View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14803_high_1 (Length: 776)

Name: NF14803_high_1
Description: NF14803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14803_high_1
NF14803_high_1
[»] chr6 (32 HSPs)
chr6 (21-761)||(31490567-31491298)
chr6 (165-410)||(31497130-31497375)
chr6 (165-410)||(31491741-31491986)
chr6 (165-410)||(31502516-31502761)
chr6 (508-663)||(32251332-32251481)
chr6 (504-655)||(26539087-26539234)
chr6 (111-215)||(31491219-31491322)
chr6 (264-346)||(4621383-4621467)
chr6 (289-346)||(4109051-4109108)
chr6 (289-346)||(4896833-4896890)
chr6 (289-346)||(14832779-14832836)
chr6 (53-100)||(31491937-31491984)
chr6 (53-100)||(31497326-31497373)
chr6 (53-100)||(31502712-31502759)
chr6 (590-664)||(28998987-28999061)
chr6 (500-569)||(1661624-1661693)
chr6 (289-346)||(33320423-33320480)
chr6 (289-346)||(35159184-35159241)
chr6 (299-351)||(21855243-21855294)
chr6 (684-715)||(17467591-17467622)
chr6 (289-319)||(1222125-1222155)
chr6 (289-319)||(4109797-4109827)
chr6 (289-319)||(9735967-9735997)
chr6 (289-319)||(9978979-9979009)
chr6 (289-319)||(15044098-15044128)
chr6 (289-319)||(18320468-18320498)
chr6 (289-319)||(24447536-24447566)
chr6 (300-346)||(31426210-31426256)
chr6 (289-346)||(1220852-1220909)
chr6 (682-727)||(17398907-17398951)
chr6 (590-663)||(21427340-21427413)
chr6 (289-346)||(24446259-24446316)
[»] chr2 (40 HSPs)
chr2 (502-667)||(34512619-34512779)
chr2 (502-657)||(1729458-1729607)
chr2 (508-669)||(29260102-29260258)
chr2 (492-663)||(14120803-14120968)
chr2 (502-636)||(747498-747626)
chr2 (288-350)||(8909773-8909835)
chr2 (509-580)||(19851652-19851723)
chr2 (504-669)||(5671504-5671664)
chr2 (288-351)||(38329026-38329089)
chr2 (590-664)||(31911144-31911218)
chr2 (289-346)||(28608942-28608999)
chr2 (293-346)||(32676001-32676054)
chr2 (289-346)||(32676524-32676581)
chr2 (288-353)||(38328162-38328227)
chr2 (289-346)||(42781668-42781725)
chr2 (503-590)||(44588254-44588342)
chr2 (594-668)||(2209891-2209965)
chr2 (289-346)||(1513750-1513807)
chr2 (293-346)||(18091591-18091644)
chr2 (289-346)||(25235170-25235227)
chr2 (303-353)||(38328607-38328657)
chr2 (289-346)||(19485178-19485235)
chr2 (289-346)||(19487262-19487319)
chr2 (289-346)||(28609673-28609730)
chr2 (289-346)||(44940724-44940781)
chr2 (687-727)||(38763605-38763645)
chr2 (301-353)||(39087780-39087832)
chr2 (264-323)||(23456395-23456457)
chr2 (625-664)||(34220625-34220664)
chr2 (289-319)||(4289298-4289328)
chr2 (289-319)||(10875412-10875442)
chr2 (289-319)||(18090883-18090913)
chr2 (289-319)||(19488018-19488048)
chr2 (509-559)||(34334240-34334290)
chr2 (299-353)||(39087616-39087670)
chr2 (289-319)||(42782415-42782445)
chr2 (289-346)||(4290546-4290603)
chr2 (290-319)||(9542900-9542929)
chr2 (301-342)||(38328319-38328360)
chr2 (617-662)||(44588198-44588243)
[»] chr1 (45 HSPs)
chr1 (498-657)||(21268278-21268431)
chr1 (502-664)||(27934998-27935155)
chr1 (479-657)||(36596530-36596703)
chr1 (521-663)||(10832183-10832320)
chr1 (293-350)||(20089396-20089453)
chr1 (264-346)||(8256507-8256591)
chr1 (504-639)||(40289069-40289199)
chr1 (288-350)||(9754224-9754285)
chr1 (289-346)||(1827442-1827499)
chr1 (289-346)||(16301280-16301337)
chr1 (289-346)||(16301869-16301926)
chr1 (289-346)||(28572140-28572197)
chr1 (502-589)||(12381173-12381258)
chr1 (502-589)||(12385240-12385325)
chr1 (289-346)||(19321297-19321354)
chr1 (289-346)||(22198243-22198300)
chr1 (289-346)||(28950704-28950761)
chr1 (289-346)||(33074994-33075051)
chr1 (504-557)||(34429749-34429802)
chr1 (289-346)||(50562396-50562453)
chr1 (680-727)||(15444495-15444542)
chr1 (530-589)||(15444977-15445036)
chr1 (503-587)||(23328396-23328480)
chr1 (264-315)||(21056163-21056217)
chr1 (279-319)||(35598308-35598350)
chr1 (289-319)||(1828179-1828209)
chr1 (289-319)||(4893709-4893739)
chr1 (289-319)||(5428056-5428086)
chr1 (289-319)||(19320691-19320721)
chr1 (289-319)||(24289486-24289516)
chr1 (289-319)||(28572887-28572917)
chr1 (289-319)||(29184748-29184778)
chr1 (289-319)||(33363313-33363343)
chr1 (628-666)||(34644257-34644295)
chr1 (289-319)||(35599401-35599431)
chr1 (289-319)||(38896556-38896586)
chr1 (590-664)||(43168197-43168271)
chr1 (289-319)||(47136870-47136900)
chr1 (289-319)||(47137599-47137629)
chr1 (289-319)||(49586904-49586934)
chr1 (296-346)||(52311183-52311233)
chr1 (289-346)||(4892432-4892489)
chr1 (289-346)||(28571397-28571454)
chr1 (289-346)||(29185998-29186055)
chr1 (289-318)||(46624378-46624407)
[»] chr3 (52 HSPs)
chr3 (507-664)||(12060038-12060190)
chr3 (508-671)||(29213332-29213490)
chr3 (504-589)||(51877240-51877325)
chr3 (509-583)||(45503360-45503434)
chr3 (264-346)||(9373160-9373245)
chr3 (264-346)||(36006516-36006600)
chr3 (504-664)||(4298312-4298468)
chr3 (289-346)||(8527057-8527114)
chr3 (512-585)||(17073118-17073191)
chr3 (289-346)||(35855891-35855948)
chr3 (289-346)||(39093666-39093723)
chr3 (289-346)||(40821973-40822030)
chr3 (289-346)||(55293652-55293709)
chr3 (301-353)||(40822361-40822413)
chr3 (504-592)||(50420659-50420747)
chr3 (530-589)||(43451523-43451582)
chr3 (590-657)||(46298806-46298873)
chr3 (289-346)||(19368323-19368380)
chr3 (289-346)||(29529742-29529799)
chr3 (289-346)||(53801583-53801640)
chr3 (301-353)||(40822201-40822253)
chr3 (504-664)||(50673056-50673210)
chr3 (293-346)||(53522285-53522340)
chr3 (264-319)||(9373990-9374048)
chr3 (264-319)||(51656460-51656518)
chr3 (504-589)||(20256137-20256220)
chr3 (299-353)||(36946579-36946633)
chr3 (627-664)||(41998975-41999012)
chr3 (516-576)||(271228-271288)
chr3 (680-724)||(27151553-27151597)
chr3 (299-351)||(36946736-36946788)
chr3 (293-346)||(53521986-53522041)
chr3 (625-664)||(18766-18805)
chr3 (302-353)||(40822664-40822715)
chr3 (264-319)||(53521766-53521824)
chr3 (289-319)||(9374145-9374175)
chr3 (289-319)||(19361630-19361660)
chr3 (289-319)||(19893449-19893479)
chr3 (289-319)||(26101049-26101079)
chr3 (289-319)||(26101674-26101704)
chr3 (289-319)||(26776706-26776736)
chr3 (625-675)||(27863970-27864020)
chr3 (289-319)||(29529022-29529052)
chr3 (289-319)||(35860744-35860774)
chr3 (289-319)||(39094292-39094322)
chr3 (289-319)||(46489355-46489385)
chr3 (289-319)||(48519926-48519956)
chr3 (301-351)||(49067908-49067958)
chr3 (289-319)||(53802104-53802134)
chr3 (301-351)||(53927522-53927572)
chr3 (289-319)||(55290665-55290695)
chr3 (289-346)||(22521994-22522051)
[»] chr8 (54 HSPs)
chr8 (504-663)||(39972132-39972286)
chr8 (506-664)||(5074808-5074961)
chr8 (289-346)||(1944183-1944240)
chr8 (293-350)||(18493154-18493211)
chr8 (289-346)||(7390311-7390368)
chr8 (289-346)||(8161389-8161446)
chr8 (289-346)||(8762007-8762064)
chr8 (289-346)||(25834988-25835045)
chr8 (289-346)||(41978586-41978643)
chr8 (498-589)||(43285171-43285265)
chr8 (507-589)||(13520595-13520678)
chr8 (507-589)||(13610130-13610213)
chr8 (289-346)||(4465342-4465399)
chr8 (289-346)||(12761231-12761288)
chr8 (289-346)||(32845570-32845627)
chr8 (289-342)||(41157652-41157705)
chr8 (289-346)||(41532704-41532761)
chr8 (289-346)||(44381657-44381714)
chr8 (299-353)||(41843974-41844028)
chr8 (299-353)||(41844173-41844227)
chr8 (289-346)||(36777582-36777639)
chr8 (502-566)||(20164067-20164131)
chr8 (504-571)||(5300198-5300265)
chr8 (504-554)||(22575765-22575816)
chr8 (604-663)||(39491792-39491851)
chr8 (289-319)||(1944929-1944959)
chr8 (289-319)||(4464625-4464655)
chr8 (289-319)||(7391059-7391089)
chr8 (289-319)||(8160688-8160718)
chr8 (289-319)||(8762754-8762784)
chr8 (289-319)||(9473864-9473894)
chr8 (301-351)||(16913968-16914018)
chr8 (289-319)||(18375828-18375858)
chr8 (289-319)||(25361256-25361286)
chr8 (289-319)||(25618770-25618800)
chr8 (289-319)||(25834268-25834298)
chr8 (289-319)||(32846937-32846967)
chr8 (264-346)||(34894787-34894872)
chr8 (289-319)||(36778221-36778251)
chr8 (289-319)||(37588391-37588421)
chr8 (289-319)||(38295360-38295390)
chr8 (289-319)||(40586712-40586742)
chr8 (289-319)||(44380983-44381013)
chr8 (289-346)||(1943440-1943497)
chr8 (690-727)||(7672363-7672400)
chr8 (289-346)||(8162132-8162189)
chr8 (289-346)||(8761375-8761432)
chr8 (289-346)||(9473226-9473283)
chr8 (682-727)||(11649665-11649710)
chr8 (289-346)||(25835620-25835677)
chr8 (289-346)||(32846203-32846260)
chr8 (496-589)||(35237019-35237112)
chr8 (682-723)||(35894937-35894978)
chr8 (293-346)||(44428484-44428537)
[»] chr4 (58 HSPs)
chr4 (505-663)||(39418098-39418251)
chr4 (516-663)||(49483084-49483226)
chr4 (288-350)||(48808410-48808472)
chr4 (590-663)||(11996084-11996156)
chr4 (289-346)||(39404849-39404906)
chr4 (289-346)||(8988195-8988252)
chr4 (289-346)||(20590060-20590117)
chr4 (289-346)||(24548411-24548468)
chr4 (289-346)||(24944911-24944968)
chr4 (289-346)||(24947627-24947684)
chr4 (289-346)||(37351095-37351152)
chr4 (590-663)||(44478757-44478830)
chr4 (289-346)||(46105263-46105320)
chr4 (264-346)||(26603434-26603519)
chr4 (289-346)||(2117188-2117245)
chr4 (289-346)||(8531954-8532011)
chr4 (289-346)||(24944391-24944448)
chr4 (541-664)||(2940218-2940336)
chr4 (620-666)||(30618035-30618081)
