |||||| ||||||| |||| || | ||||||  ||| |||||||| ||||   |||||||||||||||||||||||||||||| ||||| || |||||||    
T  42009377 tagactttagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaagttatttcattg 42009278  T
Q  442 aaagaatcacaacaat 457  Q
    ||||||||||||||||    
T  42009277 aaagaatcacaacaat 42009262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 396 - 457
Target Start/End: Original strand, 27303189 - 27303251
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  27303189 aatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaat 27303251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 396 - 457
Target Start/End: Complemental strand, 36538248 - 36538186
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  36538248 aatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaat 36538186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 457
Target Start/End: Original strand, 46904744 - 46904806
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  46904744 aatttgtataatcacttaatcagtcaatttaaaaaactatttcattgaaagaatcacaacaat 46904806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 457
Target Start/End: Complemental strand, 50677376 - 50677314
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  50677376 aatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaacaatcacaacaat 50677314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 1649909 - 1649853
Alignment:
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 436  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||    
T  1649909 ctatcaaatcacccccaatttgtataatcacttaatcattcaatttgaaaatctatt 1649853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 453
Target Start/End: Complemental strand, 19965992 - 19965884
Alignment:
Q  346 actctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaa 444  Q
    |||||| |||| ||||||| | ||||||| ||| |||||||| |||  | |||||||||||||||||||| ||| || ||||||||||| |||||| |||    
T  19965992 actctaattctcctttttggacataaatctgatgctatcaaaccactgccaatttgtataatcacttaattagttaaattgaaaagctatttcattaaaa 19965893  T
Q  445 gaatcacaa 453  Q
    |||||||||    
T  19965892 gaatcacaa 19965884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 450
Target Start/End: Complemental strand, 1255158 - 1255057
Alignment:
Q  350 tagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaat 448  Q
    ||||||||||||||| | ||||||| ||| ||||||||  |||  ||||||||||||| |||||||| ||||||||  |||| || ||||||||||||||    
T  1255158 tagttcttctttttggacataaatctgatgctatcaaacgacctttaatttgtataatgacttaatcggtcaatttagaaagttatttcattgaaagaat 1255059  T
Q  449 ca 450  Q
    ||    
T  1255058 ca 1255057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 457
Target Start/End: Original strand, 51146867 - 51147001
Alignment:
Q  323 tacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 422  Q
    ||||||| |||||||   |||||| ||||||||  ||||||| | ||||||  ||| |||| ||| ||||   |||||| ||| ||||||||||||||||    
T  51146867 tacacgtatgagtttttttctagattctagttccactttttggacataaatttgatgctattaaaccaccatcaatttgaata-tcacttaatcagtcaa 51146965  T
Q  423 tttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||| |||| ||| || ||||||||||||||||||||    
T  51146966 tttaaaaaactattttattgaaagaatcacaacaat 51147001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 436
Target Start/End: Complemental strand, 43905958 - 43905865
Alignment:
Q  343 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 436  Q
    |||||| ||||||| || | || | ||||||| | | ||||||||  ||||  |||||||||||||||| ||||||||||||||||||| ||||    
T  43905958 tagactttagttctcctatctggacataaatctggtactatcaaactaccctcaatttgtataatcactcaatcagtcaatttgaaaagttatt 43905865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 4207416 - 4207357
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagctattcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||||||||| |||||||| |||| |||   || |||||||||||||||||    
T  4207416 aatttgtataatcacttaatcattcaatttggaaagatat---ttcaaagaatcacaacaatc 4207357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 20762052 - 20762114
Alignment:
Q  397 atttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||| |||||| |||||| ||  ||| |||||||||||||||| |||||||    
T  20762052 atttgtataatcacttgatcagttaatttggaagtctatttcattgaaagaatcataacaatc 20762114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 43906020 - 43905976
Alignment:
Q  254 aaaaattaaatctaatacccaccccatttaaataaaaaatatata 298  Q
    ||||||||| |||| || |||||||| ||||||||||||||||||    
T  43906020 aaaaattaactctattatccaccccacttaaataaaaaatatata 43905976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 189 - 458
Target Start/End: Original strand, 7857880 - 7858150
Alignment:
Q  189 ccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataa 288  Q
    |||||||||||||||||||||||| ||||| ||| ||||||||||| || ||||||| |||||||||||||||||| |||||||||||||| ||||||||    
T  7857880 ccggccttgagggtgtgcaaggtgctcaaccaggtcgggcctccaattgctacgggcttctaacgaaaaattaaatttaatacccaccccacttaaataa 7857979  T
Q  289 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaat 388  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||| | |||||||||||||||||||||    
T  7857980 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgaacataaatcggatcctatcaaat 7858079  T
Q  389 cacccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||||||||||||||||||||||||| |||| | ||||||| |||||||||||||||||    
T  7858080 cacccctaatttgtataatcacttaatcagtcaatttggaaagttaattcatttaaagaatcacaacaatc 7858150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 181 - 458
Target Start/End: Complemental strand, 18420890 - 18420608
Alignment:
Q  181 cttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc--c 278  Q
    ||||||||| |||||||| ||||||||||||  ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||  |    
T  18420890 cttcaggcctggccttgatggtgtgcaaggttttcaactaggtcgggcctccaaatgttacgggcttctaacgaaaaattaaatctaatacccaccctcc 18420791  T
Q  279 atttaaataaaaaatatatat--gttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcgg 376  Q
    | |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||   || ||||||||||||| ||||||||| ||||||| |    
T  18420790 acttaaataaaaaatatatatatgttatatcattttctttctttagtacacgtttgagtttttttccagactctagttctcctttttgtacataaatcag 18420691  T
Q  377 atcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcacaacaatc 458  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  18420690 atcctatcaaaccacacttaatttgtataatcacttaatcagtcaatttgaaaagctgtttcattgaaagaatcacaacaatc 18420608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 184 - 458
Target Start/End: Original strand, 13585089 - 13585364
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 281  Q
    |||||||| |||| ||||||||||||||| ||||  || |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||  |||    
T  13585089 caggcccgaccttaagggtgtgcaaggtgctcaatcagaccgggccttcaaatgcaacgggcctctaacgaaaaattaaatctaatacccaccccccatt 13585188  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 381  Q
    ||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |  |||||||| ||||||| ||||||    
T  13585189 taactaaaaaatat--atgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttttcttttttgtacataaatcagatcct 13585286  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  13585287 atcaaaccacccctaatttgtataatcaattaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatc 13585364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 190 - 458
Target Start/End: Complemental strand, 43968339 - 43968069
Alignment:
Q  190 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatt-taaataa 288  Q
    |||| ||||| |||||||||||| ||||  |||  |||||||||||| |||| |||||||||||||||||||||||||||||||||||||   | |||||    
T  43968339 cggctttgagagtgtgcaaggtgctcaatcaggttgggcctccaaatattacaggcctctaacgaaaaattaaatctaatacccaccccacacttaataa 43968240  T
Q  289 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaat 388  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||||||||     
T  43968239 aaaaaatatatgttatatccttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaac 43968140  T
Q  389 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||| ||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  43968139 cactcctaatttgtataatcacttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatc 43968069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 43926599 - 43926322
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatt 281  Q
    ||||||||||||||||||||||||||||| ||||  ||| |||| |||||||||  |||||||||||| |||||||||||| |||||||||||  ||| |    
T  43926599 caggcccggccttgagggtgtgcaaggtgctcaatcaggtcgggtctccaaatgccacgggcctctaaggaaaaattaaatttaatacccacctcccact 43926500  T
Q  282 taaataaaaaatatatatgttatatcattttctttc-tttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatc 379  Q
    ||||||||||||||||||||||||||  ||| | || ||||||||||||||||||||   | ||||||||||||||| ||||||||||||||||||||||    
T  43926499 taaataaaaaatatatatgttatatc--tttatatcatttagtacacgtttgagttttttttctagactctagttctactttttgtatataaatcggatc 43926402  T
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43926401 ctatcaaaccacccataatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 43926322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 44665317 - 44665045
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 281  Q
    |||||||| ||||||||||||| |||||| ||||  | |||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||  | |    
T  44665317 caggcccgaccttgagggtgtgtaaggtgctcaatcaagccgggcctccaaatgctacgggcctctaacgcataattaaatctaatacccacccctcact 44665218  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatc-tagactctagttcttctttttgtatataaatcggatcc 380  Q
    ||||||||||||||||  |||||||| |||||||||||    ||||||||||||||   |  |||||||||||||| ||||||||| |||||||||||||    
T  44665217 taaataaaaaatatat--gttatatctttttctttctt----acacgtttgagttttttttatagactctagttctcctttttgtacataaatcggatcc 44665124  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||| |||| ||||||||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||||||||    
T  44665123 tatcaaaccacctctaatttgtatcatcacttaatcagtctatttggaaagttatttcattgaaagaatcacaacaatc 44665045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 184 - 458
Target Start/End: Original strand, 3471382 - 3471665
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 281  Q
    |||||||||||||| ||| ||||||| || ||||| ||| ||| |||||||||| |||||||||| ||| ||||||||| | |||||||||||||  | |    
T  3471382 caggcccggccttgggggagtgcaagatgctcaaccaggtcggacctccaaatgctacgggcctcaaacaaaaaattaagtgtaatacccaccccccact 3471481  T
Q  282 taaataaaaaatata-tatgttatatcattttctttctttagtacacgtttgagtttaaat-----ctagactctagttcttctttttgtatataaatcg 375  Q
    ||||||||||| | | ||||||||||||||||||||||| ||||||| |||||||||   |     ||||| |||||||||  |||||||| ||||||      
T  3471482 taaataaaaaaaaaaatatgttatatcattttctttcttcagtacacatttgagttttttttctttctagaatctagttctcatttttgtacataaatgt 3471581  T
Q  376 gatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3471582 gattctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 3471665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 190 - 452
Target Start/End: Complemental strand, 42952044 - 42951774
Alignment:
Q  190 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaata 287  Q
    ||||||||||||||||||||||| || |  ||  ||| | || ||||| || |||| |||| |||||||||||||||||||||||||||  | |||||||    
T  42952044 cggccttgagggtgtgcaaggtgctcgatcagttcggacttctaaatgctatgggcttctagcgaaaaattaaatctaatacccaccccccacttaaata 42951945  T
Q  288 aaaaata-tatatgttatatcattttctttctttagtacacgtttgagtttaaat----ctagactctagttcttctttttgtatataaatcggatccta 382  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||   |    |||||||||||||||  |||||||| |||||||| ||||||    
T  42951944 aaaaaaaatatatgttatatcattttctttctttagtacacgtttgagttttttttcttctagactctagttctcatttttgtacataaatcgaatccta 42951845  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 452  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||    
T  42951844 tcaaaccactcctaatttgtataatcacttaatcagtcaatttgaaaagttattttattgaaagaatcaca 42951774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 184 - 374
Target Start/End: Original strand, 3445472 - 3445661
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 282  Q
    |||||||||| |||||||||||||||||| ||||  || ||||| || |||||| ||||||  ||||||||| |||||||||||||||||||||| | ||    
T  3445472 caggcccggc-ttgagggtgtgcaaggtgctcaatgagaccgggtcttcaaatgctacgggtttctaacgaagaattaaatctaatacccacccccactt 3445570  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatc 374  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||   | |||||||||||||| ||||||||| |||||||    
T  3445571 aaataaaaaatatatatgttatatctttttctttctttagtacacgtttgaattt-tttttagactctagttctcctttttgtacataaatc 3445661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 34524210 - 34523950
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 282  Q
    |||||||||||||||||| |||||||||| ||||  | ||||| |||||||| | ||||||||||  |  ||||||||||||||||||||||||| | ||    
T  34524210 caggcccggccttgagggagtgcaaggtgctcaatcaagccggacctccaaaagctacgggcctcaga--aaaaattaaatctaatacccacccccactt 34524113  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    |||||||||||||||||||||           |||||||   |||||||||||||   |||||||| ||||||| || | || | ||||||| | | |||    
T  34524112 aaataaaaaatatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctcctatctggacataaatctggtacta 34524027  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34524026 tcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 34523950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 254 - 457
Target Start/End: Complemental strand, 32098383 - 32098178
Alignment:
Q  254 aaaaattaaatctaatacccacccc--atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactcta 351  Q
    ||||||||| |||||||||||||||  | |||| ||||||||||||||||||  || ||||||||||| |||||||||||||||||   |||||||||||    
T  32098383 aaaaattaagtctaatacccaccccccacttaattaaaaaatatatatgttacttctttttctttcttcagtacacgtttgagttttt-tctagactcta 32098285  T
Q  352 gttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatca 450  Q
    ||| | ||||||| | ||||||  ||| |||||||| ||| | |||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||||||    
T  32098284 gttatcctttttggacataaatttgatgctatcaaaccactcttaatttgtatgatcacttaatcagtcaatttggaaaactatttcattgaaagaatca 32098185  T
Q  451 caacaat 457  Q
    |||||||    
T  32098184 caacaat 32098178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 183 - 458
Target Start/End: Original strand, 27074373 - 27074639
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat-- 280  Q
    ||||||||||||||||||| ||||||| || |||| |||  ||||||| ||||||  | || |||| ||| ||||||||| |||||||| ||| || |      
T  27074373 tcaggcccggccttgagggagtgcaagatgctcaattagatcgggccttcaaatgcaatggacctcaaacaaaaaattaagtctaatactcactccctac 27074472  T
Q  281 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 380  Q
    |||||||||||| |||||||||||||||||||||||||| | ||| |           | ||   |||||||| || ||||||||| ||||||| |||||    
T  27074473 ttaaataaaaaa-atatatgttatatcattttctttcttcaatactc-----------actccctactctagtactcctttttgtacataaatctgatcc 27074560  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||  ||| |||||||||| |||||||||||||    
T  27074561 tatcaaaccacccctaatttgtataatcacttaatcagtcaatttaaaagtctatttcattgaaaaaatcacaacaatc 27074639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 295 - 458
Target Start/End: Original strand, 18112011 - 18112181
Alignment:
Q  295 tatatgttatatcattttctttctttagtacacgtttgagtttaaat------ctagactctagttcttctttttgtatataaatcggatcctatcaaat 388  Q
    |||||||||||||||||||||||||||||| ||||||||||||   |      ||||| |||||||||  ||| |||| |||||||||||| |||||||     
T  18112011 tatatgttatatcattttctttctttagtatacgtttgagtttttttttctttctagaatctagttctcttttatgtacataaatcggatcatatcaaac 18112110  T
Q  389 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||| |||||||||||||||||||||||||||||||||| ||| ||| || |||||||||||||||||||||    
T  18112111 cactcctaatttgtataatcacttaatcagtcaatttggaaaactattttattgaaagaatcacaacaatc 18112181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 458
Target Start/End: Complemental strand, 5869586 - 5869321
Alignment:
Q  188 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc-catttaaat 286  Q
    |||||| ||||||| |||||||||| || || |||||||||||||||||| ||| |||||  ||   |||||||  |||||||||||||| | | |||||    
T  5869586 cccggctttgagggagtgcaaggtgctctaccaggccgggcctccaaatggtactggcctaaaa---aaaattatgtctaatacccaccctcgtctaaat 5869490  T
Q  287 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 386  Q
    |||||| | ||||||||  |  |||||||| || |||||||| ||||||||   | |||||| ||||||| |||| |||| |||||| | || |||||||    
T  5869489 aaaaaaaa-atatgttacttatttttctttattcagtacacgattgagttttttt-tagactttagttctcctttctgtacataaattg-atactatcaa 5869393  T
Q  387 atcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    | |||| | ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5869392 accaccac-aatttttaaaatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 5869321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 18111602 - 18111717
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccat 280  Q
    |||||||||||||||||||||||||||||| ||||  ||| ||| |||||||||| || ||| ||||| ||||||||||||||||| |||||||  | |     
T  18111602 tcaggcccggccttgagggtgtgcaaggtgctcaatcaggtcggacctccaaatgctatgggtctctatcgaaaaattaaatctaacacccaccctcaac 18111701  T
Q  281 ttaaataaaaaatata 296  Q
    ||||||||||||||||    
T  18111702 ttaaataaaaaatata 18111717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 1003958 - 1004032
Alignment:
Q  265 ctaatacccacccc--atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttt 337  Q
    ||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1003958 ctaatacccaccccccacttaaataaaaaatatatatgttatatcattttctttctttagtacatgtttgagttt 1004032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 315 - 457
Target Start/End: Complemental strand, 3628889 - 3628747
Alignment:
Q  315 ttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaa 414  Q
    ||||| ||||||||| |||||||   |||||||||||||||| | || ||   ||||||  ||| |||||||| ||||  |||||||||||||||| |||    
T  3628889 ttcttcagtacacgtatgagttttt-tctagactctagttctacattctggtcataaatttgatgctatcaaaccaccattaatttgtataatcacataa 3628791  T
Q  415 tcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  3628790 tcagtcaatttgaaaagttatttcattgaaagaatcacaacaat 3628747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 337
Target Start/End: Complemental strand, 41666141 - 41666058
Alignment:
Q  254 aaaaattaaatctaatacccaccccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttt 337  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||||||||  |||| |||||||||  ||||||||||||||||    
T  41666141 aaaaattaagtctaataccaaccccacttaaataaaaaatatatatgttacttcatcttctttcttcggtacacgtttgagttt 41666058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 380 - 457
Target Start/End: Complemental strand, 23567352 - 23567274
Alignment:
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||| |||||||||||    
T  23567352 ctatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaatactatttcattgaaagtatcacaacaat 23567274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 12531561 - 12531624
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  12531561 aatttgtataatcacttaatcagtcaatttaaaaatctatttcattgaaagaatcacaacaatc 12531624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 457
Target Start/End: Complemental strand, 39698016 - 39697938
Alignment:
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||||| |||| | ||||||||| |||| ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  39698016 ctatcaaaccaccaccaatttgtatgatcatttaattagtcaatttgaaaagctatttcattgaaagaatcacaacaat 39697938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 392 - 458
Target Start/End: Original strand, 1004056 - 1004124
Alignment:
Q  392 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta--ttcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||||||||||||||||||||||||||  |   ||||||||||||||||||||||||    
T  1004056 ccctaatttgtataatcacttaatcagtcaatttgaaaaaattatttcattgaaagaatcacaacaatc 1004124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 457
Target Start/End: Original strand, 35874840 - 35874990
Alignment:
Q  309 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccct--aatttgtataa 406  Q
    ||||||||||| ||||||||| |||||||   |||||||||||||||| |||| || ||||||||  ||| |||||||| |||      |||||||||||    
T  35874840 ttttctttcttcagtacacgtatgagttttt-tctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataa 35874938  T
Q  407 tcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||||||| ||||||||||||| ||| ||| | ||||||| |||||||||    
T  35874939 tcacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaat 35874990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 458
Target Start/End: Complemental strand, 30915403 - 30915286
Alignment:
Q  343 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcatt- 440  Q
    ||||||||| |||| |||| || | ||| ||| ||| ||| |||| | || | ||| ||||||||||||||||||||||||||||||||||| ||||||     
T  30915403 tagactctaattctcctttctggacatagatctgatgctaccaaacctcctccaatatgtataatcacttaatcagtcaatttgaaaagctatttcatta 30915304  T
