View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1479_low_21 (Length: 257)

Name: NF1479_low_21
Description: NF1479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1479_low_21
NF1479_low_21
[»] chr5 (60 HSPs)
chr5 (1-240)||(17574322-17574561)
chr5 (1-240)||(7267847-7268086)
chr5 (1-240)||(34327639-34327879)
chr5 (1-239)||(30468160-30468399)
chr5 (15-240)||(2179791-2180017)
chr5 (34-240)||(36057526-36057733)
chr5 (1-240)||(8539679-8539919)
chr5 (1-240)||(18624888-18625128)
chr5 (8-240)||(2854215-2854446)
chr5 (8-240)||(24541098-24541332)
chr5 (6-140)||(28819391-28819526)
chr5 (155-240)||(12738736-12738821)
chr5 (155-240)||(12801559-12801644)
chr5 (155-240)||(30463904-30463989)
chr5 (94-240)||(29621755-29621901)
chr5 (155-240)||(8541271-8541356)
chr5 (14-234)||(18728495-18728716)
chr5 (110-240)||(40780554-40780684)
chr5 (110-240)||(42473597-42473727)
chr5 (155-240)||(2852890-2852975)
chr5 (155-240)||(7269446-7269531)
chr5 (155-240)||(34328827-34328912)
chr5 (155-240)||(28813765-28813852)
chr5 (14-198)||(32087560-32087745)
chr5 (26-234)||(43317965-43318174)
chr5 (6-78)||(12737305-12737377)
chr5 (155-240)||(17577935-17578020)
chr5 (155-240)||(21842992-21843077)
chr5 (155-240)||(28822090-28822175)
chr5 (155-240)||(32134235-32134320)
chr5 (27-234)||(35395343-35395549)
chr5 (155-240)||(40782211-40782296)
chr5 (153-234)||(43492131-43492212)
chr5 (6-78)||(12800128-12800200)
chr5 (1-57)||(21841179-21841235)
chr5 (27-234)||(38177999-38178207)
chr5 (27-234)||(38205223-38205431)
chr5 (155-240)||(29620142-29620227)
chr5 (115-234)||(15459184-15459303)
chr5 (157-240)||(41493848-41493931)
chr5 (132-234)||(38596878-38596980)
chr5 (26-234)||(35292287-35292495)
chr5 (33-169)||(38597020-38597157)
chr5 (27-234)||(33256410-33256618)
chr5 (36-209)||(24496778-24496952)
chr5 (1-58)||(32135729-32135786)
chr5 (22-233)||(27075831-27076043)
chr5 (185-240)||(42471552-42471607)
chr5 (22-203)||(19997159-19997341)
chr5 (22-60)||(27349331-27349369)
chr5 (119-188)||(27349212-27349281)
chr5 (18-54)||(42473545-42473581)
chr5 (8-54)||(29621709-29621755)
chr5 (155-205)||(38176671-38176721)
chr5 (155-205)||(38203895-38203945)
chr5 (22-83)||(42620685-42620746)
chr5 (155-207)||(32089927-32089979)
chr5 (155-207)||(32835913-32835965)
chr5 (155-207)||(33257762-33257814)
chr5 (155-207)||(40330517-40330569)
[»] chr3 (86 HSPs)
chr3 (1-240)||(53190660-53190899)
chr3 (1-240)||(54898441-54898680)
chr3 (6-240)||(27898986-27899221)
chr3 (1-240)||(2226053-2226292)
chr3 (1-240)||(41977754-41977993)
chr3 (1-231)||(35905613-35905843)
chr3 (1-240)||(21348727-21348967)
chr3 (15-240)||(51684614-51684840)
chr3 (1-240)||(30599818-30600058)
chr3 (1-240)||(46112491-46112731)
chr3 (1-240)||(23293070-23293310)
chr3 (1-240)||(43765141-43765381)
chr3 (1-240)||(17515314-17515554)
chr3 (15-240)||(42279511-42279737)
chr3 (6-240)||(2377033-2377268)
chr3 (1-166)||(7884774-7884939)
chr3 (7-214)||(46197750-46197958)
chr3 (1-240)||(600729-600953)
chr3 (15-179)||(48830720-48830885)
chr3 (18-240)||(44794212-44794434)
chr3 (1-170)||(44276096-44276266)
chr3 (8-240)||(3152125-3152358)
chr3 (21-238)||(2660218-2660436)
chr3 (1-198)||(19987497-19987692)
chr3 (155-240)||(23291574-23291659)
chr3 (33-234)||(23774162-23774363)
chr3 (155-240)||(2378983-2379068)
chr3 (27-234)||(45257126-45257334)
chr3 (155-240)||(611222-611307)
chr3 (155-240)||(38193510-38193595)
chr3 (155-240)||(41979352-41979437)
chr3 (155-240)||(46308811-46308896)
chr3 (155-240)||(53094273-53094358)
chr3 (27-234)||(18430177-18430385)
chr3 (24-234)||(31887355-31887566)
chr3 (27-234)||(48633887-48634099)
chr3 (155-240)||(3150256-3150341)
chr3 (14-234)||(23888665-23888886)
chr3 (155-240)||(54900074-54900159)
chr3 (23-234)||(2977231-2977443)
chr3 (63-234)||(40508853-40509025)
chr3 (155-240)||(30598341-30598426)
chr3 (155-240)||(35903829-35903914)
chr3 (155-240)||(38191899-38191984)
chr3 (155-240)||(42282473-42282558)
chr3 (155-240)||(44267985-44268070)
chr3 (155-240)||(46310436-46310521)
chr3 (155-240)||(53187746-53187831)
chr3 (22-161)||(5125884-5126024)
chr3 (27-194)||(33852576-33852744)
chr3 (22-161)||(41623735-41623875)
chr3 (183-240)||(7884927-7884984)
chr3 (155-240)||(44795890-44795975)
chr3 (155-240)||(46609153-46609238)
chr3 (155-240)||(46611303-46611388)
chr3 (163-240)||(51686402-51686479)
chr3 (155-240)||(54412547-54412632)
chr3 (155-239)||(2661908-2661992)
chr3 (22-172)||(5133068-5133219)
chr3 (163-240)||(48829360-48829437)
chr3 (155-240)||(53092627-53092712)
chr3 (23-234)||(33113083-33113294)
chr3 (155-238)||(46114105-46114189)
chr3 (155-240)||(7883332-7883417)
chr3 (121-234)||(45898349-45898462)
chr3 (27-234)||(24382799-24383007)
chr3 (155-234)||(17516973-17517052)
chr3 (23-188)||(1845840-1846006)
chr3 (155-240)||(21350605-21350690)
chr3 (155-240)||(28626415-28626500)
chr3 (125-234)||(41021008-41021117)
chr3 (20-88)||(26449190-26449258)
chr3 (156-232)||(35572525-35572601)
chr3 (155-240)||(27897155-27897239)
chr3 (40-166)||(54092764-54092892)
chr3 (155-234)||(1847647-1847726)
chr3 (22-83)||(41944715-41944776)
chr3 (155-203)||(33051467-33051515)
chr3 (155-202)||(43767047-43767094)
chr3 (155-234)||(45897060-45897139)
chr3 (155-234)||(48635375-48635454)
chr3 (27-81)||(17238246-17238300)
chr3 (121-202)||(25535250-25535331)
chr3 (33-90)||(51454158-51454215)
chr3 (121-234)||(51454251-51454364)
chr3 (107-179)||(23876965-23877037)
[»] chr8 (79 HSPs)
chr8 (1-240)||(8609688-8609927)
chr8 (1-240)||(13108237-13108476)
chr8 (1-240)||(38547232-38547471)
chr8 (1-240)||(42941778-42942018)
chr8 (1-240)||(5036449-5036693)
chr8 (1-240)||(13485999-13486239)
chr8 (1-240)||(41042484-41042724)
chr8 (15-240)||(26242228-26242454)
chr8 (15-240)||(7745026-7745252)
chr8 (2-240)||(13282482-13282707)
chr8 (1-231)||(9673065-9673296)
chr8 (15-240)||(41825558-41825784)
chr8 (34-240)||(22272338-22272547)
chr8 (8-240)||(27691158-27691391)
chr8 (1-179)||(40339580-40339759)
chr8 (8-240)||(33708711-33708943)
chr8 (155-240)||(42943426-42943511)
chr8 (155-240)||(22273891-22273976)
chr8 (20-234)||(9184393-9184608)
chr8 (155-240)||(27692837-27692922)
chr8 (163-240)||(34681074-34681151)
chr8 (27-234)||(42897680-42897888)
chr8 (163-240)||(26238730-26238807)
chr8 (155-240)||(601704-601789)
chr8 (155-240)||(33762713-33762798)
chr8 (155-240)||(38548831-38548916)
chr8 (27-234)||(37525929-37526137)
chr8 (14-208)||(33750277-33750472)
chr8 (155-240)||(5038062-5038146)
chr8 (155-240)||(13106808-13106893)
chr8 (155-240)||(29237155-29237240)
chr8 (155-240)||(29239187-29239272)
chr8 (155-240)||(33707210-33707295)
chr8 (155-240)||(33761073-33761158)
chr8 (155-240)||(35509218-35509303)
chr8 (110-240)||(27406907-27407037)
chr8 (27-207)||(1320654-1320835)
chr8 (155-240)||(13283995-13284080)
chr8 (155-240)||(35510819-35510904)
chr8 (110-226)||(15305815-15305931)
chr8 (110-226)||(15486184-15486300)
chr8 (23-234)||(38882699-38882911)
chr8 (22-160)||(11788405-11788544)
chr8 (155-240)||(8608241-8608327)
chr8 (27-207)||(8654537-8654717)
chr8 (155-236)||(13484553-13484634)
chr8 (155-240)||(15308261-15308346)
chr8 (155-240)||(15488630-15488715)
chr8 (121-234)||(31821428-31821541)
chr8 (163-240)||(41823894-41823971)
chr8 (163-240)||(43262145-43262222)
chr8 (42-204)||(11722730-11722893)
chr8 (125-207)||(31201148-31201230)
chr8 (155-232)||(3151969-3152046)
chr8 (155-240)||(9671981-9672066)
chr8 (22-166)||(15145663-15145808)
chr8 (121-234)||(32822371-32822484)
chr8 (155-240)||(41040724-41040809)
chr8 (127-234)||(33160155-33160262)
chr8 (121-234)||(462371-462484)
chr8 (155-240)||(27404214-27404299)
chr8 (22-86)||(28433638-28433702)
chr8 (185-240)||(600764-600819)
chr8 (108-234)||(28433704-28433830)
chr8 (22-91)||(6164657-6164726)
chr8 (63-169)||(37801541-37801648)
chr8 (133-234)||(5075378-5075479)
chr8 (107-204)||(40020622-40020719)
chr8 (165-229)||(15562439-15562503)
chr8 (18-54)||(27406855-27406891)
chr8 (63-169)||(44526694-44526801)
chr8 (155-234)||(44620671-44620750)
chr8 (1-54)||(15305947-15306000)
chr8 (1-54)||(15486316-15486369)
chr8 (22-83)||(40020557-40020618)
chr8 (155-203)||(17807060-17807108)
chr8 (155-207)||(31199522-31199574)
chr8 (155-207)||(40019193-40019245)
chr8 (155-203)||(42894817-42894865)
[»] chr1 (68 HSPs)
chr1 (1-240)||(34778019-34778258)
chr1 (1-240)||(4855847-4856086)
chr1 (1-240)||(6818558-6818798)
chr1 (1-240)||(27087287-27087526)
chr1 (1-240)||(25278248-25278488)
chr1 (1-240)||(31238375-31238615)
chr1 (1-240)||(37344346-37344586)
chr1 (6-240)||(2869583-2869818)
chr1 (6-240)||(50555982-50556217)
chr1 (1-240)||(3013350-3013596)
chr1 (1-204)||(15104481-15104685)
chr1 (1-240)||(33602524-33602764)
chr1 (8-240)||(46583443-46583676)
chr1 (15-240)||(52643514-52643735)
chr1 (92-239)||(51896124-51896271)
chr1 (1-125)||(26225434-26225558)
chr1 (142-240)||(25278975-25279073)
chr1 (29-234)||(51121915-51122121)
chr1 (27-234)||(42134492-42134700)
chr1 (94-240)||(9121642-9121788)
chr1 (155-240)||(31236823-31236908)
chr1 (155-240)||(50554167-50554252)
chr1 (110-240)||(47013072-47013202)
chr1 (155-240)||(8169568-8169653)
chr1 (155-240)||(3011859-3011944)
chr1 (155-240)||(26223591-26223676)
chr1 (155-240)||(34776573-34776658)
chr1 (155-240)||(46582014-46582099)
chr1 (163-240)||(52641892-52641969)
chr1 (176-240)||(6816869-6816933)
chr1 (27-202)||(45380890-45381066)
chr1 (157-240)||(8167946-8168029)
chr1 (14-207)||(36895403-36895597)
chr1 (14-207)||(46638700-46638894)
chr1 (155-240)||(25276746-25276831)
chr1 (163-240)||(37088144-37088221)
chr1 (155-240)||(37345962-37346047)
chr1 (22-161)||(43868697-43868837)
chr1 (155-240)||(2871076-2871161)
chr1 (14-234)||(31801643-31801864)
chr1 (155-240)||(51894571-51894656)
chr1 (23-234)||(18183846-18184057)
chr1 (164-240)||(25278858-25278934)
chr1 (155-240)||(1444181-1444266)
chr1 (155-240)||(4854414-4854499)
chr1 (155-240)||(9120043-9120128)
chr1 (155-240)||(27089279-27089364)
chr1 (39-207)||(44157470-44157639)
chr1 (176-240)||(33599191-33599255)
chr1 (155-233)||(33599229-33599307)
chr1 (155-240)||(47011460-47011545)
chr1 (27-202)||(27940650-27940826)
chr1 (184-240)||(45044953-45045009)
chr1 (1-52)||(51896065-51896116)
chr1 (180-240)||(1442554-1442614)
chr1 (27-234)||(33685155-33685362)
chr1 (121-234)||(35479976-35480089)
chr1 (22-86)||(5783502-5783566)
chr1 (110-171)||(1442594-1442655)
chr1 (125-234)||(47269461-47269570)
chr1 (155-207)||(27952502-27952554)
chr1 (155-207)||(35478124-35478176)
chr1 (27-90)||(6575345-6575408)
chr1 (155-234)||(44159296-44159375)
chr1 (8-54)||(1442671-1442717)
chr1 (107-168)||(5783440-5783501)
chr1 (104-169)||(51544210-51544275)
chr1 (22-86)||(18064760-18064824)
[»] chr2 (71 HSPs)
chr2 (1-240)||(16763080-16763319)
chr2 (6-240)||(39664653-39664888)
chr2 (1-240)||(17696210-17696450)
chr2 (6-240)||(19908151-19908387)
chr2 (15-240)||(44709659-44709885)
chr2 (1-240)||(14388984-14389224)
chr2 (1-240)||(40560227-40560467)
chr2 (1-242)||(42519105-42519348)
chr2 (1-240)||(2766938-2767178)
chr2 (1-240)||(39455173-39455413)
chr2 (1-240)||(6797511-6797751)
chr2 (78-208)||(16377174-16377305)
chr2 (15-240)||(37645491-37645717)
chr2 (22-234)||(17946104-17946317)
chr2 (119-240)||(24208061-24208182)
chr2 (155-240)||(39663158-39663243)
chr2 (162-240)||(19906686-19906764)
chr2 (33-230)||(37417287-37417485)
chr2 (119-240)||(6786000-6786121)
chr2 (155-240)||(16376740-16376825)
chr2 (26-188)||(7744099-7744262)
chr2 (94-240)||(37020512-37020658)
chr2 (155-240)||(14387353-14387438)
chr2 (155-240)||(16764611-16764696)
chr2 (27-207)||(29909566-29909747)
chr2 (27-234)||(25619670-25619878)
chr2 (20-91)||(10716802-10716873)
chr2 (138-240)||(19581418-19581520)
chr2 (27-207)||(15372536-15372717)
chr2 (155-240)||(34400318-34400403)
chr2 (155-240)||(39456780-39456865)
chr2 (36-234)||(361455-361654)
chr2 (22-166)||(62720-62866)
chr2 (155-240)||(6783368-6783453)
chr2 (155-240)||(6799408-6799493)
chr2 (27-207)||(15432365-15432546)
chr2 (155-240)||(24205602-24205687)
chr2 (22-88)||(11315258-11315324)
chr2 (155-240)||(37022185-37022270)
chr2 (155-240)||(40561878-40561963)
chr2 (120-234)||(11315335-11315449)
chr2 (26-163)||(40097629-40097767)
chr2 (22-162)||(862213-862354)
chr2 (155-240)||(2577480-2577565)
chr2 (22-233)||(26584718-26584930)
chr2 (14-188)||(39290-39465)
chr2 (44-234)||(42879366-42879556)
chr2 (121-207)||(39593-39679)
chr2 (27-207)||(41706576-41706757)
chr2 (154-240)||(31475079-31475165)
chr2 (154-240)||(37646477-37646563)
chr2 (200-240)||(42517562-42517602)
chr2 (63-169)||(15807861-15807968)
chr2 (63-169)||(32608009-32608116)
chr2 (154-240)||(162074-162159)
chr2 (8-54)||(24207999-24208045)
chr2 (22-83)||(11022935-11022996)
chr2 (22-83)||(28246804-28246865)
chr2 (155-207)||(41144-41196)
chr2 (107-207)||(11023000-11023100)
chr2 (22-86)||(38148634-38148698)
chr2 (155-207)||(41708432-41708484)
chr2 (10-90)||(42001764-42001844)
chr2 (132-202)||(10716893-10716963)
chr2 (107-161)||(13999890-13999944)
chr2 (8-54)||(37020658-37020704)
chr2 (22-81)||(4416866-4416926)
chr2 (18-54)||(6785939-6785975)
chr2 (155-207)||(11021570-11021622)
chr2 (107-207)||(28246700-28246800)
chr2 (155-207)||(28248177-28248229)
[»] chr7 (86 HSPs)
chr7 (6-240)||(39859114-39859349)
chr7 (6-240)||(6602339-6602574)
chr7 (1-240)||(24228289-24228529)
chr7 (8-240)||(34776802-34777035)
chr7 (1-240)||(30940305-30940545)
chr7 (6-240)||(45359340-45359575)
chr7 (1-240)||(47386089-47386329)
chr7 (6-222)||(13168142-13168362)
chr7 (1-240)||(38474023-38474263)
chr7 (1-202)||(35693250-35693454)
chr7 (1-240)||(37115420-37115646)
chr7 (8-240)||(27665952-27666185)
chr7 (43-240)||(37796103-37796301)
chr7 (18-240)||(29996411-29996634)
chr7 (8-240)||(56334-56566)
chr7 (10-188)||(48852236-48852415)
chr7 (1-166)||(23906141-23906307)
chr7 (1-134)||(46439410-46439544)
chr7 (94-240)||(20478046-20478192)
chr7 (155-240)||(13169683-13169768)
chr7 (14-234)||(33038690-33038911)
chr7 (155-240)||(39857649-39857734)
chr7 (14-234)||(46996595-46996816)
chr7 (22-188)||(1546343-1546510)
chr7 (155-240)||(23904587-23904672)
chr7 (155-240)||(35403619-35403704)
chr7 (23-234)||(27955380-27955592)
chr7 (155-240)||(37113945-37114030)
chr7 (24-207)||(2167516-2167700)
chr7 (107-240)||(13018037-13018172)
chr7 (24-234)||(23953815-23954026)
chr7 (155-240)||(78014-78099)
chr7 (155-240)||(6605397-6605482)
chr7 (155-240)||(22155847-22155932)
chr7 (155-240)||(22211762-22211847)
chr7 (155-240)||(24226585-24226670)
chr7 (155-240)||(27664434-27664519)
chr7 (155-240)||(48227941-48228026)
chr7 (22-166)||(6056844-6056989)
chr7 (155-240)||(34775002-34775087)
chr7 (155-240)||(35401973-35402058)
chr7 (155-240)||(47384298-47384383)
chr7 (27-234)||(47341588-47341800)
chr7 (155-241)||(35691430-35691516)
chr7 (155-240)||(20479719-20479804)
chr7 (155-240)||(46437111-46437196)
chr7 (154-235)||(13039641-13039722)
chr7 (183-240)||(23906295-23906352)
chr7 (22-166)||(31913547-31913692)
chr7 (167-240)||(38549551-38549624)
chr7 (34-234)||(46812495-46812696)
chr7 (39-202)||(11682823-11682987)
chr7 (184-240)||(29994910-29994966)
chr7 (27-204)||(8423187-8423365)
chr7 (22-171)||(23962377-23962527)
chr7 (27-204)||(35344196-35344374)
chr7 (154-240)||(37791658-37791744)
chr7 (158-240)||(45361279-45361361)
chr7 (22-88)||(48704337-48704403)
chr7 (22-86)||(34691133-34691197)
chr7 (27-234)||(40784356-40784564)
chr7 (22-179)||(366763-366921)
chr7 (22-179)||(7401958-7402116)
chr7 (107-207)||(45463707-45463807)
chr7 (137-234)||(38613498-38613595)
chr7 (22-90)||(13034828-13034896)
chr7 (22-86)||(45463808-45463872)
chr7 (161-240)||(46439539-46439618)
chr7 (22-81)||(46867836-46867895)
chr7 (24-90)||(38613618-38613684)
chr7 (155-207)||(8421453-8421505)
chr7 (23-78)||(2492493-2492548)
chr7 (155-234)||(46810715-46810794)
chr7 (8-54)||(20478192-20478238)
chr7 (118-208)||(34691031-34691121)
chr7 (124-202)||(38614916-38614993)
chr7 (155-225)||(48311733-48311803)
chr7 (22-83)||(4322494-4322555)
chr7 (107-208)||(4322559-4322660)
chr7 (22-83)||(48303571-48303632)
chr7 (155-207)||(4321075-4321127)
chr7 (22-90)||(17199071-17199139)
chr7 (121-169)||(19712264-19712312)
chr7 (155-207)||(30108602-30108654)
chr7 (122-166)||(31915040-31915084)
chr7 (155-207)||(35342462-35342514)
[»] chr4 (73 HSPs)
chr4 (1-240)||(51011930-51012169)
chr4 (1-240)||(41761626-41761866)
chr4 (1-240)||(49523128-49523368)
chr4 (15-240)||(48813791-48814017)
chr4 (1-240)||(41781543-41781783)
chr4 (8-240)||(35404332-35404565)
chr4 (15-225)||(48646641-48646852)
chr4 (1-205)||(42980674-42980879)
chr4 (8-240)||(43519428-43519661)
chr4 (15-240)||(2693147-2693372)
chr4 (15-240)||(11601675-11601900)
chr4 (63-225)||(52868091-52868254)
chr4 (27-207)||(35996100-35996281)
chr4 (155-240)||(49524733-49524818)
chr4 (1-107)||(11255820-11255927)
chr4 (155-240)||(35401753-35401838)
chr4 (155-234)||(39345574-39345653)
chr4 (155-240)||(4173740-4173825)
chr4 (155-240)||(43507171-43507256)
chr4 (155-240)||(43508653-43508738)
chr4 (155-240)||(20493831-20493916)
chr4 (155-240)||(33264386-33264471)
chr4 (155-240)||(51013886-51013971)
chr4 (27-207)||(2350410-2350594)
chr4 (155-240)||(319277-319362)
chr4 (27-207)||(47941848-47942029)
chr4 (163-240)||(48645259-48645336)
chr4 (22-232)||(7149551-7149763)
chr4 (27-207)||(44794666-44794847)
chr4 (35-234)||(44558407-44558607)
chr4 (155-242)||(11254121-11254208)
chr4 (158-240)||(320903-320985)
chr4 (154-240)||(2691378-2691463)
chr4 (27-196)||(2827452-2827622)
chr4 (154-240)||(20819989-20820075)
chr4 (155-240)||(4169690-4169775)
chr4 (26-166)||(26296799-26296940)
chr4 (155-240)||(33266010-33266095)
chr4 (15-166)||(50131240-50131392)
chr4 (24-234)||(4519386-4519597)
chr4 (155-240)||(833227-833312)
chr4 (155-240)||(5439647-5439732)
chr4 (125-234)||(10372711-10372820)
chr4 (22-166)||(27382195-27382340)
chr4 (20-88)||(25993653-25993721)
chr4 (27-234)||(51041837-51042044)
chr4 (155-240)||(5437815-5437900)
chr4 (125-234)||(10762591-10762700)
chr4 (107-207)||(39083676-39083776)
chr4 (125-240)||(835012-835127)
chr4 (110-209)||(13450970-13451069)
chr4 (155-225)||(42982452-42982522)
chr4 (1-50)||(52868048-52868097)
chr4 (163-232)||(54387890-54387958)
chr4 (107-207)||(5484577-5484677)
chr4 (22-86)||(39083777-39083841)
chr4 (22-86)||(39189520-39189584)
chr4 (107-207)||(39921531-39921631)
chr4 (155-239)||(43521109-43521193)
chr4 (107-207)||(43779854-43779954)
chr4 (107-166)||(44972489-44972548)
chr4 (27-188)||(27624862-27625024)
chr4 (22-83)||(5484681-5484742)
chr4 (22-83)||(32652240-32652301)
chr4 (110-207)||(39189419-39189516)
chr4 (22-87)||(41356094-41356159)
chr4 (22-83)||(42880683-42880744)
chr4 (22-83)||(43779789-43779850)
chr4 (107-207)||(32652136-32652236)
chr4 (155-207)||(44792971-44793023)
chr4 (107-207)||(44994274-44994374)
chr4 (155-234)||(39923009-39923088)
chr4 (22-83)||(39921635-39921696)
[»] scaffold1454 (1 HSPs)
scaffold1454 (1-240)||(1267-1506)
[»] chr6 (48 HSPs)
chr6 (1-240)||(11355226-11355466)
chr6 (1-240)||(32438964-32439211)
chr6 (1-240)||(32516881-32517121)
chr6 (1-240)||(20523370-20523610)
chr6 (15-240)||(10568403-10568629)
chr6 (15-240)||(6899489-6899715)
chr6 (1-240)||(13613462-13613702)
chr6 (1-191)||(9398713-9398904)
chr6 (15-166)||(7049835-7049987)
chr6 (15-229)||(14338369-14338584)
chr6 (33-240)||(7372881-7373078)
chr6 (100-226)||(3456766-3456892)
chr6 (163-240)||(10569927-10570004)
chr6 (110-240)||(32455881-32456011)
chr6 (155-240)||(11357194-11357279)
chr6 (155-240)||(32518497-32518582)
chr6 (20-209)||(30891159-30891349)
chr6 (44-203)||(2968180-2968340)
chr6 (155-240)||(7371179-7371264)
chr6 (155-240)||(9400035-9400120)
chr6 (155-240)||(20525334-20525419)
chr6 (27-234)||(29077338-29077546)
chr6 (25-207)||(3018336-3018519)
chr6 (155-240)||(3480657-3480742)
chr6 (163-240)||(6902906-6902982)
chr6 (179-240)||(8605349-8605410)
chr6 (155-240)||(18645104-18645188)
chr6 (155-240)||(32454252-32454337)
chr6 (20-88)||(24662615-24662683)
chr6 (27-207)||(4641392-4641573)
chr6 (163-240)||(13610694-13610771)
chr6 (26-165)||(25172014-25172154)
chr6 (176-240)||(32437144-32437208)
chr6 (165-240)||(7051255-7051330)
chr6 (166-241)||(33276804-33276879)
chr6 (183-240)||(7049790-7049847)
chr6 (163-240)||(21068629-21068706)
chr6 (125-207)||(29112337-29112419)
chr6 (107-207)||(17952029-17952129)
chr6 (63-169)||(11163875-11163982)
chr6 (22-83)||(17951964-17952025)
chr6 (22-83)||(35175785-35175846)
chr6 (118-234)||(35175861-35175977)
chr6 (197-240)||(21091110-21091153)
chr6 (8-54)||(3456898-3456944)
chr6 (36-90)||(31209016-31209070)
chr6 (21-54)||(32455832-32455865)
chr6 (155-207)||(17950598-17950650)
[»] scaffold0564 (1 HSPs)
scaffold0564 (1-240)||(8266-8504)
[»] scaffold0058 (3 HSPs)
scaffold0058 (8-240)||(3298-3531)
scaffold0058 (8-240)||(4470-4703)
scaffold0058 (155-240)||(14343-14428)
[»] scaffold0024 (1 HSPs)
scaffold0024 (8-166)||(37282-37441)
[»] scaffold0345 (1 HSPs)
scaffold0345 (155-240)||(1555-1640)
[»] scaffold0477 (1 HSPs)
scaffold0477 (27-207)||(6540-6721)
[»] scaffold0129 (1 HSPs)
scaffold0129 (22-166)||(4537-4682)
[»] scaffold0081 (1 HSPs)
scaffold0081 (155-240)||(54258-54343)
[»] scaffold1712 (1 HSPs)
scaffold1712 (155-240)||(986-1071)
[»] scaffold0002 (1 HSPs)
scaffold0002 (168-237)||(436272-436341)
[»] scaffold0204 (1 HSPs)
scaffold0204 (22-166)||(30372-30517)
[»] scaffold0092 (1 HSPs)
scaffold0092 (63-169)||(36792-36899)
[»] scaffold0004 (1 HSPs)
scaffold0004 (165-240)||(106674-106747)
[»] scaffold0146 (1 HSPs)
scaffold0146 (27-81)||(15899-15953)
[»] scaffold0001 (1 HSPs)
scaffold0001 (192-229)||(63753-63790)
[»] scaffold0722 (1 HSPs)
scaffold0722 (22-90)||(4750-4818)


Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 17574561 - 17574322
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  17574561 ttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagggacacgt 17574462  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17574461 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 17574362  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17574361 tggccgattttttaaaattcaaggacgaatttgaggtatt 17574322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 7268086 - 7267847
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    |||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  7268086 ttaagtttcgaatttttacaatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacatcatgcgagggacacgt 7267987  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  7267986 catcaccactaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaatt 7267887  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  7267886 tggacgattttttaaaattcaaggacgaatttgaggtatt 7267847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 34327879 - 34327639
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||     
T  34327879 ttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacgcaacatgcaagaggacaca 34327780  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  34327779 tcatcaccactaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacgaat 34327680  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||  |||||||||||||||||||||||||||    
T  34327679 ttggccaattttagaaaattcaaggacgaatttgaggtatt 34327639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 30468160 - 30468399
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||| ||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  30468160 ttaaatctcaaatttttaccatttccatcaaattagtccttgtacacgtggttgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacg 30468259  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || |||||||    
T  30468260 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacgaat 30468359  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtat 239  Q
    ||| || ||||||||||||||||||||||| |||||||||    
T  30468360 ttgaccaattttttaaaattcaaggacgaaattgaggtat 30468399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 2180017 - 2179791
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||     
T  2180017 tttaccattttcatcaaattagtccttgtacatgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacatgtcatcaccactaat 2179918  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||  ||||||||||||||||||||| ||||||||||    
T  2179917 ggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaatttgaccgatttttt 2179818  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||| |||||||||||||    
T  2179817 aaaattcaaggacaaatttgaggtatt 2179791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 36057526 - 36057733
Alignment:
Q  34 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggaggg 132  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||    
T  36057526 tagtccttgtacatgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagatgacacatcatcaccattaacggagcttttggacggaggg 36057625  T
Q  133 accattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaattt 232  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36057626 accattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaattt 36057725  T
Q  233 gaggtatt 240  Q
    ||||||||    
T  36057726 gaggtatt 36057733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 8539919 - 8539679
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||     
T  8539919 ttaaatctcgaatttttaccatttccatcaatttagtccttgcacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacaca 8539820  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
     ||||| ||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| | ||||||    
T  8539819 ccatcaacactaacggagcttttggatggagcgactattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcaagaacgaat 8539720  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||   ||||||| |||||||||||||||||||||||||||    
T  8539719 ttgattgatttttcaaaattcaaggacgaatttgaggtatt 8539679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 18624888 - 18625128
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||     
T  18624888 ttaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggttgccttgttgacacgtgtataagacaacacaacatgcaagaagacaca 18624987  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  18624988 tcatcactactaacggagcttttggacggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacgaat 18625087  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    || || |||   | |||||||||||||||||||||||||||    
T  18625088 ttagctgatcagtgaaaattcaaggacgaatttgaggtatt 18625128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 2854215 - 2854446
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| || ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| | ||||||| | | ||| |||||||    
T  2854215 tcgaattttgaccatttccatcaatttagtccttgtacacgtggctgacttgctgacacgtgtacaagacaaca-agcatgcaagaagccacatcatcac 2854313  T
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
     | ||| ||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||| ||| | |||||||||||||||| ||| |||    
T  2854314 tattaatggaccttttggacggagggacgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaattcagggacgaaattgaccg 2854412  T
Q  207 attttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||||||||||||||||||||||||    
T  2854413 atttttcaaaattcaaggacgaatttgaggtatt 2854446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 24541098 - 24541332
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| || ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||| ||||||| | ||||||| | | ||| |||||||    
T  24541098 tcgaattttgaccatttccatcaatttagtccttgtacatgtggctgacttgctgacacgtgtacaggacaacaaagcatgcaagaagccacatcatcac 24541197  T
Q  107 cactaacggagcttttggacggagg-gaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggcc 205  Q
     | |||  || |||||||||||||| ||  | |||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||| ||||||    
T  24541198 tattaatagaccttttggacggaggagatgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 24541297  T
Q  206 gattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| ||||||||| |||||||||||||||||    
T  24541298 gatttttcaaaattcaatgacgaatttgaggtatt 24541332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 28819526 - 28819391
Alignment:
Q  6 tctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatc 104  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| |||| |||| |||| || ||||||| |||||    
T  28819526 tctcgaatttttaccattttcatcaatttagtccttgtgcacgtggttgccttgttgacacgtgtacatgacatcacatcatgtaagaggacacatcatc 28819427  T
Q  105 accactaacggagcttttggacggagggaccatttt 140  Q
    | ||||||||||||||||||||||||||||||||||    
T  28819426 atcactaacggagcttttggacggagggaccatttt 28819391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 12738736 - 12738821
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12738736 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 12738821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 12801559 - 12801644
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12801559 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 12801644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 30463989 - 30463904
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatt 30463904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 240
Target Start/End: Original strand, 29621755 - 29621901
Alignment:
Q  94 gacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcaggg 193  Q
    ||||| ||||||| | |||||||  ||||||||||||||||   ||||||||||||||| |||||||||||||||| | ||||||| | |||||||||||    
T  29621755 gacacatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggg 29621854  T
Q  194 acgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||| ||||||||||||| ||||||||| ||| | |||||||||||    
T  29621855 acgaaattggccgatttttcaaaattcaatgactattttgaggtatt 29621901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 8541271 - 8541356
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8541271 aaattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatgacgaatttgaggtatt 8541356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 18728495 - 18728716
Alignment:
Q  14 atttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaa 112  Q
    |||| ||| ||| ||||| ||||||| |  |||||||||| |||| ||| |||||||||||||||||||| ||||||| | ||||  ||| ||   ||||    
T  18728495 attttccaattcaatcaaattagtcccttaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcaaggtgacagatcagcaaggctaa 18728594  T
Q  113 cggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttt 212  Q
    | ||||  ||||||||||||||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| ||||||||| ||||||||    |    
T  18728595 cagagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaagggacgaagttggccgacaagt 18728694  T
Q  213 taaaattcaaggacgaatttga 234  Q
     |||||||| ||||||||||||    
T  18728695 gaaaattcagggacgaatttga 18728716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 110 - 240
Target Start/End: Complemental strand, 40780684 - 40780554
Alignment:
Q  110 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatt 209  Q
    |||||||  ||||||||||||||||   |||||||||||| || |||||||||||||||| | ||||||| | |||||||||||||||| ||| ||||||    
T  40780684 taacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatt 40780585  T
Q  210 ttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| ||||||||||||| | |||||||||||    
T  40780584 tttcaaaattcaaggactattttgaggtatt 40780554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 110 - 240
Target Start/End: Original strand, 42473597 - 42473727
Alignment:
Q  110 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatt 209  Q
    |||||||  ||||||||||| ||||   |||||||||||||||||||||||||||||||  | ||||||| | | |||||||||||||| ||||||||||    
T  42473597 taacggacattttggacggaaggactgatttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatt 42473696  T
Q  210 ttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| ||||||||||||| | |||||||||||    
T  42473697 tttcaaaattcaaggactattttgaggtatt 42473727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 2852975 - 2852890
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||| ||||| | ||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  2852975 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtatt 2852890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 7269446 - 7269531
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||    
T  7269446 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtatt 7269531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 34328827 - 34328912
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| |||| |||||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  34328827 aaattcaaggacaaaatagctattttgcaaaattcatggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtatt 34328912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 28813765 - 28813852
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga--ttttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||| |  |||||| ||||||||||||||||||||||||||    
T  28813765 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccaatttttttttaaattcaaggacgaatttgaggtatt 28813852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 32087745 - 32087560
Alignment:
Q  14 atttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaa 112  Q
    |||| ||| ||| ||||| ||||||| || |||||||||| |||| ||| |||| ||||||||||||||| ||||||| | || |  ||| ||   ||||    
T  32087745 attttccaattcaatcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgatagatcagcaaggctaa 32087646  T
Q  113 cggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaa 198  Q
    | ||||  ||||||||||||||| |||||||||||||||| |||||| ||||||||| | ||||||| ||| |||| |||||||||    
T  32087645 cagagcacttggacggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataattaagggacgaa 32087560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 234
Target Start/End: Original strand, 43317965 - 43318174
Alignment:
Q  26 catcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgg 124  Q
    |||||| |||||||||| |||||||||| |||| ||| ||| ||||||||||| ||||||||||   | ||||  ||  ||   ||||| ||||  ||||    
T  43317965 catcaaattagtccttgaacacgtggcttcctttttgccacatgtacaagacagcacaacatgctgggcgacatatcggcatggctaacagagcacttgg 43318064  T
Q  125 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagg 224  Q
    ||||||||||| |||| |||||||||||  ||||||||||||||| | ||||||| ||| |||| ||||| || |||||||||    | |||||||||||    
T  43318065 acggagggaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccataaaaattcaagg 43318164  T
Q  225 acgaatttga 234  Q
    ||||||||||    
T  43318165 acgaatttga 43318174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 12737377 - 12737305
Alignment:
Q  6 tctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagaca 78  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  12737377 tctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgaca 12737305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 17577935 - 17578020
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| | ||||| | |||||||||||||||||||||| ||| | ||||||||||| |||||||||||||||||||||||||||    
T  17577935 aaattcatgaactaatttgatattttgcaaaattcagggaagaaatgggccgatttttcaaaattcaaggacgaatttgaggtatt 17578020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 21842992 - 21843077
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||| |||| || ||| ||||||||| |||||||||||||||||||||||||||    
T  21842992 aaattcagggactaatttgatatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 21843077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 28822090 - 28822175