chr4 (289-346)||(3758376-3758433)
chr4 (289-346)||(52801356-52801413)
chr4 (293-346)||(8120279-8120334)
chr4 (521-657)||(10567265-10567396)
chr4 (621-665)||(32884966-32885010)
chr4 (299-351)||(54242843-54242895)
chr4 (680-727)||(11024907-11024954)
chr4 (509-552)||(15986246-15986289)
chr4 (680-727)||(23915447-23915494)
chr4 (264-319)||(26602679-26602737)
chr4 (289-319)||(2117931-2117961)
chr4 (289-319)||(3759021-3759051)
chr4 (289-319)||(8964575-8964605)
chr4 (289-319)||(8988942-8988972)
chr4 (289-319)||(9887555-9887585)
chr4 (289-319)||(12680905-12680935)
chr4 (289-319)||(13172690-13172720)
chr4 (289-319)||(17741404-17741434)
chr4 (590-664)||(22376310-22376384)
chr4 (289-319)||(24549164-24549194)
chr4 (289-319)||(36742070-36742100)
chr4 (289-319)||(37351842-37351872)
chr4 (289-319)||(37356741-37356771)
chr4 (289-319)||(39405605-39405635)
chr4 (289-319)||(39713766-39713796)
chr4 (289-319)||(46106163-46106193)
chr4 (289-319)||(50043078-50043108)
chr4 (289-319)||(52802675-52802705)
chr4 (289-346)||(8987563-8987620)
chr4 (293-346)||(16904715-16904768)
chr4 (293-350)||(24389996-24390053)
chr4 (289-346)||(37350463-37350520)
chr4 (289-346)||(39714418-39714475)
chr4 (289-346)||(42348242-42348299)
chr4 (289-346)||(42348522-42348579)
chr4 (627-668)||(45684050-45684091)
chr4 (289-346)||(46419620-46419676)
chr4 (293-346)||(47556300-47556353)
chr4 (682-727)||(50443044-50443089)
[»] chr7 (45 HSPs)
chr7 (590-664)||(37848304-37848378)
chr7 (520-639)||(27236813-27236927)
chr7 (507-589)||(5543024-5543106)
chr7 (289-346)||(24683268-24683325)
chr7 (301-355)||(15236513-15236567)
chr7 (682-727)||(4088192-4088237)
chr7 (289-346)||(9150638-9150695)
chr7 (289-346)||(29468440-29468497)
chr7 (289-346)||(35156370-35156427)
chr7 (289-346)||(44805571-44805628)
chr7 (289-346)||(49145022-49145079)
chr7 (625-664)||(9887238-9887277)
chr7 (680-727)||(15464742-15464789)
chr7 (680-727)||(48856031-48856078)
chr7 (530-664)||(41084799-41084928)
chr7 (289-346)||(7855962-7856019)
chr7 (293-346)||(33637645-33637698)
chr7 (502-566)||(44376904-44376968)
chr7 (502-566)||(44385771-44385835)
chr7 (680-727)||(762221-762268)
chr7 (621-664)||(33293787-33293830)
chr7 (675-710)||(44433956-44433991)
chr7 (506-589)||(49045262-49045345)
chr7 (301-351)||(2734357-2734407)
chr7 (289-323)||(4849445-4849479)
chr7 (289-319)||(4850189-4850219)
chr7 (289-319)||(7855234-7855264)
chr7 (289-319)||(17172635-17172665)
chr7 (289-319)||(21669502-21669532)
chr7 (289-319)||(24682562-24682592)
chr7 (289-319)||(27733224-27733254)
chr7 (301-351)||(34406568-34406618)
chr7 (289-319)||(35155759-35155789)
chr7 (503-545)||(37848419-37848461)
chr7 (289-319)||(39277991-39278021)
chr7 (289-319)||(39648252-39648282)
chr7 (689-723)||(41499076-41499110)
chr7 (289-319)||(44806319-44806349)
chr7 (289-319)||(48527682-48527712)
chr7 (289-319)||(49144305-49144335)
chr7 (289-346)||(49145150-49145210)
chr7 (301-342)||(2733600-2733641)
chr7 (289-346)||(17171358-17171415)
chr7 (289-346)||(24684011-24684068)
chr7 (301-342)||(34406311-34406352)
[»] scaffold0432 (1 HSPs)
scaffold0432 (288-350)||(5489-5551)
[»] chr5 (48 HSPs)
chr5 (536-648)||(24288494-24288601)
chr5 (536-648)||(24373620-24373727)
chr5 (547-669)||(12349520-12349635)
chr5 (289-346)||(753060-753117)
chr5 (288-353)||(38096794-38096859)
chr5 (289-346)||(43137265-43137322)
chr5 (552-660)||(41871856-41871964)
chr5 (288-351)||(38096648-38096711)
chr5 (289-346)||(2181841-2181898)
chr5 (289-346)||(2182580-2182637)
chr5 (289-346)||(3087413-3087470)
chr5 (289-346)||(12419437-12419493)
chr5 (289-346)||(26601541-26601598)
chr5 (299-351)||(38096953-38097005)
chr5 (293-344)||(34726256-34726307)
chr5 (521-591)||(2970122-2970192)
chr5 (522-560)||(24012579-24012617)
chr5 (293-346)||(6304053-6304106)
chr5 (289-346)||(36885773-36885830)
chr5 (289-346)||(42976900-42976957)
chr5 (504-560)||(12349660-12349716)
chr5 (301-353)||(35394108-35394160)
chr5 (509-664)||(678430-678580)
chr5 (264-319)||(3086692-3086750)
chr5 (680-727)||(9637876-9637923)
chr5 (301-355)||(17547565-17547620)
chr5 (291-346)||(33705632-33705687)
chr5 (288-351)||(35393461-35393524)
chr5 (264-319)||(38937380-38937438)
chr5 (289-319)||(752340-752370)
chr5 (289-319)||(16679690-16679720)
chr5 (289-319)||(17636956-17636986)
chr5 (289-319)||(25695808-25695838)
chr5 (289-319)||(30181152-30181182)
chr5 (289-319)||(33705026-33705056)
chr5 (289-319)||(34719199-34719229)
chr5 (289-319)||(34725530-34725560)
chr5 (301-351)||(35394267-35394317)
chr5 (289-319)||(36885051-36885081)
chr5 (289-319)||(41692883-41692913)
chr5 (289-319)||(42975660-42975690)
chr5 (289-319)||(42976291-42976321)
chr5 (289-319)||(43136545-43136575)
chr5 (289-346)||(753803-753860)
chr5 (289-346)||(6304797-6304854)
chr5 (289-346)||(17637685-17637741)
chr5 (289-346)||(34717922-34717979)
chr5 (289-346)||(43137897-43137954)
[»] scaffold2127 (1 HSPs)
scaffold2127 (289-346)||(698-755)
[»] scaffold0032 (2 HSPs)
scaffold0032 (289-346)||(3826-3883)
scaffold0032 (289-319)||(3115-3145)
[»] scaffold0009 (2 HSPs)
scaffold0009 (289-346)||(232305-232362)
scaffold0009 (294-346)||(232944-232996)
[»] scaffold0246 (1 HSPs)
scaffold0246 (299-353)||(9624-9678)
[»] scaffold0090 (4 HSPs)
scaffold0090 (301-342)||(14026-14067)
scaffold0090 (301-353)||(13407-13459)
scaffold0090 (301-351)||(13569-13619)
scaffold0090 (301-351)||(13717-13767)
[»] scaffold0079 (2 HSPs)
scaffold0079 (289-346)||(9585-9642)
scaffold0079 (289-319)||(8861-8891)
[»] scaffold0021 (1 HSPs)
scaffold0021 (680-727)||(126228-126275)
[»] scaffold0381 (1 HSPs)
scaffold0381 (289-319)||(10959-10989)
[»] scaffold0230 (1 HSPs)
scaffold0230 (289-319)||(26297-26327)
[»] scaffold0115 (1 HSPs)
scaffold0115 (289-319)||(14753-14783)
[»] scaffold0069 (1 HSPs)
scaffold0069 (289-319)||(14389-14419)
[»] scaffold0057 (2 HSPs)
scaffold0057 (289-319)||(17672-17702)
scaffold0057 (289-346)||(18278-18335)
[»] scaffold0051 (1 HSPs)
scaffold0051 (289-319)||(55300-55330)
[»] scaffold0891 (1 HSPs)
scaffold0891 (301-342)||(2059-2100)


Alignment Details
Target: chr6 (Bit Score: 552; Significance: 0; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 552; E-Value: 0
Query Start/End: Original strand, 21 - 761
Target Start/End: Complemental strand, 31491298 - 31490567
Alignment:
Q  21 aaaacaacaatttaattattatgcatgcaacctaatattaatttattgattaattatttggataagcttgaatcgaatttgctttccataaaaattggag 120  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31491298 aaaaaaacgatttaattattatgcatgcaacctaatattaatttgttgattaattatttggataagcttgaatcaaatttgctttccataaaaattggag 31491199  T
Q  121 atttccataagctgnnnnnnncgatttaattattatgcatggaacttaatattaatttgttagattaattatttagataagcatgaatcaaatttaccaa 220  Q
    ||||||||||||||       |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||    
T  31491198 atttccataagctgaaaaaaacgatttaattattatgcatggaacttaatattaatttgtt-gattaattatttagataagcatgaatcgaatttaacaa 31491100  T
Q  221 gcatttaatatttcatgcaaataattaggaaataatttaagacatttgtttattttgctttcataacataacattttgattaaattaaatagggttaatt 320  Q
     |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||         |    
T  31491099 acatttaatatttcatgaaaataattaggaaataatttaagagatttgtttattttgctttcataacataacattttgattaaattaaat---------t 31491009  T
Q  321 aaacaggagtaatacagtaaaattaatcatagattctgcatgcagttaaaccctaatagatcccctatttgactcaataaagacttttaacnnnnnnna- 419  Q
    ||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||  ||| ||||||||||||||||||||||||       |     
T  31491008 aaataggagtaatacagtaaaattaatcatagattctccatgcatttaaaccctaatagatgtcctgtttgactcaataaagacttttaactttttttaa 31490909  T
Q  420 ttccatatactctctcgatagatatcatatttgaattttacatggttattatagaatgagttaggctaatttgtgtctttaagacactagttaaggaaac 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31490908 ttccatatactctctcgatagatatcatatttgaattttacatggttattatagaacgagttaggctaatttgtgtctttaagacactagttaaggaaac 31490809  T
Q  520 taaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaatacatcctttttaa 619  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| |||||||||| |||||||    
T  31490808 taaaaatagtaagtttgtattgaattcaacaattttttaactttttaaaaattaaatctatcacttttcatttcaccatttcccaatacatcatttttaa 31490709  T
Q  620 gtttgtcctcttaaccaatgtcctaagggcactctttaacatttctcttaaagaaataattgattaatagtgttgattttaatgataaaatgtgttttat 719  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31490708 gtttgtcctcttaaccaatgtcctaagggcactctttaacatttctcttaaagaaataattgattaatagtgttgattttaatgataaaatgtgttttat 31490609  T
Q  720 ttactaaatataatgtttacacaataaagactttctattatt 761  Q
    |||||||||| ||||| ||||||||||||| |||||||||||    
T  31490608 ttactaaataaaatgtgtacacaataaagattttctattatt 31490567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 165 - 410
Target Start/End: Complemental strand, 31497375 - 31497130
Alignment:
Q  165 cttaatattaatttgttagattaattatttagataagcatgaatcaaatttaccaagcatttaatatttcatgcaaataattaggaaataatttaagaca 264  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31497375 cttaatattaatttgtt-gattaattatttagataagcatgaatcgaatttaccaagcatttaatatttcatgcaaataattaggaaataatttaagaga 31497277  T