Q  441 gaaagaatcacaacaatc 458  Q
     |||||||||||||||||    
T  30915303 aaaagaatcacaacaatc 30915286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 29372359 - 29372422
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagctattc-attgaaagaatcacaacaatc 458  Q
    |||||||||||||| |||||||||||||||| |||| ||||| ||||||||||| |||||||||    
T  29372359 aatttgtataatcatttaatcagtcaatttggaaagttattcaattgaaagaatgacaacaatc 29372422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 396 - 450
Target Start/End: Original strand, 42076110 - 42076165
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagctat-tcattgaaagaatca 450  Q
    |||||||||||| ||||||||| |||||||||||||||||  ||||||||||||||    
T  42076110 aatttgtataataacttaatcaatcaatttgaaaagctataacattgaaagaatca 42076165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 303
Target Start/End: Original strand, 12531432 - 12531482
Alignment:
Q  253 gaaaaattaaatctaatacccaccccatttaaataaaaaatatatatgtta 303  Q
    ||||||| || |||||||||||||||| |||||||||||||| ||||||||    
T  12531432 gaaaaatcaactctaatacccaccccacttaaataaaaaatagatatgtta 12531482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 1003901 - 1003949
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctc 231  Q
    |||||||||||||||||||||||||| ||| ||||| |||||| |||||    
T  1003901 tcaggcccggccttgagggtgtgcaaagtgctcaaccaggccgcgcctc 1003949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 5971818 - 5971759
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagctattcattgaaagaatcacaacaatc 458  Q
    ||||| ||| |||||||||||||||||||| |||||||||   || |||||||||||||||||    
T  5971818 aatttctatcatcacttaatcagtcaatttaaaaagctat---tttaaagaatcacaacaatc 5971759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 39698130 - 39698079
Alignment:
Q  253 gaaaaattaaatctaatacccacc-ccatttaaataaaaaatatatatgtta 303  Q
    |||||||||| | ||||||||||| ||| |||||||||||||||||||||||    
T  39698130 gaaaaattaactttaatacccacctccacttaaataaaaaatatatatgtta 39698079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 23567464 - 23567418
Alignment:
Q  254 aaaaattaaatctaatacccaccccatttaaataaaaaatatatatg 300  Q
    ||||||||| ||| |||||||| ||| ||||||||||||||||||||    
T  23567464 aaaaattaactctgatacccactccacttaaataaaaaatatatatg 23567418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 2546037 - 2545957
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 422  Q
    |||||||||||||||| ||| ||  | |||| ||| || ||||||||||||||| || || |||||||||||||||| ||||    
T  2546037 tctagactctagttctccttatttgacataattcgcatgctatcaaatcacccc-aaattatataatcacttaatcaatcaa 2545957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 193 - 458
Target Start/End: Complemental strand, 46221969 - 46221702
Alignment:
Q  193 ccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaa 291  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||||||    
T  46221969 ccttgagggtgtgcaaggtgctcaactaggccgggcctccaaatgctacggacctctaacgaaaaattaaatctaatacccacccctacttaaataaaaa 46221870  T
Q  292 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 391  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||  |||||||| |||||||| |||||||||||  ||    
T  46221869 atatatatgttatatcattttctttctttagtatacgtttgagtttttttctagactctagttctcttttttgtacataaatcgaatcctatcaaactac 46221770  T
Q  392 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  46221769 ccctaatttgtagaatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatc 46221702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 189 - 458
Target Start/End: Complemental strand, 8358564 - 8358293
Alignment:
Q  189 ccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc-catttaaata 287  Q
    ||||| |||||||||||||||||| ||| | |||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||| || |||||||    
T  8358564 ccggctttgagggtgtgcaaggtgctcatccaggccgggcctccaaatgctacgggcctctaacaaaaaattaaatctaatatccaccctcacttaaata 8358465  T
Q  288 aaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaa 387  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  8358464 aaaaatatatatgttatatcattttctttctttagtatacgtttgagtttttctctagactttagttctcctttttgtacataaatcggatcctatcaaa 8358365  T
Q  388 tcacccctaatttgtataatcacttaatcagtcaatttgaaaagctat-tcattgaaagaatcacaacaatc 458  Q
     |||||||||||| |||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  8358364 ccacccctaatttatataatcacttaatcagtcaatttaaaaagttatctcattgaaagaatcacaacaatc 8358293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 201 - 457
Target Start/End: Complemental strand, 18015839 - 18015582
Alignment:
Q  201 gtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaatatatat 299  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  18015839 gtgtgcaagatgctcaaccaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccccacttaaataaaaaatatatat 18015740  T
Q  300 gttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatt 399  Q
    |||||||| |||||||||||||||||| ||||||||||   |||||||||||||| | ||||||||| |||||||||||||||||||| |||||||||||    
T  18015739 gttatatccttttctttctttagtacatgtttgagttttt-tctagactctagttttcctttttgtacataaatcggatcctatcaaaccacccctaatt 18015641  T
Q  400 tgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  18015640 tgtataatcacttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaat 18015582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 183 - 458
Target Start/End: Complemental strand, 33419393 - 33419116
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccattt 282  Q
    ||||||||||||| ||||||| ||| |||| ||||| |||||||| |||||||| |||||| |||||||||||||||||||||||||| |||||||| ||    
T  33419393 tcaggcccggcctcgagggtgagcatggtgctcaaccaggccgggtctccaaatattacggtcctctaacgaaaaattaaatctaataaccaccccactt 33419294  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||   ||||||||||||||||| |||||||| |||||||||||||||    
T  33419293 aaataaaaaatatatatgttatatccttttctttctttaatacacgtttgagtttttttctagactctagttcttgtttttgtacataaatcggatccta 33419194  T
Q  383 tcaaatcacccctaatttgtataatcacttaa-tcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||  ||||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||| ||||    
T  33419193 tcaaactacccctaatttgtataatcacttaattaagtcaatttgaaaagttatttcattgaaagaatcacaataatc 33419116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 184 - 458
Target Start/End: Original strand, 33909855 - 33910129
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 281  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||||  | |    
T  33909855 caggcctggccttgggggtgtgcaaggtgctcaaccaggccgggcctccaaatgctacgggcctcaaacaaaaaattaagtctaatacccacccctcact 33909954  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 381  Q
    ||||||||||| | ||||||||||||  ||||||||||  ||||||||||||||||   |||||||||||||||| ||||||||| ||||||| ||||||    
T  33909955 taaataaaaaaaa-atatgttatatc--tttctttcttcggtacacgtttgagtttttttctagactctagttctcctttttgtacataaatctgatcct 33910051  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33910052 atcaaatcacccctaatttgtataatcgcttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 33910129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 184 - 452
Target Start/End: Complemental strand, 42161398 - 42161125
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 281  Q
    |||||||| |||||||||||||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||| ||||| || ||||  | |    
T  42161398 caggcccgaccttgagggtgtgcaaggtgctcaaccaggccgagcctccaaatgctacgggcctctaacgaaaaattaaatttaatatcctccccccact 42161299  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc- 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||  |||||||| |||||| ||||||     
T  42161298 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctaattctcatttttgtacataaattggatcct 42161199  T
Q  381 -tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 452  Q
     ||||||| |||||||||||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||||    
T  42161198 atatcaaaccacccctaatttgtataatcacttgatcagttaatttggaaagctatttcattgaaagaatcaca 42161125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 36796645 - 36796371
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatt 281  Q
    |||||||| |||||||| ||||||||||| ||||| ||||||| |||||||||  ||||| ||||||||||||||| ||||||||||||||||  |||||    
T  36796645 caggcccgaccttgaggctgtgcaaggtgctcaaccaggccgg-cctccaaatactacggacctctaacgaaaaat-aaatctaatacccacctcccatt 36796548  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagact-ctagttcttctttttgtatataaatcggatcc 380  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||| |||||||| ||||||||| |||||||||||||    
T  36796547 taaataaaaaatatatatgttatatcattt-ctttctttagtacacgtttgagttttt-tctagacttctagttctcctttttgtacataaatcggatcc 36796450  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||  |||| ||||||||||||| |||||||||||||||||| |||  || ||||||||||||||||||||||||    
T  36796449 tatcaaactacccttaatttgtataataacttaatcagtcaatttggaaaattatttcattgaaagaatcacaacaatc 36796371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 222 - 458
Target Start/End: Original strand, 4099794 - 4100033
Alignment:
Q  222 gccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaataaaaaatatatatgttatatcattttctttctt 319  Q
    |||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||  ||| ||||||||||||||||||||||||||| |||||||||||    
T  4099794 gccgggtctccaaatgctacgggcttctaacgaaaaattaaatttaatacccacctcccacttaaataaaaaatatatatgttatatccttttctttctt 4099893  T
Q  320 tagtacacgtttgag-tttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcag 418  Q
    ||||||||||||||| |||   ||||||| ||| |||| ||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||     
T  4099894 tagtacacgtttgagttttttttctagacgctaattctcctttttgtacataaatcggat-ctatcaaaccacccctaatttgtataatcacttaatcaa 4099992  T
Q  419 tcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  4099993 tcaatttgaaaagctatttcattgaaagaattacaacaatc 4100033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 241 - 458
Target Start/End: Original strand, 11672429 - 11672651
Alignment:
Q  241 cgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttta 338  Q
    ||||||| |||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  11672429 cgggcctttaacgaaaaattaaatctaatatccaccccccacttaaataaaaaatatatatgttatatcattttctttctttagtacacatttgagtttt 11672528  T
Q  339 aatctagactctagttcttctttttgt--atataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-t 435  Q
      |||||||||||||||| ||||||||  |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| || |    
T  11672529 tttctagactctagttctcctttttgtacatataaatcggatcctatcaaaccactcctaatttgtataatcacttaatcagtcaatttggaaagttatt 11672628  T
Q  436 tcattgaaagaatcacaacaatc 458  Q
    ||| |||||||||||||||||||    
T  11672629 tcaatgaaagaatcacaacaatc 11672651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 186 - 458
Target Start/End: Complemental strand, 44894306 - 44894028
Alignment:
Q  186 ggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatac----ccacccc--a 279  Q
    |||||| |||||||| ||| |||| || ||||| ||| |||||||||||||| |||||  ||||||  ||||||||||||||||||    |||||||  |    
T  44894306 ggcccgaccttgaggatgtacaagatgctcaaccaggtcgggcctccaaatgctacggatctctaagaaaaaattaaatctaatacatacccacccctca 44894207  T
Q  280 tttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatc 379  Q
    |||||||||||||||||||||||||||| || | |  |||||||||||||||||||||   |||||||| ||||||||||||||||| ||||||||||||    
T  44894206 tttaaataaaaaatatatatgttatatctttatatc-ctttagtacacgtttgagtttttttctagactatagttcttctttttgtacataaatcggatc 44894108  T
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||| ||||||| || |||||||||||||||||||||    
T  44894107 ctattaaaccacccctaatttgtataatcacttaatcaatcaatttggaaagctattttattgaaagaatcacaacaatc 44894028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 185 - 458
Target Start/End: Complemental strand, 6380359 - 6380083
Alignment:
Q  185 aggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--tt 282  Q
    ||||||||| ||||||| | |||||||| | ||| |||||||||||||||||   || |||||| ||| ||||||||| ||||||| |||| || |  ||    
T  6380359 aggcccggctttgagggagcgcaaggtgcttaaccaggccgggcctccaaataccacaggcctcaaacaaaaaattaagtctaatatccactccctactt 6380260  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcct 381  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||   | ||||||||||||||||||||||||| || |||| ||||||    
T  6380259 aaataaaaaa-atatatgttatatcattttatttctttagtacacgtttgagttttttttctagactctagttcttctttttgtacatgaatctgatcct 6380161  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| ||  ||| ||||||||||||||||||||||||    
T  6380160 atcaaaccacccctaatttgtataatcacttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaatc 6380083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 182 - 363
Target Start/End: Original strand, 38524971 - 38525154
Alignment:
Q  182 ttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--cccca 279  Q
    ||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  | |||    
T  38524971 ttcagacccggctttgagggtgtgcaaggtgctcaaccaggccgggcctccaaatgctacggacctctaacgaaaaattaaatctaatacccactctcca 38525070  T
Q  280 tttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttcttttt 363  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||| || |||||    
T  38525071 cttaaataaaaaatatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagttttttttttt 38525154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 190 - 380
Target Start/End: Complemental strand, 12251657 - 12251466
Alignment:
Q  190 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc--catttaaata 287  Q
    ||||||||||||||||||||||  ||||  ||||||| |||||||||| |||| ||||||| | ||||||||||||||||||||||||  || |||||||    
T  12251657 cggccttgagggtgtgcaaggtactcaatcaggccggacctccaaatgctacgagcctctatcaaaaaattaaatctaatacccaccctccacttaaata 12251558  T
Q  288 aaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 380  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||    
T  12251557 aaaaatatatatgttatctcattttctttctttagtacacgtttgagttt-tttctagactctagttctcctttttgtacataaatcggatcc 12251466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 254 - 458
Target Start/End: Complemental strand, 7636536 - 7636325
Alignment:
Q  254 aaaaattaaatctaatacccacc--ccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-----ctaga 346  Q
    ||||||||| ||||| |||||||  ||| |||||||||||| |||| ||||||||| |||||||| ||  |||||||||| |||||   |     |||||    
T  7636536 aaaaattaagtctaacacccacctcccacttaaataaaaaa-atatgtgttatatctttttcttttttcggtacacgtttaagtttttttttcttctaga 7636438  T
Q  347 ctctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaag 445  Q
    ||||| |||| | ||||||| |||| || |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  7636437 ctctacttctcccttttgtacataactctgatcctatcaaaccacccctaatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaag 7636338  T
Q  446 aatcacaacaatc 458  Q
    |||| ||||||||    
T  7636337 aatcgcaacaatc 7636325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 183 - 458
Target Start/End: Complemental strand, 26282802 - 26282541
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-att 281  Q
    ||||||||||||||||||| |||||||||  ||||  | |||||||||||||| | ||  ||||||  |  ||||||||| ||||||||||||||| | |    
T  26282802 tcaggcccggccttgagggagtgcaaggtactcaatcaagccgggcctccaaaagctataggcctcaga--aaaaattaactctaatacccacccccact 26282705  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 381  Q
    ||||||||||||||||||||||           |||||||   |||||||||||||   |||||||| ||||||| || | || | ||||||| | | ||    
T  26282704 taaataaaaaatatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctcctatctgcacataaatctggtact 26282619  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26282618 atcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 26282541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 190 - 458
Target Start/End: Complemental strand, 40001948 - 40001695
Alignment:
Q  190 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataa 288  Q
    |||||||||| | |||||||||| |||| || |||||||||||||| | || ||||||  ||   |||||||| ||||||||||||||| | ||||||||    
T  40001948 cggccttgagagagtgcaaggtgctcaattaagccgggcctccaaaagctatgggcctaaaa---aaaattaactctaatacccacccctacttaaataa 40001852  T
Q  289 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaat 388  Q
    |||||||||||||||           |||||||   |||||||||| ||   |||||||| |||||||||| | || | ||||||| | | ||||||||     
T  40001851 aaaatatatatgttac----------ttcttta---cacgtttgaggtttt-tctagactttagttcttctatctgaacataaatctggtactatcaaac 40001766  T
Q  389 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40001765 cacctccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 40001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 289 - 457
Target Start/End: Original strand, 32956670 - 32956839
Alignment:
Q  289 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaat 388  Q
    |||| ||||||||||  || |||||||||||  ||||||||||||||||   | |||||||||||||| |||| || | ||||||| ||| ||||||||     
T  32956670 aaaaaatatatgttacttctttttctttcttcggtacacgtttgagtttttttttagactctagttctcctttctggacataaatctgatgctatcaaac 32956769  T
Q  389 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||| ||||| |||||||| |||||||||||||||  |||| || |||||||||||||||||||||||    
T  32956770 cacccccaatttttataatcatttaatcagtcaatttataaagttatttcattgaaagaatcacaacaat 32956839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 458
Target Start/End: Original strand, 26633227 - 26633428
Alignment:
Q  256 aaattaaatctaatacccaccccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttc 355  Q
    ||||||| | ||||||||||||||  | ||  |||||| || ||||||  || |||||||||||  |||||||| |||||||   |||||||||||||||    
T  26633227 aaattaagtataatacccaccccaacttaaagaaaaat-tacatgttacttctttttctttcttcggtacacgtatgagttttt-tctagactctagttc 26633324  T
Q  356 ttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaac 454  Q
    | |||| || | ||||||  ||| |||| ||| ||||   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26633325 tactttctggacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaac 26633424  T
Q  455 aatc 458  Q
    ||||    
T  26633425 aatc 26633428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 279
Target Start/End: Original strand, 27432380 - 27432476
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccca 279  Q
    ||||||||| ||||||||||||| |||||| ||||| ||||| ||||| |||||| |||||||||||||||||||||||||| ||||||||||||||    
T  27432380 tcaggcccgaccttgagggtgtgtaaggtgctcaaccaggcccggccttcaaatgctacgggcctctaacgaaaaattaaatttaatacccacccca 27432476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 368 - 458
Target Start/End: Complemental strand, 773974 - 773883
Alignment:
Q  368 ataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||| ||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||||    
T  773974 ataaatctgatgctatcaaatcacccctaatttgtataattactttatcagtcaatttgaaaagctattttattgaaagaatcacaacaatc 773883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 188 - 447
Target Start/End: Original strand, 25061697 - 25061957
Alignment:
Q  188 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaa 285  Q
    |||| ||||| ||| |||||||||| ||||| | ||||| ||||||||| ||| ||||||  ||  ||||||||| ||||||| ||||||| |  |||||    
T  25061697 cccgaccttgggggagtgcaaggtgctcaaccaagccggacctccaaatattatgggcctaaaaa-aaaaattaagtctaatatccaccccctacttaaa 25061795  T
Q  286 taaaaaatata-tatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatc 384  Q
    ||||||| | | |||||||  || |||||||||||  |||||||||| | |||   | |||||||||||||||||||||| | ||||||| ||| |||||    
T  25061796 taaaaaaaaaaatatgttacttctttttctttcttcggtacacgttttaatttt--tttagactctagttcttctttttggacataaatctgatgctatc 25061893  T
Q  385 aaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaa 447  Q
    |||  |  |  |||||||| |||||||| |||||| |||||||||||||| |||||||||||||    
T  25061894 aaactattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 25061957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 280 - 458
Target Start/End: Original strand, 41908064 - 41908243
Alignment:
Q  280 tttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttcttttt-gtatataaatcggat 378  Q
    ||||||||||||| | ||||||||  || |||||||||||  ||||| ||||||||||   ||| |||||| |||||  ||||| | | ||||||| |||    
T  41908064 tttaaataaaaaaaa-atatgttacttctttttctttcttcggtacatgtttgagtttttttcttgactctggttctcattttttggacataaatctgat 41908162  T
Q  379 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcacaacaatc 458  Q
     || ||||| |||| | |||||||| |||||||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  41908163 gctttcaaaccacctccaatttgtacaatcacttaatcagtcaattagaaaagctgtttcattgaaagaatcacaacaatc 41908243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 12251365 - 12251287
Alignment:
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  12251365 tatcaaaccacccctaatttctataatcatttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatc 12251287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 309 - 454
Target Start/End: Original strand, 30739038 - 30739184
Alignment:
Q  309 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 408  Q
    |||||||| ||  ||||||||||||||||   |||||| || | |||| |||| || | ||||||||||| |||||||| || |   ||||| |||||||    
T  30739038 ttttcttttttcggtacacgtttgagtttttttctagattccaattctcctttctggacataaatcggatgctatcaaaccatcttcaatttttataatc 30739137  T