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| |||| ||||||  |||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||    
T  28822090 aaattcaaggacaaaatagcaatttcgcaaaattcagggacgaatttgacctatttttaaaaattcaaggacgaatttgaggtatt 28822175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 32134320 - 32134235
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||  ||||||| ||||||||| ||| |||||||||||||    
T  32134320 aaattcagggactaaatagatattttacaaaattcaaagacgaatttggttgatttttgaaaattcaatgacaaatttgaggtatt 32134235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 35395549 - 35395343
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| ||||||| || ||| |||||| |||| ||| |||| ||||||||||||||  ||||||| | ||||  ||| ||   ||||| ||||  |||||    
T  35395549 atcaaattagtccctgaacatgtggcttccttcttgccacgcgtacaagacaacac--catgcaaggcgacatatcagcatggctaacagagcacttgga 35395452  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    |||||||||| |||||||||||||||   ||||||||| ||||||| ||||||| ||| |||| ||||||||| ||||||||  | | |||||||| |||    
T  35395451 cggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 35395352  T
Q  226 cgaatttga 234  Q
     ||||||||    
T  35395351 tgaatttga 35395343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 40782211 - 40782296
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||||||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  40782211 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatt 40782296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 43492131 - 43492212
Alignment:
Q  153 taaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||| ||||| ||||||| |||||| ||| ||||||||||    
T  43492131 taaaattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaatttga 43492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 12800200 - 12800128
Alignment:
Q  6 tctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagaca 78  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  12800200 tctcgaatttttaccattgccatcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgaca 12800128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21841235 - 21841179
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgcct 57  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21841235 ttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgcct 21841179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 38177999 - 38178207
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| ||||||| || |||| |||  ||||||||||||||||||| ||||||  | ||||  ||| ||   ||||||||||   ||||    
T  38177999 atcaagttagtccttgaacacgtgacttcctttttgctacgtgtacaagacaacacagcatgcaggacgacatatcagcatggctaacggagcacatgga 38178098  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    || ||||||| ||||||||||||||||  ||||||||  ||||||| ||||||| ||| |||| ||||| ||||||| ||||    | |||||| |||||    
T  38178099 cgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccgacccgtgaaaatttaagga 38178198  T
Q  226 cgaatttga 234  Q
    |||||||||    
T  38178199 cgaatttga 38178207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 38205223 - 38205431
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| ||||||| || |||| |||  ||||||||||||||||||| ||||||  | ||||  ||| ||   ||||||||||   ||||    
T  38205223 atcaagttagtccttgaacacgtgacttcctttttgctacgtgtacaagacaacacagcatgcaggacgacatatcagcatggctaacggagcacatgga 38205322  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    || ||||||| ||||||||||||||||  ||||||||  ||||||| ||||||| ||| |||| ||||| ||||||| ||||    | |||||| |||||    
T  38205323 cgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccgacccgtgaaaatttaagga 38205422  T
Q  226 cgaatttga 234  Q
    |||||||||    
T  38205423 cgaatttga 38205431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 29620227 - 29620142
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||| |||||| | ||||||| | |||||||||||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  29620227 aaattcagagactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatt 29620142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 15459184 - 15459303
Alignment:
Q  115 gagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttta 214  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||||||| || ||||||  |||| |  |||||  ||||||| |||| |||||  ||      
T  15459184 gagcatttggacgaagggaccattttgatggacgtctgttaaattcaggaacaaaatagccatttcgataaattgggggacgattttgtccgatccttgc 15459283  T
Q  215 aaattcaaggacgaatttga 234  Q
    ||||||||||||||||||||    
T  15459284 aaattcaaggacgaatttga 15459303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 41493931 - 41493848
Alignment:
Q  157 attcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||| |||||||||||||||||  |||||||   ||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  41493931 attcatggactaaatagatatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttgaggtatt 41493848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 38596980 - 38596878
Alignment:
Q  132 gaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatt 231  Q
    |||| |||||||||||||||   ||||||||||||||| | ||||||| ||| |||| ||||||||||||||||||    | ||||||||||||||||||    
T  38596980 gacctttttgatggacgtctaacaaattcagggactaagttgatatttcgcataattgagggacgaatttggccgacccataaaaattcaaggacgaatt 38596881  T
Q  232 tga 234  Q
    |||    
T  38596880 tga 38596878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 234
Target Start/End: Original strand, 35292287 - 35292495
Alignment:
Q  26 catcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgg 124  Q
    |||||| |||||||||| |||||| ||| |||| ||| ||||||||||||||| |||||||||    | ||||  |||  |   |||||||||| |||||    
T  35292287 catcaaattagtccttgaacacgtagcttcctttttgccacgtgtacaagacagcacaacatgttgggcgacagatcagaatagctaacggagcatttgg 35292386  T
Q  125 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagg 224  Q
    ||||||| ||| |||| |||||||||||  ||||||||||||||| | ||||||| ||| |||| | ||| || ||||||| |    | |||||||||||    
T  35292387 acggaggaaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgaaggatgattttggcc-acccataaaaattcaagg 35292485  T
Q  225 acgaatttga 234  Q
    ||||||||||    
T  35292486 acgaatttga 35292495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 169
Target Start/End: Complemental strand, 38597157 - 38597020
Alignment:
Q  33 ttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttggacggagg 131  Q
    |||||||||| ||||| |||| |||| ||| |||||||||||||||||||| ||||||  | ||||  ||| |||  |||||||| |  |||||| ||||    
T  38597157 ttagtccttgaacacgcggcttccttcttgccacgtgtacaagacaacacagcatgcagggcgacagatcagcacggctaacggaacacttggacagagg 38597058  T
Q  132 gaccattttgatggacgtctgtaaaattcagggactaa 169  Q
    |||| ||||||||||||||||  ||||| |||||||||    
T  38597057 gacctttttgatggacgtctgacaaattaagggactaa 38597020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 33256618 - 33256410
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| ||||||| || |||||||||| |||| ||| |||  ||||||||||||||| ||||||| | ||||  ||| ||   |||||||||   |||||    
T  33256618 atcaaattagtccctgaacacgtggcttccttcttgccactcgtacaagacaacacagcatgcaaggtgacagatcagcaaggctaacggaggacttgga 33256519  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    |||||||||  ||||||||||||||||  |||||||  || ||| | ||||||| ||| |||| | ||| ||| ||||||||  | | |||||||| |||    
T  33256518 cggagggacttttttgatggacgtctgacaaattcaaagattaagttgatatttcgcataattgaaggatgaagttggccgacgtgtaaaaattcaggga 33256419  T
Q  226 cgaatttga 234  Q
    |||||||||    
T  33256418 cgaatttga 33256410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 209
Target Start/End: Complemental strand, 24496952 - 24496778
Alignment:
Q  36 gtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagggac 134  Q
    |||||||||||| || || |||||||||||||||||| |||||||| | ||||||  | ||||  ||| ||  | |||| || | |||||||||| ||||    
T  24496952 gtccttgtacacatgacttccttgttgacacgtgtacgagacaacatagcatgcaggacgacagatcagcaatagtaacagaacatttggacggatggac 24496853  T
Q  135 cattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatt 209  Q
    |||||||||| ||||||   ||||||||||| ||| | |||||||  || |||| |||||| |||||| ||||||    
T  24496852 cattttgatgaacgtctcacaaattcagggattaatttgatatttcacataattgagggacaaatttgaccgatt 24496778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32135729 - 32135786
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgcctt 58  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  32135729 ttaaatctcgaatttttactatttccatcaatttagtccttgtacacgtggatgcctt 32135786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 27076043 - 27075831
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagctt 120  Q
    |||||||||| || |||||| |||||||||||| ||   ||||||||| |||  | | |||| ||||||  | ||||||||| |  ||||||||| |       
T  27076043 tttccatcaaattggtccttatacacgtggctgactaaatgacacgtggacatcaaagcacatcatgcaggatgacacgtcaacctcactaacgggggga 27075944  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattc 220  Q
    ||| |||||||||  | |||||||||||||||| ||||||||| ||||| | ||||||||| ||||||  || || |||||||||| |  ||  ||||||    
T  27075943 ttgaacggagggatgaatttgatggacgtctgttaaattcaggaactaatttgatattttgaaaaattgtggtacaaatttggccggtccttgcaaattc 27075844  T
Q  221 aaggacgaatttg 233  Q
    ||||| |||||||    
T  27075843 aaggatgaatttg 27075831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 42471607 - 42471552
Alignment:
Q  185 aattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  42471607 aattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatt 42471552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 19997341 - 19997159
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagctt 120  Q
    |||||||||| ||| || ||||||||||||||| || | ||||||||  |||  ||| |||||||||||  | ||||||||| |  |||||||| ||       
T  19997341 tttccatcaaattattcattgtacacgtggctgactggatgacacgttgacatcacagcacaacatgcaggacgacacgtcagcctcactaacgaaggga 19997242  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttgg 203  Q
    ||||||||| |||  | ||||||| | |||||| ||||||||| | ||| | ||||||||| ||||||  |||||||||||||    
T  19997241 ttggacggaaggatgaatttgatgaatgtctgttaaattcaggaagtaatttgatattttgaaaaatttggggacgaatttgg 19997159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 27349369 - 27349331
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgt 60  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  27349369 tttccatcaatttagtccttgtacacgtggcttccttgt 27349331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 27349281 - 27349212
Alignment:
Q  119 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 188  Q
    ||||||||||||||||||||||||| |||||  |  ||||||| |||| |||| ||||||| ||||||||    
T  27349281 ttttggacggagggaccattttgatagacgtgagagaaattcaaggacaaaatcgatatttcgcaaaatt 27349212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 42473545 - 42473581
Alignment:
Q  18 accatttccatcaatttagtccttgtacacgtggctg 54  Q
    ||||||||||||| |||||||||||||||||||||||    
T  42473545 accatttccatcagtttagtccttgtacacgtggctg 42473581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 29621709 - 29621755
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctg 54  Q
    |||||| || || |||||||||| |||||||||||||||||||||||    
T  29621709 tcgaattttgacaatttccatcagtttagtccttgtacacgtggctg 29621755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 38176721 - 38176671
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggcc 205  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||||||||||    
T  38176721 aaattcagggattaaattgatatttcgcataattaagggacgaatttggcc 38176671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 38203945 - 38203895
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggcc 205  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||||||||||    
T  38203945 aaattcagggattaaattgatatttcgcataattaagggacgaatttggcc 38203895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 42620685 - 42620746
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||||||||||||||||| | |||||||||||  ||| ||  |||||||||||| |||||||    
T  42620685 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 42620746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 32089927 - 32089979
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||| ||||||||    
T  32089927 aaattcagggattaaattgatatttcgcataattgagggacgaagttggccga 32089979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 32835965 - 32835913
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||||||| ||||    
T  32835965 aaattcagggattaaattgatatttcgcataattaagggacgaatttgaccga 32835913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 33257762 - 33257814
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||| ||||||||    
T  33257762 aaattcagggattaaattgatatttcgcataattaagggacgaagttggccga 33257814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 40330517 - 40330569
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| |||||||| |||||||||    
T  40330517 aaattcagggattaaattgatatttcgcataattgagggacgattttggccga 40330569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 53190660 - 53190899
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  53190660 ttaagtctcaaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaagggacacgt 53190759  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53190760 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 53190859  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  53190860 tggccgattttttaaaattcaaggacgaatttgaggtatt 53190899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 54898680 - 54898441
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  54898680 ttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacgcaacatgcaagggacacgt 54898581  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    ||||  |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  54898580 catcgtcactaacggagcttttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 54898481  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    || |||||||||||||||||||||||||||||||||||||    
T  54898480 tgaccgattttttaaaattcaaggacgaatttgaggtatt 54898441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 6 - 240
Target Start/End: Original strand, 27898986 - 27899221
Alignment:
Q  6 tctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatc 104  Q
    |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  27898986 tctcgaatttttaccatttccatcaaattagtccttgtacacatggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacgtcatc 27899085  T
Q  105 accactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggc 204  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  27899086 accactaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggc 27899185  T
Q  205 cgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||||||||||||    
T  27899186 cgattttttaaaattcaaggacgaatttgaggtatt 27899221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 2226053 - 2226292
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  2226053 ttaagtctcgaatttgtactatttccatcaatttagtccttgtacacgtggctaccttgttgacacgtgtacaagacaacacagcatgcaagggacacgt 2226152  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2226153 catcaccactaacagagtttttggacggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 2226252  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2226253 tggccgattttttaaaattcaaggacgaatttgaggtatt 2226292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 41977993 - 41977754
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41977993 ttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtgactgccttgttgacacgtgtacaagacaacacaacatgcaagggacacgt 41977894  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    |||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||| || ||||||||||||| |||    
T  41977893 catcaccattaacgaagcttttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtatt 41977794  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41977793 tggccgattttttaaaattcaaggacgaatttgaggtatt 41977754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 35905613 - 35905843
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  35905613 ttaagtctcgaatttttacaatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacccatcatgcaagggacacgt 35905712  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35905713 catcaccactaccggagcttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 35905812  T
Q  201 tggccgattttttaaaattcaaggacgaatt 231  Q
    || |||||||||||||||||||||| |||||    
T  35905813 tgaccgattttttaaaattcaaggatgaatt 35905843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 21348967 - 21348727
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| |||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||     
T  21348967 ttaaatctcgaatttttaccattttcatcaatttagtctttgtacacgtggccgccttattgacacgtgtacatgacaacacaacatgcaagaggacaca 21348868  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  21348867 ttatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaat 21348768  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  21348767 ttggccgattttttaaaattcaaggacaaatttgaggtatt 21348727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 51684840 - 51684614
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||||||||||    
T  51684840 tttaccatttccatcaaattagtccttgtacacgtgtctgccttgttgacacgtgtacaggacaacacaacacgcaagaggacacatcatcaccactaac 51684741  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||     
T  51684740 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatgaatttggctgatttttg 51684641  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||| ||||    
T  51684640 aaaattcaaggacgaatttgagatatt 51684614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 30599818 - 30600058
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| |||||||     
T  30599818 ttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttattgacatgtgtacaagacaacacagcatgcaagaggacaca 30599917  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||    
T  30599918 tcatcaccactaacagagcttttggacggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggacaaat 30600017  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||| | |||||| ||||||||||||||||||||    
T  30600018 ttggccgatttgtaaaaatttaaggacgaatttgaggtatt 30600058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 46112731 - 46112491
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| ||| |||| |||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  46112731 ttaaatcttgaatttttaccatttccatcaatttagtctttgtacacgtgactgacttgttgacacgtgtacatgacaacacaacatgcaagaggacacg 46112632  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||    
T  46112631 tcatcaccactaacatagcttttgaacggagggaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaataacgaat 46112532  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46112531 ttggccgattttttaaaattcaaggacgaatttgaggtatt 46112491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 23293070 - 23293310
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||     
T  23293070 ttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacaca 23293169  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| || |||||    
T  23293170 tcatcaccactaacggagcttttggacggagggactattttgatggacgtttgtaaaattcatggactaaatagatatttcgcaaaattcaagggcgaat 23293269  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||| |||||||  ||||||||| || |||||||||||||    
T  23293270 ttggctgatttttcgaaattcaagaacaaatttgaggtatt 23293310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 43765381 - 43765141
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||     
T  43765381 ttaaatctcgattttttaccatttccatcaatttagtcattgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgtaagaggacaca 43765282  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||| || ||||||    
T  43765281 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagaaactaaatagatatttcgcaaaattccggaacgaat 43765182  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| ||||||||| |||||||||||||||||||||||||||    
T  43765181 ttgaccgatttttgaaaattcaaggacgaatttgaggtatt 43765141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 17515554 - 17515314
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaa-ggacacg 99  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||     
T  17515554 ttaaatctcaaatttttaccatttccatcaatttagtccttgtacacgtggctgccttattgacaagtgtacaagacaacacaacatgcaaaaggacaca 17515455  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||    
T  17515454 tcatcaccactaacggtgattttggacagagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagcgatgaat 17515355  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||| |||||||||||| ||||||||||||||    
T  17515354 ttggccaatttttaaaaattcaaggaagaatttgaggtatt 17515314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 42279737 - 42279511
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||    
T  42279737 tttaccatttccatcaaattagtccttgtacacgtgtctgccttgttgacacgtgtataagacaacacaacatgcaagaggacacatcatcaccactaac 42279638  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||  || |||||||     
T  42279637 agagcttttggacggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattctgagacgaattgagctgatttttg 42279538  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||| |||||||||||||||||    
T  42279537 aaaattcaatgacgaatttgaggtatt 42279511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 6 - 240
Target Start/End: Complemental strand, 2377268 - 2377033
Alignment:
Q  6 tctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatc 104  Q
    |||||||| ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  2377268 tctcgaatttttaccatttccatcaaattagtcctattacacgtggctgccttgttgacacgtgtacatgacaacacatcatgcaagaggacacgtcatc 2377169  T
Q  105 accactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggc 204  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||     
T  2377168 accactaacggagcttttagacggaggaaccattttgatggacgtctgtaaaattcagagactaaatatattttttgcaaaattcagggacgaatttggt 2377069  T
Q  205 cgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    | |||||| |||||||||  ||||||||||||||||    
T  2377068 caatttttgaaaattcaaaaacgaatttgaggtatt 2377033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 7884774 - 7884939
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  7884774 ttaagtctcgaatttttaccatttccatcaatttagtccttatacatgtggctgccttgttgacacgtgtacaagacaacacaacatgcaagggacatgt 7884873  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7884874 catcaccactaacggaacttttggacggagggaccattttgatggacgtctgtaaaattcagggac 7884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 7 - 214
Target Start/End: Complemental strand, 46197958 - 46197750
Alignment:
Q  7 ctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatca 105  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  |||||||||||||||| |||| || ||||||    
T  46197958 ctcgaatttttaccatttccatcaatttagtccttgtacacgtagctgccttgttgacacgtgcacataacaacacaacatgcaagaggaaacatcatca 46197859  T
Q  106 ccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggcc 205  Q
     |||||||||| |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||    
T  46197858 tcactaacggaacttttggacgaagggaccattttaatggacgtctgtaaaattcaggaactaaatagatattttgcaaaattcagagacgaatttgacc 46197759  T
Q  206 gatttttta 214  Q
    || ||||||    
T  46197758 gagttttta 46197750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 600953 - 600729
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||    
T  600953 ttaaatctcaaatttttaccatttccattaatttagtccttgtacacgtggctgctttgttgacacgtgtacatgacaacacaacatgcaagaggacacg 600854  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||                |||||||||||||||||| |||||||| | || |||    
T  600853 tcatcaccactaacggagcttttagacggagggaccattttgatggac----------------gactaaatagatattttgtaaaattcatgaacaaat 600770  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  600769 ttggtcgattttttaaaattcaaggatgaatttgaggtatt 600729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 48830720 - 48830885
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||    
T  48830720 tttaccatttccatcaaattagtccttgtacacgtggttgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacatcatcaccactaac 48830819  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 179  Q
     |||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  48830820 agagcttttggacggagggaccattttgatggacgtccgtaaaattcaaagactaaatagatattt 48830885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 44794434 - 44794212
Alignment:
Q  18 accatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacgga 116  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| | ||||||| | | ||| ||||||| | |||||||    
T  44794434 accatttccatcaatttagtccttgtacacgtggctgacttgctgacacgtgtacaggacaacaaagcatgcaagaagccacatcatcactattaacgga 44794335  T
Q  117 gcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaa 216  Q
     ||||||||||||||||| | |||||||||| |||| |||||||||||||||| | ||||||| |||||||||||||| ||| |||||||| |||| |||    
T  44794334 ccttttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccga-ttttcaaa 44794236  T
Q  217 attcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||    
T  44794235 attcaaggacgaatttgaggtatt 44794212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 44276096 - 44276266
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| || |||||||     
T  44276096 ttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgtcttgttgacacgtgtacatgacgacacaacatgtaagaggacaca 44276195  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaa 170  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  44276196 tcatcaccactaacagagcttttggacggagggaccattttgatgggcgtctgtaaaattcaaggactaaa 44276266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 3152125 - 3152358
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| || || |||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| | |||| || | | ||| |||||||    
T  3152125 tcgaattttgactatttccatcaatttagtccttgtacacgtggctgacttgctgacacgtgtacatgacaacaaagcatgtaagaagccacatcatcac 3152224  T
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
     | ||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||| | ||||||| |||||||||||||| ||| |||||||    
T  3152225 tattaacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccg 3152324  T
Q  207 attttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||| |||||  |||||||||||||    
T  3152325 atttttcaaaatttaaggataaatttgaggtatt 3152358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 238
Target Start/End: Complemental strand, 2660436 - 2660218
Alignment:
Q  21 atttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagct 119  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||||||||| | ||||||| | ||||||| | | ||| |||||   | |||| || ||    
T  2660436 atttccatcaatttagtccttgtacaagtggctgacttgctgacacgtgtagaggacaacaaagcatgcaagaagccacatcatcgttattaacagacct 2660337  T
Q  120 tttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaatt 219  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||| | ||||||| |||||||||||||||||| |||| |||||||| ||||||    
T  2660336 tttggacggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattcagggacgaaattggtcgatttttcaaaatt 2660237  T
Q  220 caaggacgaatttgaggta 238  Q
    |||||||||||||||||||    
T  2660236 caaggacgaatttgaggta 2660218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 19987497 - 19987692
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| ||||   || ||||||| | | |||     
T  19987497 ttaaatctcgaattttgaccatttccatcaatttagtccttgtacacgtgactgacttgttgacatgtgtacaggaca---cagcatgcaagaagccaca 19987593  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaa 198  Q
    ||||||| |||||| || |||||||||||||||||   |||||||||||| ||||||||| ||||||||| | ||||||| ||||||||||||||||||    
T  19987594 tcatcactactaacagaccttttggacggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattcagggacgaa 19987692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 23291659 - 23291574
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23291659 aaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttaaggtatt 23291574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 234
Target Start/End: Complemental strand, 23774363 - 23774162
Alignment:
Q  33 ttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttggacggagg 131  Q
    |||||||||| |||||||||| |||| ||| |||||||||||||||||||| ||||||  | ||||  ||| ||   ||||| ||||  || |||| |||    
T  23774363 ttagtccttgaacacgtggcttccttattgccacgtgtacaagacaacacatcatgcagggcgacagatcaacatggctaacagagcacttagacg-agg 23774265  T
Q  132 gaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatt 231  Q
    |||  ||||||||||||||||  ||||||||||||||||| ||||||| ||| |||| |||||||||||||||||| |  | ||||||||||||||||||    
T  23774264 gacttttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaaggacgaatt 23774165  T
Q  232 tga 234  Q
    |||    
T  23774164 tga 23774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 2378983 - 2379068
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| ||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  2378983 aaattcaaggactaaatagctattttgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtatt 2379068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 45257126 - 45257334
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| |||||||||| | || ||| |||||||||||||||||||||||||||  | | || |||| ||  |||||||||||  |||||    
T  45257126 atcaaattagtccttgaacacgtggcttcattcttgccacgtgtacaagacaacacaacatgcagggcggcatgtcagcatgactaacggagcacttgga 45257225  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    |||||||||  |||| |||||||||||  ||||||||| ||||| | |||||||| || |||| ||||| ||||||||||||    | |||||||||| |    
T  45257226 cggagggacattttttatggacgtctgacaaattcaggaactaagttgatattttacataattgagggatgaatttggccgacccgtgaaaattcaagaa 45257325  T
Q  226 cgaatttga 234  Q
    |||||||||    
T  45257326 cgaatttga 45257334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 611222 - 611307
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||| |||||||| ||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  611222 aaattcaggggctaaatagctatttcgaaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtatt 611307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 38193510 - 38193595
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  38193510 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 38193595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 41979352 - 41979437
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 41979437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 46308896 - 46308811
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  46308896 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 46308811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 53094273 - 53094358
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  53094273 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 53094358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 18430177 - 18430385
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| |||||||| | |||| ||| |||||||||||||||||||  ||||||  | |||| |||| ||   ||||||||||  |||||    
T  18430177 atcaaattagtccttgaacacgtggtttccttcttgccacgtgtacaagacaacacggcatgcagggcgacatgtcaccatggctaacggagcacttgga 18430276  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    |||||||||| ||||  ||||||||||  | ||||||||||||| | ||||||| ||| |||| ||||| ||||||||| ||    ||||||||||||||    
T  18430277 cggagggacctttttattggacgtctgacatattcagggactaagttgatatttcgcataattgagggatgaatttggctgacccgttaaaattcaagga 18430376  T
Q  226 cgaatttga 234  Q
    |||||||||    
T  18430377 cgaatttga 18430385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 234
Target Start/End: Original strand, 31887355 - 31887566
Alignment:
Q  24 tccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagctttt 122  Q
    |||||||| |||||||||| |||  ||||| |||| ||| |||||||||||||||||||| ||||||| | ||||  ||| ||   ||||||||||  ||    
T  31887355 tccatcaaattagtccttgaacatatggcttcctttttgccacgtgtacaagacaacacagcatgcaaggcgacaaatcagcatggctaacggagcactt 31887454  T
Q  123 ggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaa 222  Q
    ||||||||||||| ||||||| ||| ||||  ||||||||||||||| | ||||||| ||| |||| | ||  ||||||| |||||   | |||||||||    
T  31887455 ggacggagggacctttttgatagacatctgacaaattcagggactaagttgatatttcgcataattgatggttgaatttgaccgatccgtgaaaattcaa 31887554  T
Q  223 ggacgaatttga 234  Q
    ||||||||||||    
T  31887555 ggacgaatttga 31887566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 48634099 - 48633887
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa----cacaacatgcaaag-gacacgtcatcaccactaacggagcttt 121  Q
    ||||| |||||||||| |||||||||| |||| ||| ||||||||||||||||    |||| ||||||  | ||||  ||| ||   ||||||||||  |    
T  48634099 atcaaattagtccttgaacacgtggcttcctttttgccacgtgtacaagacaaacaacacatcatgcagggcgacagatcaacatggctaacggagcact 48634000  T
Q  122 tggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattca 221  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| | ||||||||||| ||||    | ||||||||    
T  48633999 tggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaatttgaccgacccgtgaaaattca 48633900  T
Q  222 aggacgaatttga 234  Q
    |||||||||||||    
T  48633899 aggacgaatttga 48633887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 3150341 - 3150256
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  3150341 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 3150256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 23888665 - 23888886
Alignment:
Q  14 atttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaa 112  Q
    |||| ||| ||| ||||| ||||||| || ||| |||||| |||| ||| |||| |||||||||||||||  |||||| | ||||  ||| ||   ||||    
T  23888665 attttccaattcaatcaaattagtccctgaacatgtggcttccttcttgccacgcgtacaagacaacacagtatgcaaggcgacagatcagcaaggctaa 23888764  T
Q  113 cggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttt 212  Q
    |||||  |||||||||||||||| ||||||||||||| ||  |||||||||||||||   ||||||| ||| |||| ||||||||| ||||||||  | |    
T  23888765 cggaggatttggacggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccgacgtgt 23888864  T
Q  213 taaaattcaaggacgaatttga 234  Q
     |||||||| ||||||||||||    
T  23888865 gaaaattcagggacgaatttga 23888886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 54900074 - 54900159
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||| || | ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  54900074 aaattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 54900159  T

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Target: chr3; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 234
Target Start/End: Original strand, 2977231 - 2977443
Alignment:
Q  23 ttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttt 121  Q
    ||||||||| |||||||||| ||| |||| | |||| ||| ||||||||  |||||||| | ||||||  | ||||  ||| || | ||||||||||  |    
T  2977231 ttccatcaaattagtccttgaacatgtggtttccttcttgccacgtgtattagacaacatagcatgcagggcgacaaatcagcatcgctaacggagcact 2977330  T
Q  122 tggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattca 221  Q
    ||| |||| ||||| ||||||||||||| ||  ||||| ||||||| ||| ||||||| ||| |||| ||||| ||||||||||||||  | ||||||||    
T  2977331 tgggcggatggacctttttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattca 2977430  T
Q  222 aggacgaatttga 234  Q
    |||||||||||||    
T  2977431 aggacgaatttga 2977443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 234
Target Start/End: Original strand, 40508853 - 40509025
Alignment:
Q  63 acacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattca 161  Q
