View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14800_high_14 (Length: 245)
Name: NF14800_high_14
Description: NF14800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14800_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 25584931 - 25584704
Alignment:
| Q |
1 |
tgaatatttaaatatgagattctagtattattaataaatagacatgaatatttgcattgcttctttaaatattgtaggtgggtgatttgaaatagaggat |
100 |
Q |
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| T |
25584931 |
tgaatatttaaatatgagattctagtattattaataaatagacatgaatatttgcattgcttctttaaatattgtaggtgggtgatttgaaatagaggat |
25584832 |
T |
|
| Q |
101 |
taattagctttaaaagcaatagtgtgttctcccatgctactatgctgtattgctattacaattgctctgaaagagtcttaaacaccgactcactcactct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25584831 |
taattagctttaaaagcaatagtgtgttctcccatgctactatgctgtattgctattacaattgctctgaaagagtcttaaacaccgactcactcactct |
25584732 |
T |
|
| Q |
201 |
tgtataaagcaatgaatgaaaagaaagg |
228 |
Q |
| |
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|||||||||||||||||||||||||||| |
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| T |
25584731 |
tgtataaagcaatgaatgaaaagaaagg |
25584704 |
T |
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