Q  409 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaac 454  Q
    ||||||||||||||||||||||| || |||||| |||||||||||||    
T  30739138 acttaatcagtcaatttgaaaagttatttcattaaaagaatcacaac 30739184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 458
Target Start/End: Original strand, 1365821 - 1366074
Alignment:
Q  191 ggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaata-aa 289  Q
    ||||||||||| |||||||||| ||||  | ||||||||||||||   || |||||||  |  ||||||||| |||||||||||||||| ||||||| ||    
T  1365821 ggccttgagggagtgcaaggtgctcaatcaagccgggcctccaaaatctatgggcctccga--aaaaattaactctaatacccaccccacttaaatataa 1365918  T
Q  290 aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 389  Q
    ||||||||||||||       |||||       |||||||||||||||   |||||||| ||||||| || | || | ||||||  | | |||||||| |    
T  1365919 aaatatatatgtta------cttctt-------tacacgtttgagttt-cttctagactttagttctcctatctggacataaatttggtactatcaaacc 1366004  T
Q  390 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||  | |||| ||||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  1366005 actaccaattggtataatgacttaatcagtcaatttgaaaagttatttcatagaaagaatcacaacaatc 1366074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 457
Target Start/End: Complemental strand, 36438468 - 36438351
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 439  Q
    ||||| |||||||||| |||| || | ||||||  ||| |||||||| |||    ||||||||||||||||||||||||||||||||||| | | |||||    
T  36438468 tctaggctctagttctactttctggacataaatttgatgctatcaaaccactatcaatttgtataatcacttaatcagtcaatttgaaaaaccatttcat 36438369  T
Q  440 tgaaagaatcacaacaat 457  Q
    ||||||||||||||||||    
T  36438368 tgaaagaatcacaacaat 36438351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 44877070 - 44877006
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcct 247  Q
    ||||||||||||||||||| |||||||||| || |||||||||||||| ||||||||||||||||    
T  44877070 tcaggcccggccttgagggagtgcaaggtgctctactaggccgggccttcaaatgttacgggcct 44877006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 454
Target Start/End: Complemental strand, 40738108 - 40737994
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 439  Q
    |||| ||||||||||| ||||||  | ||||||  ||| |||||||| ||||   |||||||||||| ||||||||||||||||| |||||||| || ||    
T  40738108 tctaaactctagttctacttttttgacataaatttgatgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaagctattttat 40738009  T
Q  440 tgaaagaatcacaac 454  Q
    |||||||||||||||    
T  40738008 tgaaagaatcacaac 40737994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 457
Target Start/End: Original strand, 9479074 - 9479191
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 439  Q
    |||| ||||||||||| |||| || | ||||||  ||| |||||||| ||||   |||||||||||| ||||||||||||||||| |||| ||| ||| |    
T  9479074 tctaaactctagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaaactatttcgt 9479173  T
Q  440 tgaaagaatcacaacaat 457  Q
    ||||||||||||||||||    
T  9479174 tgaaagaatcacaacaat 9479191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 395 - 457
Target Start/End: Complemental strand, 18895460 - 18895397
Alignment:
Q  395 taatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||||||||||| ||||||||||||||| ||||| || |||||||||||||||||||||||    
T  18895460 taatttgtataatcaattaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaat 18895397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 455
Target Start/End: Original strand, 42312012 - 42312071
Alignment:
Q  397 atttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaaca 455  Q
    |||||||||||||||| || |||||||||||||||||| |||||| ||||||||||||||    
T  42312012 atttgtataatcacttgattagtcaatttgaaaagctatttcattaaaagaatcacaaca 42312071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 455
Target Start/End: Complemental strand, 40841491 - 40841247
Alignment:
Q  214 tcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccatttaaataaaa---aatatatatgttatatca 308  Q
    ||||||| |||||||||||||||  || ||||||  ||   |||||||| | ||||||||||  |||| | ||||||||   || |||||||||   ||     
T  40841491 tcaactaagccgggcctccaaatactatgggcctaaaa---aaaattaagtttaatacccacaccccactgaaataaaataaaaaatatatgtttcttct 40841395  T
Q  309 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc-cctaatttgtataat 407  Q
    ||||||||||| |||||| ||||||||||   ||||||||||| || ||||||||| | ||||||  |||  ||||||| |||| |||||||||||||||    
T  40841394 ttttctttcttcagtacatgtttgagttt-tttctagactctaattattctttttggacataaatatgatgttatcaaaccacctcctaatttgtataat 40841296  T
Q  408 cacttaatcagtcaatttgaaaagctattc-attgaaagaatcacaaca 455  Q
     ||||||  | |||||||  |||| ||||| ||| ||||||| ||||||    
T  40841295 tacttaactaatcaatttataaagttattctattaaaagaattacaaca 40841247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 25609964 - 25610014
Alignment:
Q  254 aaaaattaaatctaatacccacc-ccatttaaataaaaaatatatatgtta 303  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  25609964 aaaaattaactctaatacccacctccatttaaataaaaaatatgtatgtta 25610014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 11672387 - 11672423
Alignment:
Q  182 ttcaggcccggccttgagggtgtgcaaggtgatcaac 218  Q
    ||||||||||||||||||||||||||||||| |||||    
T  11672387 ttcaggcccggccttgagggtgtgcaaggtgctcaac 11672423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 4099740 - 4099775
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaac 218  Q
    |||||||||||||||||||||||||||||| |||||    
T  4099740 tcaggcccggccttgagggtgtgcaaggtgctcaac 4099775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 44876217 - 44876154
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||| || ||||| |||||||||||||||  ||||||| |||||| |||||||||||||||||    
T  44876217 aatttttaaaatcatttaatcagtcaatttagaaagctatttcattaaaagaatcacaacaatc 44876154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 457
Target Start/End: Original strand, 7366689 - 7366751
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||| ||||| |||||||  ||||||||||||| ||| || ||||||||||||||||||||    
T  7366689 aatttgaataattacttaatttgtcaatttgaaaaactattttattgaaagaatcacaacaat 7366751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 458
Target Start/End: Complemental strand, 3799819 - 3799759
Alignment:
Q  399 ttgtataatcacttaatcagtcaatttgaaaagctatt-cattgaaagaatcacaacaatc 458  Q
    ||||||||||| ||||| || ||||||   |||||||| ||||||||||||||||||||||    
T  3799819 ttgtataatcatttaataagccaattttggaagctatttcattgaaagaatcacaacaatc 3799759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 32131065 - 32130789
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 281  Q
    |||||||||||||||||||||| |||||| ||||| |||| ||||||||||||| |||| || ||| ||||||||||||||||||||||||||||  | |    
T  32131065 caggcccggccttgagggtgtgtaaggtgttcaaccaggctgggcctccaaatgctacgagcttctcacgaaaaattaaatctaatacccaccccccact 32130966  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 381  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||| |||||||||||||||||| ||||||||||||||    
T  32130965 taaataaaaaatatatatgttatatcattttctttctttagtacccgtttgagttttt-tctagacactagttcttctttttgtacataaatcggatcct 32130867  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  32130866 atcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaatc 32130789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 183 - 458
Target Start/End: Complemental strand, 28463865 - 28463587
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 280  Q
    ||||||||||| |||| ||||||||||||| ||||  ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  |     
T  28463865 tcaggcccggctttgaaggtgtgcaaggtgttcaatcaggccggacctccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccac 28463766  T
Q  281 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 380  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||   |||||||||||||||| ||||||||| ||||||||||||     
T  28463765 ttaaataaaaaatatatatgttatatccttttctttctttagtaaacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatct 28463666  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||||||    
T  28463665 tatcaaaccacccctaatttgtataatcacttaatcaatcaagttgaaaagctatttcattgaaaaaatcacaacaatc 28463587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 183 - 458
Target Start/End: Original strand, 53011503 - 53011777
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccat 280  Q
    |||||||| ||||||||||||||||||||| ||||| || |||| |||||||||| ||||||||||||||||||||||||||||||||||||  ||||||    
T  53011503 tcaggcccagccttgagggtgtgcaaggtgctcaaccagaccgg-cctccaaatgctacgggcctctaacgaaaaattaaatctaatacccatcccccat 53011601  T
Q  281 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 380  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||   |||| |||||| |||| ||||||||| ||||||| |||||    
T  53011602 ttaaataaaaaatatat--gttatatcattttctttctttagtacacgtttgagttttt-tctaaactctaattctcctttttgtacataaatcagatcc 53011698  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||    
T  53011699 tatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattaaaagaatcacaacaatc 53011777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 184 - 458
Target Start/End: Original strand, 19661169 - 19661444
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatt 281  Q
    ||||||| ||||||||||||||||||||| ||||| |||| |||||| |||||| || ||| ||||||||||||||||||| |||||||||  ||||| |    
T  19661169 caggccccgccttgagggtgtgcaaggtgctcaaccaggc-gggccttcaaatgctatgggtctctaacgaaaaattaaatttaatacccatcccccact 19661267  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 381  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||  |||||||| ||||||||||||||    
T  19661268 taaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttt-tctagactctagttctcatttttgtacataaatcggatcct 19661366  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  19661367 atcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaaacacaacaatc 19661444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 195 - 458
Target Start/End: Complemental strand, 11682008 - 11681741
Alignment:
Q  195 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaaa 292  Q
    |||||||||||||||||| ||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  11682008 ttgagggtgtgcaaggtgctcaaccaggccgggccttcaaatgctacgagcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaaa 11681909  T
Q  293 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttc-tttttgtatataaatcggatcctatcaaatcac 391  Q
    ||||||| ||||||  |||||||||||||||||||||||||||||   |||||||||||||||| | ||||| || |||||||||||||||||||| |||    
T  11681908 tatatatattatattcttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccac 11681809  T
Q  392 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  11681808 ccctaatttttataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatc 11681741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 195 - 458
Target Start/End: Complemental strand, 11690287 - 11690020
Alignment:
Q  195 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaaa 292  Q
    |||||||||||||||||| ||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  11690287 ttgagggtgtgcaaggtgctcaaccaggccgggccttcaaatgctacgagcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaaa 11690188  T
Q  293 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttc-tttttgtatataaatcggatcctatcaaatcac 391  Q
    ||||||| ||||||  |||||||||||||||||||||||||||||   |||||||||||||||| | ||||| || |||||||||||||||||||| |||    
T  11690187 tatatatattatattcttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccac 11690088  T
Q  392 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  11690087 ccctaatttttataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatc 11690020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 183 - 425
Target Start/End: Original strand, 21168844 - 21169088
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat-- 280  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||  ||||||||| ||||||||||||||||||||||||||||||| |||||||||       
T  21168844 tcaggcccggccttgagggtatgcaaggtgctcaaccaggccggatctccaaatgatacgggcctctaacgaaaaattaaatctaatgcccaccccacac 21168943  T
Q  281 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 380  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||    
T  21168944 ttaaataaaaaatatatatgttataaccttttctttcttttgtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcc 21169043  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaattt 425  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||    
T  21169044 tatcaaatcacccctaatttgtataatcaattaatgagtcaattt 21169088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 185 - 458
Target Start/End: Original strand, 41038038 - 41038315
Alignment:
Q  185 aggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--attt 282  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||||||||| ||||| | |||||||||||||||||||||||| |||||||  ||||    
T  41038038 aggcccggccttgagggtgtgcaagatgctcaaccaggccgggcctccaaatgatacggtc-tctaacgaaaaattaaatctaatatccaccccccattt 41038136  T
Q  283 aaataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttcttttt-gtatataaatcggatcc 380  Q
    |||||||||| ||||||| ||||||| ||||  |||||||||||||||||||||||   |||||||||||||| || ||||| ||| |||||||| ||||    
T  41038137 aaataaaaaaatatatatattatatcttttttattctttagtacacgtttgagtttttttctagactctagttttttttttttgtacataaatcgaatcc 41038236  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  41038237 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaatc 41038315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 184 - 458
Target Start/End: Original strand, 44477827 - 44478104
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 281  Q
    |||||||||||||||||||||| |||||| ||||| ||| ||||||||||||| |||||| ||||||||||||||| |||||||||| |||||||  |||    
T  44477827 caggcccggccttgagggtgtgtaaggtgttcaaccaggtcgggcctccaaatattacggacctctaacgaaaaat-aaatctaatatccacccctcatt 44477925  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagac-tctagttcttctttttgtatataaatcggatcc 380  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   |||| || ||||||| |  |||||||| ||||||| |||||    
T  44477926 taaataaaaaatatatatgttatatcattttatttctttagtacacgtttgagtttttttctaaacttctagttatcatttttgtacataaatcagatcc 44478025  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  44478026 tatcaaaccacccataatttgtataatcactaaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatc 44478104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 183 - 458
Target Start/End: Complemental strand, 23426436 - 23426165
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccattt 282  Q
    ||||||||| |||||||| ||  ||||||| |||||||||| || |||| ||||  |||||||||||||||||||||||||||||||||||||||| |      
T  23426436 tcaggcccgaccttgaggatg--caaggtgctcaactaggctggacctcgaaatactacgggcctctaacgaaaaattaaatctaatacccaccccct-- 23426341  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
     | | ||| |||||||||||||||  |||||||||||||||| ||||||||||||   |||||||||||||||| ||||||||| |||||||||||||||    
T  23426340 -acttaaatatatatatgttatatacttttctttctttagtatacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatccta 23426242  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  23426241 tcaaaccacctctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatc 23426165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 188 - 458
Target Start/End: Original strand, 27632194 - 27632463
Alignment:
Q  188 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaa 285  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||  ||  ||| |||||  ||||||||||  ||||  |||||    
T  27632194 cccgaccttgagggagtgcaaggtgctcaactaggccgggcctccaaatgctacgggcctaaaa--aaatattaagactaatacccatccccctgttaaa 27632291  T
Q  286 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatca 385  Q
    ||||||| ||||  ||||||| |||||||||||| |||||||||||||||||   |||||| ||||||||| ||||||||| ||||||  ||||||||||    
T  27632292 taaaaaaaatat--gttatataattttctttcttcagtacacgtttgagtttttttctagattctagttctcctttttgtacataaatttgatcctatca 27632389  T
Q  386 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    || ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||    
T  27632390 aaccacccctaatttgtataatcacttaattagtcaatttgaaaagctacttcattgaaagaatcacatcaatc 27632463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 195 - 458
Target Start/End: Original strand, 23256394 - 23256659
Alignment:
Q  195 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa- 292  Q
    |||||||||||||||||| ||||  ||||||  ||||||||||||| ||| || |||||||||||||||| ||||| ||||||| | ||||| ||||||     
T  23256394 ttgagggtgtgcaaggtgctcaatcaggccgaacctccaaatgttatgggtctttaacgaaaaattaaatataatatccacccccacttaaacaaaaaaa 23256493  T
Q  293 -tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 391  Q
     ||||||||||||||| ||||||||||| ||||||| |||||||||   | ||||||| |||||| ||||||||| |||||||||||||||||||| |||    
T  23256494 atatatatgttatatccttttctttctt-agtacacatttgagttttttt-tagactccagttctcctttttgtacataaatcggatcctatcaaaccac 23256591  T
Q  392 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||||||||| ||||||||||||||||||  ||||||| |||| |||||||||||||||||||    
T  23256592 ccctaatttgtataaccacttaatcagtcaatttagaaagctatttcaatgaaagaatcacaacaatc 23256659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 183 - 458
Target Start/End: Complemental strand, 29221900 - 29221620
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 280  Q
    ||||||||||||||| ||| |||||||||| |||||  | | |||||||||||||  | ||||||| ||| ||||||||| | |||||||||||||  |     
T  29221900 tcaggcccggccttgtgggagtgcaaggtgctcaaccggactgggcctccaaatgccatgggcctcaaacaaaaaattaagtttaatacccaccccccac 29221801  T
Q  281 ttaaataaaaaa--tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggat 378  Q
    ||||||||||||  ||||||||||||||| ||||||||||| | | |||||||||||||   ||||||||||| ||||  |||||||| ||||||| |||    
T  29221800 ttaaataaaaaaaatatatatgttatatccttttctttcttcatttcacgtttgagtttttttctagactctaattctcgtttttgtacataaatctgat 29221701  T
Q  379 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||| ||| | |||||||||||||||||||| | ||||||||| ||  ||| ||||||||| ||||||||||||||    
T  29221700 cctatcaaaccactcttaatttgtataatcacttaaacggtcaatttggaagtctatttcattgaaggaatcacaacaatc 29221620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 298 - 436
Target Start/End: Original strand, 16072498 - 16072636
Alignment:
Q  298 atgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaa 397  Q
    ||||||||||||||||||||||  ||||||||||||||||   ||||  |||||| ||| ||||||||| ||||||  |||||||||||| || ||||||    
T  16072498 atgttatatcattttctttcttcggtacacgtttgagtttttttctaagctctagatctcctttttgtacataaatttgatcctatcaaaccatccctaa 16072597  T
Q  398 tttgtataatcacttaatcagtcaatttgaaaagctatt 436  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  16072598 tttgtataatcatttaatcagtcaatttgaaaaactatt 16072636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 39372936 - 39372815
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatt 281  Q
    |||||||||| |||||||||||||||||| ||||| ||||||| |||||||||  ||||||||| |||||||||||||||||||||| |||||  ||| |    
T  39372936 caggcccggc-ttgagggtgtgcaaggtgctcaaccaggccggacctccaaattctacgggcctttaacgaaaaattaaatctaatatccacccgccact 39372838  T
Q  282 taaataaaaaatatatatgttat 304  Q
    |||||||||||||||||||||||    
T  39372837 taaataaaaaatatatatgttat 39372815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 341 - 458
Target Start/End: Original strand, 29579827 - 29579945
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 439  Q
    ||||||||||||||||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||| | |||||||||||| ||||||||||| ||||     
T  29579827 tctagactctagttctattttttgtacataaatctgatcctatcaaaccacccataatttgtataattaattaatcagtcaaattgaaaagctatttcaa 29579926  T
Q  440 tgaaagaatcacaacaatc 458  Q
    |||||||||||||||||||    
T  29579927 tgaaagaatcacaacaatc 29579945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 45172903 - 45172644
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 282  Q
    |||| ||||||||||||| |||||||||| ||||  | ||||| ||| |||| |||| | ||||| ||  ||||||||||||||||| ||||||| | ||    
T  45172903 caggtccggccttgagggagtgcaaggtgctcaatcaagccggacctacaaaagttatgtgcctcaaa--aaaaattaaatctaatatccacccccactt 45172806  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    |||||||||||||||||||||           |||||||   |||||||||||||   |||||||| ||||||| |  | || | ||||||| | | |||    
T  45172805 aaataaaaaatatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctccaatctggacataaatctggtacta 45172720  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  45172719 tcaaaccaccc-taatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaatcacaacaatc 45172644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 292 - 458
Target Start/End: Complemental strand, 21791712 - 21791546
Alignment:
Q  292 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 391  Q
    ||||||||||||  || ||||||||| | |||||| ||||||||||   |||||||||||||||| |||| || | ||||||  ||| | |||||| |||    
T  21791712 atatatatgttacttctttttctttcatcagtacatgtttgagttttt-tctagactctagttctcctttctgaacataaatttgatgccatcaaaccac 21791614  T