    ||||||||||| ||||||||||||||||  | ||||  ||| ||| ||||||||| |  ||||||||||||||  ||||||||||||||||  |||||||    
T  40508853 acacgtgtacatgacaacacaacatgcagggcgacagatcagcacgactaacggaacacttggacggagggacatttttgatggacgtctgacaaattca 40508952  T
Q  162 gggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
     ||| ||| | ||||||| ||| |||| ||||||||||||||||||    | |||||||||||||||||||||    
T  40508953 aggattaagttgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcaaggacgaatttga 40509025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 30598426 - 30598341
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| |||| |||||| ||||| ||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  30598426 aaattcaaggacaaaatagctatttcgcaaaattcagggacaaatttgaccgatttttgaaaattcaaggacgaatttgaggtatt 30598341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 35903914 - 35903829
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | |||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||| |||||||||||||    
T  35903914 aaattcagggactaatttgatattttgcaaaattcagggatgaaattggctgatttttcaaaattcaaggacaaatttgaggtatt 35903829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 38191984 - 38191899
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| |||||| |||||| |||||| ||||||||||||||||||||    
T  38191984 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttgaggtatt 38191899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 42282473 - 42282558
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||| | ||||||| |||||||||||||||||||||||||||    
T  42282473 aaattcaaggactaaatagatatttcgcaaaattcagaaacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatt 42282558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 44268070 - 44267985
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| |||| |||||| ||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||    
T  44268070 aaattcaaggacaaaatagctatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaaggacgaatttgaggtatt 44267985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 46310436 - 46310521
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||| ||||||||| ||||||||| |||||||||||||||||    
T  46310436 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttgaggtatt 46310521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 53187831 - 53187746
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||    
T  53187831 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacaaatttgaggtatt 53187746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 5126024 - 5125884
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagctt 120  Q
    |||||||||| || |||||||||||||||||| | |||| ||||||||||||||||||||  |||||||  | ||||  ||| || |||||||||||| |    
T  5126024 tttccatcaaattggtccttgtacacgtggcttctttgtagacacgtgtacaagacaacaggacatgcaggacgacaactcagcagcactaacggagcat 5125925  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattca 161  Q
    |||||| || |||| |||||||||||||| ||| |||||||    
T  5125924 ttggaccgaaggactattttgatggacgtttgttaaattca 5125884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 194
Target Start/End: Original strand, 33852576 - 33852744
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| |||||||||| |||| ||| ||||| |||||||||||||||||||||  | |||| |||| ||   ||||||||||  |||||    
T  33852576 atcaaattagtccttgaacacgtggcttccttcttgccacgtctacaagacaacacaacatgcagggcgacatgtcaccatggctaacggagcacttgga 33852675  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcaggga 194  Q
    | |||||||| ||||||||||||||||  ||||||||  | ||||| ||||||| ||| |||| |||||    
T  33852676 cagagggacctttttgatggacgtctgataaattcagaaattaaattgatatttcgcataattgaggga 33852744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 41623875 - 41623735
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagctt 120  Q
    |||||||||| || |||||||||||||||||| |||||| ||||||| ||||||||||||  ||||||| || ||||  |||  | |||||||||||| |    
T  41623875 tttccatcaaattggtccttgtacacgtggcttccttgtagacacgtatacaagacaacaagacatgcagaacgacagctcagtagcactaacggagcat 41623776  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattca 161  Q
    ||| ||||| |||| |||||||||||||| ||| |||||||    
T  41623775 ttgaacggaaggactattttgatggacgtttgttaaattca 41623735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 7884927 - 7884984
Alignment:
Q  183 aaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7884927 aaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtatt 7884984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 44795890 - 44795975
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| ||||||| | ||||||| |||||||||||| ||||| || |||||||||| |||||||||||||||||||||||||||    
T  44795890 aaattcatggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttgaggtatt 44795975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 46609238 - 46609153
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | |||||||  ||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| ||||    
T  46609238 aaattcagggactaatttgatatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacgaatttgagatatt 46609153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 46611303 - 46611388
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||| |  |||||| |||||||||||||||||||||||||||    
T  46611303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgacaaatttttcaaaattcaaggacgaatttgaggtatt 46611388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 51686402 - 51686479
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||| |||||| |||||||| ||||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  51686402 ggactaaataaatatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacgaatttgaggtatt 51686479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 54412547 - 54412632
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||| ||||||||||||| | |||||||||| ||||||||||| || ||||||||||||||| ||||||||||||| ||||    
T  54412547 aaattcaggaactaaatagatatctcgcaaaattcaaggacgaatttgaccaattttttaaaattcacggacgaatttgagatatt 54412632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 2661908 - 2661992
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtat 239  Q
    ||||||| ||||||| | ||||||| |||||||||| ||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  2661908 aaattcatggactaatttgatatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggacgaatttgaggtat 2661992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 5133219 - 5133068
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagctt 120  Q
    |||||||||| || ||||| |||| |||| || | |||| ||||||||||||||||||||  |||||||  | ||||  ||| || |||||||||||| |    
T  5133219 tttccatcaaattggtcctcgtacgcgtgtcttctttgtagacacgtgtacaagacaacaggacatgcatgacgacagctcagcagcactaacggagcat 5133120  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaata 172  Q
    ||||||||| |||| |||||||||||||| ||| ||||||| |||| |||||    
T  5133119 ttggacggaaggactattttgatggacgtttgttaaattcaaggacaaaata 5133068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 48829437 - 48829360
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||| |||||||||||| |  |||||||| || |||| |||||||||||||||||||||||||||    
T  48829437 ggactaaatagatatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacgaatttgaggtatt 48829360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 53092712 - 53092627
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||| ||| | ||||||| |||||||||||||||||| |||||| |||||| |||||| || |||||||||||||||||    
T  53092712 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaagacgaatttgaggtatt 53092627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 234
Target Start/End: Original strand, 33113083 - 33113294
Alignment:
Q  23 ttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttt 121  Q
    ||||||||| |||||||||| |||||||||| |||| ||| ||||||||||||||| | ||||||||   | ||||  ||  ||   |||||||| |  |    
T  33113083 ttccatcaaattagtccttgaacacgtggcttcctttttgccacgtgtacaagacagcgcaacatgctgggcgacagatcggcatggctaacggatcact 33113182  T
Q  122 tggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattca 221  Q
    || ||||||||||| ||||||||||||||||  ||||| ||||||||| | ||||||| ||| |||| ||||| || |||||||||    | ||||||||    
T  33113183 tg-acggagggacctttttgatggacgtctgacaaatttagggactaagttgatatttcgcataattgagggatgattttggccgacccgtaaaaattca 33113281  T
Q  222 aggacgaatttga 234  Q
    ||||| |||||||    
T  33113282 aggactaatttga 33113294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 46114105 - 46114189
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga-ttttttaaaattcaaggacgaatttgaggta 238  Q
    |||||||  |||||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||  |||||||||||    
T  46114105 aaattcaatgactaaatagatatttcgcaaaattcaaggacaaatttggccgatttttttaaaattcaaggataaatttgaggta 46114189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 7883417 - 7883332
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||| ||||| | |||||||  ||||||| ||||||||| ||||||||||||| ||||||||| |||||| ||||||||||    
T  7883417 aaattcaggaactaatttgatatttcacaaaatttagggacgaaattggccgatttttcaaaattcaaagacgaaattgaggtatt 7883332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 45898349 - 45898462
Alignment:
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattc 220  Q
    ||||||||||||||| ||||||| ||||||||  ||||||| ||||||| | ||||||| ||| ||||||||||| || |||| |||  | | |||||||    
T  45898349 ttggacggagggacctttttgatagacgtctgacaaattcaaggactaagttgatatttcgcataattcagggacaaagttggtcgacgtgtgaaaattc 45898448  T
Q  221 aaggacgaatttga 234  Q
    | ||||||||||||    
T  45898449 agggacgaatttga 45898462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 24382799 - 24383007
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| |||||||||| |||| ||| | ||| || ||||||||||||||||||  | ||||  ||| ||   ||||||||    |||||    
T  24382799 atcaaattagtccttgaacacgtggcttcctttttgccccgtatataagacaacacaacatgcagggcgacatatcagcatggctaacggatgacttgga 24382898  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    |||||||||| ||||||||||||||||  |||| || ||||||| | |||||||  || |||| | ||| ||||||||||||    | ||||||||||||    
T  24382899 cggagggacctttttgatggacgtctgacaaatccatggactaagttgatatttctcataattgaaggatgaatttggccgacccgtaaaaattcaagga 24382998  T
Q  226 cgaatttga 234  Q
    | |||||||    
T  24382999 ccaatttga 24383007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 17516973 - 17517052
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
    ||||||| |||| |||||  ||||| |||||||||| | ||||||||| ||||||||| |||||||||||||||||||||    
T  17516973 aaattcaaggacaaaataactatttcgcaaaattcatgaacgaatttgaccgatttttgaaaattcaaggacgaatttga 17517052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 1846006 - 1845840
Alignment:
Q  23 ttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttt 121  Q
    |||| |||| |||||||||| |||||||||| |||| ||| |||||||| | |||| |||| ||||||  | ||||  ||| ||    |||||||||  |    
T  1846006 ttccttcaaattagtccttgaacacgtggcttcctttttgccacgtgtataggacatcacatcatgcagggcgacatatcaacatggttaacggagcact 1845907  T
Q  122 tggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 188  Q
    |||||||||||||  ||||||||||||||||| |||||||  |||||| | ||||||||||| ||||    
T  1845906 tggacggagggacgtttttgatggacgtctgtcaaattcaaagactaagttgatattttgcataatt 1845840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 21350605 - 21350690
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| |||| |||||| ||||| |||||||||||  ||||||||||||||||||  |||| ||| ||| ||||||||||||||    
T  21350605 aaattcaaggacaaaatagctatttcgcaaaattcagtaacgaatttggccgattttaaaaaaatcacggatgaatttgaggtatt 21350690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 28626500 - 28626415
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||  | ||||||| | | |||||||||||||| ||| ||||||||| ||||||||||||| | |||||||||||    
T  28626500 aaattcagggactattttgatatttcgaataattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtatt 28626415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 41021008 - 41021117
Alignment:
Q  125 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagg 224  Q
    ||||||||||| ||||||||||||||||  |||||||||||  |||| || |||| ||| |||| |||||| |||||||||||    | |||||||| ||    
T  41021008 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 41021107  T
Q  225 acgaatttga 234  Q
    ||||||||||    
T  41021108 acgaatttga 41021117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 26449190 - 26449258
Alignment:
Q  20 catttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatg 88  Q
    |||||||||||| || |||||||| || |||||| ||||||| |||||| |||||||||||||||||||    
T  26449190 catttccatcaaattggtccttgtccatgtggcttccttgttaacacgtatacaagacaacacaacatg 26449258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 35572525 - 35572601
Alignment:
Q  156 aattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaattt 232  Q
    |||||| ||||||||||| |||||| ||||||||||| || |||||   | ||||||||||||||||||||||||||    
T  35572525 aattcaaggactaaatagctatttttcaaaattcaggaacaaatttaatcaattttttaaaattcaaggacgaattt 35572601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 27897239 - 27897155
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||| |||||||||| || || |||||||||| |||||||||||  | ||||||||||||| ||| | ||||||||||||||    
T  27897239 aaattcagagactaaatagctaatt-gcaaaattcatggacgaatttgatccattttttaaaatttaagaaagaatttgaggtatt 27897155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 54092892 - 54092764
Alignment:
Q  40 ttgtacacgtggctg-ccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagggaccat 137  Q
    ||||||||||||||  |||||||||||||||||||||||||||  ||||||   | || |  ||  || | ||||| |||| |||||||||| |||| ||    
T  54092892 ttgtacacgtggctttccttgttgacacgtgtacaagacaacaggacatgctggatgagagctcggcagctctaacagagcatttggacggaaggactat 54092793  T
Q  138 tttgatggacgtctgtaaaattcagggac 166  Q
    |||||||||||| ||| ||||||||||||    
T  54092792 tttgatggacgtttgttaaattcagggac 54092764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 1847647 - 1847726
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
    ||||||||||| ||||| ||||||||||| |||| ||||| ||||||||||||    | ||||||||||||| |||||||    
T  1847647 aaattcagggattaaattgatattttgcataattgagggatgaatttggccgacccgtgaaaattcaaggacaaatttga 1847726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 41944776 - 41944715
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||||||||||||||||| |||||||| |||| |||| ||  |||||||||||| |||||||    
T  41944776 tttccatcaatttagtccctgtacacgcggcttcctttttcccacgtgtacaagccaacaca 41944715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 33051467 - 33051515
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttgg 203  Q
    |||||||||||| |||| |||||||||||||||| |||||||| |||||    
T  33051467 aaattcagggacgaaattgatattttgcaaaatttagggacgattttgg 33051515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 43767047 - 43767094
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttg 202  Q
    ||||||| |||| |||||| |||||||||||||||||||| |||||||    
T  43767047 aaattcaaggacaaaatagctattttgcaaaattcagggatgaatttg 43767094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 45897139 - 45897060
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||| ||||||||    | |||||||||||||||| ||||    
T  45897139 aaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcaaggacgaagttga 45897060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 48635375 - 48635454
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||||||| |||||   | |||||||| ||||||| ||||    
T  48635375 aaattcagggattaaattgatatttcgcataattaagggacgaatttgaccgatccgtgaaaattcagggacgaaattga 48635454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 17238300 - 17238246
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 81  Q
    ||||| || ||||||||||||||| || |||||||||||| |||||||| |||||    
T  17238300 atcaaattggtccttgtacacgtgacttccttgttgacacctgtacaaggcaaca 17238246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 25535250 - 25535331
Alignment:
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttg 202  Q
    |||||||||||||  | |||| ||||||||||| ||||||||||||||| |  |||||| | ||||||  ||| ||||||||    
T  25535250 ttggacggagggatgaatttggtggacgtctgttaaattcagggactaacttaatatttcgaaaaattggggggcgaatttg 25535331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 51454158 - 51454215
Alignment:
Q  33 ttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca 90  Q
    |||||||||| |||||||||  |||| ||| |||||||| ||||||||||| ||||||    
T  51454158 ttagtccttgaacacgtggcctccttcttgccacgtgtataagacaacacatcatgca 51454215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 51454251 - 51454364
Alignment:
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattc 220  Q
    |||||| |||||||  |||| ||||| || ||  |||||||  |||||| | ||||||| ||| |||| ||| | |||||||||||||   | |||||||    
T  51454251 ttggacagagggacattttttatggatgtttgacaaattcaaagactaatttgatatttcgcataattgaggaatgaatttggccgatccgtgaaaattc 51454350  T
Q  221 aaggacgaatttga 234  Q
    ||||||||||||||    
T  51454351 aaggacgaatttga 51454364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 23876965 - 23877037
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 179  Q
    |||||||||||   |||||||||||||  | |||||||||||| ||| |||||||| |||||| | |||||||    
T  23876965 cactaacggagggattggacggagggatgaatttgatggacgtttgttaaattcagagactaatttgatattt 23877037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 79)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 8609688 - 8609927
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||    
T  8609688 ttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgtcgacacgtgtacaagacaacacagcatgcaagggacacgt 8609787  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8609788 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 8609887  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  8609888 tggccgattttttaaaattcaagaacgaatttgaggtatt 8609927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 13108237 - 13108476
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  13108237 ttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagggacacgt 13108336  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||| |||    
T  13108337 catcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatt 13108436  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    | ||||||||||||||||||||||||||||||||| ||||    
T  13108437 tagccgattttttaaaattcaaggacgaatttgagttatt 13108476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 38547471 - 38547232
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    |||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  38547471 ttaagtatcgaatttttatcatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagggacacgt 38547372  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||| ||||| |||    
T  38547371 catcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtatt 38547272  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  38547271 tggccgattttttaaaattcaaggacgaacttgaggtatt 38547232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 42942018 - 42941778
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||| |||||||     
T  42942018 ttaaatctcgaatttttaccatttccatcaatttagtccttgtacatgtggctgccttgttgacacgtgtacctgacaacacaacatgcaagaggacaca 42941919  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||| |||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  42941918 tcatctccactaacggagattttggacggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacgaat 42941819  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  42941818 ttggctgattttttaaaattcaaggacgaatttgaggtatt 42941778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 5036693 - 5036449
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  5036693 ttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaagaggacaca 5036594  T
Q  100 tcatcaccactaacggagcttt----tggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggac 195  Q
    |||||| ||||||| |||||||    ||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||  ||||||||||||||    
T  5036593 tcatcatcactaacagagctttaatttggacggagagaccattttgatagacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagggac 5036494  T
Q  196 gaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||    
T  5036493 gaatttgacggattttttaaaatttaaggacgaatttgaggtatt 5036449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 13485999 - 13486239
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||| |||||||     
T  13485999 ttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtgactgccttgttgacacgtgtacagggcaacacaacatgcaagaggacaca 13486098  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||    
T  13486099 tcatcactactaatggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatccagagacgaat 13486198  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
     || ||||||||| |||||||||| || |||||||||||||    
T  13486199 ctgaccgatttttaaaaattcaagcacaaatttgaggtatt 13486239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 41042484 - 41042724
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| ||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| || ||||||||| ||||||| |||||||     
T  41042484 ttaaatcttgaatttttacaatttccatcaatttagtccttgtacccgtggctgccttgttgacacatgtgcaggacaacacagcatgcaagaggacaca 41042583  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  41042584 tcatcaccactaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggacaaat 41042683  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| ||||||||||||||||||||| |||| |||||||    
T  41042684 ttggccaattttttaaaattcaaggacggatttaaggtatt 41042724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 15 - 240
Target Start/End: Original strand, 26242228 - 26242454
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||||||||||||| |||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  26242228 tttaccatttccatcaaattagttattgtacacatggttgccttgttgacacgtgtacaagacaacacaacatgcaagaggacacatcatcgccactaac 26242327  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| |||||||     
T  26242328 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacgaatttggctgatttttg 26242427  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||| ||||| ||||||||||    
T  26242428 aaaattcaagaacgaaattgaggtatt 26242454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 15 - 240
Target Start/End: Original strand, 7745026 - 7745252
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  7745026 tttaccatttccatcaaattagtccttgtacatatgactgccttgttgacacgtgtacaagacaacacatcatgcaagaggacacatcatcaccactaac 7745125  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||||||||| |||||||||||| |||||||     
T  7745126 ggagcttttggatggagggaccattttgatggatgtctgtaaaatacagggactaaataaatatttcgcaaaattcagagacgaatttggctgatttttg 7745225  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||| |||||||||||| ||||    
T  7745226 aaaattcaaagacgaatttgagatatt 7745252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 2 - 240
Target Start/End: Complemental strand, 13282707 - 13282482
Alignment:
Q  2 taagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgtc 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||              || | |||||||||||||||||| | ||||||| |||||| ||    
T  13282707 taagtctcgaatttttaccatttccatcaatttagtccttgtag-------------gtagccacgtgtacaagacaacagagcatgcaagggacacatc 13282621  T
Q  102 atcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaattt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13282620 atcaccactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaattt 13282521  T
Q  202 ggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13282520 ggccgattttttaaaattcaaggacgaatttgaggtatt 13282482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 9673065 - 9673296
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||     
T  9673065 ttaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaagacaca 9673164  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  9673165 tcatcaccactaacgaagcttttagacggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaat 9673264  T
Q  200 ttggccgattttttaaaattcaaggacgaatt 231  Q
    || ||  |||  | || |||||||||||||||    
T  9673265 ttagctaattgatgaagattcaaggacgaatt 9673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 15 - 240
Target Start/End: Original strand, 41825558 - 41825784
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||||||| ||||| |||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||| | ||||| ||||||| ||||||    
T  41825558 tttaccatttctatcaaattagtccttgtacacgtgactgccttgttgacatgtgtacaggacaacacagcatgcaagaagacacatcatcactactaac 41825657  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    |||||||     
T  41825658 agagcttttggacggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttatttgatttttg 41825757  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||||||||    
T  41825758 aaaattcaaggacgaatttgaggtatt 41825784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 22272547 - 22272338
Alignment:
Q  34 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggaggg 132  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| || |||| |||||||||||||||||||||||||| ||||||    
T  22272547 tagtccttgtacacgtggctgccttgttgacacatgtacatgacaacacaacatgcaagagaacacatcatcaccactaacggagcttttggatggaggg 22272448  T
Q  133 accattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga--ttttttaaaattcaaggacgaat 230  Q
    || |||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| | ||  ||||||||||||||| |||||||    
T  22272447 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcagggacgaatttgactgattttttttaaaattcaaagacgaat 22272348  T
Q  231 ttgaggtatt 240  Q
    ||||||||||    
T  22272347 ttgaggtatt 22272338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 27691391 - 27691158
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| || ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| | ||||||| | | ||| |||||||    
T  27691391 tcgaattttgaccatttccatcaatttagtccttgtacacgtggctgacttgctgacacgtgtacaggacaacaaagcatgcaagaagccacatcatcac 27691292  T
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
     | | ||||| |||||||||||||||||   |||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||| |||||||    
T  27691291 tattgacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccg 27691192  T
Q  207 attttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||||||||||||||||||||||||    
T  27691191 atttttcaaaattcaaggacgaatttgaggtatt 27691158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 40339580 - 40339759
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgc-aaaggacacg 99  Q
    |||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||     
T  40339580 ttaaatctcgaatttttaccatttccatccatttagtccttgtacacgtggctgccttgttgacaggtgtacatgacaacacaacatgcaaaaggataca 40339679  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 179  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  40339680 tcatcactactaacggagcttttggatgaagggaccattttgatggacatctgtaaaattcatggactaaatagatattt 40339759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 33708711 - 33708943
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| || || ||||||||||||||||||||||||||||||| || |||| |||| ||||| || ||||||| | ||||||| | | ||| |||||||    
T  33708711 tcgaattttgacaatttccatcaatttagtccttgtacacgtggttgacttgctgacgcgtgtgcatgacaacaaagcatgcaagaagccacatcatcac 33708810  T
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
     | ||||||| |||||||||||||||||   |||||||||||| ||||||||||||||||||| |  |||||| |||||||||||||||||| ||| |||    
T  33708811 tattaacggaccttttggacggagggacagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattcagggacgaaattgaccg 33708910  T
Q  207 attttttaaaattcaaggacgaatttgaggtatt 240  Q
     |||||||||||||||||| ||||||||||||||    
T  33708911 -ttttttaaaattcaaggatgaatttgaggtatt 33708943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 42943426 - 42943511
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42943426 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 42943511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 22273891 - 22273976
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  22273891 aaattcagggactaaatagatattttgcaaaattcagagacaaatttggccgattttttaaaattcaaggacaaatttgaggtatt 22273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 9184608 - 9184393
Alignment:
Q  20 catttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagc 118  Q
    |||||||||||| || ||| |||||||||||| | |||||||||||| |||||||||||||||| ||||||  | ||||  ||| || |||||| | |||    
T  9184608 catttccatcaaattggtctttgtacacgtggattccttgttgacacatgtacaagacaacacatcatgcagggcgacagatcagcagcactaatgaagc 9184509  T
Q  119 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaat 218  Q
     |||||||||||||||||||| ||| ||||||||  ||||||||||||||| | ||||||| ||  | ||  | |||||||||||||||||  |  ||||    
T  9184508 atttggacggagggaccatttcgatcgacgtctgacaaattcagggactaatttgatatttcgcgtagttgggcgacgaatttggccgattcgtgcaaat 9184409  T
Q  219 tcaaggacgaatttga 234  Q
    ||||||||||| ||||    
T  9184408 tcaaggacgaaattga 9184393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 27692837 - 27692922
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  27692837 aaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 27692922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 34681074 - 34681151
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34681074 ggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtatt 34681151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 42897680 - 42897888
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| |||||||||| |||| ||| |||||||||||||||||||| ||||||  | ||||  ||| ||   ||||| ||||  |||||    
T  42897680 atcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcaggacgacagatcagcatggctaacagagcacttgga 42897779  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    |||||||||| ||||||||||||||||  ||||||| ||||||| | |||||||  || |||| ||||||||||||||||||    | ||||||||||||    
T  42897780 cggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacgaatttggccgacccgtaaaaattcaagga 42897879  T
Q  226 cgaatttga 234  Q
    || ||||||    
T  42897880 cggatttga 42897888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 26238807 - 26238730
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  26238807 ggactaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatt 26238730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 601704 - 601789
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  601704 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 601789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 33762713 - 33762798
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  33762713 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 33762798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 38548831 - 38548916
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||| ||| | ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  38548831 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 38548916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 37525929 - 37526137
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| |||||||||| |||| ||| |||||||| ||||||||||||||| ||  | ||||  ||| ||  |||||| | ||  |||||    
T  37525929 atcaaattagtccttgaacacgtggcttccttcttgccacgtgtataagacaacacaacatacaggacgacagatcaacatgactaacagcgcacttgga 37526028  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    |||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| ||| |||| | | | ||||||| ||||    | ||||||||||||    
T  37526029 cggagggacctttttgatggatgtctgaaaaattcagggactaagttgatatttcgcataattgaagaatgaatttgaccgacgcgtgaaaattcaagga 37526128  T
Q  226 cgaatttga 234  Q
    |||||||||    
T  37526129 cgaatttga 37526137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 208
Target Start/End: Original strand, 33750277 - 33750472
Alignment:
Q  14 atttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaa 112  Q
    |||| ||| ||| ||||| || |||| || |||| ||||| |||| ||| |||| ||||||||||||||||||||||| | ||||  ||| || | ||||    
T  33750277 attttccaattcaatcaaattcgtccctgaacacatggcttccttcttgccacgcgtacaagacaacacaacatgcaagacgacagatcaacatcgctaa 33750376  T
Q  113 cggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgat 208  Q
    | ||||  ||||||||||||||| |||||||| | |||||  ||||||||||||||| | ||||||| ||| |||| ||||||||| |||||||||    
T  33750377 cagagcacttggacggagggacctttttgatgaatgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgat 33750472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 5038062 - 5038146
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||| ||||| |||||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  5038062 aaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaattcaa-gacgaatttgaggtatt 5038146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 13106893 - 13106808
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||| |||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttaaggtatt 13106808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 29237240 - 29237155
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  29237240 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 29237155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 29239187 - 29239272
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 29239272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 33707295 - 33707210
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  33707295 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 33707210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 33761158 - 33761073
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||||| ||||||| ||||||||| |||||||||||||||||    
T  33761158 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaagacgaatttgaggtatt 33761073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 35509303 - 35509218
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||    
T  35509303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggactaatttgaggtatt 35509218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 240
Target Start/End: Original strand, 27406907 - 27407037
Alignment:
Q  110 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatt 209  Q
    |||||||  |||||||||||| |||   |||||||||||||||||||||||||||||||  |  |||||| | | |||||| ||||||| |||||| |||    
T  27406907 taacggacattttggacggagagactgatttgatggacgtctgtaaaattcagggactattttaatatttcgaataattcatggacgaaattggccaatt 27407006  T
Q  210 ttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| ||||||||||||| | |||||||||||    
T  27407007 tttcaaaattcaaggactattttgaggtatt 27407037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 207
Target Start/End: Complemental strand, 1320835 - 1320654
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| |||||||||| |||| ||| |||||||||||||||||| | ||||||  | |||| |||| ||   || ||||| |  |||||    
T  1320835 atcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacatagcatgcagggcgacatgtcaccatggctgacggaacacttgga 1320736  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    |||| ||||| | || |||||||||||  ||||||||||||||| | ||||||||||| |||| ||||| |||||| |||||    
T  1320735 cggaaggaccttatttatggacgtctgacaaattcagggactaagttgatattttgcataattgagggatgaatttagccga 1320654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 13283995 - 13284080
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| ||||||| | ||||||| ||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||||    
