View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14798_high_21 (Length: 260)

Name: NF14798_high_21
Description: NF14798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14798_high_21
NF14798_high_21
[»] scaffold0164 (1 HSPs)
scaffold0164 (12-195)||(4799-4982)
[»] chr6 (7 HSPs)
chr6 (12-236)||(19215060-19215288)
chr6 (12-190)||(13548608-13548792)
chr6 (12-110)||(31876743-31876840)
chr6 (158-211)||(7457415-7457468)
chr6 (12-106)||(7457257-7457350)
chr6 (22-105)||(18700832-18700915)
chr6 (158-211)||(31876629-31876682)
[»] chr3 (3 HSPs)
chr3 (12-215)||(6079471-6079662)
chr3 (12-228)||(11028373-11028590)
chr3 (12-113)||(11441041-11441142)
[»] scaffold0017 (1 HSPs)
scaffold0017 (26-214)||(38864-39053)
[»] chr4 (1 HSPs)
chr4 (12-211)||(51030429-51030621)
[»] chr2 (2 HSPs)
chr2 (22-139)||(24864168-24864287)
chr2 (169-211)||(13652778-13652820)
[»] chr8 (4 HSPs)
chr8 (12-211)||(21349673-21349878)
chr8 (55-110)||(40390116-40390171)
chr8 (55-110)||(29634211-29634266)
chr8 (36-105)||(23126451-23126520)
[»] scaffold0039 (1 HSPs)
scaffold0039 (55-110)||(83917-83972)
[»] chr1 (2 HSPs)
chr1 (55-110)||(48280307-48280362)
chr1 (12-69)||(25137646-25137704)
[»] chr5 (1 HSPs)
chr5 (22-105)||(40802119-40802202)
[»] chr7 (3 HSPs)
chr7 (60-235)||(2660029-2660203)
chr7 (25-128)||(26645844-26645938)
chr7 (158-211)||(26645734-26645787)


Alignment Details
Target: scaffold0164 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 12 - 195
Target Start/End: Complemental strand, 4982 - 4799
Alignment:
Q  12 atagaaatataatgaaacataagtaaattataacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagccctttg 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4982 atagaaatataatgaaacataagtaaattgtaacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagccctttg 4883  T
Q  112 ccattcaaaaaataattctttagcactttgcatctcaaaagcctaaaataaagttttttacataattacttcattaaaatgtat 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4882 ccattcaaaaaataattctttagcactttgcatctcaaaagcctaaaataaagttttttacataattacttcattaaaatgtat 4799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 169; Significance: 1e-90; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 12 - 236
Target Start/End: Original strand, 19215060 - 19215288
Alignment:
Q  12 atagaaatataatgaaacataagtaaattataacatcaacttgttatctaaaacctt----tcattgtgattccaattgcacaattaatctctttagccc 107  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||||||||||||||||||    
T  19215060 atagaaatataatgaaacataagaaaattataacatcaacttgttatctaaaaccttaatttcattgtgattccaaatgcacaattaatctctttagccc 19215159  T
Q  108 tttgccattcaaaaaataatt-ctttagcactttgcatctcaaaagcctaaaataaagttttttacataattacttcattaaaatgtatttcagaacatg 206  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  19215160 tttgccattcaaaaaataatttctttagcactttgcatctcagaagcctaaaataaagctttttacataattacttcattaaaatatattttagaacatg 19215259  T
Q  207 tatatatatttaccgtttgaactttctccc 236  Q
    |||||| ||||||| |||||||||||||||    
T  19215260 tatata-atttaccttttgaactttctccc 19215288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 13548608 - 13548792
Alignment:
Q  12 atagaaatataa-tgaaacataagtaaattataacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaat---ctctttagccc 107  Q
    |||||||||||| |||||| || | ||||||||| | |||   |||||||||||||||||||||||||| ||| ||||||||||||   |||||||||||    
T  13548608 atagaaatataaatgaaacttaggaaaattataataccaatccgttatctaaaacctttcattgtgatttcaaatgcacaattaataatctctttagccc 13548707  T
Q  108 tttgccattcaaaaaa-taatt-ctttagcactttgcatctcaaaagcctaaaataaagttttttacataattacttcattaaaa 190  Q
    |||||||||||||| | ||||| |||||||||||||||| ||| ||||||||| ||||||||  |||||||| ||||||||||||    