Q  265 tttgtttattttgcttt-cataacataacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcatagattctgcatgc 363  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||    
T  31497276 tttgtttattttgctttgcataacataacattttgattaaattaaatagggttaattaaataggagtaatacagttaaattaatcatagattatgcatgc 31497177  T
Q  364 agttaaaccctaatagatcccctatttgactcaataaagacttttaa 410  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||    
T  31497176 atttaaaccctaatagatgccctatttgactcaataaagacttttaa 31497130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 165 - 410
Target Start/End: Complemental strand, 31491986 - 31491741
Alignment:
Q  165 cttaatattaatttgttagattaattatttagataagcatgaatcaaatttaccaagcatttaatatttcatgcaaataattaggaaataatttaagaca 264  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31491986 cttaatattaatttgtt-gattaattatttagataagcatgaatcgaatttaccaagcatttaatatttcatgcaaataattaggaaataatttaagaga 31491888  T
Q  265 tttgtttattttgctttc-ataacataacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcatagattctgcatgc 363  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  31491887 tttgtttattttgctttccataacataatattttggttaaattaaatagggttaattaaataggagtaatacagttaaattaatcatagattctgcatgc 31491788  T
Q  364 agttaaaccctaatagatcccctatttgactcaataaagacttttaa 410  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||    
T  31491787 atttaaaccctaatagatgccctatttgactcaataaagacttttaa 31491741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 165 - 410
Target Start/End: Complemental strand, 31502761 - 31502516
Alignment:
Q  165 cttaatattaatttgttagattaattatttagataagcatgaatcaaatttaccaagcatttaatatttcatgcaaataattaggaaataatttaagaca 264  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31502761 cttaatattaatttgtt-gattaattatttagataagcatgaatcgaatttaccaagcatttaatatttcatgcaaataattaggaaataatttaagaga 31502663  T
Q  265 tttgtttattttgcttt-cataacataacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcatagattctgcatgc 363  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||| |||||||    
T  31502662 tttgtttattttgctttgcataacataacattttgattaaattaaatagggttaattaaatacgagtaatacagtaaaagtaatcatagattatgcatgc 31502563  T
Q  364 agttaaaccctaatagatcccctatttgactcaataaagacttttaa 410  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||    
T  31502562 atttaaaccctaatagatgccctatttgactcaataaagacttttaa 31502516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 508 - 663
Target Start/End: Original strand, 32251332 - 32251481
Alignment:
Q  508 agttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaata 607  Q
    |||||||||||| |||||||| | |||||||||||||||||||||||||||| ||||||||| ||| ||| || |||     ||||||||||| ||||||    
T  32251332 agttaaggaaacaaaaaatagtaggtttgtattgaattcaacaattttttaa-cttttaaaagtcagatccatcact-----tttcaccatttaccaata 32251425  T
Q  608 catcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacattt 663  Q
    || |  || |||||||||| |||||||||||| | |||||||||||||||||||||    
T  32251426 caacacttctaagtttgtcttcttaaccaatgccataagggcactctttaacattt 32251481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 504 - 655
Target Start/End: Original strand, 26539087 - 26539234
Alignment:
Q  504 cactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaa-tcaaatctattacttttcatttcaccattttc 602  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |  ||||||||| |||||||||| | |||||||     ||||||     
T  26539087 cactagttaaggaaactaaaaatagtaagtttgcattgaattcaacaatttttttaatttttaaaaagtcaaatctatcaattttcat-----cattttt 26539181  T
Q  603 caatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctt 655  Q
    |||||||   ||| ||||||||| |||||||| |||| ||||| |||||||||    
T  26539182 caatacaatatttctaagtttgttctcttaactaatgccctaaaggcactctt 26539234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 31491322 - 31491219
Alignment:
Q  111 aaaattggagatttccataagctgnnnnnnncgatttaattattatgcatggaacttaatattaatttgttagattaattatttagataagcatgaatca 210  Q
    ||||||||||||||||||||||||       |||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||||| |||||||    
T  31491322 aaaattggagatttccataagctgaaaaaaacgatttaattattatgcatgcaacctaatattaatttgtt-gattaattatttggataagcttgaatca 31491224  T
Q  211 aattt 215  Q
    |||||    
T  31491223 aattt 31491219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 4621467 - 4621383
Alignment:
Q  264 atttgtttattttgctttc-ataaca--taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||||| |||| ||||||  ||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||||||    
T  4621467 atttgtttattttgatttccataacaattaatattttgattaaattaaatagggttaattaaatagg-gtaatatagtaaaattaa 4621383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 4109051 - 4109108
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  4109051 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 4109108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 4896890 - 4896833
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||||| |||||||||||    
T  4896890 taacattttgattaaattaaacagggttaattaaatagggttaatatagtaaaattaa 4896833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 14832779 - 14832836
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||||| |||||||||||    
T  14832779 taacattttgattaaattaaacagggttaattaaatagggttaatatagtaaaattaa 14832836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 31491984 - 31491937
Alignment:
Q  53 taatattaatttattgattaattatttggataagcttgaatcgaattt 100  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  31491984 taatattaatttgttgattaattatttagataagcatgaatcgaattt 31491937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 31497373 - 31497326
Alignment:
Q  53 taatattaatttattgattaattatttggataagcttgaatcgaattt 100  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  31497373 taatattaatttgttgattaattatttagataagcatgaatcgaattt 31497326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 31502759 - 31502712
Alignment:
Q  53 taatattaatttattgattaattatttggataagcttgaatcgaattt 100  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  31502759 taatattaatttgttgattaattatttagataagcatgaatcgaattt 31502712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 590 - 664
Target Start/End: Original strand, 28998987 - 28999061
Alignment:
Q  590 tttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    |||||||||||||||||||||  ||| ||  ||  | ||||||| |||||||||||||||||||||| |||||||    
T  28998987 tttcaccattttccaatacattttttctattttaattctcttaatcaatgtcctaagggcactctttgacatttc 28999061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 500 - 569
Target Start/End: Complemental strand, 1661693 - 1661624
Alignment:
Q  500 aagacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaa 569  Q
    ||||||||||||||  ||||||||||| | |||||| |||||||||||  ||||||||||  ||||||||    
T  1661693 aagacactagttaaaaaaactaaaaatggtaagtttatattgaattcagtaattttttaattttttaaaa 1661624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 33320480 - 33320423
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| || |||||||||| |||   ||||||||||||||||    
T  33320480 taacattttgattaaattaaacagagttaattaaatagggtcaatacagtaaaattaa 33320423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 35159184 - 35159241
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| || || ||||||| |||  |||||||||||||||||    
T  35159184 taacattttgattaaattaaacagagtaaattaaatagggttaatacagtaaaattaa 35159241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 21855243 - 21855294
Alignment:
Q  299 attaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  21855243 attaaattaaataggtttaattaaacagg-gtaatacagtaaaagtaagcata 21855294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 715
Target Start/End: Complemental strand, 17467622 - 17467591
Alignment:
Q  684 taatagtgttgattttaatgataaaatgtgtt 715  Q
    ||||||||||||||||||||||||||||||||    
T  17467622 taatagtgttgattttaatgataaaatgtgtt 17467591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 1222125 - 1222155
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  1222125 taacattttgattaaattaaatagggttaat 1222155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 4109797 - 4109827
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  4109797 taacattttgattaaattaaatagggttaat 4109827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 9735997 - 9735967
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  9735997 taacattttgattaaattaaatagggttaat 9735967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 9979009 - 9978979
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  9979009 taacattttgattaaattaaatagggttaat 9978979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 15044128 - 15044098
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  15044128 taacattttgattaaattaaatagggttaat 15044098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 18320468 - 18320498
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  18320468 taacattttgattaaattaaatagggttaat 18320498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 24447536 - 24447566
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  24447536 taacattttgattaaattaaatagggttaat 24447566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 346
