View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14798_low_36 (Length: 209)
Name: NF14798_low_36
Description: NF14798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14798_low_36 |
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Alignment Details
Target: chr3 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 3564180 - 3564005
Alignment:
| Q |
16 |
tatactcaaggggagaccaaaagcttgctatctgcaacctatagcagataaggtgaagtccaaattatcagcctggaaagcatcattattgtcaattgca |
115 |
Q |
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| T |
3564180 |
tatattcaaggggagaccaaaagcttgctatctgcaacctatagcagataaggtgaagtccaaattatcagcctggaaagcatcattattgtcaattgca |
3564081 |
T |
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| Q |
116 |
ggaagagtacaacttgtaaagtcagttgttactagcatgctgactcatacttttgcaatatattcctggccaattt |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3564080 |
ggaagagtacaacttgtaaagtcagttgttactagcatgctgactcatacttttgcaatatattcctggccaattt |
3564005 |
T |
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