T  13548708 tttgccattcaaaagagtaatttctttagcactttgcatttcagaagcctaaagtaaagtttgctacataatcacttcattaaaa 13548792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 31876840 - 31876743
Alignment:
Q  12 atagaaatataa-tgaaacataagtaaattataacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagcccttt 110  Q
    |||||||||||| ||||||||||| ||||||||| ||||||  ||| ||||||||||  |||||||||||||| |||| ||||||||| |||||||||||    
T  31876840 atagaaatataaatgaaacataagaaaattataatatcaacccgttttctaaaacct--cattgtgattccaaatgcataattaatctttttagcccttt 31876743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 7457415 - 7457468
Alignment:
Q  158 aataaagttttttacataattacttcattaaaatgtatttcagaacatgtatat 211  Q
    |||||||||| ||||||||| ||||| ||||| |||||||||||||||||||||    
T  7457415 aataaagtttgttacataatcacttcgttaaagtgtatttcagaacatgtatat 7457468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 7457257 - 7457350
Alignment:
Q  12 atagaaatataa-tgaaacataagtaaattataacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagcc 106  Q
    |||||||||||| ||||||||||  ||||||||| ||||||  ||| || |||||||  |||||||||||||| |||| ||||||||| |||||||    
T  7457257 atagaaatataaatgaaacataaaaaaattataatatcaacccgttttcgaaaacct--cattgtgattccaaatgcataattaatctttttagcc 7457350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 18700832 - 18700915
Alignment:
Q  22 aatgaaacataagtaaattataacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagc 105  Q
    |||||||| || | ||||||||| |||||    ||||| ||||| ||||||||||||||||| |||| ||||||||||||||||    
T  18700832 aatgaaacgtagggaaattataatatcaagcctttatcgaaaacttttcattgtgattccaaatgcaaaattaatctctttagc 18700915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 31876682 - 31876629
Alignment:
Q  158 aataaagttttttacataattacttcattaaaatgtatttcagaacatgtatat 211  Q
    |||||||||| ||| ||||| ||||| ||||| |||||||||||||||||||||    
T  31876682 aataaagtttgttaaataatcacttcgttaaagtgtatttcagaacatgtatat 31876629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 8e-70; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 6079662 - 6079471
Alignment:
Q  12 atagaaatataatgaaacataagtaaattataacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagccctttg 111  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  6079662 atagaaatata-tgaaacataagaaaattataacatcaacttgttatctgaaacctttcattttgattccaaatgcacaattaatctctttagccctttg 6079564  T
Q  112 ccattcaaaaaataattctttagcactttgcatctcaaaagcctaaaataaagttttttacataattacttcattaaaatgtatttcagaacatgtatat 211  Q
    |||||||||||||||           ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6079563 ccattcaaaaaataa-----------tttgcatctcaaaggcctaaaataaagttttttacataattacttcattaaaatgtatttcagaacatatatat 6079475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 11028373 - 11028590
Alignment:
Q  12 atagaaatataa-tgaaacataagtaaattataacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagcccttt 110  Q
    |||||||||||| ||| || |||| ||||||||| |||| | |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  11028373 atagaaatataaatgatacttaagaaaattataatatcatcctgttatctaaaaccttacattgtgattccaaatgcacaattaatctctttagcccttt 11028472  T
Q  111 gccattcaaaaaataa-ttctttagcactttgcatctcaaaagcctaaaataaagttttttacataattacttcattaaaatgtatttcagaacatgtat 209  Q
    |||||||||||||||| |||| ||||||||||| | |        ||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  11028473 gccattcaaaaaataatttctctagcactttgcttgt-tttcttttaaaataaagtttgttacataatcacttaattaaaatgtatttcagaacatgtat 11028571  T
Q  210 atatatttaccgtttgaac 228  Q
    ||| ||||||| |||||||    
T  11028572 ataaatttaccttttgaac 11028590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 11441142 - 11441041
Alignment:
Q  12 atagaaatataa-tgaaacataagtaaattataacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagcccttt 110  Q
    |||||||||||| ||||| ||||| ||||||||| ||||||  |||||||||||| ||||| | ||||||||| | ||| ||||||||||||||||||||    