Q  392 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |   ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  21791613 cttcaatgtgtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatc 21791546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 184 - 457
Target Start/End: Original strand, 34982029 - 34982288
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 282  Q
    |||||||| ||||||||| |||||| ||| ||||  | |||||||||||||| | || |||||||  |  ||||||||||||||||||||||||| | ||    
T  34982029 caggcccgaccttgagggagtgcaatgtgctcaatcaagccgggcctccaaaagctatgggcctc--agaaaaaattaaatctaatacccacccctactt 34982126  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    |||||||||||||||||||||       |||||       |||||||||||||||   |||||||| ||||| |||| | || | ||||||| | | |||    
T  34982127 aaataaaaaatatatatgtta------cttctt-------tacacgtttgagttt-tttctagactttagtttttctatctggacataaatctggtacta 34982212  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
     |||| || ||| ||||||||||||||||||||||||||||| ||||| ||| ||| |||||||||||||||||||    
T  34982213 acaaaccatccccaatttgtataatcacttaatcagtcaattggaaaaactatttcgttgaaagaatcacaacaat 34982288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 341 - 457
Target Start/End: Complemental strand, 35654097 - 35653980
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 439  Q
    |||||||||||||||| |||| || | ||||||  ||| |||||||| ||||   |||||||||||||||||||||| |||||||||||||||| |||||    
T  35654097 tctagactctagttctactttctggacataaatatgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcat 35653998  T
Q  440 tgaaagaatcacaacaat 457  Q
    ||||||||||||||||||    
T  35653997 tgaaagaatcacaacaat 35653980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 457
Target Start/End: Complemental strand, 43154936 - 43154788
Alignment:
Q  309 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 408  Q
    |||||||||||||| |||||| |||||||   |||||| ||||||||| ||||||| | ||||||  ||| |||||||| ||||   |||||||||||||    
T  43154936 ttttctttctttaggacacgtatgagttttt-tctagattctagttctactttttggacataaatttgatgctatcaaaccaccatcaatttgtataatc 43154838  T
Q  409 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||||||||||||| ||||| || |||||| ||||||||||||||||    
T  43154837 acttaatcagtcaatttaaaaagttatttcattaaaagaatcacaacaat 43154788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 337
Target Start/End: Complemental strand, 51066862 - 51066707
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatt 281  Q
    |||| ||||| ||||||| |||||||||  || || ||||||| |||| |||||||||||||||| ||| ||||||||| ||||||| |||  |||||||    
T  51066862 caggtccggctttgagggagtgcaaggttctctaccaggccggacctctaaatgttacgggcctcaaacaaaaaattaagtctaatatccactccccatt 51066763  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttt 337  Q
    ||||||||| | ||||||||||  |  |||||| |||| || ||||||||||||||    
T  51066762 taaataaaagaaatatatgttacttttttttctctcttcagcacacgtttgagttt 51066707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 458
Target Start/End: Original strand, 5545276 - 5545394
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 439  Q
    ||||||||||| ||||||| | || | ||||||  ||| | |||||| |||| | ||||||||||||||||||||| ||||||||| ||||||| |||||    
T  5545276 tctagactctaattcttctgtctggacataaatttgatgccatcaaaccaccaccaatttgtataatcacttaatcggtcaatttggaaagctatttcat 5545375  T
Q  440 tgaaagaatcacaacaatc 458  Q
    | |||||||||||||||||    
T  5545376 taaaagaatcacaacaatc 5545394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 457
Target Start/End: Original strand, 22423600 - 22423748
Alignment:
Q  309 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 408  Q
    |||| ||||||| |||||||| |||||||   |||||||||||||||| |||| || | ||||||  ||| |||||||| ||||   ||||||||| |||    
T  22423600 ttttttttctttggtacacgtatgagttttt-tctagactctagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtatgatc 22423698  T
Q  409 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||||| |||||||||||| ||| || ||||||||||||| ||||||    
T  22423699 acttaatcaatcaatttgaaaaactattttattgaaagaatcaaaacaat 22423748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 457
Target Start/End: Original strand, 24449040 - 24449190
Alignment:
Q  309 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccct--aatttgtataa 406  Q
    ||||||||||| ||||||||| |||||||   |||||||||||||||| |||| || ||||||||  ||| |||||||| |||      |||||||||||    
T  24449040 ttttctttcttcagtacacgtatgagttttt-tctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataa 24449138  T
Q  407 tcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||||||| ||||||||||||| ||| ||| | ||||||| |||||||||    
T  24449139 tcacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaat 24449190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 55134210 - 55134273
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  55134210 aattggtataatgacttaatcagtcaatttgaaaagctatttcatagaaagaatcacaacaatc 55134273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 29579655 - 29579766
Alignment:
Q  203 gtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaatatatatg 300  Q
    |||||| ||| ||||  ||||||| |||||||||| |||||| ||| ||| ||||||||| |||||| | ||||||  | |||||||||||| |||||||    
T  29579655 gtgcaaagtgctcaatcaggccggacctccaaatgctacgggtctcaaacaaaaaattaagtctaatgctcaccccccacttaaataaaaaaaatatatg 29579754  T
Q  301 ttatatcatttt 312  Q
    ||||||| ||||    
T  29579755 ttatatcctttt 29579766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 10575601 - 10575522
Alignment:
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||| |||||  || |||||||||||||||||||||||||||  |||| || |||||||||| |||||||||||||    
T  10575601 ctatcaaaccaccctcaacttgtataatcacttaatcagtcaatttagaaagttatttcattgaaataatcacaacaatc 10575522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 337
Target Start/End: Complemental strand, 48512393 - 48512342
Alignment:
Q  286 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagttt 337  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  48512393 taaaaaaaatatatgttatttctttttctttctttagtacacgtttgagttt 48512342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 425
Target Start/End: Complemental strand, 26329233 - 26329065
Alignment:
Q  256 aaattaaatctaatacc-caccccatttaaataaa-aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagt 353  Q
    ||||||| |||||| || ||||||| ||||||||| ||| ||||||||||  || |||||||||||| |||||||||||| |||   |||||||| || |    
T  26329233 aaattaagtctaatgccacaccccacttaaataaataaaaatatatgttacttctttttctttctttggtacacgtttgaattt-tttctagactgtaat 26329135  T
Q  354 tcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaattt 425  Q
    ||| |  |||| | ||||||| ||| ||| |||| |||| | ||||| |||||||| | |||||||||||||    
T  26329134 tctcc--tttggacataaatctgatgctaccaaaccacctccaatttatataatcattcaatcagtcaattt 26329065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 188 - 458
Target Start/End: Complemental strand, 19367690 - 19367418
Alignment:
Q  188 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaa 285  Q
    |||||| |||||||||||||||||| ||||| ||| |||||||||||||| |||||| |||||||||||| |||||||||||||| |  |||||||||||    
T  19367690 cccggctttgagggtgtgcaaggtgctcaaccaggtcgggcctccaaatgctacgggtctctaacgaaaa-ttaaatctaatacctatcccccatttaaa 19367592  T
Q  286 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatca 385  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||| ||||||    
T  19367591 taaaaaatatatatgttatatccttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggattctatca 19367492  T
Q  386 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19367491 aaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 19367418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 26152022 - 26151746
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 282  Q
    |||||||||||||||||||||||||| || ||||| ||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||||| ||||    
T  26152022 caggcccggccttgagggtgtgcaagatgctcaaccaggtcgggcctccaaatgctacgggtctctaacgaaaaat-aaatctaatacccacccccattt 26151924  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagact-ctagttcttctttttgtatataaatcggatcct 381  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||   |||||||| |||||||| ||||||||| ||||||||||||||    
T  26151923 aaataaaaaatatatatgttatatccttttctttctttagtatacgtttgagtttttttctagacttctagttctcctttttgtacataaatcggatcct 26151824  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  26151823 atcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatc 26151746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 192 - 458
Target Start/End: Complemental strand, 18676579 - 18676310
Alignment:
Q  192 gccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaa 289  Q
    |||||||| |||||||||||| ||||| ||||||||| |||||||| ||||||  ||||||||||||||||||||||||||||||||  | |||||||||    
T  18676579 gccttgagagtgtgcaaggtgctcaaccaggccgggcatccaaatgctacgggtttctaacgaaaaattaaatctaatacccacccctcacttaaataaa 18676480  T
Q  290 aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||||||||      
T  18676479 aaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaact 18676380  T
Q  390 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  18676379 acccctaatttgtataataacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatc 18676310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 184 - 457
Target Start/End: Original strand, 13020210 - 13020487
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 282  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||||||||| || |||||||||||||||||||||||||| ||||||||||||| | ||    
T  13020210 caggcccggccttgagggtgtgcaaggtgctcaaccagggcgggcctccaattgctacgggcctctaacgaaaaattaaatttaatacccacccccactt 13020309  T
Q  283 aaataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcc 380  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||   | |||||||||||||||  |||||||| |||||||||||||    
T  13020310 aaataaaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactctagttctcttttttgtacataaatcggatcc 13020409  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  13020410 tatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcatttaaagaatcacaacaat 13020487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 182 - 458
Target Start/End: Complemental strand, 42411835 - 42411557
Alignment:
Q  182 ttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--cccca 279  Q
    |||||||||||| |||||||||||||||||| ||||  ||||||||||||||| || || | |||||||||||||||||||||||||||||||  |||||    
T  42411835 ttcaggcccggcattgagggtgtgcaaggtgctcaatcaggccgggcctccaattgctaagagcctctaacgaaaaattaaatctaatacccaaccccca 42411736  T
Q  280 tttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatc 379  Q
     ||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||    
T  42411735 cttaaaaaaaatatatatatgttatatccttttctttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatc 42411637  T
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||| ||||||| |||||| |||||||||||||||||    
T  42411636 ctatcaaaccacccctaatttgtataatcacttaattagtcaatttggaaagctatttcatttaaagaatcacaacaatc 42411557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 192 - 458
Target Start/End: Original strand, 25222119 - 25222388
Alignment:
Q  192 gccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaataaa 289  Q
    ||||||||||| || |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| | |  |||||||||    
T  25222119 gccttgagggtatgaaaggtgctcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatctaataccgaccgcctacttaaataaa 25222218  T
Q  290 aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||| ||||||||| ||||||||||||||||||||||    
T  25222219 aaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactttagttctcctttttgtacataaatcggatcctatcaaatc 25222318  T
Q  390 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |  ||||||||||||||||||||||| |||||||||  |||| || ||||||||||||||||||||||||    
T  25222319 attcctaatttgtataatcacttaattagtcaatttagaaagttatttcattgaaagaatcacaacaatc 25222388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 183 - 458
Target Start/End: Complemental strand, 41096816 - 41096537
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 280  Q
    ||||||||| |||||| ||||||||||||  ||||  ||||||| |||| ||||| |||||| ||||||||||||||||||| |||||||||||||  |     
T  41096816 tcaggcccgaccttgaaggtgtgcaaggtactcaatcaggccggacctctaaatgctacgggtctctaacgaaaaattaaatttaatacccaccccccac 41096717  T
Q  281 ttaaataaaaa-atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatc 379  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||   |||||||||||||||| ||||||||| ||||||| ||||    
T  41096716 ttaaataaaaatatatatatgttatatccttttctttctttagtacacatttgagtttttttctagactctagttctcctttttgtacataaatcagatc 41096617  T
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  41096616 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaatc 41096537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 184 - 458
Target Start/End: Original strand, 45618765 - 45619041
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 281  Q
    |||||||  |||||||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  |||    
T  45618765 caggcccaaccttgagggtgtgcaaggtgctcagccaggccgggcctccaaatgctacgggcctctaacgaaaaat-aaatctaatacccaccccccatt 45618863  T
Q  282 taaataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagact-ctagttcttctttttgtatataaatcggatc 379  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||   |||||||| |||||||| ||||||||| ||||||||||||    
T  45618864 taaataaaaaaatatatatgttatatccttttctttctttagtatacgtttgagttttt-tctagacttctagttctcctttttgtacataaatcggatc 45618962  T
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  45618963 ctatcaaaccacccctaatttgtataatcacttaatcagtcaatttg-gaagctatttcattgaaagaatcacaacaatc 45619041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 183 - 458
Target Start/End: Original strand, 7993421 - 7993697
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 280  Q
    ||||| ||||| |||||||||||||||||| ||||   | ||||||||||||||| ||| | |||||||||||||||||||| |||||||||||||  ||    
T  7993421 tcaggtccggctttgagggtgtgcaaggtgctcaatctgaccgggcctccaaatgctacag-cctctaacgaaaaattaaatttaatacccaccccctat 7993519  T
Q  281 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 380  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||   |||||||||||||||| ||||||||| ||||| |||||||    
T  7993520 ttaaataaaaaatatatatgttatatccttttctttctttagtacacatttgagttttt-tctagactctagttctcctttttgtacataaaccggatcc 7993618  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  7993619 tatcaaaccacccctaatttgtataatcacttaatcagccaatttggaaagctatttcattgaaagaatcacaacaatc 7993697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 191 - 458
Target Start/End: Original strand, 6530455 - 6530724
Alignment:
Q  191 ggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaa 289  Q
    ||||||||||||||| |||||| ||||| || |||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  6530455 ggccttgagggtgtgtaaggtgctcaacgagaccggacctctaaatgatacgggcctctaacgaaaaattaaatctaatatccacccccacttaaataaa 6530554  T
Q  290 aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 389  Q
    ||||||||| |||||||| |||||||||||||||| | |||| |||||   ||||||||||||||||  |||||||| ||||||||||| |||||||| |    
T  6530555 aaatatatacgttatatccttttctttctttagtagatgtttaagtttttttctagactctagttctcatttttgtacataaatcggatactatcaaacc 6530654  T
Q  390 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  6530655 acccctaatttgtataatcacttaatcagtcaatttgaaaaggtatttcattgaaagaatcacaacaatc 6530724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 42760023 - 42759755
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccattta 283  Q
    |||| |||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| |||    
T  42760023 caggtccggccttgagggtgtacaaggtgctcaactaggtcgggcctccaaatgctacaggcctctaacgaaaaattaaatctaatatccaccccactta 42759924  T
Q  284 aataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||| ||||||||| |||||||||||| ||    
T  42759923 aataaaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaatcggatcata 42759824  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||| ||||| |||||| ||        ||||||||||||||| |||| || ||||||||||||||||||||||||    
T  42759823 tcaaaccacccataattttta--------taatcagtcaatttggaaagttatttcattgaaagaatcacaacaatc 42759755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 181 - 415
Target Start/End: Original strand, 36481191 - 36481425
Alignment:
Q  181 cttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--cccc 278  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||  ||||    
T  36481191 cttcaggcccggtcttgagggtgtgcaaggtgctcaaccaggccggacctccaaatgctacgggcctctaacgaaaaattaaatctaatacccacccccc 36481290  T
Q  279 atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggat 378  Q
    | ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||   | ||||||||| |||| ||||||||| |||||| ||||    
T  36481291 acttaaataaaaaatatatatgttatatcattttctttc-ttagtacacatttgagttt-cttttagactctaattctcctttttgtacataaattggat 36481388  T
Q  379 cctatcaaatcacccctaatttgtataatcacttaat 415  Q
    ||| ||||| |||||||||||||||||||||||||||    
T  36481389 cctttcaaaccacccctaatttgtataatcacttaat 36481425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 183 - 458
Target Start/End: Original strand, 4855777 - 4856058
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccat 280  Q
    ||||||| |||||||||||||||||||||| ||||| ||||||| |||||||||  |||||||||||||||||||| |||||||||||||||||  ||||    
T  4855777 tcaggcctggccttgagggtgtgcaaggtgctcaaccaggccggacctccaaattctacgggcctctaacgaaaaa-taaatctaatacccaccctccat 4855875  T
Q  281 ttaaat-aaaaaatatatatgttatatcattttctttctttagtacacgtttgag-tttaaatctaga-ctctagttcttctttttgt-atataaatcgg 376  Q
    |||||| |||||||||||||||||||||  ||||||||||| ||||||||||||| |||   ||||||  | ||||||| |||||||| | ||||||| |    
T  4855876 ttaaataaaaaaatatatatgttatatccctttctttctttcgtacacgtttgagttttttttctagatttttagttctcctttttgtaacataaatcag 4855975  T
Q  377 atcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  4855976 atcctatcaaaccacccctaatttgtataatcacttaatcagtgaatttggaaagctatttcattgaaagaatcacaacaatc 4856058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 195 - 458
Target Start/End: Original strand, 45042187 - 45042457
Alignment:
Q  195 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa 292  Q
    ||||||| | |||||||| ||||  ||| ||||||||||||||||| ||||||| ||| ||||||||| |||||||||||| ||  ||||||||||||||    
T  45042187 ttgagggagcgcaaggtgctcaatcaggtcgggcctccaaatgttatgggcctcaaacaaaaaattaagtctaatacccactccttatttaaataaaaaa 45042286  T
Q  293 tatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 391  Q
     |||||||| ||||||||||||||||| |||| ||||||||||||   | ||||||||||||||||||||| ||| ||||||  |||||||||||| |||    
T  45042287 aatatatgtcatatcattttctttcttcagtatacgtttgagttttttttctagactctagttcttcttttcgtacataaatttgatcctatcaaaccac 45042386  T
Q  392 ccctaatttgtataatcacttaatcagtcaatt---tgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||||||||||||||||||||   |||||  ||| ||||||||||||||||||||||||    
T  45042387 ccctaatttgtataatcacttaatcagtcaatttggtgaaagtctatttcattgaaagaatcacaacaatc 45042457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 187 - 458
Target Start/End: Original strand, 2063600 - 2063870
Alignment:
Q  187 gcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaat 286  Q
    |||||||| || ||| |||||||||| ||||| || ||||||||||||||  |||||||||| ||| ||||||||| |||||||||||||||| ||||||    
T  2063600 gcccggccctgggggagtgcaaggtgttcaaccagaccgggcctccaaatactacgggcctcaaacaaaaaattaagtctaatacccaccccacttaaat 2063699  T
Q  287 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 386  Q
    ||| || | | || ||||||| |||||||||||  ||| ||||||||||||   | |||||||||||| | ||||||||| ||||||   ||||||||||    
T  2063700 aaataaaaaa-atattatatccttttctttcttcggtatacgtttgagttttttt-tagactctagttttcctttttgtacataaatataatcctatcaa 2063797  T
Q  387 atcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  2063798 accacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatc 2063870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 248 - 458
Target Start/End: Original strand, 12269279 - 12269489
Alignment:
Q  248 ctaacgaaaaattaaatctaatacccaccccat-ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctaga 346  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||   | ||||    
T  12269279 ctaacgaaaaattaaatctaatatccaccccagcttaaataaaaaatatatatgttatatcattttttttctttagtacacatttgaattttttt-taga 12269377  T
Q  347 ctctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaag 445  Q
    ||||||||||  |||||| | ||||||| |||||||||||| |||||||||||||||||||||||||||||||  ||||| ||||||| |||||| |||     
T  12269378 ctctagttctcttttttgcacataaatcagatcctatcaaaccacccctaatttgtataatcacttaatcagt-gatttggaaagctatttcattaaaaa 12269476  T
Q  446 aatcacaacaatc 458  Q
    |||||| ||||||    
T  12269477 aatcaccacaatc 12269489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 298 - 458
Target Start/End: Complemental strand, 34062015 - 34061855
Alignment:
Q  298 atgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaa 397  Q
    |||||||||| ||||||||||| ||||||||| |||||||   | |||||| ||||||||||||||||| ||||||| | |||||||||| ||||| |||    
T  34062015 atgttatatctttttctttcttcagtacacgtatgagttttttt-tagactatagttcttctttttgtacataaatctggtcctatcaaaccacccataa 34061917  T