T  13283995 aaattcatggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgtggtatt 13284080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 35510819 - 35510904
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | |||||||  ||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  35510819 aaattcagggactaatttgatatttcacaaaattcaaggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 35510904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 15305931 - 15305815
Alignment:
Q  110 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatt 209  Q
    |||||||  ||||||||||||||||   |||||||||||||||||||||||||||||||| | |||||||   | ||||||||||| || ||| || |||    
T  15305931 taacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatt 15305832  T
Q  210 ttttaaaattcaaggac 226  Q
    ||| |||||||||||||    
T  15305831 tttcaaaattcaaggac 15305815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 15486300 - 15486184
Alignment:
Q  110 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatt 209  Q
    |||||||  ||||||||||||||||   |||||||||||||||||||||||||||||||| | |||||||   | ||||||||||| || ||| || |||    
T  15486300 taacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatt 15486201  T
Q  210 ttttaaaattcaaggac 226  Q
    ||| |||||||||||||    
T  15486200 tttcaaaattcaaggac 15486184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 234
Target Start/End: Original strand, 38882699 - 38882911
Alignment:
Q  23 ttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttt 121  Q
    |||||| || || ||||||| ||||||| || |||||||| |||| ||||||||||||||| ||||||  | ||||  ||| ||   ||||||||||  |    
T  38882699 ttccattaaattggtccttgaacacgtgacttccttgttgccacgagtacaagacaacacagcatgcaggacgacagatcaacatggctaacggagcact 38882798  T
Q  122 tggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattca 221  Q
    |||||||||||||  |||| |||||||||||  ||||||||||| ||||| ||||| | ||| | || | ||| ||||||| |||||   | ||||||||    
T  38882799 tggacggagggacattttttatggacgtctgacaaattcagggattaaattgatatctcgcatagttgaaggatgaatttgaccgatccgtgaaaattca 38882898  T
Q  222 aggacgaatttga 234  Q
    |||||||||||||    
T  38882899 aggacgaatttga 38882911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 160
Target Start/End: Complemental strand, 11788544 - 11788405
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagctt 120  Q
    |||||||||| || |||||||||||| |||||| ||   |||||||||||||| |||||||||||| ||| | ||||| ||| || ||||||| ||| |     
T  11788544 tttccatcaaattggtccttgtacacatggctgactatatgacacgtgtacaaaacaacacaacatacaagaagacacctcagcatcactaacagagata 11788445  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattc 160  Q
    |||||||||||||  | |||||||||||||||| ||||||    
T  11788444 ttggacggagggatgaatttgatggacgtctgttaaattc 11788405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 8608327 - 8608241
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaatt-cagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||| |||||||||| ||| ||||||||| ||||||||||||||||||| |||||||    
T  8608327 aaattcagggactaatttgatatttcgcaaaatttcagggacgaaattgaccgatttttcaaaattcaaggacgaatttaaggtatt 8608241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 207
Target Start/End: Complemental strand, 8654717 - 8654537
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| ||| |||||| |||| ||| ||||||||||||||||||   ||||||  | |||| |||| ||   ||||||||||  |||||    
T  8654717 atcaaattagtccttgaacatgtggcttccttcttgccacgtgtacaagacaacattgcatgcagggcgacatgtcagcatggctaacggagcacttgga 8654618  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    |||||||||| ||||||||||||||||  ||||||| | | ||||| ||||||| ||| |||| ||| ||||||||| ||||    
T  8654617 cggagggacccttttgatggacgtctgataaattcaagaattaaat-gatatttcgcataattgaggaacgaatttgaccga 8654537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 13484634 - 13484553
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgagg 236  Q
    ||||||| |||| |||||   |||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  13484634 aaattcaaggacaaaataacaatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgagg 13484553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 15308261 - 15308346
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | | |||||||||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  15308261 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatt 15308346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 15488630 - 15488715
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | | |||||||||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  15488630 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatt 15488715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 31821541 - 31821428
Alignment:
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattc 220  Q
    ||||||||||||||| ||||||||||||||||  |||||| |||||||| | ||||||| ||| |||| ||||||||| ||| ||||  | | |||||||    
T  31821541 ttggacggagggacctttttgatggacgtctgataaattctgggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgtgaaaattc 31821442  T
Q  221 aaggacgaatttga 234  Q
    | ||||||||||||    
T  31821441 agggacgaatttga 31821428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 41823971 - 41823894
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||| |||||||||| ||||||| || || ||||||| ||||||||||||||||||| |||||||    
T  41823971 ggactaaatagatatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaaggacgaatttaaggtatt 41823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 43262145 - 43262222
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||| |||||||| |||| ||||||| || ||||||| |||||| ||||||||||||||||||||    
T  43262145 ggactaaatagatatttcgcaaaatttagggtcgaatttagctgatttttgaaaatttaaggacgaatttgaggtatt 43262222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 204
Target Start/End: Original strand, 11722730 - 11722893
Alignment:
Q  42 gtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagggaccatttt 140  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||| | ||||  ||| || || ||| ||||| | ||||||||||||  | |||    
T  11722730 gtacacgtggcttccttgttgacacgtgtacaacacaacacaacatgcaagacgacatatcagcatcagtaatggagcatctggacggagggatgaattt 11722829  T
Q  141 gatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggc 204  Q
    ||| ||||| ||| |||||||  ||| ||||||| |||| |  |||||   |||||||||||||    
T  11722830 gattgacgtttgttaaattcaaagacgaaatagacatttcgataaattagtggacgaatttggc 11722893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 31201148 - 31201230
Alignment:
Q  125 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||||||||||||||  ||||||||||| ||||| ||||||| ||| |||| | ||||||||||||||||    
T  31201148 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacgaatttggccga 31201230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 3152046 - 3151969
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaattt 232  Q
    ||||| ||||||||||||| ||||||| |||| |||||||| ||||||||| ||||||| |||||||||||| |||||    
T  3152046 aaattaagggactaaatagctattttgaaaaactcagggacaaatttggccaatttttttaaattcaaggacaaattt 3151969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 9672066 - 9671981
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||||||||||||||| |||||||||| |||||||||||   ||||  | ||||||||||||||||||| |||||||    
T  9672066 aaattcggggactaaatagatatttcgcaaaattcatggacgaatttgattgattggtgaaaattcaaggacgaatttaaggtatt 9671981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 15145663 - 15145808
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagctt 120  Q
    |||| ||||| || ||||||||||| |||||| |||||| ||||||||||||||||||||   |||| |  | ||||  ||| || ||||||| |||| |    
T  15145663 tttcaatcaaattggtccttgtacatgtggcttccttgtcgacacgtgtacaagacaacaagccatgtaggaagacaactcaacagcactaacagagcat 15145762  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    ||||||||| |||| |||||||| ||||| ||| ||||||||||||    
T  15145763 ttggacggaaggactattttgatcgacgtttgttaaattcagggac 15145808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 32822484 - 32822371
Alignment:
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattc 220  Q
    ||||||||| ||||| ||||||||||| ||||  ||||||||||||||| | ||||||||  | |||| ||||| |||||||||||||   | |||||||    
T  32822484 ttggacggaaggacctttttgatggacatctgacaaattcagggactaagttgatattttaaataattgagggatgaatttggccgatccataaaaattc 32822385  T
Q  221 aaggacgaatttga 234  Q
    ||||||||| ||||    
T  32822384 aaggacgaagttga 32822371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 41040809 - 41040724
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| |||| |||||| ||||||| |||||||||  |||||||| |||||||||| ||||||||| ||| |||||||||||||    
T  41040809 aaattcaaggacaaaatagctattttggaaaattcagaaacgaatttagccgatttttaaaaattcaaagacaaatttgaggtatt 41040724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 33160155 - 33160262
Alignment:
Q  127 ggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggac 226  Q
    ||||||||| ||||||||| ||||||  |||||||| |||||| | |||||||  || |||| ||||| ||||||||||||  | | |||||||||||||    
T  33160155 ggagggacctttttgatgggcgtctgacaaattcagagactaagttgatatttcacataattgagggatgaatttggccgacctgtgaaaattcaaggac 33160254  T
Q  227 gaatttga 234  Q
    ||||||||    
T  33160255 gaatttga 33160262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 462371 - 462484
Alignment:
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattc 220  Q
    ||||| ||||||| | ||||||||||||| ||  ||||||| ||||||| | ||||||| ||| |||| | ||| ||||||||||||| | | |||||||    
T  462371 ttggatggagggatctttttgatggacgtttgacaaattcaaggactaagttgatatttcgcataattgacggatgaatttggccgatctgtaaaaattc 462470  T
Q  221 aaggacgaatttga 234  Q
    || |||||||||||    
T  462471 aatgacgaatttga 462484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 27404299 - 27404214
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||| ||||||||  | ||||||| | | |||||||||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  27404299 aaatttagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatt 27404214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 28433638 - 28433702
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaaca 86  Q
    |||||||||||||||||| ||||||||||||| |||| ||  |||||||||||| ||||||||||    
T  28433638 tttccatcaatttagtccatgtacacgtggcttcctttttcccacgtgtacaagccaacacaaca 28433702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 600819 - 600764
Alignment:
Q  185 aattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| ||||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  600819 aattcaaggacgaaattggctgatttttcaaaattcaaggacgaatttgaggtatt 600764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 234
Target Start/End: Original strand, 28433704 - 28433830
Alignment:
Q  108 actaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||| | ||||||||||||||||| |  | ||||||||||    ||||||||||||||  | ||||||| |  ||||| ||||||||||||||||||    
T  28433704 actaacgaaccttttggacggagggacgaaatcgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgagggacgaatttggccga 28433803  T
Q  208 ttttttaaaattcaaggacgaatttga 234  Q
    |  || |||||||| ||||||| ||||    
T  28433804 tccttgaaaattcagggacgaaattga 28433830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 6164726 - 6164657
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa 91  Q
    |||||||||| || |||||||||||||||| |  ||| ||||||||||||||||| ||||| ||||||||    
T  6164726 tttccatcaaattggtccttgtacacgtggttttcttattgacacgtgtacaagataacacgacatgcaa 6164657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 37801648 - 37801541
Alignment:
Q  63 acacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattca 161  Q
    |||||||||||||||||||   ||||||  | ||||  ||| ||||||||||| | | |||||||||| |||||| |||||| ||||| ||| |||||||    
T  37801648 acacgtgtacaagacaacaagccatgcaggaagacaactcagcaccactaacgaaccatttggacggaaggaccaatttgattgacgtttgttaaattca 37801549  T
Q  162 gggactaa 169  Q
    ||||||||    
T  37801548 gggactaa 37801541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 5075479 - 5075378
Alignment:
Q  133 accattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaattt 232  Q
    |||||||||||||||||  |  ||||||| |||| |||| ||||||| ||||||||  ||||||| |||||| |||  ||  ||||||||||||||| ||    
T  5075479 accattttgatggacgtgagagaaattcaaggacaaaattgatatttcgcaaaatttggggacgattttggctgatgcttgcaaattcaaggacgaagtt 5075380  T
Q  233 ga 234  Q
    ||    
T  5075379 ga 5075378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 204
Target Start/End: Original strand, 40020622 - 40020719
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggc 204  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  ||||||||||||||    
T  40020622 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggc 40020719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 15562503 - 15562439
Alignment:
Q  165 actaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaa 229  Q
    ||||||| |||||||| ||||||| | ||||||||||| | ||||||| ||||||||| ||||||    
T  15562503 actaaattgatattttacaaaatttaaggacgaatttgactgatttttaaaaattcaaagacgaa 15562439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 27406855 - 27406891
Alignment:
Q  18 accatttccatcaatttagtccttgtacacgtggctg 54  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27406855 accatttccatcagtttagtccttgtacacgtggctg 27406891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 44526801 - 44526694
Alignment:
Q  63 acacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattca 161  Q
    |||||||||||||||||||   ||||||| | ||||  ||| |||||||||| |||| |||| ||||| |||| | |||||| | ||| ||| |||||||    
T  44526801 acacgtgtacaagacaacaagccatgcaagacgacaactcagcaccactaacagagcatttgaacggaaggactaatttgattggcgtttgttaaattca 44526702  T
Q  162 gggactaa 169  Q
    ||||||||    
T  44526701 gggactaa 44526694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 44620671 - 44620750
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
    |||||||||||| |||| ||||||||||||||||  ||||||| |||| |||||  ||  ||||||| ||||||| ||||    
T  44620671 aaattcagggacgaaattgatattttgcaaaatttggggacgattttgaccgatgcttgcaaattcagggacgaagttga 44620750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15306000 - 15305947
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctg 54  Q
    |||||| | |||| || ||||||||||||| ||||||||||||| |||||||||    
T  15306000 ttaagttttgaattttgaccatttccatcagtttagtccttgtatacgtggctg 15305947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15486369 - 15486316
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctg 54  Q
    |||||| | |||| || ||||||||||||| ||||||||||||| |||||||||    
T  15486369 ttaagttttgaattttgaccatttccatcagtttagtccttgtatacgtggctg 15486316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 40020557 - 40020618
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||||||||||||||||| ||||||||||| |  ||| ||  |||||||||||| |||||||    
T  40020557 tttccatcaatttagtccctgtacacgtggttttctttttcccacgtgtacaagccaacaca 40020618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 17807108 - 17807060
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttgg 203  Q
    |||||| ||||||||||| |||||||||||||||   ||||||||||||    
T  17807108 aaattcggggactaaataaatattttgcaaaatttgaggacgaatttgg 17807060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 31199574 - 31199522
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| |||||||  || |||| ||||||||||||||||||    
T  31199574 aaattcagggattaaattgatatttctcataattaagggacgaatttggccga 31199522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 40019245 - 40019193
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||| ||||||||    
T  40019245 aaattcagggattaaattgatatttcgcataattgagggacgaagttggccga 40019193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 42894865 - 42894817
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttgg 203  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||||||||    
T  42894865 aaattcagggattaaattgatatttcgcataattaagggacgaatttgg 42894817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 34778019 - 34778258
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  34778019 ttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaatatgcaagggacacgt 34778118  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||| |||||||||||||||| |||    
T  34778119 catcaccactaacggagcttttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatt 34778218  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34778219 tggccgattttttaaaattcaaggacgaatttgaggtatt 34778258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 4855847 - 4856086
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4855847 ttaagtctcaaatttttaccatttccatcaatttagtccttgtacacgtgactgccttgttgacacgtgtacaagacaacacaacatgcaagggacacgt 4855946  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||| |||    
T  4855947 catcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatt 4856046  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4856047 tggccgattttttaaaattcaaggacgaatttgaggtatt 4856086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 6818558 - 6818798
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||| ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |    
T  6818558 ttaaatctcaaatttttaccatttctatcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacatg 6818657  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |    
T  6818658 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagt 6818757  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6818758 ttggccgattttttaaaattcaaggacgaatttgaggtatt 6818798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 27087526 - 27087287
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |    
T  27087526 ttaagtctcgaatttttaccatttccatcaattcagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagggacacat 27087427  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  27087426 catcaccactaacggagcttttggacggatgggccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatt 27087327  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    || |||||||||||||||| ||||||||||||||||||||    
T  27087326 tgaccgattttttaaaatttaaggacgaatttgaggtatt 27087287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 25278248 - 25278488
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||    
T  25278248 ttaaatctcgaatttttaccatttccatcaatttagtccttatacacgtggctgccttgttgacacgtgtacatgacagcacatcatgcaagaggacacg 25278347  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  25278348 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaat 25278447  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  25278448 ttgaccgattttttaaaattcaaggacgaatttgaggtatt 25278488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 31238375 - 31238615
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| || ||||||||    
T  31238375 ttaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacagcatggaagaggacacg 31238474  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  31238475 tcatcaccactaacggagcttttggacagatggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaat 31238574  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  31238575 ttggccgattttttaaaattcaaggacaaatttgaggtatt 31238615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 37344586 - 37344346
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  37344586 ttaaatctcgaatttttaccatttccatcaatttagtccttatacacgtggctgccttgttgacacgtgtacatgacaacacatcatgcaagaggacacg 37344487  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| ||||| |||||||||||||||||||    
T  37344486 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacgaat 37344387  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  37344386 ttgaccgattttttaaaattcaaggacgaatttgaggtatt 37344346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 6 - 240
Target Start/End: Complemental strand, 2869818 - 2869583
Alignment:
Q  6 tctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatc 104  Q
    |||| ||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||| | ||||| |||||    
T  2869818 tctcaaatttttactatttccatcaatttagtccttgtacatgtggctgccttgttgacacgtgtacaggacaacacatcatgcaagatgacacatcatc 2869719  T
Q  105 accactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggc 204  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||| |    
T  2869718 accactaacagagcttttggacggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacgaatttgac 2869619  T
Q  205 cgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||| |||||||||||||||||||||||||||    
T  2869618 cgatttttgaaaattcaaggacgaatttgaggtatt 2869583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 6 - 240
Target Start/End: Original strand, 50555982 - 50556217
Alignment:
Q  6 tctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatc 104  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| ||||||||| ||||||| | |||||| ||||    
T  50555982 tctcgaatttttaccatttccatcaaattagtccttgtacacgtgactcccttgttgacacgtgtacatgacaacacagcatgcaagatgacacgccatc 50556081  T
Q  105 accactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggc 204  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||| |    
T  50556082 accactaacggagcttttggacggagggaccattttgatagacgtctgtaaaatttagggactaaatagatatttcgcaaaattcagagacgaatttgac 50556181  T
Q  205 cgattttttaaaattcaaggacgaatttgaggtatt 240  Q
     ||||||||||||||||| |||||||||||| ||||    
T  50556182 tgattttttaaaattcaaagacgaatttgagatatt 50556217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 3013350 - 3013596
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||| |||| ||     
T  3013350 ttaaatctcaaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacggcatgcaagaggataca 3013449  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttg------atggacgtctgtaaaattcagggactaaatagatattttgcaaaattcaggg 193  Q
    ||||||||||||||||||||||||||||||||||| ||||||      |||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  3013450 tcatcaccactaacggagcttttggacggagggactattttgatgtccatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatgg 3013549  T
Q  194 acgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||||    
T  3013550 acgaatttgactgatgttttaaaattcaaggacgaatttgaggtatt 3013596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 15104685 - 15104481
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | |||||     
T  15104685 ttaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgccttattgacacgtgtacaagacaacacagcatgcaagaagacaca 15104586  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  15104585 tcatcaccactaatggagcttttggacggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaacgaat 15104486  T
Q  200 ttggc 204  Q
    |||||    
T  15104485 ttggc 15104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 33602524 - 33602764
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| || || ||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||| | | |||     
T  33602524 ttaaatctcgaattttgactatttccatcaatttagtccttgtacacatggctgacttgctgacacgtgtacaagacaacacaacatgcaagaagccaca 33602623  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||  ||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||||||||| | |||||||  |||||||||||||||||     
T  33602624 tcatcattactaacggaccttttggacggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacgaaa 33602723  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| ||||||||| |||||||||||||||||||||||||||    
T  33602724 ttgaccgatttttcaaaattcaaggacgaatttgaggtatt 33602764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 46583443 - 46583676
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| || ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||| ||||| | | ||||||| | | ||| |||||||    
T  46583443 tcgaattttgaccattttcatcaatttagtccttgtacacgtggctgacttgctgacacgtgtacatgacaagaaagcatgcaagaagccacatcatcac 46583542  T
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    || ||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||| || ||| |||    
T  46583543 cattaacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattgaccg 46583642  T
Q  207 attttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||||||||||||||||||||||||    
T  46583643 atttttcaaaattcaaggacgaatttgaggtatt 46583676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 15 - 240
Target Start/End: Original strand, 52643514 - 52643735
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||| ||||||||| |||||| ||||||||||| |||| ||||||||| ||||||| |||||||||| | |||| || |||| ||||||||||||||    
T  52643514 tttaccagttccatcaaattagtcattgtacacgtgactgcattgttgacatgtgtacaggacaacacaatacgcaagagaacacatcatcaccactaac 52643613  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
    ||||||||||||||||| |||||| |     ||||| | |||||||||||||||||||| |||||| |||||||||||||||||||||  | |||||||     
T  52643614 ggagcttttggacggagagaccatct-----gacgtttataaaattcagggactaaataaatatttcgcaaaattcagggacgaatttaactgattttta 52643708  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    |||||| ||||||||||||||||||||    
T  52643709 aaaatttaaggacgaatttgaggtatt 52643735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 92 - 239
Target Start/End: Original strand, 51896124 - 51896271
Alignment:
Q  92 aggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcag 191  Q
    ||||||| |||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  51896124 aggacacatcatcaccactaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcag 51896223  T
Q  192 ggacgaatttggccgattttttaaaattcaaggacgaatttgaggtat 239  Q
    |||| |||||| | |||||||||||||| ||||||| |||||||||||    
T  51896224 ggacaaatttgactgattttttaaaatttaaggacggatttgaggtat 51896271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 26225434 - 26225558
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    |||||| |||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| ||||||||    
T  26225434 ttaagtttcgaatttttaccatttccatcaatttagtccttgtacatgtggctgctttgttgacacgtgtacaagacaacacatcatgcaagggacacgt 26225533  T
Q  101 catcaccactaacggagcttttgga 125  Q
    ||||| || ||| ||||||||||||    
T  26225534 catcagcattaatggagcttttgga 26225558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 25278975 - 25279073
Alignment:
Q  142 atggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  25278975 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatt 25279073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 234
Target Start/End: Complemental strand, 51122121 - 51121915
Alignment:
Q  29 caatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttggacg 127  Q
    |||||||||||||||||||||| || |||| |||||||||||||| ||||||||||||||||  | | ||  ||| || ||||||| || ||||||||||    
T  51122121 caatttagtccttgtacacgtgacttcctttttgacacgtgtacatgacaacacaacatgcagggagccagctcaacatcactaacagaccttttggacg 51122022  T
Q  128 gagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacg 227  Q
    ||||||||||||||||||||||  |  |||||||||||| |||| ||||||||||||||||  || ||||  ||||| |||  ||  |||||||||||||    
T  51122021 gagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatttgggaacgatgttggctgatgcttgcaaattcaaggacg 51121922  T
Q  228 aatttga 234  Q
    || ||||    
T  51121921 aagttga 51121915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 42134700 - 42134492
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| ||| |||||| |||| ||| |||||||||||||||||||| ||||||  | |||| |||| ||   ||||||||||  |||||    
T  42134700 atcaaattagtccttgaacatgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggtgacatgtcaacatggctaacggagcacttgga 42134601  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    |||||||||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| ||||| || |||||||||    | ||||||||||||    
T  42134600 cggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgtaaaaattcaagga 42134501  T
Q  226 cgaatttga 234  Q
    |||||||||    
T  42134500 cgaatttga 42134492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 240
Target Start/End: Original strand, 9121642 - 9121788
Alignment:
Q  94 gacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcaggg 193  Q
    ||||| ||||||| | |||||||  ||||||||||||||||   ||||||||||||||| |||||||||||||||| | ||||||| | |||||| ||||    
T  9121642 gacacatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttaggg 9121741  T
Q  194 acgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  9121742 acgaaattggccgatttttcaaaattcaaggactattttgaggtatt 9121788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 31236908 - 31236823
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||| ||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  31236908 aaattcaggaactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaattcaaggacgaatttgaggtatt 31236823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 50554252 - 50554167
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  50554252 aaattcaggaactaaatagctattttacaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatt 50554167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 110 - 240
Target Start/End: Original strand, 47013072 - 47013202
Alignment:
Q  110 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatt 209  Q
    |||||||  ||||||||||||||||   |||||||||||| || |||||||||||||||| | ||||||| | |||||||||||||||| ||| ||||||    
T  47013072 taacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatt 47013171  T
Q  210 ttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| ||||||||||||| | |||||||||||    
T  47013172 tttcaaaattcaaggactattttgaggtatt 47013202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 8169568 - 8169653
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  8169568 aaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 8169653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 3011944 - 3011859
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||| |||||||||||||||| |||||||||||| ||||||||| | |||||||||||||| ||||||||||||||||||||    
T  3011944 aaattcagagactaaatagatatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaaggacgaatttgaggtatt 3011859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 26223676 - 26223591
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 26223591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 34776658 - 34776573
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 34776573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 46582099 - 46582014
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  46582099 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacaaatttgaggtatt 46582014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 52641969 - 52641892
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  52641969 ggactaaatatatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatt 52641892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 6816933 - 6816869
Alignment:
Q  176 attttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6816933 attttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatt 6816869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 45380890 - 45381066
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| |||||||||| |||| ||| |||||||||||||||||||| ||||||  | |||| |||| ||   ||||||||||  |||||    
T  45380890 atcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggcgacatgtcaccatggctaacggagcacttgga 45380989  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttg 202  Q
    |||||| ||| ||||||||||||||||  ||||||| | ||||| | ||||||| ||| |||| ||||| |||||||    
T  45380990 cggaggaacctttttgatggacgtctgacaaattcatgaactaagttgatatttcgcataattgagggatgaatttg 45381066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 8168029 - 8167946
Alignment:
Q  157 attcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||| | ||||||| ||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  8168029 attcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 8167946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 207
Target Start/End: Original strand, 36895403 - 36895597
Alignment:
Q  14 atttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaa 112  Q
    |||| ||| ||| ||||| || |||| || |||||||||| |||| ||| |||| ||||||||||||||||||||||| | ||||  ||| ||   ||||    
T  36895403 attttccaattcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaagacgacagatcagcatggctaa 36895502  T
Q  113 cggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||  ||||||| ||||||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| | ||||||| ||| ||||    
T  36895503 cggagcacttggacgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaagttgaccga 36895597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 207
Target Start/End: Original strand, 46638700 - 46638894
Alignment:
Q  14 atttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaa 112  Q
    |||| ||| ||| ||||| || |||| || |||||||||| |||| ||| |||| ||||||||||||||||||||||| | ||||  ||| ||   ||||    
T  46638700 attttccaattcaatcaaattcgtccctgaacacgtggcttcctttttgccacgcgtacaagacaacacaacatgcaaggcgacagatcagcatggctaa 46638799  T
Q  113 cggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||  ||||||||||||||| ||||| ||||||||||  ||||||| ||||||| | ||||||| ||| |||| ||||| ||| ||||||||    
T  46638800 cggagcacttggacggagggacctttttggtggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggatgaagttggccga 46638894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 25276831 - 25276746
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||| ||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  25276831 aaattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 25276746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 37088144 - 37088221
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||| |||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  37088144 ggacaaaatagctatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaaggaagaatttgaggtatt 37088221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 37345962 - 37346047
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||| ||| |||| |||||||| |||||||||||||||||||||||||||    
T  37345962 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttgaggtatt 37346047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 43868837 - 43868697
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagctt 120  Q
    |||||||||| || ||||||||||||||| || |||||| ||||||||||||||||||||  |||||||  | ||||  ||| || |||||||||||| |    
T  43868837 tttccatcaaattggtccttgtacacgtgacttccttgtagacacgtgtacaagacaacatgacatgcatgacgacaactcagcagcactaacggagcat 43868738  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattca 161  Q
    ||||||||| |||| ||||||||||| || ||| |||||||    
T  43868737 ttggacggaaggactattttgatggatgtttgttaaattca 43868697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 2871076 - 2871161
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||  ||| |||||| ||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  2871076 aaattcaaagacaaaatagctatttcgcaaaattcagggacgaatttagccgatttttaaaaattcaaggacgaatttgagatatt 2871161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 31801864 - 31801643
Alignment:
Q  14 atttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaa 112  Q
    |||| ||| ||| ||||| || |||| || ||||||| || |||| ||| |||| ||||||||||||||||||||||| | ||||  ||| ||   ||||    
T  31801864 attttccaattcaatcaaattcgtccctgaacacgtgacttccttcttgccacgcgtacaagacaacacaacatgcaagacgacaaatcagcatggctaa 31801765  T
Q  113 cggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttt 212  Q
    ||||||  ||||||||||||||| |||||||||||||||   ||||| | ||||||| | ||||||| ||| |||| ||||||||| ||| ||||  | |    
T  31801764 cggagcacttggacggagggacctttttgatggacgtctcacaaatttaaggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgt 31801665  T