T  11441142 atagaaatataaatgaaatataagaaaattataatatcaacccgttatctaaaacttttcactctgattccaa-tacacgattaatctctttagcccttt 11441044  T
Q  111 gcc 113  Q
    |||    
T  11441043 gcc 11441041  T

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Target: scaffold0017 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 26 - 214
Target Start/End: Original strand, 38864 - 39053
Alignment:
Q  26 aaacataagtaaattataacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagccctttgccattcaaaaaata 125  Q
    |||| |||| ||||||||| ||||||||||||| ||||| |||||||||||||||||| |||||||||| |||||||| | | |||||||||||| ||||    
T  38864 aaacttaagaaaattataatatcaacttgttatttaaaatctttcattgtgattccaaatgcacaattattctctttatctcgttgccattcaaagaata 38963  T
Q  126 a-ttctttagcactttgcatctcaaaagcctaaaataaagttttttacataattacttcattaaaatgtatttcagaacatgtatatata 214  Q
    | ||||||||||| |||||| | | |||||||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  38964 atttctttagcaccttgcatttgagaagcctaaaataaagtttgttacataatcacttcattaaaatatatttcaaaacatgtatatata 39053  T

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Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 211
Target Start/End: Original strand, 51030429 - 51030621
Alignment:
Q  12 atagaaatataa-tgaaacataagtaaattataacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagcccttt 110  Q
    |||||||||||| ||||||||||| ||||||||| ||||||  ||| ||||||||||||         ||||| |||| ||||||||| ||||||| |||    
T  51030429 atagaaatataaatgaaacataagaaaattataatatcaacccgttttctaaaaccttt---------tccaaatgcataattaatctttttagcctttt 51030519  T
Q  111 gccattcaaaaaataatt-ctttagcactttgcatctcaaaagcctaaaataaagttttttacataattacttcattaaaatgtatttcagaacatgtat 209  Q
       ||||||||||||||| ||||| ||||||  || |||  ||| || |||||||||| ||||||||| ||||| | ||| |||||||||||||||||||    
T  51030520 tatattcaaaaaataatttctttaacactttttatttcattagcatagaataaagtttgttacataatcacttcgtcaaagtgtatttcagaacatgtat 51030619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 24864168 - 24864287
Alignment:
Q  22 aatgaaacataagtaaattataacatcaa-cttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagccctttgccattcaaa 120  Q
    ||||||||||||| ||||||||| ||||| | | ||||||||||| |||| |||||||||||| ||||||||||||||||||||| ||||| | || |||    
T  24864168 aatgaaacataaggaaattataatatcaagccttttatctaaaacttttctttgtgattccaaatgcacaattaatctctttagcactttgtcgttaaaa 24864267  T
Q  121 aaataat-tctttagcactt 139  Q
    ||| ||| |||||| |||||    
T  24864268 aaacaatctctttaacactt 24864287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 13652778 - 13652820
Alignment:
Q  169 ttacataattacttcattaaaatgtatttcagaacatgtatat 211  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  13652778 ttacataatcacttcattaaactgtatttcagaacatgtatat 13652820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 211
Target Start/End: Original strand, 21349673 - 21349878
Alignment:
Q  12 atagaaatataa-tgaaacataagtaaattataacatcaacttgttat--ctaaaacctttcattgtgattccaattgcacaattaatctctttagccct 108  Q
    |||||||||||  ||||||||||| || |||||| ||||||  |||||  || |||| ||||  ||||||| ||| | ||| |||||||| |||||||||    
T  21349673 atagaaatataggtgaaacataagaaatttataatatcaacccgttatatcttaaacatttcgctgtgatttcaaatacaccattaatctatttagccct 21349772  T
Q  109 ttgccattcaaaaaataa-ttctttagcactttgcatctcaaaagcctaaaataaagttttttacataattacttcattaaa--atgtatttcagaacat 205  Q
    ||||| || ||||||||| |||||||  ||||||||| | | ||| |||||||||| ||| ||||||| | ||||||| |||  || |||| ||||||||    
T  21349773 ttgcccttgaaaaaataatttctttaaaactttgcatttaagaagtctaaaataaaatttgttacatagtcacttcatcaaaatatatattccagaacat 21349872  T
Q  206 gtatat 211  Q
    ||||||    
T  21349873 gtatat 21349878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 40390171 - 40390116