Target Start/End: Original strand, 31426210 - 31426256
Alignment:
Q  300 ttaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||||||||||||||| | || ||||| |||||||||||    
T  31426210 ttaaattaaatagggttaattaaatatgattaatatagtaaaattaa 31426256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 1220852 - 1220909
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||  |||||||||| ||| ||||||||| |||  |||||||||||||||||    
T  1220852 taacattttatttaaattaaacaggattaattaaatagggttaatacagtaaaattaa 1220909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 682 - 727
Target Start/End: Original strand, 17398907 - 17398951
Alignment:
Q  682 attaatagtgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  17398907 attaatagtgt-gattttaatgataaaatatgtttcatttactaaa 17398951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 663
Target Start/End: Original strand, 21427340 - 21427413
Alignment:
Q  590 tttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacattt 663  Q
    |||||| |||| |||||||||| ||| ||| ||||| ||||||||||||||| | |||||| || |||| ||||    
T  21427340 tttcactatttcccaatacatcatttataaatttgttctcttaaccaatgtcttgagggcaatccttaatattt 21427413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 24446259 - 24446316
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||  |||||||||| ||| ||||||||| |||  |||||||||||||||||    
T  24446259 taacattttatttaaattaaacaggattaattaaatagggttaatacagtaaaattaa 24446316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 2e-45; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 502 - 667
Target Start/End: Original strand, 34512619 - 34512779
Alignment:
Q  502 gacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccatttt 601  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||| ||| |||| |||||||||| |||     ||||||||||||    
T  34512619 gacactagttaagaaaactaaaaatagtaagtttgtattgaatttaacaattttttaacttttaaaaagtcaaatctatcact-----tttcaccatttt 34512713  T
Q  602 ccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttctct 667  Q
    | |||||| | ||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  34512714 ctaatacaacatttctaaatttgtcctcttaaccaatgtcataagggcactctttaacatttctct 34512779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 502 - 657
Target Start/End: Original strand, 1729458 - 1729607
Alignment:
Q  502 gacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccatttt 601  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||| ||||| ||| |||||||||| | |     ||||||||||||    
T  1729458 gacactggttaaggaaactaaaaatattaagcttgtattgaattcaacaattttttaa-cttttcaaagtcaaatctatcatt-----tttcaccatttt 1729551  T
Q  602 ccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactcttta 657  Q
     ||||||| | ||| ||||||||||||||||||||||| |||||| ||||||||||    
T  1729552 tcaatacaacatttctaagtttgtcctcttaaccaatgccctaagagcactcttta 1729607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 508 - 669
Target Start/End: Complemental strand, 29260258 - 29260102
Alignment:
Q  508 agttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaata 607  Q
    |||||||||||| ||||||   ||||| | ||||||||||||||||||||||| |||||||| |||||||||| |||     ||||||||||||||| ||    
T  29260258 agttaaggaaaccaaaaatgataagttcgcattgaattcaacaattttttaactttttaaaagtcaaatctatcact-----tttcaccattttccagta 29260164  T
Q  608 catcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttctctta 669  Q
    || | ||| ||| |||||| ||||||| |||||| ||||| ||||||||| |||||||||||    
T  29260163 caacatttctaattttgtcttcttaacaaatgtcttaaggacactctttagcatttctctta 29260102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 492 - 663
Target Start/End: Complemental strand, 14120968 - 14120803
Alignment:
Q  492 gtgtctttaagacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatc-aaatctattacttttcat 590  Q
    ||||||| | |||| |||||||||||||||||||| | || ||| ||||||||| ||||||||||||| || ||||||| | |||||||| |||     |    
T  14120968 gtgtcttaaggacattagttaaggaaactaaaaatggtaaatttatattgaatttaacaattttttaa-ctattaaaaagctaaatctatcact-----t 14120875  T
Q  591 ttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacattt 663  Q
    ||||||||||| ||||||| | ||||||| |||||||||||||||||||   |||||||||||||||||||||    
T  14120874 ttcaccatttt-caatacaacatttttaaatttgtcctcttaaccaatgctttaagggcactctttaacattt 14120803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 502 - 636
Target Start/End: Complemental strand, 747626 - 747498
Alignment:
Q  502 gacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccatttt 601  Q
    ||||| |||||||||||||||||| || ||||| | ||||||||||||||||||||||| ||| |||| | |||||||| |||||||| |     |||||    
T  747626 gacaccagttaaggaaactaaaaa-agtaagttggcattgaattcaacaattttttaacttttaaaaagttaaatctatcacttttcact-----atttt 747533  T
Q  602 ccaatacatcctttttaagtttgtcctcttaacca 636  Q
    |||||||| | ||| ||||||||||||||||||||    
T  747532 ccaatacaacatttctaagtttgtcctcttaacca 747498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 288 - 350
Target Start/End: Original strand, 8909773 - 8909835
Alignment:
Q  288 ataacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcat 350  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  8909773 ataacattttgattaaattaaatagggttaattaaataggggtaatacaataaaattaatcat 8909835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 509 - 580
Target Start/End: Original strand, 19851652 - 19851723
Alignment:
Q  509 gttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctat 580  Q
    ||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  19851652 gttaaggaaaccaaaacaagaaagtttgtattgaattcaacaattttttaacttttaaaaagtcaaatctat 19851723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 504 - 669
Target Start/End: Original strand, 5671504 - 5671664
Alignment:
Q  504 cactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttcc 603  Q
    |||||||||||||||  |||||| | ||||||| ||| ||||||| ||||||||||| |||||||| |||||||||| |||||||     |||||||  |    
T  5671504 cactagttaaggaaataaaaaatggtaagtttgcattcaattcaagaattttttaactttttaaaagtcaaatctatcacttttc-----accatttctc 5671598  T
Q  604 aatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttctctta 669  Q
    |||| | | ||| ||| ||| || |||||| ||||| ||||||  |||||||||| ||||| ||||    
T  5671599 aataaaacatttctaattttatcttcttaatcaatgccctaagaacactctttaatatttccctta 5671664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 288 - 351
Target Start/End: Complemental strand, 38329089 - 38329026
Alignment:
Q  288 ataacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  38329089 ataagattttgattaaattaaataggtttaattaaacaggggtaatacagtaaaagtaagcata 38329026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 590 - 664
Target Start/End: Complemental strand, 31911218 - 31911144
Alignment:
Q  590 tttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    ||||||||||||||||||||   ||||||||||||||||||| ||||||| | ||||| | ||||||||||||||    
T  31911218 tttcaccattttccaatacaatatttttaagtttgtcctcttgaccaatgccataaggtctctctttaacatttc 31911144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 28608942 - 28608999
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  28608942 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 28608999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 32676054 - 32676001
Alignment:
Q  293 attttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  32676054 attttgattaaattaaatagggtttattaaataggggtaatacagtaaaattaa 32676001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 32676581 - 32676524
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  32676581 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 32676524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 288 - 353
Target Start/End: Complemental strand, 38328227 - 38328162
Alignment:
Q  288 ataacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||| ||||||    
T  38328227 ataagattttgattaaattaaataggtttaattaaacaggggtaatacagtgaaagtaagcataga 38328162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 42781668 - 42781725
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| ||||||||||||| |||| |||||||||||||||||    
T  42781668 taacattttgatcaaattaaacagggttaattaaataggattaatacagtaaaattaa 42781725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 503 - 590
Target Start/End: Complemental strand, 44588342 - 44588254
Alignment:
Q  503 acactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaa-tcaaatctattacttttcat 590  Q
    ||||| |||| |||||| |||||||| ||||||||||| ||||||||||||||||||| ||| |||||  ||||| ||| |||||||||    
T  44588342 acacttgttatggaaacaaaaaatagtaagtttgtattaaattcaacaattttttaacatttaaaaaagacaaatatatcacttttcat 44588254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 668
Target Start/End: Complemental strand, 2209965 - 2209891
Alignment:
Q  594 accattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttctctt 668  Q
    |||||||||||||||||  ||||||  ||  | |||||||||||||||| ||| |||||||||||||||||||||    
T  2209965 accattttccaatacattttttttattttaattctcttaaccaatgtcccaagagcactctttaacatttctctt 2209891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 1513807 - 1513750