Q  213 taaaattcaaggacgaatttga 234  Q
     |||||| | ||||||||||||    
T  31801664 gaaaatttagggacgaatttga 31801643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 51894656 - 51894571
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||| |||||| ||||||||||| ||| |||||| || ||||||||||||||||| |||||||||| |||||    
T  51894656 aaattcagggactaaatatatatttcgcaaaattcagagacaaatttgacccattttttaaaattcaagaacgaatttgatgtatt 51894571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 234
Target Start/End: Original strand, 18183846 - 18184057
Alignment:
Q  23 ttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgc-aaaggacacgtcatcaccactaacggagcttt 121  Q
    ||||||||| |||||||||| |||||||||| | || ||| ||||||||||||||||||||||||||   | ||||  ||| ||   ||||||||||  |    
T  18183846 ttccatcaaattagtccttgaacacgtggcttcttttttgccacgtgtacaagacaacacaacatgctggacgacaaatcagcatggctaacggagcact 18183945  T
Q  122 tggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattca 221  Q
    | || | ||||||  ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| ||||| || |||||||||    | ||||||||    
T  18183946 t-gatgaagggacatttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgaaccgtaaaaattca 18184044  T
Q  222 aggacgaatttga 234  Q
    | |||||||||||    
T  18184045 aagacgaatttga 18184057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 25278934 - 25278858
Alignment:
Q  164 gactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||| ||||||||||||||| |||||| | ||||||| |||||||||||| ||||||||||||||    
T  25278934 gactaaatagatatttcgcaaaattcagggacaaatttgactgatttttgaaaattcaaggatgaatttgaggtatt 25278858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 1444181 - 1444266
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||||| ||||||||||||| || ||||||||||||| |||||| |||||| | |||||||||||    
T  1444181 aaattcagggactaatttgatattttgaaaaattcagggacaaaattggccgatttttcaaaatttaaggactattttgaggtatt 1444266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 4854499 - 4854414
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||| ||| |||||||||||||||||| |||  |||||||| ||||||||||||||||||||| |||||    
T  4854499 aaattcagggactaatttgatctttcgcaaaattcagggacgaaattgaacgatttttcaaaattcaaggacgaatttgaagtatt 4854414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 9120128 - 9120043
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||||||||||| ||| ||||||||| ||||||||||||| | |||||||||||    
T  9120128 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtatt 9120043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 27089279 - 27089364
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||| ||| | |||||||  ||||||||| ||||||| || |||||||||| |||||||||||||||||||||||||||    
T  27089279 aaattcagggattaatttgatatttcacaaaattcaaggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 27089364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 207
Target Start/End: Complemental strand, 44157639 - 44157470
Alignment:
Q  39 cttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttggacggagggaccat 137  Q
    |||| |||||||||| |||| ||| |||||||||||||||||||||||||||  | |||| ||||  |   || |||||||  || |||||| ||||  |    
T  44157639 cttgaacacgtggcttccttcttgccacgtgtacaagacaacacaacatgcagggcgacatgtcactatggctgacggagcacttagacggaaggacttt 44157540  T
Q  138 tttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||| ||||||||||   ||||||||||||||| | ||||||||||| |||| ||||| ||||||||||||    
T  44157539 ttttatggacgtctaacaaattcagggactaagttgatattttgcataattgagggatgaatttggccga 44157470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 33599255 - 33599191
Alignment:
Q  176 attttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||| ||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  33599255 atttttcaaaattcaaggacgaatttgcccgatttttcaaaattcaaggacgaatttgaggtatt 33599191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 33599307 - 33599229
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttg 233  Q
    |||||||| || ||| | ||||||| |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||    
T  33599307 aaattcagagattaatttgatatttcgcaaaattcatggacgaatttgaccgatttttcaaaattcaaggacgaatttg 33599229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 47011545 - 47011460
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||| ||||||| ||| ||||||||| ||||||||||||| | |||||||||||    
T  47011545 aaattcagggactaatttgatatttcgaaaaattcatggacgaaattgtccgatttttcaaaattcaaggactattttgaggtatt 47011460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 27940826 - 27940650
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaagg-acacgtcatcaccactaacggagcttttgga 125  Q
    ||||| || |||| || |||||||||| |||| ||| |||| |||||||||| |||| ||||||| |  ||| |||| ||   ||||||||||   |  |    
T  27940826 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacatcatgcaaggttacatgtcagcatggctaacggagcccgttaa 27940727  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttg 202  Q
    |||||||||| ||||||||||||||||  ||||||| ||| ||||| ||||||| ||| |||| |||||||||||||    
T  27940726 cggagggacctttttgatggacgtctgataaattcaaggattaaattgatatttcgcataattgagggacgaatttg 27940650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 45045009 - 45044953
Alignment:
Q  184 aaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||| | || ||||||||||||||||||||||||||||||||||    
T  45045009 aaattcagggacgaattggaccaattttttaaaattcaaggacgaatttgaggtatt 45044953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 51896065 - 51896116
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggc 52  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  51896065 ttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtggc 51896116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 1442614 - 1442554
Alignment:
Q  180 tgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| | | |||||||||    
T  1442614 tgcaaaattcagggacgaaattggccgatttttcaaaattcaaggactattgtgaggtatt 1442554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 33685155 - 33685362
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| |||||||||| |||| ||| ||||||||||||||||| |||||||||  | ||||| ||  ||   ||||||||||  |||||    
T  33685155 atcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaactcaacatgcagggcgacacatcggcatggctaacggagcacttgga 33685254  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
     ||||||| | ||||||||||  | ||  |||||||  || ||||| ||||||| ||| |||| ||||| ||||||| ||||    | |||||||| |||    
T  33685255 tggagggatc-ttttgatggagatgtgacaaattcaatgattaaattgatatttcgcataattgagggatgaatttgaccgacccgtaaaaattcaggga 33685353  T
Q  226 cgaatttga 234  Q
    |||||||||    
T  33685354 cgaatttga 33685362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 35479976 - 35480089
Alignment:
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattc 220  Q
    ||||||||| ||||| ||||||||||||||||  |||||||  || ||| | ||||||| ||| |||| ||||| ||||||||| |||   | |||||||    
T  35479976 ttggacggaaggacctttttgatggacgtctgacaaattcatagattaagttgatatttcgcataattgagggatgaatttggctgatccgtgaaaattc 35480075  T
Q  221 aaggacgaatttga 234  Q
    ||||||||| ||||    
T  35480076 aaggacgaagttga 35480089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 5783566 - 5783502
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaaca 86  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| ||||||||||    
T  5783566 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacaaca 5783502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 1442655 - 1442594
Alignment:
Q  110 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaat 171  Q
    |||||||  ||||||||||||||||   ||||||||||||||| ||||||||||||| ||||    
T  1442655 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggacgaaat 1442594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 47269461 - 47269570
Alignment:
Q  125 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagg 224  Q
    ||||||||||| ||||||||||||| ||  |||||||||||  |||| || |||| | | |||| |||||| |||||||||||    | |||||||| ||    
T  47269461 acggagggacctttttgatggacgtttgacaaattcagggatgaaattgaaatttcgtataattgagggactaatttggccgacgcgtgaaaattcaggg 47269560  T
Q  225 acgaatttga 234  Q
    ||||||||||    
T  47269561 acgaatttga 47269570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 27952502 - 27952554
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||||||||||||    
T  27952502 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 27952554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 35478176 - 35478124
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||    
T  35478176 aaattcagggattaaattgatattttgcataattgagggactaatttggccga 35478124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 6575408 - 6575345
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca 90  Q
    ||||| |||||||||| |||||||||| |||| ||| |||| ||||||||||||| | ||||||    
T  6575408 atcaaattagtccttgaacacgtggcttccttcttgccacgcgtacaagacaacaaagcatgca 6575345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 44159296 - 44159375
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
    ||||||||| | ||||| ||||||||||| |||| ||||||||| ||| ||||| | | |||||||| ||||||| ||||    
T  44159296 aaattcaggaattaaattgatattttgcataattaagggacgaaattgaccgatctgtgaaaattcagggacgaagttga 44159375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 1442717 - 1442671
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctg 54  Q
    |||||| || || |||||||||| |||||||||||||||||||||||    
T  1442717 tcgaattttgacaatttccatcagtttagtccttgtacacgtggctg 1442671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 5783501 - 5783440
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggacta 168  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||    
T  5783501 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggacta 5783440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 51544275 - 51544210
Alignment:
Q  104 caccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 169  Q
    ||||||||||||| | ||||||||||  ||||| |||||| ||| | ||| |||||||||||||||    
T  51544275 caccactaacggaccatttggacggaatgaccaatttgattgacatttgttaaattcagggactaa 51544210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 18064760 - 18064824
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaaca 86  Q
    |||||||||| || ||| |||||||||||||| | | | | |||||||||||| |||||||||||    
T  18064760 tttccatcaaattggtcattgtacacgtggctccatagataacacgtgtacaacacaacacaaca 18064824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 16763319 - 16763080
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  16763319 ttaagtctcgaatttttaccattttcatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaaacaacatgcaagggacacgt 16763220  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16763219 catcgccactaacagagattttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 16763120  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    || ||||||||| |||||||||||||||||||||||||||    
T  16763119 tgaccgatttttaaaaattcaaggacgaatttgaggtatt 16763080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 6 - 240
Target Start/End: Original strand, 39664653 - 39664888
Alignment:
Q  6 tctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatc 104  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |  |||| ||||||| |||||    
T  39664653 tctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacagctagcaagaggacacatcatc 39664752  T
Q  105 accactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  39664753 accactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacgaatttggc 39664852  T
Q  205 cgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||||||||||||    
T  39664853 cgattttttaaaattcaaggacgaatttgaggtatt 39664888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 17696450 - 17696210
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | |||||     
T  17696450 ttaaatctcgaatttttaccatttccatcaatttagtccttgtacacatggctgccttgttgacacgtgtacaggacaacacaacatgcaagatgacaca 17696351  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  17696350 tcatcaccactaacggagcttttggacggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatgaat 17696251  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  17696250 ttggccgatttttgaaaattcaaggacgaatttgaggtatt 17696210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 6 - 240
Target Start/End: Original strand, 19908151 - 19908387
Alignment:
Q  6 tctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatc 104  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  19908151 tctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgacaacacagcatgcaagaggacacgtcatc 19908250  T
Q  105 accactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggc 204  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  19908251 accactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggc 19908350  T
Q  205 cga-ttttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| |||||||||||||||||||||||||||||||||    
T  19908351 cgatttttttaaaattcaaggacgaatttgaggtatt 19908387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 15 - 240
Target Start/End: Original strand, 44709659 - 44709885
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  44709659 tttaccatttccatcaatttagtccttgtacacgtggatgtcttgttgacacgtgtacaagacaacacaacatgcaagaggacatatcatcaccactaac 44709758  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||||    
T  44709759 gaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcagggccgaatttggccggtttttt 44709858  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||||||||    
T  44709859 aaaattcaaggacgaatttgaggtatt 44709885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 14388984 - 14389224
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||     
T  14388984 ttaaatctcgaatttttaccatttccatcaagttagtccttgtacacgtggctgccttattgacacgtgtacaagacaacacaacatgcaagaggacaca 14389083  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||| |||||||||||||||||||    
T  14389084 tcatcactactaacgaaacttttggacggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 14389183  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  14389184 ttggccgatttttgaaaattcaatgacgaatttgaggtatt 14389224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 40560467 - 40560227
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||     
T  40560467 ttaaatcttgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgcgtacatgacaacacagcatgcaagaggacaca 40560368  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40560367 tcatcaccactaacagaacttttggacggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 40560268  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||| ||||||||||||||||| ||||||||||| |||||    
T  40560267 ttggctgattttttaaaattcaaagacgaatttgaagtatt 40560227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 42519105 - 42519348
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| ||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||||     
T  42519105 ttaaatcttgaatttttaccatttccatcaatttagtccttgtacacgtgactgccttgttgacacgtgtacaggacaacacagcatgcaagaggacaca 42519204  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgc-aaaattcagggacgaa 198  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||    
T  42519205 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaaattcaaggactaa 42519304  T
Q  199 tttggccgattttttaaaattcaaggacgaatttgaggtatttg 242  Q
    ||||  | ||||||||||||||||||||||||||||||||||||    
T  42519305 tttgatcaattttttaaaattcaaggacgaatttgaggtatttg 42519348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 2767178 - 2766938
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||| ||||||||||||||| ||| |||||||||| |||||||||| ||||||||||| ||||||||||||| ||| |||||||     
T  2767178 ttaaatctcgaatttttactatttccatcaatttaatccatgtacacgtgactgccttgttaacacgtgtacaggacaacacaacatacaagaggacaca 2767079  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||| |    
T  2767078 tcatcaccactaacggagcttttggacagagggaccattttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgagt 2766979  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| ||||||||| |||||||||||||||||||||| ||||    
T  2766978 ttgaccgatttttaaaaattcaaggacgaatttgagctatt 2766938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 39455413 - 39455173
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||||||||||||||||| ||| |||     
T  39455413 ttaaatctcgaatttttaccatttccatcaatttagtccttgtgcacgagggtgccttgttgacacgtgtacatgacaacacaacatgcaagagggcaca 39455314  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||    
T  39455313 tcatcgccactaacggagcttttgaacggagagaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaggactgaat 39455214  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||  ||||||||||||||||||||||| |||||||| ||||    
T  39455213 ttaaccgattttttaaaattcaaggacaaatttgagatatt 39455173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 6797751 - 6797511
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||     
T  6797751 ttaaatctcgaatttttaccattttcatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacatcatgcaagaggataca 6797652  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||  |||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||    
T  6797651 tcatcacccgtaacagagcttttggacggaggaaccattttgatagacgtctgtaaaattaagggactaaatagatatttcgcaaaattcaggaacgaat 6797552  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    || ||| ||||||||||||||||  | |||||| |||||||    
T  6797551 ttagccaattttttaaaattcaaatatgaatttaaggtatt 6797511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 78 - 208
Target Start/End: Original strand, 16377174 - 16377305
Alignment:
Q  78 aacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagata 176  Q
    |||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  16377174 aacacagcatgcaagagaacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagata 16377273  T
Q  177 ttttgcaaaattcagggacgaatttggccgat 208  Q
    ||||||||||||||||||| |||||| |||||    
T  16377274 ttttgcaaaattcagggacaaatttgaccgat 16377305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 37645717 - 37645491
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    |||||||||||||| || || |||||||||||||||| || |||||||||||||||||| ||||||||| ||| ||| | ||||| |||||| || ||||    
T  37645717 tttaccatttccattaaattggtccttgtacacgtggttgtcttgttgacacgtgtacaggacaacacagcatacaagatgacacatcatcatcaataac 37645618  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
     |||||| ||||||||||||| ||||||||  || |||| |||||||| |||||||||||||||||   |||||| | ||||||||| | | |||||||     
T  37645617 agagcttatggacggagggacaattttgataaacatctgcaaaattcaaggactaaatagatatttcctaaaatttaaggacgaattcgactgattttta 37645518  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||| ||| ||||||    
T  37645517 aaaattcaaggacgaagttggggtatt 37645491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 234
Target Start/End: Complemental strand, 17946317 - 17946104
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagctt 120  Q
    ||||||||||||||||||||||||||||| || |||| |||||| ||||||| ||||||||||||| ||  | | ||  | | || |||||||||| |||    
T  17946317 tttccatcaatttagtccttgtacacgtgacttcctttttgacatgtgtacatgacaacacaacatacagggagccagcttagcatcactaacggacctt 17946218  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattc 220  Q
    ||||||||||||||||||||||||||| |  |  |||||||||||| |||| |||||||||||||||| | |||||| ||| || |||  ||  ||||||    
T  17946217 ttggacggagggaccattttgatggacatgagagaaattcagggacaaaattgatattttgcaaaatttaaggacgattttagctgatgcttgcaaattc 17946118  T
Q  221 aaggacgaatttga 234  Q
    | ||||||| ||||    
T  17946117 agggacgaagttga 17946104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 240
Target Start/End: Original strand, 24208061 - 24208182
Alignment:
Q  119 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaat 218  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||| | ||||||| | | |||||||||||||| ||||||||||||| |||||    
T  24208061 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaat 24208160  T
Q  219 tcaaggacgaatttgaggtatt 240  Q
    |||||||  | |||||||||||    
T  24208161 tcaaggagtattttgaggtatt 24208182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 39663243 - 39663158
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  39663243 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaattttaggtatt 39663158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 19906764 - 19906686
Alignment:
Q  162 gggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  19906764 gggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttaaggtatt 19906686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 230
Target Start/End: Complemental strand, 37417485 - 37417287
Alignment:
Q  33 ttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaagga-cacgtcatcaccactaacggagcttttggacggagg 131  Q
    |||||||||| |||||||||| |||| ||| |||||||||||||||||||| ||||||  | | ||  ||| ||   ||||||||||  ||||||| |||    
T  37417485 ttagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggcaacagatcagcatggctaacggagcacttggacgaagg 37417386  T
Q  132 gaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaat 230  Q
    |||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| ||||| ||||||||||||    | |||||||||||||||||    
T  37417385 gacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccatgaaaattcaaggacgaat 37417287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 240
Target Start/End: Original strand, 6786000 - 6786121
Alignment:
Q  119 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaat 218  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||| | |||||||   | |||| ||||||||| ||||||||||||| |||||    
T  6786000 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacgaaattggccgatttttcaaaat 6786099  T
Q  219 tcaaggacgaatttgaggtatt 240  Q
    |||||||| | |||||||||||    
T  6786100 tcaaggactattttgaggtatt 6786121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 16376825 - 16376740
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  16376825 aaattcagggactaaatagctatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaagacgaatttgaggtatt 16376740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 7744262 - 7744099
Alignment:
Q  26 catcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggac-acgtcatcaccactaacggagcttttgg 124  Q
    ||||||||||||| |||||||||||||| |||| |||||| ||||||| ||||||||||||| || ||  | |  ||| || |||||||||| |||||||    
T  7744262 catcaatttagtcattgtacacgtggcttcctttttgacatgtgtacatgacaacacaacatacagagagctaactcagcatcactaacggaccttttgg 7744163  T
Q  125 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 188  Q
    | ||||||||||||||||||||| |  |  |||||||||||| |||| ||||||| ||||||||    
T  7744162 atggagggaccattttgatggacatgagagaaattcagggacgaaattgatatttcgcaaaatt 7744099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 240
Target Start/End: Complemental strand, 37020658 - 37020512
Alignment:
Q  94 gacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcaggg 193  Q
    ||||| ||||||| | |||||||  ||||||||||||||||   ||||||||||||||| |||||||||||||||| | |||||||   |||||||| ||    
T  37020658 gacacatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcaaaaaattcaagg 37020559  T
Q  194 acgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    || || ||| ||||||||| ||||||||||||| | |||||||||||    
T  37020558 acaaaattgaccgatttttcaaaattcaaggactattttgaggtatt 37020512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 14387438 - 14387353
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  14387438 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 14387353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 16764611 - 16764696
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  16764611 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttgaggtatt 16764696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 207
Target Start/End: Original strand, 29909566 - 29909747
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||||||||||| | ||||  ||| ||   ||||| ||||  |||||    
T  29909566 atcaaattagtcccttaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaacgcgacagatcaacatggctaacagagcacttgga 29909665  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    |||||||||| ||||||||||||||||  ||||| ||||||||||| ||||||| ||| |||| |||||| || ||||||||    
T  29909666 cggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataattgagggacaaagttggccga 29909747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 25619878 - 25619670
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| ||| |||||| | || ||| |||||||| |||||||| ||||||||| || ||||  ||| ||   ||||||||||  |||||    
T  25619878 atcaaattagtccttgaacatgtggcttctttcttgccacgtgtataagacaacgcaacatgcagagcgacagatcaacatggctaacggagcacttgga 25619779  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
     ||||||||| ||||||||||| | ||  ||||||||||||||| | ||||||||||| |||| ||||| ||||||| ||||    | ||||||||||||    
T  25619778 tggagggacctttttgatggacatatgacaaattcagggactaagttgatattttgcataattgagggatgaatttgaccgacccataaaaattcaagga 25619679  T
Q  226 cgaatttga 234  Q
    |||||||||    
T  25619678 cgaatttga 25619670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 10716802 - 10716873
Alignment:
Q  20 catttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa 91  Q
    |||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10716802 catttccatcaaattggtccttgtacacgtggcttccttgttgacacgtgtacaagacaacacaacatgcaa 10716873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 19581520 - 19581418
Alignment:
Q  138 tttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggt 237  Q
    |||||||||| | ||  ||||||  ||||||||||||||||| ||||||||||||||| |||||||| ||||||| |||||| |||||||||||||||||    
T  19581520 tttgatggacatttggtaaattcgaggactaaatagatatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatttgaggt 19581421  T
Q  238 att 240  Q
    |||    
T  19581420 att 19581418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 207
Target Start/End: Complemental strand, 15372717 - 15372536
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| || |||| || |||||||||| |||| ||| |||| |||||||||| |||||||||||| | |||| || | ||   ||||||||||   |  |    
T  15372717 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgttagcatggctaacggagcccgttaa 15372618  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    |||||||||| ||||||||||||||||  ||||||||||| ||||| ||||||||||| |||| |||| |||||||||||||    
T  15372617 cggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcataattgaggggcgaatttggccga 15372536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 34400403 - 34400318
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| |||| |||||| ||||| |||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||    
T  34400403 aaattcaaggacaaaatagctatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgaggtatt 34400318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 39456780 - 39456865
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||  || ||||||||||||||||||| |||||||| |||||    
T  39456780 aaattcagggactaaatagctattttgcaaaattcatggacgaatttaaccaattttttaaaattcaaggatgaatttgaagtatt 39456865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 234
Target Start/End: Complemental strand, 361654 - 361455
Alignment:
Q  36 gtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagcttttggacggagggac 134  Q
    ||||||||||||||||||| |||| ||||| |||||||| ||| |||||||||||  | ||||| ||||||||| |||| ||  | |||||| |||||||    
T  361654 gtccttgtacacgtggctgacttgatgacatgtgtacaacacatcacaacatgcaggaagacacctcatcaccattaacagatatattggacagagggac 361555  T
Q  135 cattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
     |  ||||||||||||||   ||||||  |||||| | |||||||  || |||| ||||| || |||||||||||  | |||||||||||||||| ||||    
T  361554 taaattgatggacgtctgacgaattcaatgactaatttgatatttcacataattgagggatgattttggccgattcatgaaaattcaaggacgaagttga 361455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 62720 - 62866
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctg-ccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagct 119  Q
    |||||||||| || ||| ||||||||||||||  ||||||||||||||||||||| |||||  |||||||  | ||||  ||| || ||||| ||||||     
T  62720 tttccatcaaattggtcattgtacacgtggctttccttgttgacacgtgtacaaggcaacatgacatgcatgacgacaactcagcagcactagcggagca 62819  T
Q  120 tttggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    |||||||||| |||| |||||||||||||| ||| ||||||||||||    
T  62820 tttggacggaaggactattttgatggacgtttgttaaattcagggac 62866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 6783453 - 6783368
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||||| | |||||||||||||| ||| ||||||||||||||||||||||| | |||||||||||    
T  6783453 aaattcagggactaatttgatattttgaataattcagggacgaaattgaccgattttttaaaattcaaggactattttgaggtatt 6783368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 6799408 - 6799493
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| |||| |||||| ||||| |||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  6799408 aaattcaaggacaaaatagctatttggcaaaattcatggacgaatttgtccgatttttaaaaattcaaggacgaatttgagatatt 6799493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 207
Target Start/End: Complemental strand, 15432546 - 15432365
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| |||| || || |||| ||| |||||||||||||||||||||||||||  | |||| |||| ||  |||||  ||||  |||||    
T  15432546 atcaaattagtccttgaacacatgacttccttcttgccacgtgtacaagacaacacaacatgcagggcgacatgtcagcatgactaatagagcacttgga 15432447  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    || | | ||| ||||||||||||||||  |||||||| |||||||| ||||||| ||| |||| ||||| ||||||| ||||    
T  15432446 cgaatgaacctttttgatggacgtctgacaaattcagagactaaattgatatttcgcataattgagggatgaatttgaccga 15432365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 24205687 - 24205602
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||||||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  24205687 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatt 24205602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 11315258 - 11315324
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatg 88  Q
    |||||||||| || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  11315258 tttccatcaaattggtccttgtacatgtggcttccttgttgacacgtgtacaagacaacacaacatg 11315324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 37022185 - 37022270
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||||||||||| |||| |||||||| ||||||||||||| | |||||||||||    
T  37022185 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggtcgatttttcaaaattcaaggactattttgaggtatt 37022270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 40561878 - 40561963
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | | |||||  |||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  40561878 aaattcagggactaatttgctatttcacaaaattcagagacgaaattggccgatttttcaaaattcaaagacgaatttgaggtatt 40561963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 11315335 - 11315449
Alignment:
Q  120 tttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaatt 219  Q
    |||||||||||||||||||||||||||||||||  ||||||||| ||||  | ||||||| |  |||||  || ||||||||||||||||  | ||||||    
T  11315335 tttggacggagggaccattttgatggacgtctgacaaattcaggaactattttgatatttcgttaaattagggaacgaatttggccgattcataaaaatt 11315434  T
Q  220 caaggacgaatttga 234  Q
     ||||||||| ||||    
T  11315435 taaggacgaagttga 11315449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 40097767 - 40097629
Alignment:
Q  26 catcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttgg 124  Q
    |||||| ||||| ||||||||||||||| |||||||||||||| || |||||||||| |||||||| | ||||  ||| || ||||||  |||| |||||    
T  40097767 catcaaattagttcttgtacacgtggcttccttgttgacacgtatataagacaacacgacatgcaagacgacaactcagcagcactaatagagcatttgg 40097668  T
Q  125 acggagggaccattttgatggacgtctgtaaaattcagg 163  Q
    | |||  | ||||||| |||||||| ||| |||||||||    
T  40097667 atggaatggccattttaatggacgtttgttaaattcagg 40097629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 862213 - 862354
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagctt 120  Q
    |||| ||||| || |||||||||||| ||||| |||||| ||||||||||||||||||||   ||||||  | ||||  ||| || |||||||||||| |    
T  862213 tttcaatcaaattggtccttgtacacatggcttccttgtagacacgtgtacaagacaacaagccatgcaggaagacaactcaacagcactaacggagcat 862312  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcag 162  Q
    ||||||||| |||| |||||||| ||||| | | ||||||||    
T  862313 ttggacggaaggactattttgattgacgtttattaaattcag 862354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 2577480 - 2577565
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | |||||||   |||||||||||||||| |||| |||||||| ||||||||||||| | |||||||||||    
T  2577480 aaattcagggactaatttgatatttcaaaaaattcagggacgaaattggacgatttttcaaaattcaaggactattttgaggtatt 2577565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 26584718 - 26584930
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagctt 120  Q
    |||||||||| || ||| ||||||||||||||| || | ||| ||||| |||  |||||||||||||||  | ||||||||| |  ||||| | |||       
T  26584718 tttccatcaaattcgtcattgtacacgtggctgactggatgatacgtggacatcacaacacaacatgcaggacgacacgtcagcctcactaccagaggga 26584817  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattc 220  Q
     ||||||||||||  | |||||||||||||| | ||||| ||||| ||| | ||||||||| ||| || |||||||||||||||  ||  |   ||||||    
T  26584818 atggacggagggatgaatttgatggacgtctattaaattgagggattaatttgatattttgaaaacttgagggacgaatttggctaatcctagtaaattc 26584917  T
Q  221 aaggacgaatttg 233  Q
    |||||||||||||    
T  26584918 aaggacgaatttg 26584930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 39290 - 39465
Alignment:
Q  14 atttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaa 112  Q
    |||| ||| ||| ||||| || |||| || |||||||||| |||| ||| |||| ||||||||||||||| ||||||| | ||||  ||| ||   ||||    
T  39290 attttccaattcaatcaaatttgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacatatcagcatggctaa 39389  T
Q  113 cggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 188  Q
    |||| |  |||||||| |||||| |||||||| |||||||  ||||||||||||||| | ||||||| ||| ||||    
T  39390 cggaacacttggacggggggacctttttgatgaacgtctgacaaattcagggactaagttgatatttcgcataatt 39465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 234
Target Start/End: Complemental strand, 42879556 - 42879366
Alignment:
Q  44 acacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttggacggagggaccattttga 142  Q
    ||||||| || |||| ||| |||||||||||||||||||| ||||||  | ||||  ||| ||  ||||||||| |  ||||||||||||||| ||||||    
T  42879556 acacgtgacttccttcttgtcacgtgtacaagacaacacagcatgcagggcgacatatcagcatgactaacggaacacttggacggagggacctttttga 42879457  T
Q  143 tggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
    ||||||||||  |||||||  |||||| | ||| ||| ||| |||| ||||| ||||||| ||||    | |||||| ||||||||||||||    
T  42879456 tggacgtctgacaaattcatagactaagttgat-tttcgcataattaagggatgaatttgaccgacccgtaaaaatttaaggacgaatttga 42879366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 39679 - 39593
Alignment:
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||||||| |||| || |||| |||  ||||||||||| ||||| ||||||| ||| |||| ||||||||||||||||||    
T  39679 ttggacggagggacctttttaatcgacgcctgataaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 39593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 207
Target Start/End: Complemental strand, 41706757 - 41706576
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| || |||| || ||||||| || |||| ||| |||| |||||||||| |||| ||||||| | |||| |||| ||   ||||||||||   |  |    
