View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14798_low_6 (Length: 490)
Name: NF14798_low_6
Description: NF14798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14798_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 412; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 412; E-Value: 0
Query Start/End: Original strand, 9 - 440
Target Start/End: Complemental strand, 47041806 - 47041376
Alignment:
| Q |
9 |
tccaagaatatcagcaatcaacaaatttctctcaattgaaccaagagttgtatccacaggtgatagaagagacatagcttctattccatttagcttcaat |
108 |
Q |
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| T |
47041806 |
tccaacaatagcagcaatcaacaaatttctctcaattgaaccaagagttgtatccacaggtgatagaagagacatagcttctattccatttagcttcaat |
47041707 |
T |
|
| Q |
109 |
tcatccaatgtataaagcctttgaggaacctgcacagtaattcacacaacaaatgaaacaagctacaaatacagtccctaatcttttatattcctaactt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
47041706 |
tcatccaatgtataaagcctttgaggaacctgcacagtaattcacacaacaaatgaaacaagctacaaatacagtccctaatcttt-atattcctaactt |
47041608 |
T |
|
| Q |
209 |
cataactcaagactaacatcaaggatcattaatgtcactttaattaaccaacctgtctagccgcaccgaaacactgaagcccgttgggtttgccttgtaa |
308 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47041607 |
cataactcaagactaacatcaaggatcattagtgtcactttaattaaccaacctgtctagccgcaccgaaacactgaagcccgttgggtttgccttgtaa |
47041508 |
T |
|
| Q |
309 |
atccttaacaagtgcaagagcagctctatcatcccctttagttagctccttgtctacactttcaagcaattgttgtctgctgctagaaaccttggtggag |
408 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47041507 |
atccttaacaagtgcaagagcagctctatcatcccctttagttagctccttgtctacactttcaagcaattgttgtctgctgctagaaaccttggtggag |
47041408 |
T |
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| Q |
409 |
cattggattctcacccttgcaagtttaggttg |
440 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
47041407 |
cattggattctcacccttgcaagtttaggttg |
47041376 |
T |
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