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| | ||||||||||| |||  |||||||||||||||||    
T  1513807 taacattttgattaaattaaacatggttaattaaatagggttaatacagtaaaattaa 1513750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 18091644 - 18091591
Alignment:
Q  293 attttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  18091644 attttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 18091591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 25235227 - 25235170
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||||||||||| |||||||||||||| |||  ||||| |||||||||||    
T  25235227 taacattttgattaaattaagtagggttaattaaatagggttaatatagtaaaattaa 25235170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 38328657 - 38328607
Alignment:
Q  303 aattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||| ||||||    
T  38328657 aattaaataggtttaattaaacaggggtaatacagtaaaagtaagcataga 38328607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 19485235 - 19485178
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| | ||||||||||| |||  |||||||||||||||||    
T  19485235 taacattttgatcaaattaaacatggttaattaaatagggttaatacagtaaaattaa 19485178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 19487262 - 19487319
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| |||||| |||||| |||  |||||||||||||||||    
T  19487262 taacattttgatcaaattaaacagggttgattaaatagggttaatacagtaaaattaa 19487319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 28609673 - 28609730
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| |||| |||||||| |||  ||||| |||||||||||    
T  28609673 taacattttgattaaattaaacagggataattaaatagggttaatatagtaaaattaa 28609730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 44940781 - 44940724
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||||| ||||||||||| |||  |||||  ||||||||||    
T  44940781 taacattttgattaaattaaataaggttaattaaatagggttaatatcgtaaaattaa 44940724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 687 - 727
Target Start/End: Complemental strand, 38763645 - 38763605
Alignment:
Q  687 tagtgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  38763645 tagtgttgattttaatggtaaaatgtgtttcatttactaaa 38763605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 39087780 - 39087832
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    ||||||||||||| ||||||||| ||| |||||||||||||| ||| ||||||    
T  39087780 taaattaaataggtttaattaaataggggtaatacagtaaaagtaagcataga 39087832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 23456395 - 23456457
Alignment:
Q  264 atttgtttattttgctttc-ataaca--taacattttgattaaattaaatagggttaattaaa 323  Q
    |||||||||||||| |||| ||||||  ||||||||||||||||||||||| | |||||||||    
T  23456395 atttgtttattttgatttccataacaattaacattttgattaaattaaatatgattaattaaa 23456457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 625 - 664
Target Start/End: Complemental strand, 34220664 - 34220625
Alignment:
Q  625 tcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  34220664 tcctcttaaccaatgtcttaagggcacactttaacatttc 34220625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 4289328 - 4289298
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  4289328 taacattttgattaaattaaatagggttaat 4289298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 10875442 - 10875412
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  10875442 taacattttgattaaattaaatagggttaat 10875412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 18090913 - 18090883
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  18090913 taacattttgattaaattaaatagggttaat 18090883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 19488018 - 19488048
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  19488018 taacattttgattaaattaaatagggttaat 19488048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 509 - 559
Target Start/End: Complemental strand, 34334290 - 34334240
Alignment:
Q  509 gttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaa 559  Q
    |||||||||||||||| ||| | |||||||||| |||||||||| ||||||    
T  34334290 gttaaggaaactaaaagtagcatgtttgtattggattcaacaatattttaa 34334240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 39087616 - 39087670
Alignment:
Q  299 attaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    |||||||| |||||| ||||||||||| | |||||||||||||| ||| ||||||    
T  39087616 attaaattcaataggtttaattaaacatgggtaatacagtaaaagtaagcataga 39087670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 42782415 - 42782445
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  42782415 taacattttgattaaattaaatagggttaat 42782445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 4290603 - 4290546
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||  |||||||||| ||| ||||||||| |||  |||||||||||||||||    
T  4290603 taacattttatttaaattaaacaggattaattaaatagggttaatacagtaaaattaa 4290546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 319
Target Start/End: Complemental strand, 9542929 - 9542900
Alignment:
Q  290 aacattttgattaaattaaatagggttaat 319  Q
    ||||||||||||||||||||||||||||||    
T  9542929 aacattttgattaaattaaatagggttaat 9542900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 342
Target Start/End: Complemental strand, 38328360 - 38328319
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaa 342  Q
    ||||||||||||| ||||||||||| | ||||||||||||||    
T  38328360 taaattaaataggtttaattaaacatgggtaatacagtaaaa 38328319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 662
Target Start/End: Complemental strand, 44588243 - 44588198
Alignment:
Q  617 taagtttgtcctcttaaccaatgtcctaagggcactctttaacatt 662  Q
    ||||||||||||||||| ||||||| |||| || ||||||||||||    
T  44588243 taagtttgtcctcttaatcaatgtcgtaagagcgctctttaacatt 44588198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 1e-34; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 498 - 657
Target Start/End: Complemental strand, 21268431 - 21268278
Alignment:
Q  498 ttaagacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcacca 597  Q
    |||| ||||||||||| |||||||||||||| || ||||||||||||||||||||||||||| ||||||||| | |||||||| | |     ||||||||    
T  21268431 ttaaaacactagttaaagaaactaaaaatagtaaatttgtattgaattcaacaattttttaa-cttttaaaagttaaatctatcatt-----tttcacca 21268338  T
Q  598 ttttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactcttta 657  Q
    |||  ||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||    
T  21268337 tttctcaatacaacatttctaagtttgtcctcttaaccaatgccctaagggcactcttta 21268278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 502 - 664
Target Start/End: Complemental strand, 27935155 - 27934998
Alignment:
Q  502 gacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccatttt 601  Q
    |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||| |||| |     ||||||||||||    
T  27935155 gacactcgttaaggaaacaaaaaatagtaagtttgtattgaattcaacaatttttgaacttttaaaaaatcaaatccattatt-----tttcaccatttt 27935061  T
Q  602 ccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    ||||||||   |||||||||||||| | |||||||||| ||  ||||||||||||| ||||||    
T  27935060 ccaatacaaaatttttaagtttgtctttttaaccaatgccccgagggcactctttagcatttc 27934998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 479 - 657
Target Start/End: Original strand, 36596530 - 36596703
Alignment:
Q  479 gttaggctaatttgtgtctttaagacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatct 578  Q
    |||| ||||||  ||||| ||||  |||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||| ||| |||| |||||| |    
T  36596530 gttatgctaatcagtgtccttaaagcactagttaaagaaattaaaaatagtaagtttgcattgaattcaacaattttttaacttttaaaaattcaaatat 36596629  T
Q  579 attacttttcatttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactcttta 657  Q
    || | ||||||||      |||  ||||||| | ||| |||||||||| |||||| ||||||||||| |||||||||||    
T  36596630 atcaattttcatt-----gtttctcaatacaacatttctaagtttgtcttcttaatcaatgtcctaaaggcactcttta 36596703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 521 - 663
Target Start/End: Complemental strand, 10832320 - 10832183
Alignment:
Q  521 aaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaatacatcctttttaag 620  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||| ||||||||||||||  | |     |||||||||||||||||| |   ||||||||    
T  10832320 aaaaatagtaagtttgaattgaattcaacaattttttaacttttaaaaaatcaaatctagcaat-----tttcaccattttccaatataaaatttttaag 10832226  T
Q  621 tttgtcctcttaaccaatgtcctaagggcactctttaacattt 663  Q
    ||| || |||| |||||||  |||||||||||||||| |||||    
T  10832225 tttatcttctttaccaatgctctaagggcactctttagcattt 10832183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 20089396 - 20089453
Alignment:
Q  293 attttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcat 350  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  20089396 attttgattaaattaaatagggttaattaaacagggataatacagtaaaattaatcat 20089453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 8256591 - 8256507
Alignment:
Q  264 atttgtttattttgctttc-ataaca--taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||    