Q  398 tttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||| || |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  34061916 tttgtatgattacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatc 34061855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 184 - 457
Target Start/End: Original strand, 15457306 - 15457564
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca-ccccattt 282  Q
    |||||||||||||||| | |||||||||| ||||  | |||||||||||||| |||| |||||||    |||||||||| ||||||||||| ||||| ||    
T  15457306 caggcccggccttgagagagtgcaaggtgctcaatcaagccgggcctccaaaagttatgggcctc---agaaaaattaactctaatacccacccccactt 15457402  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    |||||||||||||||||||||       |||||       |||||||||||||||   |||||||| ||||||   | |  | | ||||||| | | |||    
T  15457403 aaataaaaaatatatatgtta------cttctt-------tacacgtttgagttt-tttctagactttagttcacttatccggacataaatctggtacta 15457488  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||  ||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  15457489 tcaaactacccccaatttgtataatcacttaatcagtcaatttgaaaagctattttattgaaagaatcacaacaat 15457564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 185 - 458
Target Start/End: Complemental strand, 18173197 - 18172939
Alignment:
Q  185 aggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attta 283  Q
    ||||||||| ||||||| |||||||||| ||||  | |||||||||||||  | || || ||||  |  ||||||||| ||||||||||||||| | |||    
T  18173197 aggcccggctttgagggagtgcaaggtgctcaatcaagccgggcctccaagagctatggacctcaga--aaaaattaactctaatacccacccccactta 18173100  T
Q  284 aataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctat 383  Q
    ||||||||||||||||||||           |||||||   |||||||||||||   |||||||| || |||| || | || | ||||||| | | ||||    
T  18173099 aataaaaaatatatatgttac----------ttcttta---cacgtttgagttttt-tctagacttta-ttctcctatatggacataaatctggtactat 18173015  T
Q  384 caaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  18173014 caaaccacccctaatttgtataatcacttaatcactcaatttgaaaagctatttcatcgaaagaatcacaacaatc 18172939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 457
Target Start/End: Original strand, 39081314 - 39081462
Alignment:
Q  309 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 408  Q
    |||| |||||| ||||||||| |||||||   |||||||||||||| | |||| || | ||||||  ||| |||||||| ||||   |||||||||||||    
T  39081314 ttttttttcttcagtacacgtatgagttttt-tctagactctagttttactttctggacataaatttgatgctatcaaaccaccatcaatttgtataatc 39081412  T
Q  409 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  39081413 acttaatcagtcaatttgaaaagctatttcattgaaagaattacaacaat 39081462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 457
Target Start/End: Complemental strand, 21747347 - 21747230
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctat-tcat 439  Q
    |||||||| |||||||||| | || | ||||||| | | |||||||| |||||| |||||||||||||||||||||||||||||| |||  |||| ||||    
T  21747347 tctagactttagttcttctatctgaacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaatttaaaatactatgtcat 21747248  T
Q  440 tgaaagaatcacaacaat 457  Q
    ||||||||||||||||||    
T  21747247 tgaaagaatcacaacaat 21747230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 315 - 457
Target Start/End: Original strand, 1418832 - 1418973
Alignment:
Q  315 ttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaa 414  Q
    ||||| ||||||||| |||||||   |||||||||||||||| ||||||  | |||| | | || |||||||| ||||   |||||||||||||||||||    
T  1418832 ttcttcagtacacgtatgagttttt-tctagactctagttctactttttagacataatttg-atgctatcaaaccaccatcaatttgtataatcacttaa 1418929  T
Q  415 tcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||||||||| ||||||| |||||||||||||||||||||||    
T  1418930 tcagtcaatttgtaaagctatttcattgaaagaatcacaacaat 1418973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 341 - 458
Target Start/End: Complemental strand, 27302645 - 27302527
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctat-tcat 439  Q
    ||||||||||| ||||||| | || | | ||||  ||| ||| ||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||    
T  27302645 tctagactctaattcttctgtctggacaaaaattcgatgctaccaaatcaccctcaatttgtataatcacttaatcggtcaatttgaaaagctatatcat 27302546  T
Q  440 tgaaagaatcacaacaatc 458  Q
    | |||||||||||||||||    
T  27302545 taaaagaatcacaacaatc 27302527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 18916313 - 18916053
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 282  Q
    |||||||| ||||||||  |||||||||| ||||  | | |||||||||||  | || ||||||  ||  ||||||||| ||||||||||||||| | ||    
T  18916313 caggcccgtccttgaggaagtgcaaggtgctcaatcaagtcgggcctccaatagctatgggcctaaaa--aaaaattaactctaatacccacccccactt 18916216  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    |||||||||||||||||||||             ||||  |||||||||||| ||   |||||||| |||||||||  | || | ||||||| | | |||    
T  18916215 aaataaaaaatatatatgtta-------------cttttttacacgtttgaggtttt-tctagactttagttcttcaatctggacataaatctggtacta 18916130  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||| || ||| |||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||| |||||    
T  18916129 tcaaaccatccccaatttgtataatcacttaatcaatcaatttgaaaagctatttcactgaaagaatcacagcaatc 18916053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 458
Target Start/End: Complemental strand, 36060087 - 36059904
Alignment:
Q  275 ccccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatc 374  Q
    ||||| |||||| |||||  || ||||||  || |||||||||||| |||| ||| | |||||   |||||||||||||||| ||||||  | | ||||     
T  36060087 ccccacttaaattaaaaaattacatgttacttctttttctttctttggtacgcgtataagttttt-tctagactctagttctactttttagacaaaaatt 36059989  T
Q  375 ggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
     ||| |||||||| ||||   |||||||||||||||||||||||| ||||| |||||||| ||||||||||||| ||||||||||    
T  36059988 tgatgctatcaaaccaccatcaatttgtataatcacttaatcagttaatttaaaaagctatttcattgaaagaaccacaacaatc 36059904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 455
Target Start/End: Complemental strand, 31273357 - 31273168
Alignment:
Q  266 taatacccacccc-atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttg 364  Q
    ||||||||||||| | | ||||||||||||||||||||| |||||||||||||||||||| || |||||||||   | || |||| || ||| |||| ||    
T  31273357 taatacccacccccactcaaataaaaaatatatatgttacatcattttctttctttagtatacatttgagttt-tttgtatactccagctctcctttctg 31273259  T
Q  365 tatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaaca 455  Q
     |  |||||  |||  ||||||| |||||| |||||||||||||| |||||||||||||||| ||  ||| |||||| ||||||||| ||||    
T  31273258 gacttaaatttgatgttatcaaaccacccc-aatttgtataatcatttaatcagtcaatttggaatactatttcattaaaagaatcataaca 31273168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 38985787 - 38985708
Alignment:
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||| |||| | |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  38985787 ctatcaaaccacctccaatttgtataatcatttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaatc 38985708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 457
Target Start/End: Original strand, 13997316 - 13997378
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  13997316 aatttgaataatcacttaatgagtcaatttgaaaaactatttcattgaaagaatcacaacaat 13997378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 457
Target Start/End: Original strand, 38599404 - 38599466
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||    
T  38599404 aatttgtataatcacttaatcaatcaatttgaaaaactatttcattgaaagaatcaaaacaat 38599466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 458
Target Start/End: Complemental strand, 17117691 - 17117644
Alignment:
Q  412 taatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17117691 taatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 17117644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 458
Target Start/End: Complemental strand, 1226465 - 1226265
Alignment:
Q  256 aaattaaatctaatacc-caccccatttaaataaaaaa--tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctag 352  Q
    ||||||| ||||||||| ||||||| ||||||||||||  |||||||||||  || |||||||      ||||||||||||||||   |||||||||||     
T  1226465 aaattaagtctaataccacaccccacttaaataaaaaaaatatatatgttacttctttttcttcg----gtacacgtttgagttttt-tctagactctaa 1226371  T
Q  353 ttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt--cattgaaagaatca 450  Q
    |||| ||||  | | ||||||| ||| ||| |||| |||||  ||||| |||||||||| |||||| |||||||||||| ||||   ||  |||||||||    
T  1226370 ttctccttt--ggacataaatctgatgctaccaaaccaccctcaatttatataatcactcaatcagacaatttgaaaagttatttcaataaaaagaatca 1226273  T
Q  451 caacaatc 458  Q
    ||||||||    
T  1226272 caacaatc 1226265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 17117896 - 17117778
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 282  Q
    |||||||||||||||||  ||| |||||| ||||  | ||||| ||||||||   || ||||| |  || |||||||||||||||||| |||||| | ||    
T  17117896 caggcccggccttgaggaagtgtaaggtgctcaatcaagccggacctccaaaaactatgggcccc--acaaaaaattaaatctaatactcacccccactt 17117799  T
Q  283 aaataaaaaatatatatgtta 303  Q
    |||||||||||||||||||||    
T  17117798 aaataaaaaatatatatgtta 17117778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 457
Target Start/End: Complemental strand, 29480699 - 29480637
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagctatt-cattgaaagaatcacaacaat 457  Q
    |||||| |||| |||||| ||||||||||||||||  |||| |||||||||||||||||||||    
T  29480699 aatttgaataaacacttattcagtcaatttgaaaaattatttcattgaaagaatcacaacaat 29480637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 38985899 - 38985849
Alignment:
Q  254 aaaaattaaatctaataccc-accccatttaaataaaaaatatatatgtta 303  Q
    ||||||||| |||||||||| |||||| |||||||||||||||||||||||    
T  38985899 aaaaattaactctaataccccaccccacttaaataaaaaatatatatgtta 38985849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 457
Target Start/End: Complemental strand, 18482575 - 18482506
Alignment:
Q  390 acccctaatttgtataatcacttaatcagtcaatttga-aaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||| ||||||||||||| |||||||||||||||| | | || || |||||||||||||| ||||||||    
T  18482575 acccccaatttgtataatcgcttaatcagtcaatttaacacagttatttcattgaaagaataacaacaat 18482506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 182; Significance: 3e-98; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 188 - 458
Target Start/End: Original strand, 6360554 - 6360824
Alignment:
Q  188 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaa 285  Q
    ||||||||||||||||||||||||| ||||  ||||| |||||||||||| ||||||||||||||||||| |||||||||||| |||||||  | |||||    
T  6360554 cccggccttgagggtgtgcaaggtgctcaatcaggccaggcctccaaatgctacgggcctctaacgaaaa-ttaaatctaatatccaccccccacttaaa 6360652  T
Q  286 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatca 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||  |||||| | ||||||||||||||||||    
T  6360653 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagttttt-tctagactctagttctcttttttgcacataaatcggatcctatca 6360751  T
Q  386 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctattcattgaaagaatcacaacaatc 458  Q
    || ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6360752 aaccacccttaatttgtataatcacttaatcagtcaatttgaaaagttattcattgaaagaatcacaacaatc 6360824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 195 - 457
Target Start/End: Original strand, 2618155 - 2618419
Alignment:
Q  195 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa 292  Q
    ||||| |||||||||||| ||||| ||| |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||  | ||||||||||||    
T  2618155 ttgagagtgtgcaaggtgctcaaccaggtcgggtctccaaatgttacgggcctctattgaaaaattaaatctaatacccaccccccacttaaataaaaaa 2618254  T
Q  293 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 392  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||  |||||||| |||||||||||||||||||| ||||    
T  2618255 tatatatgttatatcattttctttctttagtacacgtttgagttttt-tctagactttagttctcttttttgtacataaatcggatcctatcaaaccacc 2618353  T
Q  393 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2618354 cctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaat 2618419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 3515127 - 3514849
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 281  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||||| |||||| |||||||||||||||||||||||||| |||||| ||||||  | |    
T  3515127 caggcccggccttgagggtgtgcaaggtgctcaaccaagccgggcctacaaatgctacgggcctctaacgaaaaattaaatttaatactcaccccccact 3515028  T
Q  282 taaataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 380  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||||| ||||||||| ||||||| |||||    
T  3515027 taaataaaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctaaactctagttctcctttttgtacataaatcagatcc 3514928  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctat-tcattgaaagaatcacaacaatc 458  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| |||||||||||||||||||||||    
T  3514927 tatcaaaccacccctaatttgtataatcacgtaatcattcaatttggaaagctatatcattgaaagaatcacaacaatc 3514849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 190 - 458
Target Start/End: Original strand, 6754001 - 6754271
Alignment:
Q  190 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccatttaaata 287  Q
    ||||||||||| ||||||||||| ||||  ||| ||| |||||||||| |||||||||||| ||||||||||| |||||||| |||  |||| |||||||    
T  6754001 cggccttgaggatgtgcaaggtgttcaatcaggtcggacctccaaatgctacgggcctctatcgaaaaattaattctaatactcactccccacttaaata 6754100  T
Q  288 aaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaa 387  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||   |||||| |||||||||  |||||||| ||||||||||||||||||||    
T  6754101 aaaaatatatatgttatatcattttctttctttagtacgcgtttgagttttt-tctagattctagttctcttttttgtacataaatcggatcctatcaaa 6754199  T
Q  388 tcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
     || |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  6754200 ccatccctaatttgtatagtcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatc 6754271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 184 - 458
Target Start/End: Original strand, 29400929 - 29401205
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccattt 282  Q
    ||||||||| ||||||||||||||||||| ||||  ||  ||||  |||||||| |||||||||||||| ||||||||||| ||||||||||| ||| ||    
T  29400929 caggcccgggcttgagggtgtgcaaggtgctcaatcagatcgggtttccaaatgctacgggcctctaacaaaaaattaaatataatacccacctccactt 29401028  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||   ||| |||||||||| |  |||||||| |||||||| ||||||    
T  29401029 aaataaaaaatatatatgtcatatcattttctttctttagtacacgtttgagtttttttcttgactctagttttcatttttgtacataaatcgaatccta 29401128  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||  |||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  29401129 tcaaactacccctaattagtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatc 29401205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 193 - 458
Target Start/End: Complemental strand, 7525434 - 7525165
Alignment:
Q  193 ccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaa 290  Q
    ||||||||||||  ||| || ||||| || | ||||||||||||| |||||| |||||||||||||||||||||||||| ||||||  | ||||||||||    
T  7525434 ccttgagggtgtataagatgctcaaccagacggggcctccaaatgctacgggtctctaacgaaaaattaaatctaatactcaccccccacttaaataaaa 7525335  T
Q  291 aatatatatgttatatcattttcttt-ctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 389  Q
    ||| ||||| ||||||| |||| ||| |||||||||||||||||||||   |||||||||||||||| | ||||||| |||||||||||||||||||| |    
T  7525334 aatttatatattatatcctttttttttctttagtacacgtttgagtttttttctagactctagttctccattttgtacataaatcggatcctatcaaacc 7525235  T
Q  390 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||| |||||||||||||||||||||||||||||||| |||| || || |||||||||||||||||||||    
T  7525234 acccataatttgtataatcacttaatcagtcaatttggaaagttattttattgaaagaatcacaacaatc 7525165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 206 - 458
Target Start/End: Original strand, 57498 - 57753
Alignment:
Q  206 caaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccatttaaataaaaaatatatatgtta 303  Q
    ||||||| ||||| ||| ||| |||||||||| |||||||||| ||| ||||||||| ||||||||||||  |||| |||||||||| ||||||||||||    
T  57498 caaggtgctcaaccaggtcggacctccaaatgctacgggcctcaaacaaaaaattaagtctaatacccactccccacttaaataaaagatatatatgtta 57597  T
Q  304 tatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgta 403  Q
    ||||||||||||||||  ||||||||||||||||   | || ||||||||||| ||||||||| ||||||| |||||||||||| ||||| |||||||||    
T  57598 tatcattttctttcttcggtacacgtttgagtttttttttaaactctagttctcctttttgtacataaatctgatcctatcaaaccacccataatttgta 57697  T
Q  404 taatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||||||||||||||||  ||||||| |||||| |||||||||||||||||    
T  57698 taatcacttaatcagtcaatttagaaagctatttcattcaaagaatcacaacaatc 57753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 287 - 458
Target Start/End: Complemental strand, 12614885 - 12614715
Alignment:
Q  287 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 386  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||   | |||||||||||||| ||||||||| |||||||||||||||||||    
T  12614885 aaaaaatatatatgttatatccttttcttt-tttagtacacgtttgagttttttt-tagactctagttctcctttttgtacataaatcggatcctatcaa 12614788  T
Q  387 atcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12614787 accacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 12614715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 190 - 395
Target Start/End: Original strand, 24455014 - 24455220
Alignment:
Q  190 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaata 287  Q
    ||||||||||||||||||||||| ||||| ||| |||||||||||||| ||||| ||||||| ||||||||||||||||||||||  ||||| |||||||    
T  24455014 cggccttgagggtgtgcaaggtgctcaaccaggtcgggcctccaaatgctacggacctctaatgaaaaattaaatctaatacccaccccccacttaaata 24455113  T
Q  288 aaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaa 387  Q
    |||||||||||||||||||| |||   | ||||||||||||||||| |||   |||||||||||||||| |||||| |||||||||||||||||||||||    
T  24455114 aaaaatatatatgttatatc-tttatatcctttagtacacgtttgaatttttttctagactctagttctcctttttatatataaatcggatcctatcaaa 24455212  T
Q  388 tcacccct 395  Q
     |||||||    
T  24455213 ccacccct 24455220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 184 - 373
Target Start/End: Complemental strand, 31258734 - 31258543
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc---at 280  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||   |     
T  31258734 caggccccgccttgagggtgtgcaaggtgctcaaccaggccggacctacaaatgctacgggcctctaacgaaaaattaaatctaatacccacccccccac 31258635  T
Q  281 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaat 373  Q
     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||| || | ||||||||| ||||||    
T  31258634 ataaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttt-tttctagactctaattatcctttttgtacataaat 31258543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 310 - 458
Target Start/End: Original strand, 29149316 - 29149468
Alignment:
Q  310 tttctttctttagtacacgtttgagtt---taaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataa 406  Q
    |||||||||||||||||||||||||||   |   |||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  29149316 tttctttctttagtacacgtttgagttgtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacacctaatttgtataa 29149415  T
Q  407 tcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  29149416 tcacttaatcagtcaatttggaaagttagttcattgaaagaatcacaacaatc 29149468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 300 - 458
Target Start/End: Complemental strand, 628254 - 628094
Alignment:
Q  300 gttatatcattttctttctttagtacacgtttgagttt-aaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaat 398  Q
    |||||||| | |||||||||||||||| |||||| |||    |||||||||||||||  ||||||||| | ||||| |||| ||||||| ||||||||||    
T  628254 gttatatcctcttctttctttagtacatgtttgattttcttttctagactctagttcacctttttgtacacaaatcagatcttatcaaaccacccctaat 628155  T
Q  399 ttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  628154 ttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 628094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 12622236 - 12622144
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc 276  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||    
T  12622236 caggcccagccttgagggtgtgcaaggtgctcaaccaggccgggcctccaaatgctacggacctctaacaaaaaattaaatctaatatccacc 12622144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 343 - 457
Target Start/End: Complemental strand, 3748683 - 3748568
Alignment:
Q  343 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattg 441  Q
    |||| ||||||||| ||||||| | ||||||  ||| |||||||| | ||   |||||||||||||||||||||| |||||||||||||||| |||||||    
T  3748683 tagattctagttctactttttggacataaatttgatgctatcaaaccgccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcattg 3748584  T
Q  442 aaagaatcacaacaat 457  Q
    ||||||||||||||||    
T  3748583 aaagaatcacaacaat 3748568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 287 - 458
Target Start/End: Complemental strand, 30915539 - 30915365
Alignment:
Q  287 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat--ctagactctagttcttctttttgtatataaatcggatcctatc 384  Q
