View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14798_high_20 (Length: 275)
Name: NF14798_high_20
Description: NF14798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14798_high_20 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 6 - 273
Target Start/End: Original strand, 17280077 - 17280345
Alignment:
| Q |
6 |
ttttaatttctctgctgcaaaacattaatatgtttttcctacttttataaactcaaacttt-gaagaatttaagcatcaaattgttgtataaatttattg |
104 |
Q |
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| T |
17280077 |
ttttaatttctctgctgtaaaacattaatatgtttttcctacttttatcaattcaaacttttgaagaatttaagcatcaaatcattgtataaatttattg |
17280176 |
T |
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| Q |
105 |
atatatattgcaggagcctgagtcaagtgcatgctttcttagtgacatatcaaatgaagaaaacgattgtagaactaccaaatatctaaatctcccattc |
204 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17280177 |
ctatatattgcaggagcctgagtcaagtgcatgctttcttagtgacatatcaaatgaagaaaacgattgtagaactaccaaatatctaaatctcccattc |
17280276 |
T |
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| Q |
205 |
cctttcagttctctgataattccaatggtgcatagtgatcaaggcataacacatttttcttcaccaaat |
273 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17280277 |
cctttcagttctctgataattccgatggtgcatagtgatcaaggcataacacatttttcttcaccaaat |
17280345 |
T |
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