T  41706757 atcaaattcgtccctgaacacgtgacttccttcttgccacgcgtacaagacagcacagcatgcaaggcgacatgtcagcatggctaacggagcccgttaa 41706658  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    |||||||||| |||||||||||||  |  ||||||||||| ||||| ||||||| ||| |||| ||||||||||||| ||||    
T  41706657 cggagggacctttttgatggacgttcgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccga 41706576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 31475079 - 31475165
Alignment:
Q  154 aaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||| |||||||||||||  |||||||  | |||||||||| | ||||||| |||||| ||| ||||| ||||||||||    
T  31475079 aaaattcagggattaaatagatatttctcaaaatttggtgacgaatttgactgatttttgaaaattaaagaacgaagttgaggtatt 31475165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 37646477 - 37646563
Alignment:
Q  154 aaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||||||| ||| ||||   ||||||||||| | ||||||| ||| |||||| ||||| ||| ||||||    
T  37646477 aaaattcagggactaaatagatatttcgcagaatttgaggacgaatttgactgatttttgaaagttcaagaacgaagttggggtatt 37646563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 42517602 - 42517562
Alignment:
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  42517602 ttggccgatttttaaaaattcaaggacgaatttgaggtatt 42517562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 15807861 - 15807968
Alignment:
Q  63 acacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattca 161  Q
    |||||||||||||||||||   ||||||  | ||||  ||| |||||||||||| || |||||||||| |||| | |||||| ||||| ||| |||||||    
T  15807861 acacgtgtacaagacaacaagtcatgcaggaagacaactcagcaccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattca 15807960  T
Q  162 gggactaa 169  Q
    ||||||||    
T  15807961 gggactaa 15807968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 32608009 - 32608116
Alignment:
Q  63 acacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattca 161  Q
    |||||||||||||||||||   ||||||  | ||||  ||| |||||||||||| || |||||||||| |||| | |||||| ||||| ||| |||||||    
T  32608009 acacgtgtacaagacaacaagccatgcaggaagacaactcagcaccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattca 32608108  T
Q  162 gggactaa 169  Q
    ||||||||    
T  32608109 gggactaa 32608116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 162074 - 162159
Alignment:
Q  154 aaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||| | ||||||||||||||||| ||||||  ||| |||||||| | ||||||| ||||||||| |||||| |||| |||||    
T  162074 aaaattcaagaactaaatagatattttgtaaaatttggggtcgaatttgactgatttttgaaaattcaa-gacgaaattgaagtatt 162159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 24207999 - 24208045
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctg 54  Q
    |||||| || ||||||||||||| |||||||||||||||||||||||    
T  24207999 tcgaattttgaccatttccatcagtttagtccttgtacacgtggctg 24208045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 11022935 - 11022996
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| |||||||    
T  11022935 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacaca 11022996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 28246865 - 28246804
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| |||||||    
T  28246865 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacaca 28246804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 41144 - 41196
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||||||||||||    
T  41144 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 41196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 11023000 - 11023100
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    |||||||||| |||||||||||||||||    ||||||||||||    ||||||||||||||  | ||||||| |  |||||  ||||||||||||||||    
T  11023000 cactaacggaccttttggacggagggacggaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggggacgaatttggccg 11023099  T
Q  207 a 207  Q
    |    
T  11023100 a 11023100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 38148698 - 38148634
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaaca 86  Q
    |||||||||||||||||| ||||||||||||| |||| ||   ||||||||||| ||| ||||||    
T  38148698 tttccatcaatttagtccctgtacacgtggcttcctttttccgacgtgtacaagccaatacaaca 38148634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 41708432 - 41708484
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||||||||||||    
T  41708432 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 41708484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 42001844 - 42001764
Alignment:
Q  10 gaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca 90  Q
    |||| ||| ||| ||| ||||| | |||||||| ||||||| || |||| ||| ||||||||||||||||| |||||||||    
T  42001844 gaattttttccaattcaatcaaatcagtccttgaacacgtgacttccttcttgtcacgtgtacaagacaactcaacatgca 42001764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 10716893 - 10716963
Alignment:
Q  132 gaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttg 202  Q
    ||||||||||||||||||||| |||||| | ||||||  | |||||||||  |||||  ||||||||||||    
T  10716893 gaccattttgatggacgtctgaaaaatttaaggactattttgatattttgttaaattatgggacgaatttg 10716963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 13999944 - 13999890
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattca 161  Q
    |||||| ||||| |||||||||| |||| |||||||||||||| ||| |||||||    
T  13999944 cactaatggagcatttggacggaaggactattttgatggacgtttgttaaattca 13999890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 37020704 - 37020658
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctg 54  Q
    |||||| || || |||||||||| |||||||||||||||||||||||    
T  37020704 tcgaattttgacaatttccatcagtttagtccttgtacacgtggctg 37020658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 4416866 - 4416926
Alignment:
Q  22 tttccatcaatttagtccttgtacacgt-ggctgccttgttgacacgtgtacaagacaaca 81  Q
    |||||||||| || |||||||||||||| || |  |||||||||| |||||||||||||||    
T  4416866 tttccatcaaattggtccttgtacacgtgggttttcttgttgacatgtgtacaagacaaca 4416926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 6785939 - 6785975
Alignment:
Q  18 accatttccatcaatttagtccttgtacacgtggctg 54  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  6785939 accatttccatcagtttagtccttgtatacgtggctg 6785975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 11021622 - 11021570
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||| ||||||||    
T  11021622 aaattcagggattaaattgatatttcgcataattgagggacgaagttggccga 11021570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 28246800 - 28246700
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    |||||||||| ||||||||| ||||||| |  ||||||||||||    ||||||||| ||||  | ||||||| |  |||||  ||||||||||||||||    
T  28246800 cactaacggaccttttggacagagggacgaaattgatggacgtcaaacaaattcaggaactattttgatatttcgttaaatttggggacgaatttggccg 28246701  T
Q  207 a 207  Q
    |    
T  28246700 a 28246700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 28248177 - 28248229
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||| ||||||||    
T  28248177 aaattcagggattaaattgatatttcgcataattgagggacgaagttggccga 28248229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 86)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 240
Target Start/End: Original strand, 39859114 - 39859349
Alignment:
Q  6 tctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatc 104  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  39859114 tctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgacaacacagcatgcaagaggacacgtcatc 39859213  T
Q  105 accactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggc 204  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  39859214 accactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggc 39859313  T
Q  205 cgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||||||||||||||    
T  39859314 cgattttttaaaattcaaggacgaatttgaggtatt 39859349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 6 - 240
Target Start/End: Complemental strand, 6602574 - 6602339
Alignment:
Q  6 tctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaa-ggacacgtcatc 104  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||| ||||| ||||||    
T  6602574 tctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgcctggttgacacgtgtacatgacaacacagcatgcaaaaggacatgtcatc 6602475  T
Q  105 accactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | ||| ||    
T  6602474 accactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggataagtttagc 6602375  T
Q  205 cgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||| |||||||||| ||||    
T  6602374 cgattttttaaaattcaaggtcgaatttgagttatt 6602339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 24228289 - 24228529
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||| ||| ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||     
T  24228289 ttaaatctcaaatttttacaatttccatcaatttagtcttcgtacacgtggctgccttgttgacacgtgtatatgacaacacaacatgcaagaggacaca 24228388  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  24228389 tcatcaccactaatggagcttttggacgaagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacgaat 24228488  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| ||||||||||||||||| ||||| ||||||||||    
T  24228489 ttggccaattttttaaaattcaagaacgaaattgaggtatt 24228529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 34776802 - 34777035
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| ||||||||||||||||| ||||| |||||||| |||| |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||     
T  34776802 tcgaatttttaccatttccatcaaattagttcttgtacatgtggttgccttgttggcacgtgtacatgacaacacaacatgcaagaggacacgtcatcat 34776901  T
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||     
T  34776902 cactaacggagtttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaatgaatttggcca 34777001  T
Q  207 attttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||| ||| ||||||||||||||||    
T  34777002 attttttaaaatttaagaacgaatttgaggtatt 34777035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 30940305 - 30940545
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||     
T  30940305 ttaaatctcgaatttttacaatttccatcaatttagtccttgtacacgtggctgccttgttgacatgtgtacaggacaacacagcatgcaataggacaca 30940404  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||| || |||||||    
T  30940405 tcatcaccactaacggagcttttggacggagagaccattttgatgaacgtttgtaaaattcagggactaaatagatatttcgtaaaattaagagacgaat 30940504  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||||| || ||||| |||||||    
T  30940505 ttggccgattttttaaaattcaagaacaaatttaaggtatt 30940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 6 - 240
Target Start/End: Complemental strand, 45359575 - 45359340
Alignment:
Q  6 tctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatc 104  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||||| ||||||||| ||||||| |||||||||||||    
T  45359575 tctcgaatttttaccatttccatcaaattagtccttgtacacgtgactgcctttttgaaacgtgtacatgacaacacagcatgcaagaggacacgtcatc 45359476  T
Q  105 accactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggc 204  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||| ||||| |    
T  45359475 accactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcaaggacggatttgac 45359376  T
Q  205 cgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||| |||| ||||| |||||||    
T  45359375 cgattttttaaaattcatggacaaatttaaggtatt 45359340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 47386089 - 47386329
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| || ||||     
T  47386089 ttaaatctcgaatttttacaatttccatcaatttagtccttgtacacgtggctgccttgttgacacttgtacaggacaacacatcatgcaagagaacaca 47386188  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| || ||||||||| |||||| |||||||||| ||||||||    
T  47386189 tcatcaccactaacggagcttttggacggaatgaccattttgatggacgtctgtaaaatttagagactaaataaatatttcgcaaaattcaaggacgaat 47386288  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| | |||||||||||||| ||||||||||||||||||||    
T  47386289 ttgactgattttttaaaattaaaggacgaatttgaggtatt 47386329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 13168362 - 13168142
Alignment:
Q  6 tctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatc 104  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| ||||||||| ||||||| | |||||||||||    
T  13168362 tctcgaatttttaccatttccatcaaattagtccttgtacacgtgtctgtcttgttgacacgtgtacatgacaacacagcatgcaagatgacacgtcatc 13168263  T
Q  105 accactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattc---agggactaaatagatattttgcaaaattcagggacgaattt 201  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||| ||||||||||    
T  13168262 accactaacggagcttttggacggatggaccattttgatggacgtctgtaaaattcaggagggactaaatagatatttcgcaaaattcaaggacgaattt 13168163  T
Q  202 ggccgattttttaaaattcaa 222  Q
    |||||||||||||||||||||    
T  13168162 ggccgattttttaaaattcaa 13168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 38474023 - 38474263
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| ||| |||| ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| ||||||||| ||| ||| |||||||     
T  38474023 ttaaatcttgaatttttaccatttccatcaattcagtccttgcacacgtggctgtcttgttgacacgtgtacaggacaacacagcatacaagaggacaca 38474122  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  38474123 tcatcaccactaacggagcttttggacggatggaccattttgataggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacgaat 38474222  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| ||||||||| ||||||| ||||| |||||||||||||    
T  38474223 ttgaccgatttttaaaaattcgaggactaatttgaggtatt 38474263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 35693250 - 35693454
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||     
T  35693250 ttaaatctcgaatctttaccattttcatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacactacatgcaagaggacaca 35693349  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa--atagatattttgcaaaattcagggacga 197  Q
    |||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||  |||||||||| ||||||    
T  35693350 tcatcaccactaacagaacttttggatggagggaccattttgatggacgtctgtaaaattcagggactaattagagatattccgcaaaattcaaggacga 35693449  T
Q  198 atttg 202  Q
    |||||    
T  35693450 atttg 35693454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 37115420 - 37115646
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||               ||||||| |||||||     
T  37115420 ttaaatctcgaatttttaccattttcattaatatagtccttgtacacgtggctgccttgttgacacgtgg--------------catgcaagaggacaca 37115505  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  37115506 tcatcaccactaacggagcttttggacggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgcaaaattcaggaacgaat 37115605  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| | ||||||||||||||||| |||||||||||||||||    
T  37115606 ttgactgattttttaaaattcaatgacgaatttgaggtatt 37115646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 27665952 - 27666185
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| || || |||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| | ||||||| | | ||| |||||||    
T  27665952 tcgaattttgacaatttccatcaatttagtccttgtacacgtggctgacttgctgacacgtgtacaggacaacaaagcatgcaagaagccacatcatcac 27666051  T
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
     | ||||||  |||||||||||||||||   |||||||||||| ||||||||||||||||||| | ||||||| |||||||||||||||||| |||||||    
T  27666052 tattaacgggccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccg 27666151  T
Q  207 attttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||||||||||||||||||||||||    
T  27666152 atttttcaaaattcaaggacgaatttgaggtatt 27666185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 37796103 - 37796301
Alignment:
Q  43 tacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagggaccattttg 141  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||| ||| || | |||||||||||| ||||||||||||| ||||||    
T  37796103 tacacgtggctgccttcttgacacgtgtagaagacaacacaacatgcaagaggacacatcagcatcgctaacggagcttatggacggagggactattttg 37796202  T
Q  142 atggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||   ||||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  37796203 atggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaaggacaaatttgaggtatt 37796301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 29996411 - 29996634
Alignment:
Q  18 accatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacgga 116  Q
    ||||||||||||||||||||||||||||||||| |||  ||| ||||||||||||| ||||||| |||||| || | | ||||||||||| | |||||||    
T  29996411 accatttccatcaatttagtccttgtacacgtgactgatttgctgacacgtgtacatgacaacaaaacatgtaagaagccacgtcatcactattaacgga 29996510  T
Q  117 gcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaa 216  Q
     |||||||| |||||||| | |||||||||||||||||||||||||||| ||| | ||||||| ||||||||||||||| || ||| ||||||||| |||    
T  29996511 ccttttggatggagggacgaatttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaa 29996610  T
Q  217 attcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||    
T  29996611 attcaaggacgaatttgaggtatt 29996634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 56566 - 56334
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| || |||||||||||||||||||||  | |||||||||||| |||| ||||||||||||||||||||||||||||||| | | ||| |||||||    
T  56566 tcgaattttgaccatttccatcaatttagtctct-tacacgtggctgacttgctgacacgtgtacaagacaacacaacatgcaagaagccacatcatcac 56468  T
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
     |||||| ||  |||||||||||||||     ||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||| || ||||    
T  56467 tactaacagacattttggacggagggagtgaattgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccg 56368  T
Q  207 attttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||||||||||||||||||||||||    
T  56367 atttttcaaaattcaaggacgaatttgaggtatt 56334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 188
Target Start/End: Original strand, 48852236 - 48852415
Alignment:
Q  10 gaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcacca 108  Q
    |||| ||||||||||||||||| ||||| |||||||||||| ||| ||||||||||| |||||||||||||||| |||| || ||||||| |||||||||    
T  48852236 gaatttttaccatttccatcaaattagttcttgtacacgtgactgtcttgttgacacatgtacaagacaacacatcatgtaagaggacacatcatcacca 48852335  T
Q  109 ctaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 188  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  48852336 ctaacagagcttttggaccgagagaccattttgatggacgtctgtaaaattcaaggattaaatagatattttgcaaaatt 48852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 23906141 - 23906307
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||| |||||||||||||||||||||||||| |||  ||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  23906141 ttaaatctcgaatttttacaatttccatcaatttagtccttgtacaagtgtttgccttgttgacacgtgtacaggacaacacagcatgcaagaggacacg 23906240  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  23906241 tcatcgccattaacggagcttttggacggagggaccattttgatggacgactgtaaaatttagggac 23906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 46439410 - 46439544
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||     
T  46439410 ttaaatctcgaatttttaccatttccatcaatttagtccatgtacacgtggctgccctgttgacacgtgtacaagacaacacaacatgcaagaggacaca 46439509  T
Q  100 tcatcaccactaacggagcttttggacggagggac 134  Q
    || ||||||||||||||||||||||||||||||||    
T  46439510 tcgtcaccactaacggagcttttggacggagggac 46439544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 240
Target Start/End: Complemental strand, 20478192 - 20478046
Alignment:
Q  94 gacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcaggg 193  Q
    ||||| ||||||| | |||||||  ||||||||||||||||   ||||||||||||||| |||||||||||||||| | ||||||| | ||||||||||     
T  20478192 gacacatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggt 20478093  T
Q  194 acgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  20478092 acgaaattggccgatttttcaaaattcaaggactattttgaggtatt 20478046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 13169683 - 13169768
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  13169683 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttgaggtatt 13169768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 33038690 - 33038911
Alignment:
Q  14 atttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaa 112  Q
    |||| ||| ||| ||||| | |||||||| |||| ||||| |||| |||||||||||| ||||||||||||||||||  | ||||  ||| ||   ||||    
T  33038690 attttccaattcaatcaaatcagtccttgaacacatggcttccttcttgacacgtgtataagacaacacaacatgcaggacgacagatcaacatgcctaa 33038789  T
Q  113 cggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttt 212  Q
    | ||||  ||||||||||||||| |||||||||||||||| |||||||||||||||| | ||||||| ||| |||| ||||| ||||||| ||||    |    
T  33038790 cagagcacttggacggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccat 33038889  T
Q  213 taaaattcaaggacgaatttga 234  Q
     |||||||||||||||||||||    
T  33038890 aaaaattcaaggacgaatttga 33038911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 39857734 - 39857649
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39857734 aaattctgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatt 39857649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 46996595 - 46996816
Alignment:
Q  14 atttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaa 112  Q
    |||| ||| ||| ||||| || ||||||| |||||||||| |||| ||| |||| ||||||||||||||| ||||||| | ||||  ||| || | ||||    
T  46996595 attttccaattcaatcaaattcgtccttgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgacagatcagcatcgctaa 46996694  T
Q  113 cggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttt 212  Q
    ||||||  ||||||||||||||| ||||||||||||||||  |||||||| |||||| | ||||||| ||| |||| ||||||||| ||||||||    |    
T  46996695 cggagcacttggacggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataattgagggacgaagttggccgacgcgt 46996794  T
Q  213 taaaattcaaggacgaatttga 234  Q
     |||||||| ||||||||||||    
T  46996795 gaaaattcagggacgaatttga 46996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 1546510 - 1546343
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagctt 120  Q
    ||||||||||||||||||||||||||||| || |||| ||||||||| || ||||||||||||||||||  | | ||  ||| || |||||||||| |||    
T  1546510 tttccatcaatttagtccttgtacacgtgacttcctttttgacacgtatataagacaacacaacatgcagggagccagctcagcatcactaacggacctt 1546411  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 188  Q
    |||||||||||||||||||||||||||||  |  ||||||| ||||  ||| ||||||| ||||||||    
T  1546410 ttggacggagggaccattttgatggacgtgagagaaattcaaggacgcaattgatatttcgcaaaatt 1546343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 23904672 - 23904587
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  23904672 aaattcatggactaaatagctattttgcaaaattcagagacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatt 23904587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 35403619 - 35403704
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35403619 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttgaggtatt 35403704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 23 - 234
Target Start/End: Complemental strand, 27955592 - 27955380
Alignment:
Q  23 ttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagcttt 121  Q
    ||||||||| || ||||||| |||| ||||| |||||||| || ||||||||||||||||||||||||  | ||||| ||| ||  |||||||||||  |    
T  27955592 ttccatcaaattggtccttgaacacatggcttccttgttgccaagtgtacaagacaacacaacatgcagcacgacacatcagcatgactaacggagcact 27955493  T
Q  122 tggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattca 221  Q
    ||||||||||||||  |||||||||||||||  ||||||||  | ||| | ||||||| | |||||| ||||| |||||| || |||   | ||||||||    
T  27955492 tggacggagggacctctttgatggacgtctgacaaattcagaaattaagttgatatttcgtaaaattgagggatgaatttagctgatccgtaaaaattca 27955393  T
Q  222 aggacgaatttga 234  Q
    |||||||||||||    
T  27955392 aggacgaatttga 27955380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 37114030 - 37113945
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||    
T  37114030 aaatttagggactaaatagatatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaaggacgaatttgaggtatt 37113945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 207
Target Start/End: Complemental strand, 2167700 - 2167516
Alignment:
Q  24 tccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagctttt 122  Q
    |||||||| |||||||||| || |||||||  ||| ||| |||||||||||||||||||| ||||||  | ||||||||| ||   |||| |||||  ||    
T  2167700 tccatcaaattagtccttgaacgcgtggctttctttttgccacgtgtacaagacaacacatcatgcagggtgacacgtcagcatggctaatggagcactt 2167601  T
Q  123 ggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||||| ||||||||| ||||||  ||||||||||||||| | ||||||| ||| |||| ||||| ||||||| ||||    
T  2167600 ggacggagggacctttttgatgggcgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccga 2167516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 13018172 - 13018037
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttt--gcaaaattcagggacgaatttggc 204  Q
    |||||||||||   ||||||||||||||||||||||||||||| ||| |||||||| ||  |||||||||| ||  || |||||   |||||||||||||    
T  13018172 cactaacggagtgattggacggagggaccattttgatggacgtatgttaaattcagagatgaaatagatatatttcgctaaatttgaggacgaatttggc 13018073  T
Q  205 cgattttttaaaattcaaggacgaatttgaggtatt 240  Q
     |||||||||||||||||||| ||||||||||||||    
T  13018072 tgattttttaaaattcaaggatgaatttgaggtatt 13018037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 234
Target Start/End: Complemental strand, 23954026 - 23953815
Alignment:
Q  24 tccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagctttt 122  Q
    |||||||| |||||||| | |||||||||| |||| ||| |||||||||||||||||||||||||||  | ||||  ||| ||   ||||||||||  ||    
T  23954026 tccatcaaattagtcctggaacacgtggcttcctttttgccacgtgtacaagacaacacaacatgcatggcgacatatcagcatggctaacggagcactt 23953927  T
Q  123 ggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaa 222  Q
    ||||||||||||| ||||||| ||||||||  ||||||| ||||||| | ||||||| ||| |||| | ||||||||||  ||||    | |||||| ||    
T  23953926 ggacggagggacctttttgattgacgtctgacaaattcacggactaagttgatatttcgcataattgatggacgaattttaccgacccgtaaaaatttaa 23953827  T
Q  223 ggacgaatttga 234  Q
    ||||||||||||    
T  23953826 ggacgaatttga 23953815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 78014 - 78099
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||| || | |||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  78014 aaattcagggacaaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaagacgaatttgaggtatt 78099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 6605397 - 6605482
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||| ||||| |||||||||||| || |||||| ||||||||||||||||||||||| |||||||||||||    
T  6605397 aaattcagggactaaatagctatttcgcaaaattcaggaacaaatttgaccgattttttaaaattcaaggacaaatttgaggtatt 6605482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 22155847 - 22155932
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| || |||||||    
T  22155847 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtatt 22155932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 22211762 - 22211847
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| || |||||||    
T  22211762 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtatt 22211847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 24226670 - 24226585
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| |||| |||||| ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24226670 aaattcaaggacaaaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtatt 24226585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 27664519 - 27664434
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||| ||||||||||||| |||||||||||||    
T  27664519 aaattcagggactaatttgatattttgcaaaattcagggacaaaattggccgatttttcaaaattcaaggactaatttgaggtatt 27664434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 48227941 - 48228026
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||| |||||||||||| ||||||||||  |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  48227941 aaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagacgaatttgaggtatt 48228026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 6056989 - 6056844
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagctt 120  Q
    |||||||||| || ||||||||| |||||||| |||||| ||||||||||||| ||||||  |||||||  | ||||  ||| || |||||||||||| |    
T  6056989 tttccatcaaattggtccttgtagacgtggcttccttgtagacacgtgtacaatacaacaggacatgcaggacgacagctcagcagcactaacggagcat 6056890  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    ||||||||| |||| |||||||||||||| ||| ||||||| ||||    
T  6056889 ttggacggaaggactattttgatggacgtttgttaaattcaaggac 6056844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 34775087 - 34775002
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||| |||||||||||||||| | | ||||||| ||||||||||||||||||| |||||||||||| ||||    
T  34775087 aaattcagggactaaatagctattttgcaaaattcatgaatgaatttgaccgattttttaaaattcaaagacgaatttgagatatt 34775002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 35402058 - 35401973
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||| ||||    
T  35402058 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaaggacgaatttgagatatt 35401973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 47384383 - 47384298
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||||| ||||||||| |||||||||| |||||||||||||  |||||| |||||||||||||||||||||||||||    
T  47384383 aaattcggggactaattagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaaggacgaatttgaggtatt 47384298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 47341588 - 47341800
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa--agg---acacgtcatcaccactaacggagcttt 121  Q
    ||||| |||||||||| |||||||||| |||| ||| |||||||||||||||||||| ||||||   |||   ||| |||  ||   ||||||||||  |    
T  47341588 atcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcatgcagggcgacatgtccccatggctaacggagcact 47341687  T
Q  122 tggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattca 221  Q
    |||||||||  ||| |||||||  |||||||  ||||||||||||||| | ||||||| ||| |||| ||||| ||||||||||||    | ||||||||    
T  47341688 tggacggagatacctttttgattaacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattca 47341787  T
Q  222 aggacgaatttga 234  Q
    |||||||||||||    
T  47341788 aggacgaatttga 47341800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 35691516 - 35691430
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattt 241  Q
    ||||||| |||| |||||| ||||| |||||||| || |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  35691516 aaattcaaggacaaaatagctatttcgcaaaatttagagacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattt 35691430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 20479719 - 20479804
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||||||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  20479719 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatt 20479804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 46437196 - 46437111
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| |||| |||||| ||||| ||||||||||  |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  46437196 aaattcaaggacaaaatagctatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatt 46437111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 13039641 - 13039722
Alignment:
Q  154 aaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgag 235  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||||||   ||||||| |||||||||||||||| |||||    
T  13039641 aaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaacttgag 13039722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 23906295 - 23906352
Alignment:
Q  183 aaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23906295 aaaatttagggacgaatttggccgattttttaaaattcaaggaggaatttgaggtatt 23906352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 31913692 - 31913547
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagctt 120  Q
    |||| ||||| || |||||||||||||||||| |||||| ||||||||| ||||||||||   ||||||  | ||||  ||| || |||||||||||| |    
T  31913692 tttcaatcaaattggtccttgtacacgtggcttccttgtagacacgtgtgcaagacaacaagccatgcaggacgacaactcagcaacactaacggagcat 31913593  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    ||||||||| | || |||||||||||||| |||  |||||||||||    
T  31913592 ttggacggaagaactattttgatggacgtttgttgaattcagggac 31913547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 38549624 - 38549551
Alignment:
Q  167 taaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||  ||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||    
T  38549624 taaatagatatttcacaaaattcagggacgaacttggctgatttttgaaaattcaaggacgaatttaaggtatt 38549551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 234
Target Start/End: Original strand, 46812495 - 46812696
Alignment:
Q  34 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttggacggaggg 132  Q
    ||||||||| |||||||||| |||| ||| |||  ||||||||||||||| ||||||  | ||||  ||| ||   ||||| ||||  |||||||||  |    
T  46812495 tagtccttgaacacgtggcttccttcttgccacacgtacaagacaacacagcatgcagggcgacatatcagcatggctaacagagcacttggacggaatg 46812594  T
Q  133 accattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaattt 232  Q
    ||| ||||||||||||||||  ||||| ||||||||||| |||||||  |  |||| ||||| |||||||||||| |  | |||||||||||||||| ||    
T  46812595 acctttttgatggacgtctgacaaatttagggactaaattgatatttcacgtaattgagggatgaatttggccgactcgtaaaaattcaaggacgaagtt 46812694  T
Q  233 ga 234  Q
    ||    
T  46812695 ga 46812696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 202
Target Start/End: Complemental strand, 11682987 - 11682823
Alignment:
Q  39 cttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagggaccat 137  Q
    |||||| ||||||||| |||| ||||| |||||||| ||| |||| ||| ||| | ||||| |||||||||||||| |||   |||||||||||||| |     
T  11682987 cttgtatacgtggctgacttgatgacatgtgtacaacacatcacagcattcaagaagacacctcatcaccactaacagagagattggacggagggactaa 11682888  T
Q  138 tttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttg 202  Q
     |||||||||||||    |||||| ||||||| | ||||||||||| |||| |||||||| ||||    
T  11682887 attgatggacgtctaacgaattcaaggactaatttgatattttgcataattgagggacgattttg 11682823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 29994966 - 29994910
Alignment:
Q  184 aaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  29994966 aaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 29994910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 204
Target Start/End: Original strand, 8423187 - 8423365
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| || |||| || |||||||||| |||| ||| |||| |||||||||| |||| ||||||| | |||| |||| ||   ||||||||||   |  |    
T  8423187 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggcgacatgtcagcatggctaacggagcccgttaa 8423286  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggc 204  Q
    |||||||||| ||||||| ||||||||  ||||||||||| ||||| ||||||| ||| |||| |||||| ||||||||    
T  8423287 cggagggacctttttgattgacgtctgataaattcagggattaaattgatatttcgcataattgagggacaaatttggc 8423365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 23962527 - 23962377
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagctt 120  Q
    |||| ||||| || ||||||||||| |||||| |||||| | ||||||||||||||||||   ||||||  | ||||  ||| || |||||||||||| |    
T  23962527 tttcaatcaaattggtccttgtacatgtggcttccttgtaggcacgtgtacaagacaacaagccatgcaggaagacaactcagcagcactaacggagcat 23962428  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaat 171  Q