    |||||| ||| |||||| ||  |||||||||||| |||| ||| |||||||   |  ||||||||||||||| |||| || | ||||||  ||| |||||    
T  30915539 aaaaaaaatacatgttacatatttttctttctttggtactcgtatgagtttttttttctagactctagttctactttctggacataaatttgatgctatc 30915440  T
Q  385 aaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||| | ||   |||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||    
T  30915439 aaacccccatcaatttgtataattacttaatcagtcaatttgaaaagctatttaattgaaagaatcacaacaatc 30915365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 458
Target Start/End: Original strand, 31860806 - 31861066
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 282  Q
    |||||||| |||||||||  ||||||||| ||||  | ||||| |||| ||| | || ||||||  ||  ||||||||| ||||||||||||||| |  |    
T  31860806 caggcccgaccttgagggaatgcaaggtgctcaatcaagccggacctcgaaaagctatgggcctaaaaaaaaaaattaactctaatacccacccccacct 31860905  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    |||||||||||||||||||||           |||||||   |||||||||| ||   |||||||| |||||||||| | || | ||||||| | |  ||    
T  31860906 aaataaaaaatatatatgttac----------ttcttta---cacgtttgaggtttt-tctagactttagttcttctatctggacataaatctggta-ta 31860990  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31860991 tcaaaccacccc-aatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 31861066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 458
Target Start/End: Complemental strand, 1690741 - 1690632
Alignment:
Q  350 tagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaat 448  Q
    ||||||| || |||| | ||||||| | | |||||||| |||| | ||||||||||||||||| |||| ||||||||||||  || ||||||||||||||    
T  1690741 tagttctcctatttggacataaatctggtactatcaaaccaccaccaatttgtataatcacttgatcaatcaatttgaaaatttatttcattgaaagaat 1690642  T
Q  449 cacaacaatc 458  Q
    ||||||||||    
T  1690641 cacaacaatc 1690632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 457
Target Start/End: Original strand, 21946109 - 21946171
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||    
T  21946109 aatttgtataatcacttaatcagtctatttgaaaagctatttcattgaaagaaccataacaat 21946171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 458
Target Start/End: Complemental strand, 14893509 - 14893416
Alignment:
Q  366 atataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||| ||| ||||||||  || |  |||||||||||| |||||||||||||||||||||| ||| ||| || |||||||||||||||||    
T  14893509 atataaatctgatgctatcaaacaactctgaatttgtataattacttaatcagtcaatttgaaaaactatttcgttaaaagaatcacaacaatc 14893416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 309 - 458
Target Start/End: Original strand, 19231529 - 19231677
Alignment:
Q  309 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 408  Q
    |||| |||||| || ||||||||||||||   |||||| | ||||||| |||| || | ||||||| | | ||||||||  |||   |||||||||| ||    
T  19231529 ttttttttcttcaggacacgtttgagttttt-tctagagtttagttctactttctggacataaatctggtgctatcaaactaccttcaatttgtata-tc 19231626  T
Q  409 acttaatcagtcaatttgaaaagctat-tcattgaaagaatcacaacaatc 458  Q
    ||||||||| |||||||||||||||||  |||||||| |||||||||||||    
T  19231627 acttaatcaatcaatttgaaaagctatgacattgaaaaaatcacaacaatc 19231677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 458
Target Start/End: Complemental strand, 29308727 - 29308466
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-att 281  Q
    ||||||||||||||||||| |||||||||| ||||  | | |||||||||| | ||||  ||| ||  |  ||||||||| ||||||||||||||| | |    
T  29308727 tcaggcccggccttgagggagtgcaaggtgctcaatcaagtcgggcctccagaagttataggcttccga--aaaaattaactctaatacccacccccact 29308630  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 381  Q
    ||||||||||||||||||| ||           |||||||   |||||||||||||   |||| ||| ||||| |||| | || | ||||||  | | ||    
T  29308629 taaataaaaaatatatatggtac----------ttcttta---cacgtttgagttttt-tctaaactttagtttttctatctggacataaatttggtact 29308544  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||| |||  | |||| ||||||| |||||||||||||||||||||| ||| |||||||||  |||||||||||||    
T  29308543 atcaaaccactaccaattggtataatgacttaatcagtcaatttgaaaaactatttcattgaagtaatcacaacaatc 29308466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 1093290 - 1093181
Alignment:
Q  193 ccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaa 291  Q
    ||||||||| |||||||||| |||| || | ||||||| ||||  ||| |||||||  |  ||||||||| ||||||||||||||| | |||||||||||    
T  1093290 ccttgagggagtgcaaggtgctcaattaagtcgggccttcaaaatttatgggcctccga--aaaaattaactctaatacccacccccacttaaataaaaa 1093193  T
Q  292 atatatatgtta 303  Q
     |||||||||||    
T  1093192 ctatatatgtta 1093181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 458
Target Start/End: Original strand, 22503725 - 22503808
Alignment:
Q  373 tcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||||||||| ||| | |||||   |||||||||||||||||||||||||||| ||| ||| |||||||||| | |||||||    
T  22503725 tcggatcctatcaaaccactcataatt---ataatcacttaatcagtcaatttgaaaaactatttcgttgaaagaattaaaacaatc 22503808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 31234913 - 31234953
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagctatt 436  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  31234913 aatttgtataatcacttaatcaatcaatttgaaaagctatt 31234953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 1093102 - 1093040
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagctattcattgaaagaatcacaacaatc 458  Q
    |||| ||||||| ||| ||||||||||||| ||||||||||   |||||||||||||||||||    
T  1093102 aattggtataatgactaaatcagtcaatttaaaaagctatttcatgaaagaatcacaacaatc 1093040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 303
Target Start/End: Complemental strand, 1690894 - 1690774
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccatt 281  Q
    ||||||||| |||| |||| ||||||| || ||||  | |||| ||||||||| | || |||||||  |  ||||||||| ||||||||||||| ||| |    
T  1690894 tcaggcccgaccttaagggagtgcaagatgctcaatcaagccgagcctccaaaagctatgggcctcagaa-aaaaattaactctaatacccacctccact 1690796  T
Q  282 taaataaaaaatatatatgtta 303  Q
    ||||||||| ||||||||||||    
T  1690795 taaataaaatatatatatgtta 1690774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 457
Target Start/End: Complemental strand, 15035840 - 15035784
Alignment:
Q  398 tttgtataatcacttaatcagtcaatttgaaaagctattcattgaaagaatcacaacaat 457  Q
    |||||||||||| |||| |||||||||||||||||   | ||| ||||||||||||||||    
T  15035840 tttgtataatcatttaaccagtcaatttgaaaagc---tgattcaaagaatcacaacaat 15035784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 32056065 - 32056102
Alignment:
Q  399 ttgtataatcacttaatcagtcaatttgaaaagctatt 436  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  32056065 ttgtataatcacttaatcactcaatttaaaaagctatt 32056102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 458
Target Start/End: Original strand, 6294279 - 6294319
Alignment:
Q  419 tcaatttgaaaagctatt-cattgaaagaatcacaacaatc 458  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  6294279 tcaatttgaaaagcaatttcattgaaagaatcacaacaatc 6294319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 31244050 - 31244089
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagctatt 436  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  31244050 aatttgtataatcacttaatcaatcaa-ttgaaaagctatt 31244089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 179; Significance: 2e-96; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 188 - 458
Target Start/End: Complemental strand, 12884409 - 12884136
Alignment:
Q  188 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaa 285  Q
    |||| ||||||||||||| |||||  ||||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||| ||| ||| |  |||||    
T  12884409 cccgaccttgagggtgtgtaaggtactcaactaggtcgggcctccacatgctacggacctctaacgaaaaattaaatctaatatccaacccctacttaaa 12884310  T
Q  286 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatca 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| | ||||||||| ||||||||||||||||||    
T  12884309 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttttcctttttgtacataaatcggatcctatca 12884210  T
Q  386 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    || ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  12884209 aaccacccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattgaaagaatcacaacaatc 12884136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 184 - 457
Target Start/End: Complemental strand, 51110378 - 51110101
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatt 281  Q
    |||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||  ||| |    
T  51110378 caggcccgaccttgagggtgtgtaaggtgctcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatctaatacctaccacccact 51110279  T
Q  282 taaataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 380  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||| | ||||||||| |||||||||||||    
T  51110278 taaataaaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactatagttatcctttttgtacataaatcggatcc 51110179  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  51110178 tatcaaaccacccctaatttctataatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaacaat 51110101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 185 - 458
Target Start/End: Complemental strand, 14084975 - 14084700
Alignment:
Q  185 aggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccattt 282  Q
    |||||| ||||||||||||||||||||| ||||| || |||| |||||||||||||||||||| ||||||||||||||||||||||||||||  ||| ||    
T  14084975 aggccctgccttgagggtgtgcaaggtgctcaaccagaccggacctccaaatgttacgggcctttaacgaaaaattaaatctaatacccaccctccactt 14084876  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |||   |||||||||||||||| ||||||||| ||||||| |||||||    
T  14084875 aaataaaaaatatatatgttatatcattttctttcttcagtacaggtttgaattt-tttctagactctagttctcctttttgtacataaatctgatccta 14084777  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||  ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||    
T  14084776 tcaaatcacccctaaaatgtataatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaataatc 14084700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 189 - 458
Target Start/End: Complemental strand, 48722643 - 48722369
Alignment:
Q  189 ccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaat 286  Q
    ||||| |||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||  | ||||||    
T  48722643 ccggctttgagggtgtgcaaagtgctcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatttaatatccaccccccacttaaat 48722544  T
Q  287 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat--ctagactctagttcttctttttgtatataaatcggatcctatc 384  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||   |  |||||||||| ||||  |||||||| |||||||||||||||||    
T  48722543 aaaaaatatatatgttatatccttttctttctttagtacacgtttgagtttttttttctagactctatttctcatttttgtacataaatcggatcctatc 48722444  T
Q  385 aaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  48722443 aaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaataatcacaacaatc 48722369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 187 - 458
Target Start/End: Original strand, 50552285 - 50552560
Alignment:
Q  187 gcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaa 284  Q
    |||||| ||| || |||||||||||| ||||| || || || ||||||||| || || ||||||||||||||||||||||||||||||||||  | ||||    
T  50552285 gcccggtcttaagagtgtgcaaggtgctcaaccagaccaggtctccaaatgctatggacctctaacgaaaaattaaatctaatacccaccccccacttaa 50552384  T
Q  285 ataaaa-aatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctat 383  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||| ||||||||| ||||||||||||||||    
T  50552385 ataaaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcctat 50552484  T
Q  384 caaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  50552485 caaaccacccctaatttgtataatcacttaatcggtcaatttgaaaagttatttcattgaaagaatcacaacaatc 50552560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 182 - 458
Target Start/End: Complemental strand, 17487563 - 17487282
Alignment:
Q  182 ttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--cccca 279  Q
    ||||||||||| ||||||||||||||||||  ||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||    
T  17487563 ttcaggcccggtcttgagggtgtgcaaggtcctcaaccaagccgggcctccaaatgatacgggcctctaacgaaaaattaaatctaatacccacccccca 17487464  T
Q  280 tttaaataaaaaatatatatgttatatcattttctttcttta--gtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcgga 377  Q
     ||||||||||||||||||||||||||  |||||||||||||  |||||| |||||||||   |||||||||||||||| |||||| || ||||||||||    
T  17487463 cttaaataaaaaatatatatgttatattcttttctttctttagtgtacacatttgagtttttttctagactctagttctcctttttttacataaatcgga 17487364  T
Q  378 tcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||| |||||||||||| |||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||    
T  17487363 tcctatcaaaccacccctaatttatataatcacttaataaatcaatttggaaagttatttcattgaaagaatcacaacaatc 17487282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 183 - 458
Target Start/End: Complemental strand, 33124909 - 33124629
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccat 280  Q
    |||||||| ||||||||||||||||||||| ||||  |||| ||||||||||| | |||||||||||||||||||||||||| |||||||||  ||| |     
T  33124909 tcaggccctgccttgagggtgtgcaaggtgctcaatcaggctgggcctccaaacgctacgggcctctaacgaaaaattaaatttaatacccatccccaac 33124810  T
Q  281 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactc--tagttcttctttttgtatataaatcggat 378  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   | |||||||  ||||||| |||||| || |||||||||||    
T  33124809 ttaaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagtttttttttagactctatagttctcctttttctacataaatcggat 33124710  T
Q  379 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||| ||| |||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  33124709 cctattaaaccacctctaatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 33124629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 184 - 457
Target Start/End: Complemental strand, 18128215 - 18127937
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatt 281  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||  ||||| |    
T  18128215 caggcccggccttgagggtgtgcaaggtgctcaaccaggccgggcctctaaatgctacggacctctaacgaaaaattaaatttaatacccagcccccact 18128116  T
Q  282 taaataa--aaaatatatatgttatatcattttctttctttagtacacgtttgag-tttaaatctagactctagttcttctttttgtatataaatcggat 378  Q
    |||||||  |||| ||||||||||||||||||||||||||||||||||||||||| |||   |||||| |||||||| || |||||||  ||||||||||    
T  18128115 taaataaataaaaaatatatgttatatcattttctttctttagtacacgtttgagttttttttctagattctagttc-tccttttgtacgtaaatcggat 18128017  T
Q  379 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  18128016 cctatcaaaccacccataatttgtataatcacttaatcagtcaatttgaaaagctatttcattgcaagaatcacaacaat 18127937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 189 - 458
Target Start/End: Original strand, 10109511 - 10109785
Alignment:
Q  189 ccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaat 286  Q
    |||||||||||||||||||||||| ||||||| |||| ||||  ||||  |||||| ||| ||||||||||||||||||||| |||||||  | ||||||    
T  10109511 ccggccttgagggtgtgcaaggtgctcaactaagccgagcctttaaatactacgggtctcaaacgaaaaattaaatctaatatccaccccccacttaaat 10109610  T
Q  287 aaaaaatata-tatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatc 384  Q
    |||||| | | |||||||||||||||||||| |||| |||||||||||||||   | ||||||||||||||| ||||||||| |||||| ||||||||||    
T  10109611 aaaaaaaaaaatatgttatatcattttctttttttattacacgtttgagttttttttctagactctagttctcctttttgtacataaattggatcctatc 10109710  T
Q  385 aaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||| |||| ||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  10109711 aaaccaccactaatttgtataatcacttaatcagtcaatttggaaagcaatttcattgaaagaatcacaacaatc 10109785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 266 - 458
Target Start/End: Original strand, 30899526 - 30899721
Alignment:
Q  266 taatacccacccc-atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttcttttt 363  Q
    ||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   | ||||||||||||||| ||||||    
T  30899526 taatacccacccccacttaaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactctagttctccttttt 30899625  T
Q  364 gtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  30899626 gtacataaatcggatcctatcaaatcacccctaatttgtataatcacttaattagtcaatttggaaagctatttcattgaaagaatcacaacaatc 30899721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 184 - 458
Target Start/End: Original strand, 6150494 - 6150786
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--t 281  Q
    |||||||| |||||||||||||||||||| ||||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |  |    
T  6150494 caggcccgaccttgagggtgtgcaaggtgctcaatcaggccgggcttccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccctact 6150593  T
Q  282 taaataaaaa---------------atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgta 366  Q
    |||||| | |               |||||||||||||||  |||||||||||   || ||||||||||||   |||||||||||||||| |||||||||    
T  6150594 taaatatatatatatatatatatatatatatatgttatattcttttctttcttcgctatacgtttgagtttttttctagactctagttctcctttttgta 6150693  T
Q  367 tataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
     ||||||| |||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6150694 cataaatcagatcctatcaaaccacccctaatttatataatcatttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 6150786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 185 - 457
Target Start/End: Complemental strand, 20905564 - 20905287
Alignment:
Q  185 aggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--attt 282  Q
    ||||||| ||||| |||  ||||||||||||||  ||||||||||||||||||| | ||| ||| ||| ||||||||| |||||||| ||||||  | ||    
T  20905564 aggcccgaccttgggggaatgcaaggtgatcaatcaggccgggcctccaaatgtcatgggtctcaaacaaaaaattaagtctaatactcacccccgactt 20905465  T
Q  283 aaataaaaaata-tatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcc 380  Q
    |||||||||| | ||||||||||||  ||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||||| |||||||  ||||    
T  20905464 aaataaaaaaaaatatatgttatattcttttctttctttagtacacgtttgagttttatttctagactctagttctcctttttgtacataaatctaatcc 20905365  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||| || |||||||||||||||||||||| |||||||||||| ||  ||| |||||||||||||||||||||||    
T  20905364 tatcaaaccagccctaatttgtataatcacttattcagtcaatttggaagtctatttcattgaaagaatcacaacaat 20905287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 184 - 373
Target Start/End: Original strand, 20470516 - 20470706
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatt 281  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||  |||||      
T  20470516 caggccccgccttgagggtgtgcaaggtgctcaaccaggccggacctacaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccaca 20470615  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaat 373  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||| || | ||||||||| ||||||    
T  20470616 taaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttt-tttctagactctaattatcctttttgtacataaat 20470706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 184 - 458
Target Start/End: Original strand, 52055338 - 52055617
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccatt 281  Q
    |||||||| ||||| ||| |||||||||| ||||| |||||| ||||||||||| || ||| ||| ||  ||||||||| ||||||||||||  |||| |    
T  52055338 caggcccgaccttgggggagtgcaaggtgctcaaccaggccgagcctccaaatgctatgggtctcaaataaaaaattaagtctaatacccactccccact 52055437  T
Q  282 taaataaa-aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatct-agactctagttcttctttttgtatataaatcggatc 379  Q
    ||||| || ||| |||||||||||||||||||||||||| |||| ||||||||||||   | | ||||||||||||| ||||||||| |||||||  |||    
T  52055438 taaatgaataaaaatatatgttatatcattttctttcttcagtatacgtttgagttttttttttagactctagttctcctttttgtacataaatctaatc 52055537  T
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
     |||||||  | || |||||| |||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  52055538 atatcaaactatccataatttatataatcacttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaatc 52055617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 215 - 458
Target Start/End: Complemental strand, 29208341 - 29208097
Alignment:
Q  215 caactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaatatatatgttatatcattttc 313  Q
    |||| ||||||| |||||||||  || | ||||| ||| ||||||||| |||||||| |||||| | |||||||||||| |||||||||||||| |||||    
T  29208341 caaccaggccggacctccaaattatatgagcctcaaacaaaaaattaagtctaatactcacccccacttaaataaaaaa-atatatgttatatccttttc 29208243  T
Q  314 tttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcactta 413  Q
    ||||||  |||||||||||| |||   ||||||||||||||||  |||||||| |||||||  ||| ||||||| ||||||||||||||||||||| |||    
T  29208242 tttcttcggtacacgtttgaatttttttctagactctagttctcttttttgtacataaatctaatcatatcaaaccacccctaatttgtataatcattta 29208143  T
Q  414 atcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||| || ||  ||| ||||||||||||||||||||||||    
T  29208142 atcagtcaatctggaagtctatttcattgaaagaatcacaacaatc 29208097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 254 - 458
Target Start/End: Complemental strand, 27703737 - 27703528