T  8256591 atttgtttattttgatttccataacaattaacattttgattaaattaaatagggttaattaaatagg-gtaatatagtaaaattaa 8256507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 504 - 639
Target Start/End: Original strand, 40289069 - 40289199
Alignment:
Q  504 cactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttcc 603  Q
    ||||||||||| |||  |||||| | ||||||| ||||||||||| |||| |||||| ||| |||| |||||||||| |||||||| |     |||| ||    
T  40289069 cactagttaagaaaataaaaaatggtaagtttgcattgaattcaataattatttaacttttcaaaagtcaaatctatcacttttcact-----atttccc 40289163  T
Q  604 aatacatcctttttaagtttgtcctcttaaccaatg 639  Q
    |||||| | ||||||| ||| |||||||||||||||    
T  40289164 aatacaacatttttaaatttatcctcttaaccaatg 40289199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 288 - 350
Target Start/End: Complemental strand, 9754285 - 9754224
Alignment:
Q  288 ataacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcat 350  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||| |||||||||||||||    
T  9754285 ataacattttgattaaat-aaatagggttaattaaataggggtaatatagtaaaattaatcat 9754224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 1827442 - 1827499
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  1827442 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 1827499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 16301280 - 16301337
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  16301280 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 16301337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 16301869 - 16301926
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||||| ||||||||||| |||  |||||||||||||||||    
T  16301869 taacattttgattaaattaaatatggttaattaaatagggttaatacagtaaaattaa 16301926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 28572140 - 28572197
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  28572140 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 28572197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 502 - 589
Target Start/End: Original strand, 12381173 - 12381258
Alignment:
Q  502 gacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttca 589  Q
    ||||||||||||| |||| |||||| | ||||||  ||||||||||||||||||||||| ||| |||| |||||||||| || |||||    
T  12381173 gacactagttaagtaaacaaaaaatggtaagttt--attgaattcaacaattttttaacttttcaaaagtcaaatctatcacatttca 12381258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 502 - 589
Target Start/End: Original strand, 12385240 - 12385325
Alignment:
Q  502 gacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttca 589  Q
    ||||||||||||| |||| |||||| | ||||||  ||||||||||||||||||||||| ||| |||| |||||||||| || |||||    
T  12385240 gacactagttaagtaaacaaaaaatggtaagttt--attgaattcaacaattttttaacttttcaaaagtcaaatctatcacatttca 12385325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 19321354 - 19321297
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| ||||||||||||| |||  |||||||||||||||||    
T  19321354 taacattttgatcaaattaaacagggttaattaaatagggttaatacagtaaaattaa 19321297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 22198300 - 22198243
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||||| |||||||||||    
T  22198300 taacattttgattaaattaaacagggttaattaaatagggttaatatagtaaaattaa 22198243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 28950704 - 28950761
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||||||||||| |||||||||||||| |||  ||||| |||||||||||    
T  28950704 taacattttgattaaattaagtagggttaattaaatagggttaatatagtaaaattaa 28950761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 33075051 - 33074994
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||||| |||||||||||    
T  33075051 taacattttgattaaattaaacagggttaattaaatagggttaatatagtaaaattaa 33074994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 504 - 557
Target Start/End: Original strand, 34429749 - 34429802
Alignment:
Q  504 cactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaatttttt 557  Q
    |||| ||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  34429749 cacttgttaaggaaacaaaaaatagtaagtttgttttgaattcaacaatttttt 34429802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 50562396 - 50562453
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| | ||||||||||| |||  |||||||||||||||||    
T  50562396 taacattttgattaaattaaacaaggttaattaaatagggttaatacagtaaaattaa 50562453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 680 - 727
Target Start/End: Original strand, 15444495 - 15444542
Alignment:
Q  680 tgattaatagtgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  15444495 tgattaatagtgttgattttaatggtaaaatatgtattatttactaaa 15444542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 530 - 589
Target Start/End: Complemental strand, 15445036 - 15444977
Alignment:
Q  530 aagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttca 589  Q
    ||||||| ||||||||||| ||||||||||| ||| ||||||||| | ||||||||||||    
T  15445036 aagtttgcattgaattcaataattttttaacttttaaaaaatcaactttattacttttca 15444977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 587
Target Start/End: Original strand, 23328396 - 23328480
Alignment:
Q  503 acactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattactttt 587  Q
    |||| ||||||| |||||| |||||  || |||| ||||||||||||||||||||||| ||| |||| || | ||||| ||||||    
T  23328396 acaccagttaagaaaactagaaataataaatttgcattgaattcaacaattttttaacttttaaaaagtctagtctatcactttt 23328480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 21056217 - 21056163
Alignment:
Q  264 atttgtttattttgctttc-ataaca--taacattttgattaaattaaatagggt 315  Q
    |||||||||||||| |||| ||||||  |||||||||||||||||||||||||||    
T  21056217 atttgtttattttgatttccataacaattaacattttgattaaattaaatagggt 21056163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 35598350 - 35598308
Alignment:
Q  279 tttcataaca--taacattttgattaaattaaatagggttaat 319  Q
    ||||||||||  |||||||||||||||||||||||||||||||    
T  35598350 tttcataacaattaacattttgattaaattaaatagggttaat 35598308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 1828179 - 1828209
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  1828179 taacattttgattaaattaaatagggttaat 1828209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 4893709 - 4893739
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  4893709 taacattttgattaaattaaatagggttaat 4893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 5428056 - 5428086
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  5428056 taacattttgattaaattaaatagggttaat 5428086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 19320721 - 19320691
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  19320721 taacattttgattaaattaaatagggttaat 19320691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 24289516 - 24289486
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  24289516 taacattttgattaaattaaatagggttaat 24289486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 28572887 - 28572917
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  28572887 taacattttgattaaattaaatagggttaat 28572917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 29184778 - 29184748
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  29184778 taacattttgattaaattaaatagggttaat 29184748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 33363313 - 33363343
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  33363313 taacattttgattaaattaaatagggttaat 33363343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 628 - 666
Target Start/End: Original strand, 34644257 - 34644295
Alignment:
Q  628 tcttaaccaatgtcctaagggcactctttaacatttctc 666  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  34644257 tcttaatcaatgtcctaaggacactctttaacatttctc 34644295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 35599431 - 35599401
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  35599431 taacattttgattaaattaaatagggttaat 35599401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 38896556 - 38896586
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  38896556 taacattttgattaaattaaatagggttaat 38896586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 590 - 664
Target Start/End: Original strand, 43168197 - 43168271
Alignment:
Q  590 tttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    ||||||||||| ||||||||   ||| ||  ||| || |||||||||||| ||||||||||||||||| ||||||    
T  43168197 tttcaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccctaagggcactctttagcatttc 43168271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 47136870 - 47136900
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  47136870 taacattttgattaaattaaatagggttaat 47136900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 47137599 - 47137629
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  47137599 taacattttgattaaattaaatagggttaat 47137629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 49586904 - 49586934
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  49586904 taacattttgattaaattaaatagggttaat 49586934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 52311183 - 52311233
Alignment:
