View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14798_high_23 (Length: 235)
Name: NF14798_high_23
Description: NF14798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14798_high_23 |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 45745516 - 45745724
Alignment:
| Q |
11 |
agagagaagaagaaagctttaatagtagtttccacaaaaaacattcctcacagaaaagcacaaaatgcaataagagacaactaaacgaaaaatcgatggt |
110 |
Q |
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| T |
45745516 |
agagaaaagaagaaagctttaatagtagtttccacaaaaaacattcctcacagaaaagcacaaaatgcaataagagacaactaaacgaaaaatcgatggt |
45745615 |
T |
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| Q |
111 |
cgatgacaaaaatggtgttccaactgtgaacaagtttgatgaatcaagtaggtcattttttccggatgacgattatatagtattctgctttgataaagat |
210 |
Q |
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| T |
45745616 |
cgatgacaaaaatggtgttccaactgtgaacaagtttgatgaatcaagtaggtcattttttccggatgacgattatatagtattctgctttgataaagat |
45745715 |
T |
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| Q |
211 |
ggaccattt |
219 |
Q |
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| T |
45745716 |
ggaccattt |
45745724 |
T |
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