Alignment:
Q  55 ttatctaaaacctttcattgtgattccaattgcacaattaatctctttagcccttt 110  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  40390171 ttatctaaaacatttcattgtgattccaaatgcacaattaatctctttagcgcttt 40390116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 29634266 - 29634211
Alignment:
Q  55 ttatctaaaacctttcattgtgattccaattgcacaattaatctctttagcccttt 110  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||    
T  29634266 ttatctaaaacatttcattgtgattcaaaatgcacaattaatctctttagcgcttt 29634211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 23126520 - 23126451
Alignment:
Q  36 aaattataacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagc 105  Q
    ||||||||| ||||| |  ||||| ||||| ||||||||||||||||| |||| ||||||||||||||||    
T  23126520 aaattataatatcaagtctttatcgaaaacttttcattgtgattccaaatgcaaaattaatctctttagc 23126451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 83972 - 83917
Alignment:
Q  55 ttatctaaaacctttcattgtgattccaattgcacaattaatctctttagcccttt 110  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  83972 ttatctaaaacatttcattgtgattccaaatgcacaattaatctctttagcgcttt 83917  T

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Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 48280362 - 48280307
Alignment:
Q  55 ttatctaaaacctttcattgtgattccaattgcacaattaatctctttagcccttt 110  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  48280362 ttatctaaaacatttcattgtgattccaaatgcacaattaatctctttagcgcttt 48280307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 25137704 - 25137646
Alignment:
Q  12 atagaaatataa-tgaaacataagtaaattataacatcaacttgttatctaaaaccttt 69  Q
    |||||||||||| ||||||||||| ||||||||| ||||||  ||| ||||||||||||    
T  25137704 atagaaatataaatgaaacataagaaaattataatatcaacccgttttctaaaaccttt 25137646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 40802202 - 40802119
Alignment:
Q  22 aatgaaacataagtaaattataacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagc 105  Q
    |||||||| || | ||||||||| ||||| |  ||||| ||||| ||||||||||||||||| || | ||||||||||||||||    
T  40802202 aatgaaacgtagggaaattataatatcaagtctttatcaaaaacttttcattgtgattccaaatgtaaaattaatctctttagc 40802119  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 2660203 - 2660029
Alignment:
Q  60 taaaacctttcattgtgattccaattgcacaattaatctctttagccctttgccattcaaaaaataattctttagcac--tttgcatctcaaaagcctaa 157  Q
    ||||||||||||  ||||||  || ||||||||||||| ||||||  |||||| ||| ||||||  | ||||| | ||  ||| ||| | | ||| || |    
T  2660203 taaaacctttcaccgtgatttgaaatgcacaattaatcgctttagtactttgcaatttaaaaaaataatcttttgaacatttttcattttagaagtctga 2660104  T
Q  158 aataaagttttttacataattacttcattaaaatgtatttcagaacatgtatatatatttaccgtttgaactttctcc 235  Q
    |||||||||| ||| ||||| | ||||||||| | ||||||| |||||||| |   ||||||| ||||||||||||||    
T  2660103 aataaagtttgttatataatcaattcattaaagtatatttcaaaacatgtaca---atttaccttttgaactttctcc 2660029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 26645938 - 26645844
Alignment:
Q  25 gaaacataagtaaattataacatcaacttgttatctaaaacctttcattgtgattccaattgcacaattaatctctttagccctttgccattcaaaaaat 124  Q
    |||||||||| ||||||||| |||||| |||| |||||||||||         |||||| |||| ||||||||| |||||||||||   |||||||||||    
T  26645938 gaaacataagaaaattataatatcaacatgttttctaaaacctt---------ttccaaatgcataattaatctttttagcccttttatattcaaaaaat 26645848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 26645787 - 26645734
Alignment:
Q  158 aataaagttttttacataattacttcattaaaatgtatttcagaacatgtatat 211  Q
    |||||||||| ||||||||| ||||| | ||| ||||||||||| |||||||||    
T  26645787 aataaagtttgttacataatcacttcgtcaaagtgtatttcagatcatgtatat 26645734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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