View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1479_low_10 (Length: 320)
Name: NF1479_low_10
Description: NF1479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1479_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 10 - 303
Target Start/End: Complemental strand, 6060441 - 6060148
Alignment:
| Q |
10 |
catcatcaagtttttgttagatgataacagtgatgatggtgaagaagtgattgtgatacctattgtgggaatgggaggggtaggaaaaactactttagct |
109 |
Q |
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| T |
6060441 |
catcatcaagtttttgttagatgataacagtgataatggtgaagaagtgattgtgatacctattgtgggaatgggaggggtaggaaaaactactttagct |
6060342 |
T |
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| Q |
110 |
cagttggtgtacaatgacgagtatttgaagcatgtatttgattttaaagcttgggtttgtgtttctgaagagtttgacattttgagggttacaaagatta |
209 |
Q |
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| T |
6060341 |
cagttggtgtacaatgatgagtatttgaagcatgtatttgattttaaagcttgggtttgtgtttctgaagagtttgacattttgagggttacaaagatta |
6060242 |
T |
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| Q |
210 |
taacacaagcaattacaagaagaacttgtgaaatgaatgatctaaatttacttcaacttgatttgcaagatatgttgaaagaaaagaaattctt |
303 |
Q |
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| T |
6060241 |
taacacaagcaattacaagaagaacttgtgaaatgaatgatctaaatttacttcaacttgatttgcaagatatgttgaaagaaaagaaattctt |
6060148 |
T |
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