Q  296 ttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||||| ||||||||||||| |||  ||||| |||||||||||    
T  52311183 ttgattaaattaaacagggttaattaaatagggttaatatagtaaaattaa 52311233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 4892432 - 4892489
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||  |||||||||| ||| ||||||||| |||  |||||||||||||||||    
T  4892432 taacattttatttaaattaaacaggattaattaaatagggttaatacagtaaaattaa 4892489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 28571397 - 28571454
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| || |||||||||| | |  ||||||||||| |||||    
T  28571397 taacattttgattaaattaaacagtgttaattaaatatggttaatacagtaagattaa 28571454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 29186055 - 29185998
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||  |||||||||| ||| ||||||||| |||  |||||||||||||||||    
T  29186055 taacattttatttaaattaaacaggattaattaaatagggttaatacagtaaaattaa 29185998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 318
Target Start/End: Complemental strand, 46624407 - 46624378
Alignment:
Q  289 taacattttgattaaattaaatagggttaa 318  Q
    ||||||||||||||||||||||||||||||    
T  46624407 taacattttgattaaattaaatagggttaa 46624378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 4e-31; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 507 - 664
Target Start/End: Complemental strand, 12060190 - 12060038
Alignment:
Q  507 tagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaat 606  Q
    |||| ||||||||||||||||| ||||| | ||||||||||||||||||||||| ||| |||| |||||||||| |||||||||     |||||||||||    
T  12060190 tagtcaaggaaactaaaaatagtaagttggcattgaattcaacaattttttaacttttaaaaactcaaatctatcacttttcat-----cattttccaat 12060096  T
Q  607 acatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    |||   ||| ||| ||||||||||||||||||  || || ||||||||||||||||||    
T  12060095 acaatatttctaaatttgtcctcttaaccaataccccaaaggcactctttaacatttc 12060038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 508 - 671
Target Start/End: Complemental strand, 29213490 - 29213332
Alignment:
Q  508 agttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaata 607  Q
    ||||||| ||| ||||||| | ||||||| |||||||||| |||||||||||| ||| |||| |||||||||| | |     |||||||||||| |||||    
T  29213490 agttaagaaaattaaaaatggtaagtttgcattgaattcagcaattttttaacttttaaaaagtcaaatctatcatt-----tttcaccatttttcaata 29213396  T
Q  608 catcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttctcttaaa 671  Q
     | | ||| ||| |||||||| |||||||||| ||||||| ||||||||||||||| |||||||    
T  29213395 taacgtttctaaatttgtcctattaaccaatgccctaaggacactctttaacatttttcttaaa 29213332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 589
Target Start/End: Original strand, 51877240 - 51877325
Alignment:
Q  504 cactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttca 589  Q
    |||| ||||||||||||||||||||  ||||||||||||||||| ||||||||| || ||| ||||||||||| ||| ||||||||    
T  51877240 cactcgttaaggaaactaaaaatagttagtttgtattgaattcagcaatttttttacttttaaaaaatcaaatatatcacttttca 51877325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 509 - 583
Target Start/End: Complemental strand, 45503434 - 45503360
Alignment:
Q  509 gttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattac 583  Q
    ||||||||||| ||||  ||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||    
T  45503434 gttaaggaaaccaaaataagaaaatttgtattgaattcaacaattttttaacttttaaaaagtcaaatctattac 45503360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 9373160 - 9373245
Alignment:
Q  264 atttgtttattttgctttcataa-ca--taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||||| |||| ||| ||  ||||||||||||||||||||||||||||||||||| |||  ||||| |||||||||||    
T  9373160 atttgtttattttgatttcctaaacaattaacattttgattaaattaaatagggttaattaaatagggttaatatagtaaaattaa 9373245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 36006516 - 36006600
Alignment:
Q  264 atttgtttattttgcttt-cataaca--taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||||| ||| |||||||  ||||||||||||||||||| ||||||||||||||| ||| |||||| |||||||||||    
T  36006516 atttgtttattttgattttcataacaattaacattttgattaaattagatagggttaattaaatagg-gtaatatagtaaaattaa 36006600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 504 - 664
Target Start/End: Original strand, 4298312 - 4298468
Alignment:
Q  504 cactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccatttt-c 602  Q
    ||||||||||| || |||||||||  ||| |||  ||||||| |  ||||||||||  ||| |||| |||||||||| ||||||||     ||||||| |    
T  4298312 cactagttaagaaatctaaaaataataagattgcgttgaatttagtaattttttaatttttaaaaagtcaaatctatcacttttca-----ccatttttc 4298406  T
Q  603 caatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    ||||||| | ||||||| |||||| | ||||||||||  ||||||||||| |||||||||||    
T  4298407 caatacaacatttttaaatttgtcattttaaccaatgctctaagggcactatttaacatttc 4298468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 8527114 - 8527057
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| ||||||||||||| |||| |||||||||||||||||    
T  8527114 taacattttgatcaaattaaacagggttaattaaataggattaatacagtaaaattaa 8527057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 512 - 585
Target Start/End: Complemental strand, 17073191 - 17073118
Alignment:
Q  512 aaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattactt 585  Q
    |||||||| |||||||| ||||||| ||||||||||||| ||||||||  ||| |||| |||||||||||||||    
T  17073191 aaggaaaccaaaaatagtaagtttgcattgaattcaacatttttttaatttttcaaaagtcaaatctattactt 17073118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 35855891 - 35855948
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  35855891 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 35855948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 39093666 - 39093723
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||| ||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  39093666 taacattttaattaaattaaacagggttaattaaataggattaatacagtaaaattaa 39093723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 40822030 - 40821973
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||||||||||||||||| |||  ||||| |||||||||||    
T  40822030 taacattttgattaaattaaatagggttaattaaatagggttaatatagtaaaattaa 40821973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 55293709 - 55293652
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  55293709 taacattttgattaaattaaacagggttaattaaataggcttaatacagtaaaattaa 55293652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 40822413 - 40822361
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  40822413 taaattaaataggtttaattaaacaggagtaatacagtaaaagtaaacataga 40822361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 504 - 592
Target Start/End: Original strand, 50420659 - 50420747
Alignment:
Q  504 cactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcattt 592  Q
    |||||||||| |||| |||||||  ||| |||| ||||||||||||||||||||||| ||| |||| | |||||||| |||||| ||||    
T  50420659 cactagttaaagaaattaaaaatgaaaattttgcattgaattcaacaattttttaacttttaaaaagttaaatctatcactttttattt 50420747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 530 - 589
Target Start/End: Original strand, 43451523 - 43451582
Alignment:
Q  530 aagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttca 589  Q
    ||||||| ||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||    
T  43451523 aagtttgcattgaattcaataattttttaacttttcaaaaatcaaatctatcacttttca 43451582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 590 - 657
Target Start/End: Original strand, 46298806 - 46298873
Alignment:
Q  590 tttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactcttta 657  Q
    |||||||||||| ||||||||| ||| ||| ||||||||||||||||||| | ||| |||||||||||    
T  46298806 tttcaccatttttcaatacatcgtttctaaatttgtcctcttaaccaatgccttaaaggcactcttta 46298873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 19368380 - 19368323
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||||| ||||||||||| |||  |||||||||||||||||    
T  19368380 taacattttgataaaattaaatatggttaattaaatagggttaatacagtaaaattaa 19368323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 29529799 - 29529742
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| ||||||||||||| |||  |||||||||||||||||    
T  29529799 taacattttgatcaaattaaacagggttaattaaatagggttaatacagtaaaattaa 29529742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 53801583 - 53801640
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| | ||||||||||| |||  |||||||||||||||||    
T  53801583 taacattttgattaaattaaacaaggttaattaaatagggttaatacagtaaaattaa 53801640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 40822253 - 40822201
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    ||||||||||||| ||||||||||| |||||||||||||||| ||| ||||||    
T  40822253 taaattaaataggtttaattaaacaagagtaatacagtaaaagtaagcataga 40822201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 664
Target Start/End: Original strand, 50673056 - 50673210
Alignment:
Q  504 cactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttcc 603  Q
    ||||||||||  |||| ||||||   ||| ||| |||||||||  |||||||| ||| ||| |||| |||||||||| |||||||| |     |||| ||    