    || |||||| |||| |||||||| ||||| ||| |||||||||||| ||||    
T  23962427 tttgacggaaggactattttgattgacgtttgttaaattcagggacaaaat 23962377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 204
Target Start/End: Original strand, 35344196 - 35344374
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaagga-cacgtcatcaccactaacggagcttttgga 125  Q
    ||||| || |||| || |||||||||| |||| ||| |||| |||||||||| |||| ||||||| | | || |||| ||   ||||||||||   |  |    
T  35344196 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggcaacatgtcagcatggctaacggagcccgttaa 35344295  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggc 204  Q
    |||||||||| |||||||||||||||   ||||||||||| ||||| ||||||| ||| |||| |||||||||||||||    
T  35344296 cggagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaatttggc 35344374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 37791744 - 37791658
Alignment:
Q  154 aaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| ||||||||||||||||||| ||||||||  |||| ||||||||| |||||||||||||| || |||||| || |||||||    
T  37791744 aaaatttagggactaaatagatatttggcaaaatttggggatgaatttggctgattttttaaaatttaaagacgaagtttaggtatt 37791658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 45361279 - 45361361
Alignment:
Q  158 ttcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||| ||||||||||  |||||||||||||||||| || || ||| || ||||||||||||||||||| ||||||||||||||    
T  45361279 ttcaaggactaaataactattttgcaaaattcaggaacaaaattgacccattttttaaaattcaaggaagaatttgaggtatt 45361361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 48704403 - 48704337
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatg 88  Q
    |||||||||| || ||||||||||||||| || ||||||||||||||||||| ||||||||||||||    
T  48704403 tttccatcaaattggtccttgtacacgtgacttccttgttgacacgtgtacacgacaacacaacatg 48704337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 34691197 - 34691133
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaaca 86  Q
    |||||||||||||| ||| ||||||||||||| |||||||| |||||||||||| ||||||||||    
T  34691197 tttccatcaatttaatccctgtacacgtggcttccttgttgccacgtgtacaagccaacacaaca 34691133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 40784564 - 40784356
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| ||| |||||| |||| ||| |||||||| ||||||||||||||||||  | ||||  ||| ||  | |||| | || ||||||    
T  40784564 atcaaattagtccttgaacatgtggcttccttcttgccacgtgtataagacaacacaacatgcaggacgacagatcagcatgattaacagcgcatttgga 40784465  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    |||||||||| |||||||||| |||||  |||||||  |||||| | ||||||| ||| |||| | ||| |||||| || ||    | |||||||||| |    
T  40784464 cggagggacctttttgatggatgtctgacaaattcaaagactaagttgatatttcgcataattgaaggatgaatttagctgacgcgtaaaaattcaagaa 40784365  T
Q  226 cgaatttga 234  Q
    |||||||||    
T  40784364 cgaatttga 40784356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 366921 - 366763
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagctt 120  Q
    |||||||||| || |||||| |||||||||||| |  | ||||| ||| |||  ||||||||||||||| || |||| |||| |  ||||||||| |       
T  366921 tttccatcaaattggtccttctacacgtggctgacgggatgacatgtggacatcacaacacaacatgcataacgacatgtcagcctcactaacggtggga 366822  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 179  Q
    |||||||||||||  | |||||| ||||||||| ||||||||||||||| | |||||||    
T  366821 ttggacggagggatgaatttgatagacgtctgttaaattcagggactaatttgatattt 366763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 7402116 - 7401958
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagctt 120  Q
    ||||| |||| || ||| ||||||||||||||| || | |||| ||||||||| ||| ||||||||| | || | ||| ||| || ||||||||||| |     
T  7402116 tttccgtcaaattggtctttgtacacgtggctgactggatgacgcgtgtacaacacagcacaacatgaagagcggcacctcagcatcactaacggagata 7402017  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 179  Q
    ||||| |||| ||  | |||||||||||||||| |||||||||||| || | |||||||    
T  7402016 ttggatggagtgatgaatttgatggacgtctgttaaattcagggacgaatttgatattt 7401958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 45463807 - 45463707
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  ||||| |||||||||||||||||    
T  45463807 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccg 45463708  T
Q  207 a 207  Q
    |    
T  45463707 a 45463707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 234
Target Start/End: Original strand, 38613498 - 38613595
Alignment:
Q  137 ttttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
    |||| |||||||||||  ||||||||||||||| | ||||||| ||| |||| ||||| ||||||||||||    | |||||| ||||||||||||||    
T  38613498 tttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattgaaggacgaatttga 38613595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 13034896 - 13034828
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca 90  Q
    ||||||| || || ||||||||||||||||||| || | ||||||||||||| ||||||||| ||||||    
T  13034896 tttccatgaaattggtccttgtacacgtggctgactagatgacacgtgtacaggacaacacagcatgca 13034828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 45463872 - 45463808
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaaca 86  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| ||||||||||    
T  45463872 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacaaca 45463808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 46439539 - 46439618
Alignment:
Q  161 agggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||| |||||||| |  ||| | ||||  |||||||| ||||||||| |||||||||||| ||||    
T  46439539 agggactaaatagatatttcgcaaaatttaaagacaagtttgatcgatttttaaaaattcaatgacgaatttgagatatt 46439618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 46867836 - 46867895
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 81  Q
    |||||||||| || ||||||||||| |||||| |||||  ||||||||||||||||||||    
T  46867836 tttccatcaaattggtccttgtacatgtggcttccttgaagacacgtgtacaagacaaca 46867895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 38613684 - 38613618
Alignment:
Q  24 tccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca 90  Q
    |||||||| |||||||||| ||||||||||  ||| ||  |||||||||||||||||||| ||||||    
T  38613684 tccatcaagttagtccttgaacacgtggctttctttttcccacgtgtacaagacaacacaccatgca 38613618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 8421505 - 8421453
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||||||||||||    
T  8421505 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 8421453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 2492548 - 2492493
Alignment:
Q  23 ttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagaca 78  Q
    ||||||||| |||||||||| ||||||| || |||| ||| |||||||||||||||    
T  2492548 ttccatcaaattagtccttgaacacgtgacttcctttttgccacgtgtacaagaca 2492493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 46810794 - 46810715
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
    ||||||||||| ||||| ||||||| ||| |||| |||||| ||||||||||||   | |||||||| ||||||| ||||    
T  46810794 aaattcagggattaaattgatatttcgcataattgagggactaatttggccgatccgtgaaaattcagggacgaagttga 46810715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 20478238 - 20478192
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctg 54  Q
    |||||| || || |||||||||| |||||||||||||||||||||||    
T  20478238 tcgaattttgacaatttccatcagtttagtccttgtacacgtggctg 20478192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 34691121 - 34691031
Alignment:
Q  118 cttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgat 208  Q
    |||||||| |||||||| |  |||||||||||| |  |||||||| |||||  | |||||||||  |||||  ||||||||||||||||||    
T  34691121 cttttggatggagggacgaaattgatggacgtcagacaaattcagagactattttgatattttgttaaatttggggacgaatttggccgat 34691031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 38614916 - 38614993
Alignment:
Q  124 gacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttg 202  Q
    ||||||||||| ||||| |||||||||||  ||||||||||||||| |  |||||| ||| |||| ||||| |||||||    
T  38614916 gacggagggac-atttttatggacgtctgacaaattcagggactaagttaatatttcgcataattgagggatgaatttg 38614993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 48311733 - 48311803
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    |||||||||||  || |||| |||| |||||||| | ||| ||||||| | ||||||||||||||||||||    
T  48311733 aaattcagggatgaattagacatttcgcaaaatttaaggatgaatttgactgattttttaaaattcaagga 48311803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 4322494 - 4322555
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||||||||||||||||| |||||||||| ||  ||| ||  |||||||||||| |||||||    
T  4322494 tttccatcaatttagtccctgtacacgtgactttctttttcccacgtgtacaagccaacaca 4322555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 4322559 - 4322660
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    |||||||||| ||||||||||||||||| |  |||||||| |||    ||||||||||||||  | ||||||| |  |||||  ||||||| ||||||||    
T  4322559 cactaacggaccttttggacggagggacgaaattgatggatgtcaaacaaattcagggactattttgatatttcgttaaattgggggacgagtttggccg 4322658  T
Q  207 at 208  Q
    ||    
T  4322659 at 4322660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 48303571 - 48303632
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||| ||||||||||||| |||||||||||||  ||| ||  |||||||||||| |||||||    
T  48303571 tttctatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacaca 48303632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 4321127 - 4321075
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||| ||||||||    
T  4321127 aaattcagggattaaattgatatttcgcataattaagggacgaagttggccga 4321075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 17199139 - 17199071
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca 90  Q
    |||||||||| || |||||||||||  || ||  ||||| ||||||||||||||||||||  |||||||    
T  17199139 tttccatcaaattggtccttgtacatatgactttcttgtagacacgtgtacaagacaacatgacatgca 17199071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 19712264 - 19712312
Alignment:
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 169  Q
    |||||||| ||||||||||||||||||||||   |||||||| ||||||    
T  19712264 ttggacggtgggaccattttgatggacgtctaataaattcagagactaa 19712312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 30108654 - 30108602
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||| ||||||||    
T  30108654 aaattcagggattaaattgatatttcgcataattgagggacgaagttggccga 30108602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 31915040 - 31915084
Alignment:
Q  122 tggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    |||||| |||||| |||||||||||||| ||| ||||||||||||    
T  31915040 tggacgtagggactattttgatggacgtttgttaaattcagggac 31915084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 35342514 - 35342462
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| |||||| |||||||||||    
T  35342514 aaattcagggattaaattgatatttcgcataattgagggacaaatttggccga 35342462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 51012169 - 51011930
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  51012169 ttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacatcatgcaagggacacgt 51012070  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| | | |||||    
T  51012069 catcactactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcaagaaagaatt 51011970  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    || |||||||||||||||||||||||||||||||| ||||    
T  51011969 tgaccgattttttaaaattcaaggacgaatttgagatatt 51011930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 41761626 - 41761866
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| ||| |||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||| ||||||| |||||||     
T  41761626 ttaaatcttgaatttttaccatttccatcgatttagtccttgtacacgtgactgccttgttgacacgtgtacatgagaacacagcatgcaagaggacaca 41761725  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||    
T  41761726 tcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacgaat 41761825  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  41761826 ttggccgatttttgaaaattcaaggacgaatttgaggtatt 41761866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 49523368 - 49523128
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| |||||||||||||||||||||||| ||||||||| || || |||||||||||||||||||||||||||||||||||| | | |||     
T  49523368 ttaaatctcgaatttttaccatttccatcaatttagtctttgtacacgcggttgtcttgttgacacgtgtacaagacaacacaacatgcaagaaggcaca 49523269  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  49523268 tcatcaccactaacggattttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacgaat 49523169  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    || |||||||||||||||||||| |||||||||||||||||    
T  49523168 ttagccgattttttaaaattcaatgacgaatttgaggtatt 49523128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 48814017 - 48813791
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| ||||||| |||||||||| |||    
T  48814017 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttaacacatgtacatgacaacacaacatgcaagaggacacatcatcaccaccaac 48813918  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
     ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||  |||||||| |||||||     
T  48813917 agagcttttggacgaagggaccattttgatggacgtctataaaattcaggaactaaatatatattttgcaaaattcagggataaatttggctgatttttg 48813818  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||||||||    
T  48813817 aaaattcaaggacgaatttgaggtatt 48813791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 41781783 - 41781543
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||  ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||  ||||| ||||||||| ||||||| |||||||     
T  41781783 ttaaatctcgaagttttaccatttccatcaatttagttcttgtacacatggctgctttgttgacacacgtacatgacaacacatcatgcaagaggacaca 41781684  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  41781683 tcatcatcactaacggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggacaaat 41781584  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| |||||||||||||||||||| || |||||||||||||    
T  41781583 ttgaccgattttttaaaattcaagaacaaatttgaggtatt 41781543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 35404332 - 35404565
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| |||||||||||||| || |||||||||||||||    
T  35404332 tcgaatttttaccatttccatcaatttagtcattgtacacgtggctgtcttgttgacacatgtacatgacaacacaacatggaagaggacacgtcatcac 35404431  T
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| |||||| |||||||| | |||||||||| ||||    
T  35404432 cactaacggagcttttggacggatggaccattttgttggacgtctgtaaaattcagggattaaataaatatttcgcaaaattgaaggacgaatttagccg 35404531  T
Q  207 attttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||| | |||| |||||||||    
T  35404532 attttttaaaattcaagtatgaatctgaggtatt 35404565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 48646641 - 48646852
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||||||||    
T  48646641 tttaccatttccatcaaattagtccttgtacacgtggttgccttgttgacacgtgtaaatgacaacacaacatgcaagaggacacatcatcaccactaac 48646740  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
    | |||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||| || ||||||| |||||||||| || || ||||     
T  48646741 gaagcttttggacggaaggaccattttgatgaaggtctgtaaaattcagggactaaatagatatttcgctaaattcaaggacgaatttagctgacttttg 48646840  T
Q  214 aaaattcaagga 225  Q
    ||||||||||||    
T  48646841 aaaattcaagga 48646852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 42980879 - 42980674
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||| |||||||||||||||||| ||||||||||| ||| |||||||||||||||||| ||||||||||||||||| |||||||     
T  42980879 ttaaatctcgaatttttacaatttccatcaatttagtctttgtacacgtgactgtcttgttgacacgtgtacaggacaacacaacatgcaagaggacaca 42980780  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| | |||||||| |||| |||    
T  42980779 tcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattaagggactaaatagaaatttcgtaaaattcatggacaaat 42980680  T
Q  200 ttggcc 205  Q
    ||||||    
T  42980679 ttggcc 42980674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 43519661 - 43519428
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| || |||||||||||||||||||||||||||||| |||||| |||| |||||||||| || ||||||| | ||||||| | | ||| |||||||    
T  43519661 tcgaattttgaccatttccatcaatttagtccttgtacacatggctgacttgctgacacgtgtgcatgacaacaaagcatgcaagaagccacatcatcac 43519562  T
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
     | ||| ||| |||||||||||||||||   |||||||||||| ||||||||||||||||||| | ||||||| |||||||||||||||||| |||||||    
T  43519561 tattaatggaccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccg 43519462  T
Q  207 attttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||||||||||||||||||||||||    
T  43519461 atttttcaaaattcaaggacgaatttgaggtatt 43519428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 15 - 240
Target Start/End: Original strand, 2693147 - 2693372
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||| | ||||| |||||| ||||||     
T  2693147 tttaccatttccatcaaattagtccttgtacacgtggctgccttcttgacacgtgtacaggacaacacagcatgcaagatgacacatcatcatcactaat 2693246  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
    ||| ||| |||||||| ||||||||||||||||| | | |||||||||  |||||||||||||||| |||||||| ||| |  |||||||| ||||||||    
T  2693247 ggaacttatggacggatggaccattttgatggacat-tttaaaattcaaagactaaatagatatttcgcaaaatttaggaataaatttggctgatttttt 2693345  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||| |||||| ||||||||||    
T  2693346 aaaattcaaagacgaagttgaggtatt 2693372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 11601900 - 11601675
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||||||||||||| ||||||||| ||||||||  |||||| |||||||||||||| |||||||||||| |||| ||||||| ||| || |||||||    
T  11601900 tttaccatttccatcaaattagtccttatacacgtgattgccttcttgacacgtgtacatgacaacacaacacgcaagaggacacatcagcatcactaac 11601801  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
    | ||||| ||||| ||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||  ||||  |||||| | |||||||     
T  11601800 gaagcttgtggacagagggactattttgatggacgtctgtaaaattcagggact-aatatatattttgcaaaatttggggataaatttgactgatttttg 11601702  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||| |||||||| |||||||    
T  11601701 aaaattcaagaacgaattttaggtatt 11601675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 52868091 - 52868254
Alignment:
Q  63 acacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattca 161  Q
    ||||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||| || |||||||||||| | ||||||| |||||||    
T  52868091 acacgtgtacatgacaacacagcatgcaagaggacacgtcatcgccactaacggagcttttggacgaagtgaccattttgataggcgtctgttaaattca 52868190  T
Q  162 gggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    | |||||||||||||||| |||||||| |  |||||||||| ||||||||||||||||||||||    
T  52868191 gagactaaatagatatttcgcaaaatttatagacgaatttgaccgattttttaaaattcaagga 52868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 207
Target Start/End: Complemental strand, 35996281 - 35996100
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||  | |||| |||| ||   ||||||||||  |||||    
T  35996281 atcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacaacatgcatggcgacatgtcagcatggctaacggagcacttgga 35996182  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    |||||||||| ||||||||||||||||  ||||||||||| ||||| ||||||||||| |||| ||||||||||||| ||||    
T  35996181 cggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcacaattgagggacgaatttgaccga 35996100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 49524733 - 49524818
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49524733 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatt 49524818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 11255820 - 11255927
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||     
T  11255820 ttaaatctcgaatttttacaatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgtaagaggacaca 11255919  T
Q  100 tcatcacc 107  Q
    ||||||||    
T  11255920 tcatcacc 11255927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 35401838 - 35401753
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35401838 aaattcaaggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 35401753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 39345653 - 39345574
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39345653 aaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 4173740 - 4173825
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  4173740 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 4173825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 43507256 - 43507171
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  43507256 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 43507171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 43508653 - 43508738
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  43508653 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 43508738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 20493916 - 20493831
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||| ||||||||||||||| |||||||||| | ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  20493916 aaattcaggaactaaatagatatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatgacgaatttgaggtatt 20493831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 33264471 - 33264386
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||| ||||| | |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  33264471 aaattcaggaactaatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 33264386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 51013886 - 51013971
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||| | | |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  51013886 aaattcagggactcatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 51013971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 207
Target Start/End: Original strand, 2350410 - 2350594
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaaga---caacacaacatgcaaag-gacacgtcatcaccactaacggagctttt 122  Q
    ||||| |||||||||| |||||||||| |||| ||| |||||||||||||   ||||||| |||||| || |||| |||| ||   ||||||||||  ||    
T  2350410 atcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagagtacaacacagcatgcagagcgacatgtcagcatggctaacggagcactt 2350509  T
Q  123 ggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    |||| |||||||| |||||||| |||||||  |||||||| || ||||| ||||||| ||| |||| |||||| |||||||||||    
T  2350510 ggacagagggacctttttgatgaacgtctgataaattcagagattaaattgatatttcgcataattgagggacaaatttggccga 2350594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 319362 - 319277
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||| ||||| | ||||||| |||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  319362 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatt 319277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 207
Target Start/End: Complemental strand, 47942029 - 47941848
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| || ||||||| |||||||||| |||| ||| |||| |||||||||| |||||||||||| | |||| |||| ||   ||||||||||   |  |    
T  47942029 atcaaattcgtccttgaacacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgtcagcatggctaacggagcccgttaa 47941930  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    |||||||||| ||||||||||||||||  ||||||||||| ||||| ||||||| ||| |||| || |||||||||| ||||    
T  47941929 cggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagagacgaatttgaccga 47941848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 48645336 - 48645259
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||| |||||||||| ||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  48645336 ggactaaatagatatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatt 48645259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 7149763 - 7149551
Alignment:
Q  22 tttccatcaatttagtccttgtacacgt-ggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagct 119  Q
    ||||||| || || |||||||||||||| || || || | ||||||||||||| |||||||||||||||| || |||| |||| |  ||||||  |||      
T  7149763 tttccattaaattggtccttgtacacgtaggttgactagatgacacgtgtacaggacaacacaacatgcagaacgacatgtcagcctcactaatagagtg 7149664  T
Q  120 tttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaatt 219  Q
     ||||||||||||||||||||||| ||| | ||| ||||||| |||  ||||| |||||| |||||||| |  || ||||| ||| ||||||| ||||||    
T  7149663 attggacggagggaccattttgattgacctatgttaaattcaaggatgaaataaatatttcgcaaaatttaaagatgaattcggctgatttttgaaaatt 7149564  T
Q  220 caaggacgaattt 232  Q
    |||||| ||||||    
T  7149563 caaggatgaattt 7149551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 207
Target Start/End: Original strand, 44794666 - 44794847
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| || |||| || |||||||||| |||| ||| |||| |||||||||| |||| ||||||| | |||| |||| ||   ||||||||||   |  |    
T  44794666 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacatcacagcatgcaaggcgacatgtcagcatggctaacggagcccgttaa 44794765  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    |||||||||| ||||||||||||||||  ||||||||||| ||||| ||||||| ||| |||| ||||||||||||| ||||    
T  44794766 cggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccga 44794847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 234
Target Start/End: Original strand, 44558407 - 44558607
Alignment:
Q  35 agtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttggacggaggga 133  Q
    |||||||| |||||||||| |||| ||| |||| ||||||||||||| | ||||||  | ||||  ||| ||   |||||  |||  ||||||||| |||    
T  44558407 agtccttgaacacgtggcttccttcttgccacgcgtacaagacaacagagcatgcatggtgacagatcagcatggctaacatagcacttggacggaagga 44558506  T
Q  134 ccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttg 233  Q
    || ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| ||||| ||||||||||||    | |||||||||||||||| |||    
T  44558507 cctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattcaaggacgaagttg 44558606  T
Q  234 a 234  Q
    |    
T  44558607 a 44558607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 11254208 - 11254121
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatttg 242  Q
    ||||||| |||| ||| || ||||| |||||||| || |||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  11254208 aaattcaaggacaaaagagctatttcgcaaaatttagagacggatttggccgatttttaaaaattcaaggacgaatttgaggtatttg 11254121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 320903 - 320985
Alignment:
Q  158 ttcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||| ||||||| | ||||||| |||||||||| ||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  320903 ttcaaggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 320985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 2691463 - 2691378
Alignment:
Q  154 aaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||| ||||||| ||||||||| || ||| ||||||||||    
T  2691463 aaaattcagggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattcaa-gatgaagttgaggtatt 2691378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 196
Target Start/End: Complemental strand, 2827622 - 2827452
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| ||||||| || |||||||||| |||| ||| |||| ||||||||||||||| ||||||| | ||||  ||| ||   |||||||||   |||||    
T  2827622 atcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacatcatgcaagacgacagatcagcaaggctaacggaggacttgga 2827523  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacg 196  Q
    |||||||||| ||||||||||||||||  ||||||| ||||||| | |||||||  || |||| |||||||    
T  2827522 cggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacg 2827452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 20820075 - 20819989
Alignment:
Q  154 aaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||| ||||||||||||||| ||| |  |||||| | ||||||| |||||||||||||||| ||||||||||    
T  20820075 aaaattcagggactaaataaatattttgcaaaatttaggaataaatttgactgatttttgaaaattcaaggacgaagttgaggtatt 20819989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 4169775 - 4169690
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| |||  | |||||| |||||||||||||||||||||||||||    
T  4169775 aaattcagggactaatttgatatttcgcaaaattcagagacgaaattgatcaatttttcaaaattcaaggacgaatttgaggtatt 4169690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 26296799 - 26296940
Alignment:
Q  26 catcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttgg 124  Q
    |||||| || ||||||||| |||||||| |||||| ||||||||||||||||||||  |||||||| | ||||  |||||| ||||||| || | |||||    
T  26296799 catcaaattggtccttgtatacgtggcttccttgtagacacgtgtacaagacaacatgacatgcaagacgacagctcatcaacactaacagatcatttgg 26296898  T
Q  125 acggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    | |||  ||| |||||||||||||| ||  ||||||||||||    
T  26296899 atggaatgactattttgatggacgtttgacaaattcagggac 26296940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 33266010 - 33266095
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||| ||||| || |||||||||| |||||||||| ||||||||||| ||||    
T  33266010 aaattcagggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaagaacgaatttgagatatt 33266095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 50131392 - 50131240
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaac 113  Q
    |||||| ||| |||||| |||||||||||||||||| || |||||| ||||||||||||||||||||  ||||| |  | || |  ||| || |||||      
T  50131392 tttaccgttttcatcaaattagtccttgtacacgtgacttccttgtagacacgtgtacaagacaacatgacatgtaggacgatagctcagcagcactact 50131293  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    ||||| ||||||||||  ||| |||||||||||||| ||| ||||||||||||    
T  50131292 ggagcatttggacggaatgactattttgatggacgtttgtcaaattcagggac 50131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 234
Target Start/End: Complemental strand, 4519597 - 4519386
Alignment:
Q  24 tccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagctttt 122  Q
    |||||||| |||||||||| ||||||| ||  ||| ||| |||||||||||||||||||| ||||||  | ||||  ||| ||   |||||||||| |||    
T  4519597 tccatcaaattagtccttgaacacgtgactttctttttgccacgtgtacaagacaacacagcatgcagggcgacagatcagcatggctaacggagcattt 4519498  T
Q  123 ggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaa 222  Q
    ||||||||||||| |||||||| | ||||   |||||||  | ||||   ||||||| ||| |||| ||||| |||||||||| |    | |||||||||    
T  4519497 ggacggagggacctttttgatgaatgtctaacaaattcaaaggctaagctgatatttcgcataattgagggatgaatttggccaaccggtaaaaattcaa 4519398  T
Q  223 ggacgaatttga 234  Q
    ||||||||||||    
T  4519397 ggacgaatttga 4519386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 833312 - 833227
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||  | ||||||| | | |||||||||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  833312 aaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatt 833227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 5439647 - 5439732
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||  | ||||||| | | |||||||||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  5439647 aaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatt 5439732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 10372711 - 10372820
Alignment:
Q  125 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagg 224  Q
    ||||||||||| ||||||||||||||||  |||||||||||  |||| ||||||| ||| |||| |||||| |||||||||||    | |||||||| ||    
T  10372711 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 10372810  T
Q  225 acgaatttga 234  Q
    ||||||||||    
T  10372811 acgaatttga 10372820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 27382340 - 27382195
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagctt 120  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| ||  |||||||  | || |  ||| || ||||||| || | |    
T  27382340 tttccatcaaattagtccttgtacacgtggctttcttgttgacacgtgtacaagacaccatgacatgcaggacgaaagctcagcagcactaacagaacat 27382241  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    ||||||| |  ||| |||||||||||||| |||  |||||||||||    
T  27382240 ttggacgaaatgactattttgatggacgtttgttgaattcagggac 27382195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 25993721 - 25993653
Alignment:
Q  20 catttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatg 88  Q
    |||||||||||| || |||| ||||||||||||| | ||||||||||||||||||||||||||| ||||    
T  25993721 catttccatcaaattggtccatgtacacgtggcttcattgttgacacgtgtacaagacaacacatcatg 25993653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 51041837 - 51042044
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| ||| |||||| |||| ||| |||||||| ||||||||||||||||||  | ||||  ||| ||   |||||  |||  |||||    
T  51041837 atcaaattagtccttgaacatgtggcttccttcttgccacgtgtataagacaacacaacatgcagggcgacagatcagcatggctaacaaagcacttgga 51041936  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
     ||||||||| ||||||| ||||||||  ||||||| ||||||| | |||||||  || |||| ||||| ||||||| ||||  | | |||||| |||||    
T  51041937 tggagggacctttttgat-gacgtctgacaaattcatggactaagttgatatttcacataattgagggatgaatttgaccgacctgtaaaaatttaagga 51042035  T
Q  226 cgaatttga 234  Q
    |||||||||    
T  51042036 cgaatttga 51042044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 5437900 - 5437815
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||  | ||||||| | | |||||||||||||| || |||||||||| ||||||||||||| | |||||||||||    
T  5437900 aaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtatt 5437815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 10762700 - 10762591
Alignment:
Q  125 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagg 224  Q
    ||||||||||| ||||||||||||||||  |||||||||||  |||| || |||| ||| |||| |||||| |||||||||||    | |||||||| ||    
T  10762700 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 10762601  T
Q  225 acgaatttga 234  Q
    ||||||||||    
T  10762600 acgaatttga 10762591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 39083776 - 39083676
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  ||||| |||||||||||||||||    
T  39083776 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccg 39083677  T
Q  207 a 207  Q
    |    
T  39083676 a 39083676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 835012 - 835127
Alignment:
Q  125 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagg 224  Q
    |||||||||| | |||||| ||||| |   ||||||||||||||  | ||||||| | | ||||||||||| || |||| |||||||| |||||||||||    
T  835012 acggagggactaatttgattgacgttttgtaaattcagggactattttgatatttcgaataattcagggacaaaattggtcgatttttcaaaattcaagg 835111  T
Q  225 acgaatttgaggtatt 240  Q
    || | |||||||||||    
T  835112 actattttgaggtatt 835127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 13450970 - 13451069
Alignment:
Q  110 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatt 209  Q
    |||| |||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||  | ||||||| |  |||||  |||||||||||||| ||||    
T  13450970 taacagagcatttggatggagggaccattttgatggacgtctgataaattcaaggactattttgatatttcgttaaattgggggacgaatttggctgatt 13451069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 42982452 - 42982522
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    ||||||| |||| |||||  ||||| |||||||||||||||||||||| | ||||||| ||||||||||||    
T  42982452 aaattcaaggacaaaataactatttcgcaaaattcagggacgaatttgacagatttttaaaaattcaagga 42982522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 52868048 - 52868097
