View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14796_low_1 (Length: 490)
Name: NF14796_low_1
Description: NF14796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14796_low_1 |
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Alignment Details
Target: chr6 (Bit Score: 430; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 20 - 473
Target Start/End: Original strand, 29006396 - 29006849
Alignment:
| Q |
20 |
ttgtgtggacctgaagctatagaataggaacaagttgaagcaaactagcaatggcatgaatcaagatttagagtcctgacgaaggggatgggagttgaac |
119 |
Q |
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| T |
29006396 |
ttgtgtggacctgaagctatagaataggaacaagttgaagcaaactagcaatggcatgaatcaagatttagagtcctgacgaaggggatgggagttgaat |
29006495 |
T |
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| Q |
120 |
ctactccctttaaggaccatgaatcaactatttatcaattaaacctacctatatgttacatgtatacccattaaaaatgatttggagaagttcatttcat |
219 |
Q |
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| T |
29006496 |
ctactccctttaaggaccatgaatcaactatttatcaattaaaccaacctatatgttacatgtttacccattaaaaatgatttggagaatttcatttcat |
29006595 |
T |
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| Q |
220 |
taggtgaaacaattttttcttcaaaaattggatattctctagcacagcagcaaacactaatctctaaattgagtagaatgacaattgactgcaaaatact |
319 |
Q |
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| T |
29006596 |
taggtgaaacaattttttcttcaaaaattggatattctctagcacagcagcaaacactaatctctaaattgagtagaatgacaattgactgcaaaatact |
29006695 |
T |
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| Q |
320 |
ccttatgagttttaacattgttgaaattttagaccagtttgttcaaacacacgaccactaaagctgaaagagatatgtatcagtaatcacattatccaaa |
419 |
Q |
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| T |
29006696 |
ccttatgagttttaacattgttgaaattttagaccagattgttcaaacacacgaccactaaagctgaaagagatatgtatcagtaatcacattatccaaa |
29006795 |
T |
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| Q |
420 |
tgctctgatgaaaccatttcaagtacatgccactcagactagcatggaattttt |
473 |
Q |
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| T |
29006796 |
tgctttgatgaaaccatttcaagtacatgccactcagactagcatggaattttt |
29006849 |
T |
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