Alignment:
Q  254 aaaaattaaatctaatacccacccc--atttaaat---aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagact 348  Q
    ||||||||| |||||||||||||||  | ||||||   |||||||||||||||||  || |||||||||||||||||||||||||||||   ||||||||    
T  27703737 aaaaattaagtctaatacccaccccccacttaaattaaaaaaaatatatatgttacttctttttctttctttagtacacgtttgagttttt-tctagact 27703639  T
Q  349 ctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaa 447  Q
    ||||||||  |||||| | ||||||  ||| |||||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||    
T  27703638 ctagttctcttttttgaacataaatttgatgctatcaaaccacccccaatttgtataatcacttaatcagtcaatttggaaagctatttcatcgaaagaa 27703539  T
Q  448 tcacaacaatc 458  Q
    |||||||||||    
T  27703538 tcacaacaatc 27703528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 241 - 458
Target Start/End: Original strand, 25930448 - 25930669
Alignment:
Q  241 cgggcctctaacgaaaaattaaatctaatacccaccc--catttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttta 338  Q
    |||||||| ||| |||| |||| | ||||||||||||  || |||||||||||| | || ||| ||||| |||||||| ||  ||||||||||||||||     
T  25930448 cgggcctcaaacaaaaatttaagtttaatacccaccctccacttaaataaaaaaaaaatgtgtgatatccttttcttttttcggtacacgtttgagtttt 25930547  T
Q  339 aa-tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-tt 436  Q
       ||||||||||||||||  |||||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  25930548 ttgtctagactctagttctcatttttgtacataaatctgatcctatcaaactacccctaatttgtataatcacttaatcagtcaacttgaaaagctattt 25930647  T
Q  437 cattgaaagaatcacaacaatc 458  Q
    ||||||||| ||||||||||||    
T  25930648 cattgaaaggatcacaacaatc 25930669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 254 - 458
Target Start/End: Complemental strand, 30005108 - 30004906
Alignment:
Q  254 aaaaattaaatctaatacccacc--ccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat--ctagactc 349  Q
    ||||||||| |||||||||||||  |||||||||||||||| |||| ||||||||| |||||||| ||  ||||||||||||||||   |  ||||||||    
T  30005108 aaaaattaagtctaatacccacctcccatttaaataaaaaa-atatgtgttatatccttttcttttttcggtacacgtttgagtttttttttctagactc 30005010  T
Q  350 tagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaat 448  Q
    || |||| ||||||||| ||||||| ||||||||||||      | |||||||||||||||||||||| | |||||||||||||| ||||||||||||||    
T  30005009 tacttctcctttttgtacataaatccgatcctatcaaa------ccaatttgtataatcacttaatcaattaatttgaaaagctatttcattgaaagaat 30004916  T
Q  449 cacaacaatc 458  Q
    | ||||||||    
T  30004915 cgcaacaatc 30004906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 458
Target Start/End: Complemental strand, 6333787 - 6333515
Alignment:
Q  188 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaa 285  Q
    |||| ||||||||| |||||||||| || |  ||| ||| ||||||||||||||  ||||| ||| ||||||||  |||||||  ||  |||||||||||    
T  6333787 cccgaccttgagggagtgcaaggtgctctaacagggcggacctccaaatgttacaagcctcaaacaaaaaattatgtctaatattcatcccccatttaaa 6333688  T
Q  286 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatca 385  Q
    ||||||| ||||||||||  |  |||||||||||  ||||||||||||||||   | ||||||||||||||  ||  |||| ||||||| ||| ||||||    
T  6333687 taaaaaaaatatatgttacttatttttctttcttcggtacacgtttgagtttttctttagactctagttctcattcctgtacataaatctgatactatca 6333588  T
Q  386 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    || ||  |||||| |||| |||||||||||||||||| ||| |||| || || ||| |||||||||||||||||    
T  6333587 aacca-tcctaatctgtaaaatcacttaatcagtcaaattggaaagttattttattaaaagaatcacaacaatc 6333515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 458
Target Start/End: Original strand, 12971214 - 12971471
Alignment:
Q  188 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaa 285  Q
    |||| ||||||||| |||||||||| ||||  | |||||||||||||  |  | |||||||  |  ||||||||| |||||||||||||||  | |||||    
T  12971214 cccgaccttgagggagtgcaaggtgctcaatcaagccgggcctccaagagcaatgggcctcaga--aaaaattaactctaatacccaccccccacttaaa 12971311  T
Q  286 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatca 385  Q
    ||||||||||||||||||           |||||||   |||||||||||||   |||||||| ||||||| || | || | ||||||| |||  |||||    
T  12971312 taaaaaatatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctcctatctggacataaatctgatattatca 12971397  T
Q  386 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    || |||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  12971398 aaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatcgaaagaatcacaacaatc 12971471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 341 - 458
Target Start/End: Original strand, 50371081 - 50371199
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcat 439  Q
    |||||||||||||||| |||| || |||||||   ||| ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||  |||||    
T  50371081 tctagactctagttctcctttctggatataaagttgatgctatcaaatcaccctcaatttgtataatcacttaatcagtcaatttgaaaaactgtttcat 50371180  T
Q  440 tgaaagaatcacaacaatc 458  Q
    |||||||||||||||||||    
T  50371181 tgaaagaatcacaacaatc 50371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 214 - 400
Target Start/End: Original strand, 28189211 - 28189403
Alignment:
Q  214 tcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa-----tatatatgttatat 306  Q
    ||||| |||||  |||| |||||| |||||| ||| ||| |||||| || |||||||||||||||  | ||||||||||||     ||||||||||||||    
T  28189211 tcaaccaggccaagccttcaaatgctacgggtctcaaacaaaaaatcaagtctaatacccaccccccacttaaataaaaaagaatatatatatgttatat 28189310  T
Q  307 cattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaattt 400  Q
    ||||||||||||| | |||||||||||||||   | |||||| ||||||| ||||||||| ||||||| ||||||||||||  ||| |||||||    
T  28189311 cattttctttcttcaatacacgtttgagttt-tttttagactttagttctcctttttgtacataaatctgatcctatcaaactacctctaattt 28189403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 354 - 458
Target Start/End: Complemental strand, 28885775 - 28885670
Alignment:
Q  354 tcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 452  Q
    |||| |||||||  |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||  ||||||| ||||||| ||||||||||    
T  28885775 tcttttttttgtgcataaatcggatcctatcaaaccacccataatttgtataatcacttaatcaatcaattttgaaagctatttcattgtaagaatcaca 28885676  T
Q  453 acaatc 458  Q
    ||||||    
T  28885675 acaatc 28885670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 309 - 458
Target Start/End: Original strand, 5560399 - 5560548
Alignment:
Q  309 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 408  Q
    ||||||||||| |||||||||||||| ||   | |||||| |||||||  ||| || | ||||||| | | ||| |||| |||||| |||||||||||||    
T  5560399 ttttctttcttcagtacacgtttgagatttttt-tagactatagttctcatttctggacataaatctggtgctaccaaaccacccccaatttgtataatc 5560497  T
Q  409 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  5560498 acttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaatc 5560548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 182 - 316
Target Start/End: Complemental strand, 2022076 - 2021942
Alignment:
Q  182 ttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatt 281  Q
    ||||||||||  |||| ||| |||||||||  ||||| ||||||||| |||||||  ||| | |||| ||| ||||||||| ||||||||| ||||||||    
T  2022076 ttcaggcccgaacttgggggagtgcaaggtactcaaccaggccgggcttccaaatactacagacctcaaacaaaaaattaagtctaatacctaccccatt 2021977  T
Q  282 taaataaaaaatatatatgttatatcattttcttt 316  Q
    ||||| ||||| ||||  |||||||| ||||||||    
T  2021976 taaattaaaaaaatatgagttatatccttttcttt 2021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 322 - 457
Target Start/End: Complemental strand, 37873898 - 37873762
Alignment:
Q  322 gtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtca 421  Q
    |||||||| |||||||   |||||||||||||||| |||| |  | ||||||  ||| |||||||| ||||   |||||||||| ||||||||||||| |    
T  37873898 gtacacgtatgagtttttttctagactctagttctactttctagacataaatttgatgctatcaaaccaccatcaatttgtatagtcacttaatcagtta 37873799  T
Q  422 atttgaaaagct-attcattgaaagaatcacaacaat 457  Q
    ||||||||| ||  |||||||||||||||||||||||    
T  37873798 atttgaaaaactgtttcattgaaagaatcacaacaat 37873762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 341 - 452
Target Start/End: Complemental strand, 44836838 - 44836726
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 439  Q
    |||||| ||||||||| |||| || | ||||||  ||| |||||||| ||||   ||||||||||||||||||||||||||||||||||| ||| ||||     
T  44836838 tctagattctagttctactttctgaacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcac 44836739  T
Q  440 tgaaagaatcaca 452  Q
    |||||||||||||    
T  44836738 tgaaagaatcaca 44836726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 458
Target Start/End: Original strand, 2 - 72
Alignment:
Q  389 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||    
T  2 cacccttaatttgtataatcacttaatcagtcaatttggaaagtgatttcattgaaagaatcacaacaatc 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 457
Target Start/End: Complemental strand, 17674416 - 17674354
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  17674416 aatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaat 17674354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 458
Target Start/End: Original strand, 1269347 - 1269616
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 280  Q
    ||||||||||||||| ||||| |||||  |  |||| | ||||||| || ||| |||| ||||||| ||  || |||||| ||||||| |||| ||  |     
T  1269347 tcaggcccggccttg-gggtgcgcaagcagcacaaccaagccgggcttctaaaagttatgggcctcaaaaaaacaattaagtctaatatccacacctcac 1269445  T
Q  281 ttaaataaaaa-atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatc 379  Q
    ||||||||||| ||||||||||| | || |||||||| ||  ||||||||||||||||   ||||||||||| |||| |||| |  | ||||||| |||     
T  1269446 ttaaataaaaatatatatatgttttttctttttcttttttctgtacacgtttgagttt-tttctagactctaattctcctttctagacataaatctgatg 1269544  T
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||| ||| |||||| ||||||||         ||| |||||||||||||||||| |||||| |||||||||||||||||    
T  1269545 ctatgaaaccacccccaatttgta--------aaattagtcaatttgaaaagctatttcattaaaagaatcacaacaatc 1269616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 395 - 457
Target Start/End: Complemental strand, 13120929 - 13120866
Alignment:
Q  395 taatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  13120929 taatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcaccacaat 13120866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 457
Target Start/End: Complemental strand, 22386899 - 22386837
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||| | |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  22386899 aatttgaacaatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaat 22386837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 457
Target Start/End: Original strand, 42740057 - 42740174
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 439  Q
    |||||||||||||||| |||| || | |||| |  ||| ||||||||  |||   |||||||||||| ||||||| |||||||||||||| ||| |||||    
T  42740057 tctagactctagttctactttctggacataagtttgatgctatcaaacaaccatcaatttgtataataacttaattagtcaatttgaaaaactatttcat 42740156  T
Q  440 tgaaagaatcacaacaat 457  Q
    |||||||||| |||||||    
T  42740157 tgaaagaatcgcaacaat 42740174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 457
Target Start/End: Original strand, 15441193 - 15441355
Alignment:
Q  296 atatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccct 395  Q
    ||||||||  || |||||||||||   |||||||||||||||   |||||||||||||||| |||| |  | ||||||   || |||||||| ||||       
T  15441193 atatgttacttctttttctttcttcgatacacgtttgagttttt-tctagactctagttctcctttctagacataaatataatgctatcaaaccacctac 15441291  T
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcatt-gaaagaatcacaacaat 457  Q
    |||||||||||||||||||||| |||||||  ||||||| ||||||  ||||||||||||||||    
T  15441292 aatttgtataatcacttaatcactcaatttataaagctatttcattaaaaagaatcacaacaat 15441355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 396 - 457
Target Start/End: Original strand, 24556808 - 24556870
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||| ||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||||    
T  24556808 aatttgaataatcacttaataagtcaatttgaaaaactatttcatttaaagaatcacaacaat 24556870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 450
Target Start/End: Original strand, 3907366 - 3907528
Alignment:
Q  287 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 386  Q
    |||||| | ||||||||  || |||||||| |||||||||||||| |||||   | |||||| || || |||||| || | ||||||  |||  ||||||    
T  3907366 aaaaaaaaaatatgttacttctttttctttttttagtacacgtttaagttttttt-tagactttattttttctttatgaacataaatacgatggtatcaa 3907464  T
Q  387 atcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatca 450  Q
    | ||| || |||||||||||||| ||||||| ||||||||||||  || ||||||||||||||||    
T  3907465 accactcc-aatttgtataatcatttaatcaatcaatttgaaaaattatttcattgaaagaatca 3907528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 458
Target Start/End: Original strand, 9777380 - 9777479
Alignment:
Q  361 tttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt--cattgaaagaatcacaacaatc 458  Q
    |||| ||||||||| ||| ||| |||| |||||| ||||| |||||||||| |||||||||||||||| | |||||   ||  |||||||||||||||||    
T  9777380 tttggatataaatctgatgctaccaaaccacccccaatttatataatcactcaatcagtcaatttgaataactatttcaataaaaagaatcacaacaatc 9777479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 436
Target Start/End: Complemental strand, 32810415 - 32810373
Alignment:
Q  394 ctaatttgtataatcacttaatcagtcaatttgaaaagctatt 436  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  32810415 ctaatttgaataatcacttaatcaatcaatttgaaaagctatt 32810373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 28886253 - 28886140
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccattt 282  Q
    ||||||||||||| ||||  |||||||||  |||| |   ||| ||| ||||||||||| |||| ||||||| |||||||||||||| |||||  || |     
T  28886253 caggcccggccttaaggggttgcaaggtgtccaaccaaatcggaccttcaaatgttacgtgcctttaacgaagaattaaatctaatatccaccttcactc 28886154  T
Q  283 aaataaaaaatata 296  Q
    ||||||||||||||    
T  28886153 aaataaaaaatata 28886140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 416
Target Start/End: Complemental strand, 26486513 - 26486407
Alignment:
Q  309 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 408  Q
    |||| |||||||||||||||| |||||||   |||| ||||||||||| |||| || | ||||||  ||| |||||||| || |   |||||||||||||    
T  26486513 ttttttttctttagtacacgtatgagttttt-tctaaactctagttctactttctggaaataaatttgatgctatcaaaccatcatcaatttgtataatc 26486415  T
Q  409 acttaatc 416  Q
    ||||||||    
T  26486414 acttaatc 26486407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 162; Significance: 3e-86; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 184 - 454
Target Start/End: Original strand, 16493 - 16771
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 281  Q
    |||||| |||||||||||||||||||||| ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | |    
T  16493 caggcctggccttgagggtgtgcaaggtgctcaaccagaccgggcctccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccact 16592  T
Q  282 taaataaaaaatatatatgt-tatatcat---tttctttc-tttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcgg 376  Q
    ||||||||| |||||||| | ||||| ||   ||| | || ||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||    
T  16593 taaataaaagatatatatatatatattatatctttatatcctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcgg 16692  T
Q  377 atcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaac 454  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16693 atcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaac 16771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 160; Significance: 4e-85; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 195 - 458
Target Start/End: Original strand, 13474427 - 13474695
Alignment:
Q  195 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaa---- 290  Q
    |||||||||||||||||| | ||| |||| ||| |||||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||||||||        
T  13474427 ttgagggtgtgcaaggtgcttaaccaggctgggtctccaaatgttatgggcctttaacgaaaaattaaatctaatactcaccccacttaaataaaaaaaa 13474526  T
Q  291 aatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatca 390  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||   |||| |||||||||||  |||||||| |||||||||||||||||||| ||    
T  13474527 aatatatatattatatcattttttttctttagtacacgtttgagtttttttctaaactctagttctcttttttgtacataaatcggatcctatcaaacca 13474626  T
Q  391 cccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcacaacaatc 458  Q
    ||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  13474627 cccctaatttgtataatcacttaatcagtcaatttgaaaagttgtttcattgaaagaatcacaacaatc 13474695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 183 - 458
Target Start/End: Original strand, 13423648 - 13423929
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccat 280  Q
    |||||||| ||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |   ||||     
T  13423648 tcaggccccgccttgagggtgtgcaaggtgctcaaccaggcggggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacctatctcccac 13423747  T
Q  281 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgag---tttaaatctagactctagttcttctttttgtatataaatcgga 377  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||| ||||   |||   | ||||||||||||||  |||||||| ||||||||||    
T  13423748 ttaaataaaaaatatatatgttatatccttttctttctttagcacacgtatgagttttttttttttagactctagttctcttttttgtacataaatcgga 13423847  T
Q  378 tcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||| ||  ||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  13423848 tcctatcaaaccattcctaatttgtataatcacttaatcaatcaatttagaaagctatttcattgaaagaatcacaacaatc 13423929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 26378052 - 26377773
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc---at 280  Q
    |||| |||| ||||||||||||||||||| ||||| ||| ||||||| |||||  |||||| |||||||||||||||||||||||||  ||||||   |     
T  26378052 caggaccggtcttgagggtgtgcaaggtgctcaaccaggtcgggccttcaaattctacgggtctctaacgaaaaattaaatctaataatcacccccccac 26377953  T
Q  281 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatc 379  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||   | ||||||||||||||| ||||||||| ||||||| ||||    
T  26377952 ttaaataaaaaatatatatgttatatttttttctttctttagtacacgtttgagttttttttctagactctagttctcctttttgtacataaatcagatc 26377853  T
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||||||    
T  26377852 ctatcaaaccacccctaatttgtataatcacttattcagtcaatgtgagaagctatttcattgaaagaatcacaacaatc 26377773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 220 - 458
Target Start/End: Original strand, 13656033 - 13656275
Alignment:
Q  220 aggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccatttaaataaaaaatatatatgttatatcattttctttct 318  Q
    |||| ||||||||||||  | |||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  13656033 aggctgggcctccaaatacttcgggcctctaacgaaaaattaaatctaataaccacctccacttaaataaaaaatatatatgttatatcattttctttct 13656132  T
Q  319 ttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct---atcaaatcacccctaatttgtataatcacttaat 415  Q
    |||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||   |  ||| || ||||||||||||||||||||||||    
T  13656133 ttagtacacgtttgagttt-tttctagactctagttctcctttttgtacataaatcggatcctaaaaaaaaaccatccctaatttgtataatcacttaat 13656231  T
Q  416 cagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  13656232 cagtcaatttgaaaagttatttcattgaaagaatcacaacaatc 13656275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 186 - 454
Target Start/End: Complemental strand, 36718841 - 36718570
Alignment:
Q  186 ggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccattta 283  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||| | |  |||| |||    
T  36718841 ggcccggctttgaggatgtgcaaggtgctcaactaggccgggcctccgaatgctacgggtctctaacgaaaaat-aaatctaatactctctccccactta 36718743  T
Q  284 aataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatccta 382  Q
    |||||||||||||||||||||||  |||||||| |||||||||||| |||||||   | ||||||||||||||| ||||||||| || ||||||||||||    
T  36718742 aataaaaaatatatatgttatattcttttctttttttagtacacgtgtgagttttttttctagactctagttctcctttttgtacatgaatcggatccta 36718643  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaac 454  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| |||| || || |||||||||||||||||    
T  36718642 tcaaaccacccctaatttgtataatcatttaatcagtcaatttgtaaagttattttattgaaagaatcacaac 36718570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 194 - 457
Target Start/End: Original strand, 12661102 - 12661373
Alignment:
Q  194 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc--catttaaataaaaa 291  Q
    ||||||||||||||||||| ||||| ||  |||||||||||||| ||||| |||| | | ||||||||||||||||| | ||||  || |||||||||||    
T  12661102 cttgagggtgtgcaaggtgctcaaccagatcgggcctccaaatgctacggacctcaatcaaaaaattaaatctaatatctaccctccacttaaataaaaa 12661201  T
Q  292 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctag------ttcttctttttgtatataaatcggatcctatca 385  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||      || || |||||||||||||||||||| ||||||    
T  12661202 atatatatgttatttcattttctttctttagtacacgtttgagttt-tttctagactctagtttttttttttttttttgtatataaatcggattctatca 12661300  T