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtg 50  Q
    |||| |||| ||| ||||||||||||||||||||||||||||||||||||    
T  52868048 ttaaatctcaaatttttaccatttccatcaatttagtccttgtacacgtg 52868097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 54387890 - 54387958
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaattt 232  Q
    ||||||||||||||||| |||||||| ||| || |||||||| ||||||| |||||| ||||||||||||    
T  54387890 ggactaaatagatatttcgcaaaatt-aggaactaatttggctgatttttaaaaatttaaggacgaattt 54387958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 5484677 - 5484577
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  ||||||||||||||||    
T  5484677 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 5484578  T
Q  207 a 207  Q
    |    
T  5484577 a 5484577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 39083841 - 39083777
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaaca 86  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| ||||||||||    
T  39083841 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacaaca 39083777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 39189584 - 39189520
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaaca 86  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| ||||||||||    
T  39189584 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacaaca 39189520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 39921631 - 39921531
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  ||||||||||||||||    
T  39921631 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 39921532  T
Q  207 a 207  Q
    |    
T  39921531 a 39921531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 43521109 - 43521193
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtat 239  Q
    ||||||||||||||| | ||||||| ||||||||||   ||||| ||| | ||||||| |||||||||| || ||||||||||||    
T  43521109 aaattcagggactaatttgatatttcgcaaaattcaaaaacgaaattgactgatttttcaaaattcaagaacaaatttgaggtat 43521193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 43779854 - 43779954
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  ||||||||||||||||    
T  43779854 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 43779953  T
Q  207 a 207  Q
    |    
T  43779954 a 43779954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 44972548 - 44972489
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    |||||||||||| |||||||||| |||| |||||||||||||| ||| ||||| ||||||    
T  44972548 cactaacggagcatttggacggaaggactattttgatggacgtttgttaaatttagggac 44972489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 27625024 - 27624862
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| |||||||||| |||||||||| |||| ||| |||  ||||||||||||| | ||||||  | ||||  ||| ||   ||||| ||||  || ||    
T  27625024 atcaaattagtccttgaacacgtggcttccttcttgccacacgtacaagacaacaaagcatgcatggcgacagatcaacatggctaacagagcactttga 27624925  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 188  Q
    ||||  |||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| ||||    
T  27624924 cggaatgacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataatt 27624862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 5484742 - 5484681
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| |||||||    
T  5484742 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacaca 5484681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 32652301 - 32652240
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||||||||||||||||| ||||||||||||| |||| ||  |||||||| ||| |||||||    
T  32652301 tttccatcaatttagtccatgtacacgtggcttcctttttcccacgtgtataagccaacaca 32652240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 39189516 - 39189419
Alignment:
Q  110 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  |||||||||||||||||    
T  39189516 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 39189419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 41356094 - 41356159
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacat 87  Q
    |||||||||| || |||||||| ||||||||| ||||||||||||   ||||| ||||||||||||    
T  41356094 tttccatcaaattggtccttgttcacgtggcttccttgttgacacaattacaaaacaacacaacat 41356159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 42880683 - 42880744
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| |||||||    
T  42880683 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagtcaacaca 42880744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 43779789 - 43779850
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| |||||||    
T  43779789 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacaca 43779850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 32652236 - 32652136
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||| ||||||  | ||||||| |  |||||  ||||||||||||||||    
T  32652236 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcaaggactattttgatatttcgttaaattgggggacgaatttggccg 32652137  T
Q  207 a 207  Q
    |    
T  32652136 a 32652136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 44793023 - 44792971
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||||||||||||    
T  44793023 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 44792971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 44994274 - 44994374
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    |||||||||| |||||||| |||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  ||||||||||||||||    
T  44994274 cactaacggaccttttggatggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 44994373  T
Q  207 a 207  Q
    |    
T  44994374 a 44994374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 39923009 - 39923088
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 234  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||| ||||||||  | | |||||||| ||||||| ||||    
T  39923009 aaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacctgtaaaaattcagggacgaaattga 39923088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 39921696 - 39921635
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||||||||||||||||| |||||||||||||  ||| ||  ||| |||||||| |||||||    
T  39921696 tttccatcaatttagtccctgtacacgtggctttctttttcccacatgtacaagccaacaca 39921635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 1506 - 1267
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaaggacacgt 100  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  1506 ttaagtcttgaatttttaccatttccatcaatttagtccttgtacacgtggttgccttgttgacacgtgtacaagacaacacagcatgcaagggatacgt 1407  T
Q  101 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||    
T  1406 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcataaaattcatggacgaatt 1307  T
Q  201 tggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |  || ||||||||||||||||||||| ||||||||||||    
T  1306 taaccaattttttaaaattcaaggacggatttgaggtatt 1267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 177; Significance: 2e-95; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 11355466 - 11355226
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  11355466 ttaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacg 11355367  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||||||   ||||||||| |||||||    
T  11355366 tcatcaccactaccggagcttttggacggagggaccattttggtggccgtctgtaaaattcagggagttaatagatatttcataaaattcagtgacgaat 11355267  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  11355266 ttgaccgattttttaaaattcaaggacgaatttgaggtatt 11355226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 32438964 - 32439211
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgta--------cacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaa 92  Q
    ||||||||||||  ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||| |||||||     
T  32438964 ttaagtctcgaaattttaccatttccatcaatttagtccttgtacacgtgtacacgtggctgccttgttgacacgtgtacaagacaacacatcatgcaag 32439063  T
Q  93 ggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagg 192  Q
    |||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32439064 ggacacgtcatcactactaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagg 32439163  T
Q  193 gacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  32439164 gacgaatttgaccgattttttaaaattcaatgactaatttgaggtatt 32439211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 32517121 - 32516881
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||| ||||||| || |||||    
T  32517121 ttaaatctcaaatttttaccatttccatcaatttagtccttatacacgtggctgccttgttaacacgtgtacatgacagcacatcatgcaagagaacacg 32517022  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||||||| ||||||| |||||||||||||||||    
T  32517021 tcatcaccactaacggagcttttggacggagggacaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagggacgaat 32516922  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  32516921 ttgaccgattttttaaaattcaaggacgaatttgaggtatt 32516881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 20523610 - 20523370
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||| | |||||     
T  20523610 ttaaatctcgaatttttaccattttcatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaggacaacacggcatgcaagaagacaca 20523511  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  20523510 tcatcaccactaacagaacttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaat 20523411  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| ||||||||| ||||||| |||| |||||||| |||||    
T  20523410 ttgaccgatttttgaaaattctaggaagaatttgatgtatt 20523370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 10568629 - 10568403
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaa-ggacacgtcatcaccactaac 113  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  10568629 tttaccatttccatcaaattagtccttgtacatgtggctgccttgttgacacgtgtacatgacaacacaacatgcaaaaggacacatcatcaccactaac 10568530  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||| || ||||||| ||||||||||| | |||||||     
T  10568529 ggagcttttggacggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacgaatttgactgatttttg 10568430  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||||||| |||||    
T  10568429 aaaattcaaggacgaatttgatgtatt 10568403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 6899715 - 6899489
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| ||||||| |||||| |||||||    
T  6899715 tttactatttccatcaaattagtccttgtacacgtggttgccttgttgacacgtgtacatgataacacaacatgcaagaggacacatcatcaacactaac 6899616  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
    |||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||  ||||||| || |||||||||| | |||||||     
T  6899615 ggagcttttggacgaagggaccattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatttagagacgaatttgactgatttttg 6899516  T
Q  214 aaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||| |||||||||||||    
T  6899515 aaaattcaaggacaaatttgaggtatt 6899489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 13613462 - 13613702
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||| |||||| |||| ||||||||||| | ||||||||| |||| || | | |||     
T  13613462 ttaaatctcgaatttttacaatttccatcaatttagtccttgtacacatggctgacttgctgacacgtgtataggacaacacagcatgaaagaagccaca 13613561  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||| ||| ||||||||||||||||| | |||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||    
T  13613562 tcatcaccactaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaat 13613661  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| ||||||||| ||||||||||||||||||| |||||||    
T  13613662 ttgaccgatttttcaaaattcaaggacgaatttaaggtatt 13613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 9398904 - 9398713
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacg 99  Q
    |||| |||||||| ||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||  |||||     
T  9398904 ttaaatctcgaatttttataatttccatcaatttagtccttgtacacgtggctgtcttgttgacacgtgtacaggacaacacaacatgcaaaatgacaca 9398805  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcag 191  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||    
T  9398804 tcatcaccactaacggaacttttggacggagggaccattttgatgaacgtctataaaattcagggactaaatagatatttcgcaaaattcag 9398713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 7049987 - 7049835
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| |||    
T  7049987 tttaccatttccatcaaattagtccttgtacacgtggatgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacatcatcaccacgaac 7049888  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7049887 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 7049835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 15 - 229
Target Start/End: Original strand, 14338369 - 14338584
Alignment:
Q  15 tttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaac 113  Q
    ||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||| |||| || |||||| || ||||    
T  14338369 tttaccatttccatcaaattggtccttgtacacgtggcttccttgttgacacgtgtacaggacaacacatcatgcaacaggatacatcatcatcagtaac 14338468  T
Q  114 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatttttt 213  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||  || |||| |||| ||||||||   ||||||||||||| |||||||     
T  14338469 ggagcttttgaacggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatttgaggacgaatttggctgattttta 14338568  T
Q  214 aaaattcaaggacgaa 229  Q
    ||||||||||||||||    
T  14338569 aaaattcaaggacgaa 14338584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 33 - 240
Target Start/End: Original strand, 7372881 - 7373078
Alignment:
Q  33 ttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagg 131  Q
    ||||||||||||||||||||||||||||||||||           |||||| |||  || || |||| ||||||||||||| ||||||||||||||||||    
T  7372881 ttagtccttgtacacgtggctgccttgttgacac-----------aacacagcatataagagcacacatcatcaccactaatggagcttttggacggagg 7372969  T
Q  132 gaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatt 231  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||| |||||||||  |||||||    
T  7372970 gaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacgaatttgaccaatttttaaaaattcaatcacgaatt 7373069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 100 - 226
Target Start/End: Complemental strand, 3456892 - 3456766
Alignment:
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||| | |||||||  ||||||||||||||||   ||||||||||||||| |||||||||||||||| | ||||||| | ||||||||||||||||     
T  3456892 tcatcactattaacggatattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 3456793  T
Q  200 ttggccgattttttaaaattcaaggac 226  Q
    ||||||||||||| |||||||||||||    
T  3456792 ttggccgatttttcaaaattcaaggac 3456766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 10569927 - 10570004
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10569927 ggactaaatagatattttgcaaaattcatggacgaatttggctgattttttaaaattcaaggacgaatttgaggtatt 10570004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 110 - 240
Target Start/End: Original strand, 32455881 - 32456011
Alignment:
Q  110 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatt 209  Q
    |||||||  ||||||||||||||||   ||||||||||||||| ||||||||| |||||| | ||||||| | |||||||||||||||| ||| ||||||    
T  32455881 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacgaaattgaccgatt 32455980  T
Q  210 ttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||| ||||||||||||| | |||||||||||    
T  32455981 tttcaaaattcaaggactattttgaggtatt 32456011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 11357194 - 11357279
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  11357194 aaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtatt 11357279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 32518497 - 32518582
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  32518497 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtatt 32518582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 30891349 - 30891159
Alignment:
Q  20 catttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagc 118  Q
    |||||||||||| || ||||||||||||||||||   ||||||||||||||||||||||| || |||||||  | ||||  | || | ||||||  ||||    
T  30891349 catttccatcaaattggtccttgtacacgtggcttgtttgttgacacgtgtacaagacaagactacatgcagggtgacaaattataagcactaatagagc 30891250  T
Q  119 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgatt 209  Q
     ||||||||||||||| | |||| ||||||||||  ||||||||||||||||   |||||||||| |||| | |||  |||||| ||||||    
T  30891249 atttggacggagggactactttgttggacgtctgacaaattcagggactaaacgtatattttgcataatttaaggataaatttgaccgatt 30891159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 44 - 203
Target Start/End: Complemental strand, 2968340 - 2968180
Alignment:
Q  44 acacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttggacggagggaccattttga 142  Q
    |||||||||| |||| ||| |||| |||||||||| |||||||||||| | |||| |||| |||  ||||||||||   |  ||||| ||||| ||||||    
T  2968340 acacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgtcagcacggctaacggagcccgttaacggatggacctttttga 2968241  T
Q  143 tggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttgg 203  Q
    ||||||||||  ||||||||||| ||||| ||||||| ||| |||| ||||||||||||||    
T  2968240 tggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgg 2968180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 7371264 - 7371179
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| |||| |||||  ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  7371264 aaattcaaggacaaaatatctatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgaggtatt 7371179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 9400035 - 9400120
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||||| ||||||||| |||||||||| ||| ||||||| | ||||||| |||||||||||||||||||||||||||    
T  9400035 aaattcggggactaattagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtatt 9400120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 20525334 - 20525419
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| |||| |||||| |||||||||||||||||||| ||||||| || |||||| ||||||||| |||||||||||||||||    
T  20525334 aaattcaaggacaaaatagctattttgcaaaattcagggatgaatttgacctatttttaaaaattcaaagacgaatttgaggtatt 20525419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 29077546 - 29077338
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| || |||| || |||||||||| |||| ||| |||| ||||||||||||||| ||||||| | |||| |||| ||   ||||||||||   |  |    
T  29077546 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgacatgtcagcatggctaacggagcccgttaa 29077447  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaagga 225  Q
    |||||||||| ||||||||||||||||  |||||||||||  |||| || |||| ||| |||| |||||| |||||||||||    | |||||||| |||    
T  29077446 cggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggga 29077347  T
Q  226 cgaatttga 234  Q
    |||||||||    
T  29077346 cgaatttga 29077338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 207
Target Start/End: Original strand, 3018336 - 3018519
Alignment:
Q  25 ccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttg 123  Q
    ||||||| || |||| || ||| |||||| || | ||| |||| ||||||||||||||| ||||||| | || |  ||| ||   ||||||||||  |||    
T  3018336 ccatcaaattcgtccctgaacatgtggcttccgtcttgccacgcgtacaagacaacacatcatgcaagacgatagatcaacatggctaacggagcacttg 3018435  T
Q  124 gacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    || ||||||||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| ||||||||| ||||||||    
T  3018436 gatggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccga 3018519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 3480657 - 3480742
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||  | ||||||| | |||||||||||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  3480657 aaattcagggactagtttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatt 3480742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 6902906 - 6902982
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||  |||||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  6902906 ggactaaatagatattc-gcaaaatttagggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatt 6902982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 8605349 - 8605410
Alignment:
Q  179 ttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  8605349 ttgcaaaatttagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatt 8605410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 18645104 - 18645188
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| ||||||| | ||||||| ||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||||||    
T  18645104 aaattcatggactaatttgatatttcgcaaaattcagagacgaatt-gtccgatttttcaaaattcaaggacgaatttgaggtatt 18645188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 32454337 - 32454252
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||| ||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  32454337 aaattcagggactaatttgatatttcgaaaaattcaaggacgaaattggccgatttttcaaaattcaaggactattttgaggtatt 32454252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 24662683 - 24662615
Alignment:
Q  20 catttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatg 88  Q
    |||||||||||| || | ||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  24662683 catttccatcaaattggcccttgtacacgtgtcttccttgttgacacgtgtacaagacaacacaacatg 24662615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 207
Target Start/End: Complemental strand, 4641573 - 4641392
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaagga-cacgtcatcaccactaacggagcttttgga 125  Q
    ||||| || |||| || |||||||||| |||| ||| |||| |||||||||| |||| ||||||| | | || |||| ||   ||||||||||   |  |    
T  4641573 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggaaacatgtcagcatggctaacggagcccgttaa 4641474  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    |||||||||| |||||||||| |||||  ||||||||||| ||||| |||||||  || |||| ||||||||||||||||||    
T  4641473 cggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccga 4641392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 13610771 - 13610694
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||| | ||||||| ||||||||||||||| ||||||  |||||||| ||||||||||||||||||| |||||||    
T  13610771 ggactaatttgatatttcgcaaaattcagggacaaatttgatcgatttttcaaaattcaaggacgaatttaaggtatt 13610694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 165
Target Start/End: Original strand, 25172014 - 25172154
Alignment:
Q  26 catcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagcttttgg 124  Q
    |||||| || ||||||||||| ||| || |||||||||||||||||||||||||||  |||||||  |  |||  ||| ||  ||||| ||||| |||||    
T  25172014 catcaaattggtccttgtacatgtgacttccttgttgacacgtgtacaagacaacatgacatgcaggacaacaactcaacaatactaatggagcatttgg 25172113  T
Q  125 acggagggaccattttgatggacgtctgtaaaattcaggga 165  Q
    ||||| |||| ||||| |||||||| ||| |||||||||||    
T  25172114 acggaaggactatttttatggacgtttgttaaattcaggga 25172154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 32437208 - 32437144
Alignment:
Q  176 attttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||||| ||| |||||||||||||    
T  32437208 atttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacaaatttgaggtatt 32437144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 7051255 - 7051330
Alignment:
Q  165 actaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| ||||||||||| |||||||||| | |||||||||||||||||   ||||||| |||||||    
T  7051255 actaaatagatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaattcgaatttaaggtatt 7051330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 33276879 - 33276804
Alignment:
Q  166 ctaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattt 241  Q
    |||||||||||||| |||||||| ||  ||||||||| | |||||||||||||||||||||||| ||||| |||||    
T  33276879 ctaaatagatatttcgcaaaatttagaaacgaatttgactgattttttaaaattcaaggacgaagttgagttattt 33276804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 7049847 - 7049790
Alignment:
Q  183 aaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||||||||||||||||| ||||||| |||||||||||| ||||||||| ||||    
T  7049847 aaaattcagggacgaatttggctgatttttgaaaattcaaggaagaatttgagatatt 7049790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 21068706 - 21068629
Alignment:
Q  163 ggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||| | ||||||   ||||||||||| | |||| || |||||||||||||||||||||||||||    
T  21068706 ggactaaatagatatttcgtaaaatttgtggacgaatttgactgattgttgaaaattcaaggacgaatttgaggtatt 21068629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 207
Target Start/End: Complemental strand, 29112419 - 29112337
Alignment:
Q  125 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||||||||||||||  |||||||||||  |||| || |||| ||| |||| |||||| |||||||||||    
T  29112419 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccga 29112337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 17952029 - 17952129
Alignment:
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  ||||||||||||||||    
T  17952029 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 17952128  T
Q  207 a 207  Q
    |    
T  17952129 a 17952129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 11163982 - 11163875
Alignment:
Q  63 acacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattca 161  Q
    |||||||||||||||||||   ||||||  | ||||  ||| |||||||||||| || |||||||||| |||| | |||||| ||||| ||| |||||||    
T  11163982 acacgtgtacaagacaacaagccatgcaggaagacaactcagcaccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattca 11163883  T
Q  162 gggactaa 169  Q
    ||||||||    
T  11163882 gggactaa 11163875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 17951964 - 17952025
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| |||||||    
T  17951964 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacaca 17952025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 35175785 - 35175846
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 83  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| |||||||    
T  35175785 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacaca 35175846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 35175861 - 35175977
Alignment:
Q  118 cttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaa 217  Q
    ||||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  | ||||||||||||||||   | ||||    
T  35175861 cttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggagacgaatttggccgatccctgaaaa 35175960  T
Q  218 ttcaaggacgaatttga 234  Q
    |||||||||||| ||||    
T  35175961 ttcaaggacgaaattga 35175977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 21091153 - 21091110
Alignment:
Q  197 aatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||||  ||||||| |||||||||||||||||||||||||||    
T  21091153 aatttggttgatttttgaaaattcaaggacgaatttgaggtatt 21091110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 3456944 - 3456898
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctg 54  Q
    |||||| || || |||||||||| |||||||||||||||||||||||    
T  3456944 tcgaattttgacaatttccatcagtttagtccttgtacacgtggctg 3456898  T

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Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 31209070 - 31209016
Alignment:
Q  36 gtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca 90  Q
    ||||||||||||||||||| |||| |||||| ||||||| ||| ||||| |||||    
T  31209070 gtccttgtacacgtggctgacttgatgacacatgtacaacacatcacaatatgca 31209016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 32455832 - 32455865
Alignment:
Q  21 atttccatcaatttagtccttgtacacgtggctg 54  Q
    |||||||||| |||||||||||||||||||||||    
T  32455832 atttccatcagtttagtccttgtacacgtggctg 32455865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 17950650 - 17950598
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    ||||||||||| ||||| ||||||| ||| |||| ||||||||| ||||||||    
T  17950650 aaattcagggattaaattgatatttcgcataattgagggacgaagttggccga 17950598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 8504 - 8266
Alignment:
Q  1 ttaagtctcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacg 99  Q
    |||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||    
T  8504 ttaaatctcgaatttttaccatttccatcaatttagtacttgtacacgtggctgccttgttgacacgtgtacaagacaacacatcttgcaagaggacacg 8405  T
Q  100 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaat 199  Q
    ||||||||||||||| |||||||||||||| | ||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||| | ||||||    
T  8404 tcatcaccactaacgaagcttttggacggatgtaccattttgatggacgtat--aaaattcagggactaaatagatattttgcaaaattcaagaacgaat 8307  T
Q  200 ttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  8306 ttggccaattttttaaaattcaaggacgaatttgaggtatt 8266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 134; Significance: 8e-70; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 3531 - 3298
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||| ||||||| | ||||||| | | ||| |||||||    
T  3531 tcgaattttgaccatttccatcaatttagtctttgtacacgtggctgacttgctgacacatgtacaggacaacaaagcatgcaagaagccacatcatcac 3432  T
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
     | ||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||| || |||||||    
T  3431 tattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccg 3332  T
Q  207 attttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||||||||||||||||||||||||    
T  3331 atttttcaaaattcaaggacgaatttgaggtatt 3298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 4703 - 4470
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||| ||||||| | ||||||| | | ||| |||||||    
T  4703 tcgaattttgaccatttccatcaatttagtctttgtacacgtggctgacttgctgacacatgtacaggacaacaaagcatgcaagaagccacatcatcac 4604  T
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccg 206  Q
     | ||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||| || |||||||    
T  4603 tattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccg 4504  T
Q  207 attttttaaaattcaaggacgaatttgaggtatt 240  Q
    |||||| |||||||||||||||||||||||||||    
T  4503 atttttcaaaattcaaggacgaatttgaggtatt 4470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 14343 - 14428
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  14343 aaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 14428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 37441 - 37282
Alignment:
Q  8 tcgaatatttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcac 106  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| ||| | ||||  |||||||    
T  37441 tcgaatttttacaatttccatcaaattagtccttgtacacgtggttgccttgttgacacgtgtaaaggacaacacaacatacaagaagacatatcatcac 37342  T
Q  107 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    || |||||||| ||||||| ||||  ||||||||||| ||||||||||||||||| ||||    
T  37341 cattaacggagtttttggatggagaaaccattttgatagacgtctgtaaaattcatggac 37282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 1555 - 1640
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  1555 aaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtatt 1640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 207
Target Start/End: Original strand, 6540 - 6721
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaaag-gacacgtcatcaccactaacggagcttttgga 125  Q
    ||||| || |||| || |||||||||| |||| ||| |||| |||||||||| |||| ||||||| | |||| |||| ||   ||||||||||   |  |    
T  6540 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggtgacatgtcagcatggctaacggagcccgttaa 6639  T
Q  126 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagggacgaatttggccga 207  Q
    |||||||||| |||||||||| |||||  ||||||||||| ||||| |||||||  || |||| ||||||||||||||||||    
T  6640 cggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccga 6721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 4682 - 4537
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca-aaggacacgtcatcaccactaacggagctt 120  Q
    |||| ||||| || |||||||||||||||||| |||||| ||||||||||||||||||||   ||||||  | ||||  ||| || ||||||| || | |    
T  4682 tttcaatcaaattggtccttgtacacgtggcttccttgtagacacgtgtacaagacaacaagccatgcaggacgacaactcagcaacactaacagaacat 4583  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    ||||||||| |||| |||||||||||||| |||  |||||||||||    
T  4582 ttggacggaaggactattttgatggacgtttgttgaattcagggac 4537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 54258 - 54343
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | ||||||| | |||||||||||||||| ||| ||||||||| ||||||||||||| | |||||||||||    
T  54258 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtatt 54343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 1071 - 986
Alignment:
Q  155 aaattcagggactaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||  | ||||||| | | |||||||||||||| || |||||||||| ||||||||||||| | |||||||||||    
T  1071 aaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtatt 986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 436341 - 436272
Alignment:
Q  168 aaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggt 237  Q
    |||||||||||| |||||||| | ||| ||||||||| ||||||| |||||||||| |||||||||||||    
T  436341 aaatagatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgaggt 436272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 30372 - 30517
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagctt 120  Q
    |||| ||||| || ||| || |||||||| || |||||| ||||||||||||||||||||   ||||||  | ||||  | | || |||||||||||| |    
T  30372 tttcaatcaaattggtcattatacacgtgacttccttgtagacacgtgtacaagacaacaagccatgcaggaagacaactaaacagcactaacggagcat 30471  T
Q  121 ttggacggagggaccattttgatggacgtctgtaaaattcagggac 166  Q
    ||||||||| | || |||||||| ||||| ||| ||||||||||||    
T  30472 ttggacggaagaactattttgattgacgtttgttaaattcagggac 30517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 36792 - 36899
Alignment:
Q  63 acacgtgtacaagacaacacaacatgcaa-aggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattca 161  Q
    |||||||||||||||||||   ||||||  | ||||  ||| |||||||||||| || |||||||||| |||| | |||||| ||||| ||| |||||||    
T  36792 acacgtgtacaagacaacaagccatgcaggaagacaactcagcaccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattca 36891  T
Q  162 gggactaa 169  Q
    ||||||||    
T  36892 gggactaa 36899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 106747 - 106674
Alignment:
Q  165 actaaatagatattttgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatt 240  Q
    ||||||||||||||| | |||||||| |||| |||||||| ||||  |  ||||||||||||||||||||| ||||    
T  106747 actaaatagatatttcgtaaaattcatggacaaatttggctgattggt--aaattcaaggacgaatttgagatatt 106674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 15899 - 15953
Alignment:
Q  27 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 81  Q
    ||||| || ||||||||||||||| || |||||||||||| |||||||| |||||    
T  15899 atcaaattggtccttgtacacgtgacttccttgttgacacctgtacaaggcaaca 15953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 63753 - 63790
Alignment:
Q  192 ggacgaatttggccgattttttaaaattcaaggacgaa 229  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  63753 ggacgaacttggctgattttttaaaattcaaggacgaa 63790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 4750 - 4818
Alignment:
Q  22 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgca 90  Q
    |||||||||| || |||||||||||| ||||| | | | |||||||||| ||| ||| |||||||||||    
T  4750 tttccatcaaattggtccttgtacacatggcttcgtggatgacacgtgtgcaacacatcacaacatgca 4818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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