Q  386 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    || |||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  12661301 aaccacctctaatttgtataatcacttaaccagtcaatttggaaagctatttcattgaaagaatcacaacaat 12661373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 182 - 402
Target Start/End: Original strand, 8398766 - 8398989
Alignment:
Q  182 ttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--a 279  Q
    |||||||||||  |||||||||||||||||| ||||  ||||||| |||||||||| |||||||| |||||||||||||||||||||||| ||||||  |    
T  8398766 ttcaggcccggt-ttgagggtgtgcaaggtgctcaatcaggccggacctccaaatgctacgggcccctaacgaaaaattaaatctaatactcacccccca 8398864  T
Q  280 tttaaataaaaaatat--atatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcgga 377  Q
     |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||   | ||||||||||||||  |||||||| ||||||||||    
T  8398865 cttaaataaaaaatatatatatgttatatccttttctttctttagtacacgtttgagtttttttttagactctagttctcatttttgtacataaatcgga 8398964  T
Q  378 tcctatcaaatcacccctaatttgt 402  Q
    |||||||||| ||||||||||||||    
T  8398965 tcctatcaaaccacccctaatttgt 8398989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 183 - 458
Target Start/End: Complemental strand, 19099592 - 19099313
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 280  Q
    |||| |||| ||||| ||| |||||||||| ||||| ||| |||||||||||||  |||||||||| ||| ||||||||| |||||||||||||||  ||    
T  19099592 tcagacccgcccttgtgggagtgcaaggtgctcaaccaggtcgggcctccaaatactacgggcctcaaacaaaaaattaagtctaatacccaccccccat 19099493  T
Q  281 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatct--agactctagttcttctttttgtatataaatcggat 378  Q
    |||||||||||| | || ||||||||| ||||| || ||  | ||| ||||||||||   | |  ||||| ||||||| ||||||||| ||||||| |||    
T  19099492 ttaaataaaaaaaa-atgtgttatatccttttcctttttcggcacatgtttgagtttttttttttagactatagttctcctttttgtacataaatctgat 19099394  T
Q  379 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||| || |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  19099393 cctatcaaaccatccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattgaaagaatcacaacaatc 19099313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 241 - 417
Target Start/End: Original strand, 26311851 - 26312029
Alignment:
Q  241 cgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttta 338  Q
    |||||||||||||||||||||||||||||||| |||||  | ||||||||||||||||||||||||||| || | |  ||||||||| |||||||||||     
T  26311851 cgggcctctaacgaaaaattaaatctaatacctacccccaacttaaataaaaaatatatatgttatatctttatatc-ctttagtactcgtttgagtttt 26311949  T
Q  339 aat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatca 417  Q
      | ||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  26311950 ttttctagattctagttcttctttttgtacataaatcggatcctatcaaaccacccataatttgtataatcacttaatca 26312029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 458
Target Start/End: Original strand, 43511423 - 43511683
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccattt 282  Q
    |||||||||||||||||| |||||||||| ||||  | ||||| |||||||| | || |||||||  |  ||||||||||||||||||||||| ||| ||    
T  43511423 caggcccggccttgagggagtgcaaggtgctcaatcaagccggacctccaaaagctatgggcctcaga--aaaaattaaatctaatacccacctccactt 43511520  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    |||||||||||||||||||||           |||||||   |||||||||||||   |||||||| ||||||| || | || | ||||||| | | |||    
T  43511521 aaataaaaaatatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctcctatctggacataaatctggtacta 43511606  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  43511607 tcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaatcacaacaatc 43511683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 4734840 - 4734581
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccattta 283  Q
    |||||||||||||||||| ||||||  || ||||  | |||||||||||||| | || |||||||  |  ||||||||| |||||||||||||||| |||    
T  4734840 caggcccggccttgagggagtgcaaaatgctcaatcaagccgggcctccaaaagctatgggcctcata--aaaaattaactctaatacccaccccactta 4734743  T
Q  284 aataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctat 383  Q
    ||||||||||||||||||||       |||||       |||| ||||||||||   |||||||| ||||||| || | || | ||||||| | | ||||    
T  4734742 aataaaaaatatatatgtta------cttctt-------tacatgtttgagttt-tttctagactttagttctcctatctggacataaatctggtactat 4734657  T
Q  384 caaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    |||| |||| | ||||||||||||| ||| |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  4734656 caaaccaccaccaatttgtataatcccttgatcactcaatttgaaaatctatttcattgaaagaatcacaacaatc 4734581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 10591529 - 10591272
Alignment:
Q  184 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 282  Q
    |||||||||||||||||| |||||||||| ||||  | |||||||||||||| | || |||| | ||  ||||||| || ||||||||||||||| ||||    
T  10591529 caggcccggccttgagggagtgcaaggtgctcaatcaagccgggcctccaaaagctatgggctt-ta--gaaaaatcaactctaatacccacccccattt 10591433  T
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 382  Q
    ||||||||||||||| |            ||||| ||||   |||||||||||||   |||||||| ||||||| || | || | ||||||  | | |||    
T  10591432 aaataaaaaatatatgt------------tcttttttta---cacgtttgagttttt-tctagactttagttctcctatctgaacataaatatggtacta 10591349  T
Q  383 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  10591348 tcaaaccacccccaatttgtataatcacttaatcagttaatttgaaaagttatttcattgaaagaatcacaacaatc 10591272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 341 - 457
Target Start/End: Original strand, 138091 - 138208
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 439  Q
    |||||||||||||||| ||||| | | ||||||  ||| |||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||    
T  138091 tctagactctagttctacttttcggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcat 138190  T
Q  440 tgaaagaatcacaacaat 457  Q
    ||||| ||||||||||||    
T  138191 tgaaataatcacaacaat 138208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 323 - 458
Target Start/End: Original strand, 29156120 - 29156255
Alignment:
Q  323 tacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 422  Q
    |||||||||||||||   |||||||| ||||| | || | || | ||||||| | | |||||||| ||||||||||||||||||||||||||||||||||    
T  29156120 tacacgtttgagttttt-tctagactatagttatcctatctgaacataaatctggtactatcaaaccacccctaatttgtataatcacttaatcagtcaa 29156218  T
Q  423 tttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||| ||||| || ||||||||||||||||||||||||    
T  29156219 tttaaaaagttatttcattgaaagaatcacaacaatc 29156255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 458
Target Start/End: Original strand, 20975788 - 20976050
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccatt 281  Q
    ||||||||| | ||||||| |||||||||| ||||  | |||||||||||||| | || |||||||    |||||||||| ||||||||||||| ||| |    
T  20975788 tcaggcccgactttgagggagtgcaaggtgctcaatcaagccgggcctccaaaagctatgggcctca---gaaaaattaactctaatacccacctccact 20975884  T
Q  282 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcc 380  Q
    ||||||||||||||||||||||           |||||||   |||||||||||||   | ||||||| |||||||  | | |  | ||||||  | | |    
T  20975885 taaataaaaaatatatatgttac----------ttcttta---cacgtttgagttttttttctagactttagttctcttatcttgacataaatttggtac 20975971  T
Q  381 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||| |||| | |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20975972 tatcaaaccaccaccaatttgtataatcatttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatc 20976050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 42291959 - 42291880
Alignment:
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  42291959 ctatcaaatcaccaccaatttgtataatcacttaatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatc 42291880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 341 - 458
Target Start/End: Complemental strand, 17514053 - 17513935
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 439  Q
    |||||||| ||||||| || | || ||||||||| | | ||| |||| |||||| |||||||||||||||||||||||||||||||||||| || ||||     
T  17514053 tctagactttagttctcctatctggatataaatctggtactaacaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagttatttcac 17513954  T
Q  440 tgaaagaatcacaacaatc 458  Q
    |||||||||||||||||||    
T  17513953 tgaaagaatcacaacaatc 17513935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 448
Target Start/End: Original strand, 27351179 - 27351404
Alignment:
Q  227 gcctccaaatgttacgggcctctaacgaaaaattaaa-tctaatacccaccccat--ttaaataaaa-aatatatatgttatatcattttctttctttag 322  Q
    |||||||||||||| ||||||| ||  | ||||| || |||||||| |||||| |  || ||||||| || ||||||||||  || ||||||||||| ||    
T  27351179 gcctccaaatgttatgggcctcaaaaaataaatttaagtctaatactcaccccctacttgaataaaataaaatatatgttacttccttttctttcttcag 27351278  T
Q  323 tacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 422  Q
    || ||||||||| ||   |||||||||||||||| |||| || | ||||||  | | |||||||| |||| | ||||||||||| |||||||||||||||    
T  27351279 tatacgtttgagatttt-tctagactctagttctcctttctgaacataaatttggtgctatcaaaccacctccaatttgtataaccacttaatcagtcaa 27351377  T
Q  423 tttgaaaagcta-ttcattgaaagaat 448  Q
    |||| |||| || ||||||||||||||    
T  27351378 tttggaaagttatttcattgaaagaat 27351404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 457
Target Start/End: Original strand, 18873458 - 18873521
Alignment:
Q  395 taatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  18873458 taatttgtataaccacttaatcagccaatttgaaaagctatttcattgaaagaatcacaacaat 18873521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 341 - 458
Target Start/End: Original strand, 931327 - 931440
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctattcatt 440  Q
    |||||||| |||||||  ||| | |||||||||  ||| |||| ||||||| || ||||||||||||||||||||||||||||||  ||||||    |||    
T  931327 tctagactatagttctcttttctatatataaatttgatgctattaaatcacacccaatttgtataatcacttaatcagtcaatttagaaagct----att 931422  T
Q  441 gaaagaatcacaacaatc 458  Q
    ||||||||||||| ||||    
T  931423 gaaagaatcacaataatc 931440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 458
Target Start/End: Original strand, 40956217 - 40956378
Alignment:
Q  292 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 391  Q
    ||||||||||||  || |||||||||||     |||||||||||||   |||||||||||||||| |||| || | ||||||| ||| | ||||||        
T  40956217 atatatatgttacttctttttctttctt-----cacgtttgagttttt-tctagactctagttctcctttgtggacataaatctgatgcaatcaaacatt 40956310  T
Q  392 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    | | |||||||||||||||||||||| | |||||||||| ||| |||||| |||||||||||||||||    
T  40956311 ctccaatttgtataatcacttaatcatttaatttgaaaaactatttcattaaaagaatcacaacaatc 40956378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 403 - 458
Target Start/End: Complemental strand, 3349784 - 3349728
Alignment:
Q  403 ataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  3349784 ataatgacttaatcagtcaatttgaaaagctatttcatagaaagaatcacaacaatc 3349728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 5829387 - 5829448
Alignment:
Q  396 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||||||||    
T  5829387 aatttgtataatcacttaatcagtcaattt--aaagctatttcattaaaagaatcacaacaatc 5829448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 417
Target Start/End: Complemental strand, 8379691 - 8379562
Alignment:
Q  287 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 386  Q
    |||||| | ||||||||| || |||||||||||  |||||| |||||||||   ||||||||||  ||||  ||| || | ||||||  |||  ||||||    
T  8379691 aaaaaaaaaatatgttatttctttttctttcttcggtacacatttgagttttt-tctagactctcattctcatttatggacataaatatgatgttatcaa 8379593  T
Q  387 atcacccctaatttgtataatcacttaatca 417  Q
    ||||||||||||||||||||| |||||||||    
T  8379592 atcacccctaatttgtataattacttaatca 8379562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 10033493 - 10033607
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaat-cagtcaatttgaaaagcta-ttca 438  Q
    |||||||||||||||| |||| |||| ||||||  ||| |||||||| | ||   |||||||||||||||| | |  |||||||||||||||||| || |    
T  10033493 tctagactctagttctactttctgtacataaatttgatgctatcaaacccccatcaatttgtataatcactgattaaagtcaatttgaaaagctatttta 10033592  T
Q  439 ttgaaagaatcacaa 453  Q
    |||||||||||||||    
T  10033593 ttgaaagaatcacaa 10033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 397 - 457
Target Start/End: Original strand, 17325847 - 17325909
Alignment:
Q  397 atttgtataatcacttaatcagtcaatttg-aaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||| |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  17325847 atttgaataatcacttaatcagtcaatttgaaaaaactatttcattgaaagaatcacaacaat 17325909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 42292131 - 42292022
Alignment:
Q  192 gccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac-cccatttaaataaaa 290  Q
    |||||||||| |||||||||| |||| ||| ||||||||||||| | ||  ||||||  |  ||||||||| |||||||| ||| |||| ||||||||||    
T  42292131 gccttgagggagtgcaaggtgctcaattag-ccgggcctccaaaagctataggcctcaga--aaaaattaactctaatactcacgcccacttaaataaaa 42292035  T
Q  291 aatatatatgtta 303  Q
    |||||||||||||    
T  42292034 aatatatatgtta 42292022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 457
Target Start/End: Complemental strand, 7390460 - 7390400
Alignment:
Q  398 tttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    |||||||||||||||||||||||||||| ||||| || ||||| ||||||||||| |||||    
T  7390460 tttgtataatcacttaatcagtcaatttaaaaagttatttcatcgaaagaatcacgacaat 7390400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 17514138 - 17514092
Alignment:
Q  254 aaaaattaaatctaataccca-ccccatttaaataaaaaatatatat 299  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  17514138 aaaaattaaatctaatacccacccccacttaaataaaaaatatatat 17514092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 33281677 - 33281739
Alignment:
Q  397 atttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||||||||||||| ||||||||| ||||| || ||||||||||||||| ||| ||||    
T  33281677 atttgtataatcacttaattagtcaatttaaaaagttatttcattgaaagaatcccaataatc 33281739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 274 - 436
Target Start/End: Original strand, 23069099 - 23069262
Alignment:
Q  274 accccatttaaataaa--aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataa 371  Q
    |||||| |||||||||  ||| ||||||||||  || |||||||||||   |||||||||| ||||   | || |||||| |||| |||| || | ||||    
T  23069099 accccacttaaataaataaaagatatatgttacttctttttctttcttcgttacacgtttgtgttttttt-tatactctaattctcctttctgaacataa 23069197  T
Q  372 atcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 436  Q
    ||  ||| ||| |||| |||||| ||||||||||||| |||||||| || ||||| |||||||||    
T  23069198 atatgatgctagcaaaccacccccaatttgtataatcccttaatcattcgatttggaaagctatt 23069262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 37029108 - 37029054
Alignment:
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 436  Q
    ||||||||||| ||  |||||||||||||||||||||| ||||||| ||||||||||    
T  37029108 ctatcaaatcatcc--aatttgtataatcacttaatcaatcaatttaaaaagctatt 37029054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 457
Target Start/End: Original strand, 16515533 - 16515588
Alignment:
Q  403 ataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 457  Q
    ||||||||||||||| ||||||||||||  || || ||||||||||||||||||||    
T  16515533 ataatcacttaatcaatcaatttgaaaaattattttattgaaagaatcacaacaat 16515588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 29156062 - 29156113
Alignment:
Q  254 aaaaattaaatctaatacccacc-ccatttaaat-aaaaaatatatatgtta 303  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  29156062 aaaaattaaatctaatacccacctctatttaaataaaaaaatatatatgtta 29156113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 331
Target Start/End: Original strand, 40778675 - 40778785
Alignment:
Q  224 cgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaa-aatatatatgttatatcattttctttcttt 320  Q
    |||||||||||| |||| | ||||| ||| ||| ||||| |||||||| ||||||  | |||||||||| || ||||||||||  || |||||||||||     
T  40778675 cgggcctccaaaagttatgagcctcaaacaaaatattaagtctaatactcaccccctacttaaataaaataaaatatatgttacttccttttctttcttg 40778774  T
Q  321 agtacacgttt 331  Q
    ||| |||||||    
T  40778775 agtgcacgttt 40778785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 458
Target Start/End: Original strand, 40779139 - 40779256
Alignment:
Q  341 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt-cat 439  Q
    |||||| ||||||||| |||| || | ||||||  |||  |||||||  | ||| |||||||||||||  ||||| |||||||||||||| ||||| |||    
T  40779139 tctagagtctagttctcctttctgaacataaatttgatgttatcaaactatccccaatttgtataatcgtttaataagtcaatttgaaaaactattccat 40779238  T
Q  440 tgaaagaatcacaacaatc 458  Q
    || | ||||||||||||||    
T  40779239 tg-aggaatcacaacaatc 40779256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 3349917 - 3349869
Alignment:
Q  255 aaaattaaatctaatacccaccccatttaaataaaaaatatatatgtta 303  Q
    |||||||| | ||||||||||| || |||||||||||||| ||||||||    
T  3349917 aaaattaattgtaatacccacctcacttaaataaaaaatacatatgtta 3349869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 283 - 458
Target Start/End: Complemental strand, 17307 - 17131
Alignment:
Q  283 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagt-ttaaatctagactctagttcttctttttgtatataaatcggatcct 381  Q
    ||||||||||||||||||||||| | || | |  ||||||||||||||||| | ||   ||||||||||||||||  |||||||||||||||||||||||    
T  17307 aaataaaaaatatatatgttataactttatatc-ctttagtacacgtttgaatgttttttctagactctagttctcatttttgtatataaatcggatcct 17209  T
Q  382 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  17208 atcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcgttgaaagaatcacaacaatc 17131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 183 - 291
Target Start/End: Complemental strand, 18238 - 18128
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccat 280  Q
    |||| ||| |||||||||||||| |||||| ||||  ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||  ||||||    
T  18238 tcagtcccagccttgagggtgtgaaaggtgttcaatcaggccgggcctccaaatgttatgggcctttaacgaaaaattaaatctaatactcaccccccat 18139  T
Q  281 ttaaataaaaa 291  Q
    |||||||||||    
T  18138 ttaaataaaaa 18128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 183 - 375
Target Start/End: Complemental strand, 23041 - 22846
Alignment:
Q  183 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccat 280  Q
    |||||||  ||||| |||||||| |||||| ||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||| |||||  |||     
T  23041 tcaggccttgccttcagggtgtgtaaggtgctcaaccaggccggacctccaaatgatacgggtctctaacgaaaaattaaatctaatatccaccctccac 22942  T
Q  281 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgag-tttaaatctagactctagttcttctttttgtatataaatcg 375  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||   | ||||||||| |||| ||||||||| ||||||||    
T  22941 ttaaataaaaaatatatatgttatatccttttatttctttagtacacgtttgagttttttttgtagactctaattctcctttttgtacataaatcg 22846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 203 - 458
Target Start/End: Complemental strand, 46429 - 46172
Alignment:
Q  203 gtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaa-ttaaatctaatacccaccc-catttaaataaaaaatatatatg 300  Q
    |||||||||| ||||| ||||||| ||| ||||||  | ||||||| ||| ||||| |||| |||||||||||| | || |||||||||||| | | |||    
T  46429 gtgcaaggtgctcaaccaggccggaccttcaaatgccatgggcctcaaacaaaaaaattaagtctaatacccacacacacttaaataaaaaaaaaa-atg 46331  T
Q  301 ttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaattt 400  Q
    |||||||||||| ||||||  |||||| ||||| |||   ||||||||||||||||  ||||| || ||| ||| |||||||||||| ||||| ||||||    
T  46330 ttatatcattttatttcttcggtacacatttgaatttttttctagactctagttctcatttttatacatatatctgatcctatcaaaccacccataattt 46231  T
Q  401 gtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 458  Q
    | |||||||||||||||||||||||| ||  ||| |||||||||| |||||||||||||    
T  46230 ggataatcacttaatcagtcaatttggaagtctatttcattgaaataatcacaacaatc 46172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 300 - 409
Target Start/End: Original strand, 979 - 1088
Alignment:
Q  300 gttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatt 399  Q
    |||||||| |||| |||||||| |||| ||||||||||   |||||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||    
T  979 gttatatccttttatttctttattacatgtttgagtttttttctagactctagttctcctttttgtgcataaatcggatcctatcaaaccacccctaatt 1078  T
Q  400 tgtataatca 409  Q
    ||||||||||    
T  1079 tgtataatca 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 458
Target Start/End: Original strand, 1086 - 1126
Alignment:
Q  419 tcaatttgaaaagctatt-cattgaaagaatcacaacaatc 458  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  1086 tcaatttggaaagctatttcattgaaagaatcacaacaatc 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 8473 - 8399
Alignment:
Q  380 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaa 453  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||  ||| ||| |||||||||||||||||||    
T  8473 ctatcaaaccacccataatttgtataatcaattaatcagtcaatttcgaaaactatttcattgaaagaatcacaa 8399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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