T  50673056 cactagttaacaaaacaaaaaatgataagattgcattgaattctgcaattttt-aacttttaaaaagtcaaatctatcacttttcact-----atttccc 50673149  T
Q  604 aatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    |||||| | ||||||| |||  | |||||||||||| ||||||||||||||||| ||||||    
T  50673150 aatacaacatttttaaatttaccttcttaaccaatgccctaagggcactctttagcatttc 50673210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 53522285 - 53522340
Alignment:
Q  293 attttgattaaattaaatagggttaattaa--acaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||||||||||||  | ||| ||||||||||||||||||    
T  53522285 attttgattaaattaaatagggttaattaaatataggggtaatacagtaaaattaa 53522340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 9373990 - 9374048
Alignment:
Q  264 atttgtttattttgctttc-ataaca--taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||| |||| ||||||  |||||||||||||||||||||||||||||||    
T  9373990 atttgtttattttgatttccataacaattaacattttgattaaattaaatagggttaat 9374048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 51656518 - 51656460
Alignment:
Q  264 atttgtttattttgctttc-ataaca--taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||| |||| ||||||  |||||||||||||||||||||||||||||||    
T  51656518 atttgtttattttgatttccataacaattaacattttgattaaattaaatagggttaat 51656460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 589
Target Start/End: Complemental strand, 20256220 - 20256137
Alignment:
Q  504 cactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttca 589  Q
    |||||||||||||||| |||||| ||  | ||| || ||||||| |||||||||||| ||| ||| ||||||||||| ||||||||    
T  20256220 cactagttaaggaaaccaaaaatgga--gcttggatcgaattcatcaattttttaacttttaaaagatcaaatctatcacttttca 20256137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 36946579 - 36946633
Alignment:
Q  299 attaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||| ||| ||||||    
T  36946579 attaaattaaataggtttaattaaacaggggtaatagagtaaaagtaagcataga 36946633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 664
Target Start/End: Original strand, 41998975 - 41999012
Alignment:
Q  627 ctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    |||||||||||||||| |||||||||||||||||||||    
T  41998975 ctcttaaccaatgtcccaagggcactctttaacatttc 41999012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 516 - 576
Target Start/End: Complemental strand, 271288 - 271228
Alignment:
Q  516 aaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaat 576  Q
    |||| |||| |||||||||||||||| |||||||||| ||||||| ||| |||| ||||||    
T  271288 aaaccaaaagtagaaagtttgtattggattcaacaatgttttaacttttaaaaagtcaaat 271228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 680 - 724
Target Start/End: Complemental strand, 27151597 - 27151553
Alignment:
Q  680 tgattaatagtgttgattttaatgataaaatgtgttttatttact 724  Q
    ||||||||||||||| ||||||||||||||||||| | |||||||    
T  27151597 tgattaatagtgttggttttaatgataaaatgtgtatcatttact 27151553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 36946736 - 36946788
Alignment:
Q  299 attaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||| ||| ||||    
T  36946736 attaaattaaataggtttaattaaacaggggtaatatagtaaaaataagcata 36946788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 53521986 - 53522041
Alignment:
Q  293 attttgattaaattaaatagggttaattaa--acaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||  | ||| ||||||||||||||||||    
T  53521986 attttgattaaattaaataggattaattaaatataggggtaatacagtaaaattaa 53522041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 625 - 664
Target Start/End: Complemental strand, 18805 - 18766
Alignment:
Q  625 tcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  18805 tcctcttaaccaatgccctaagggcactctttagcatttc 18766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 40822715 - 40822664
Alignment:
Q  302 aaattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    |||||||||||| ||||||||||||| |||||||| ||||| ||| ||||||    
T  40822715 aaattaaataggtttaattaaacaggggtaatacaataaaagtaagcataga 40822664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 53521766 - 53521824
Alignment:
Q  264 atttgtttattttgctttc-ataaca--taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||| | |||| ||||||  |||||||||||||||||||||||||||||||    
T  53521766 atttgtttatttcgatttccataacaattaacattttgattaaattaaatagggttaat 53521824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 9374145 - 9374175
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  9374145 taacattttgattaaattaaatagggttaat 9374175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 19361660 - 19361630
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  19361660 taacattttgattaaattaaatagggttaat 19361630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 19893479 - 19893449
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  19893479 taacattttgattaaattaaatagggttaat 19893449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 26101079 - 26101049
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  26101079 taacattttgattaaattaaatagggttaat 26101049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 26101704 - 26101674
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  26101704 taacattttgattaaattaaatagggttaat 26101674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 26776736 - 26776706
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  26776736 taacattttgattaaattaaatagggttaat 26776706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 625 - 675
Target Start/End: Complemental strand, 27864020 - 27863970
Alignment:
Q  625 tcctcttaaccaatgtcctaagggcactctttaacatttctcttaaagaaa 675  Q
    ||||||||||||||| | ||||||||||||||| |||||| || |||||||    
T  27864020 tcctcttaaccaatgccttaagggcactctttagcatttccctaaaagaaa 27863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 29529052 - 29529022
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  29529052 taacattttgattaaattaaatagggttaat 29529022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 35860744 - 35860774
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  35860744 taacattttgattaaattaaatagggttaat 35860774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 39094292 - 39094322
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  39094292 taacattttgattaaattaaatagggttaat 39094322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 46489355 - 46489385
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  46489355 taacattttgattaaattaaatagggttaat 46489385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 48519956 - 48519926
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  48519956 taacattttgattaaattaaatagggttaat 48519926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 49067908 - 49067958
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    |||||| |||||| ||||||||||||| |||||||||||||| ||| ||||    
T  49067908 taaattcaataggtttaattaaacaggggtaatacagtaaaagtaagcata 49067958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 53802104 - 53802134
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  53802104 taacattttgattaaattaaatagggttaat 53802134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 53927522 - 53927572
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    ||||||||||||| ||||||||||||| |||||||| ||||| ||| ||||    
T  53927522 taaattaaataggtttaattaaacaggggtaatacaataaaagtaagcata 53927572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 55290695 - 55290665
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  55290695 taacattttgattaaattaaatagggttaat 55290665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 22521994 - 22522051
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||||| || | ||| || |||  |||||||||||||||||    
T  22521994 taacattttgattaaattaaatatggatgatttaatagggttaatacagtaaaattaa 22522051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 504 - 663
Target Start/End: Complemental strand, 39972286 - 39972132
Alignment:
Q  504 cactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttcc 603  Q
    |||||||||||||||| |||||||| | ||||| |||||||| |||||||||||||| ||| |||| ||||||  || |||     ||||||||||| ||    
T  39972286 cactagttaaggaaaccaaaaatagtatgtttgcattgaattgaacaattttttaacttttaaaaagtcaaattcatcact-----tttcaccatttccc 39972192  T
Q  604 aatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacattt 663  Q
    |||||| | ||| ||| |||||| |||||||||||| ||||||||||||||||| |||||    
T  39972191 aatacaacatttctaaatttgtcttcttaaccaatgccctaagggcactctttagcattt 39972132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 506 - 664
Target Start/End: Original strand, 5074808 - 5074961
Alignment:
Q  506 ctagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaa 605  Q
    |||||||| |||||||||||||| ||||||| | ||||||||||||||||||||| ||  |||| |||| ||||| | ||||||      ||||||||||    
T  5074808 ctagttaaagaaactaaaaatagtaagtttgcactgaattcaacaattttttaactttaaaaaagtcaattctataatttttcaa-----cattttccaa 5074902  T
Q  606 tacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    |||| | ||| |||||||||| |||||||||||| ||||| ||||||||||| ||||||    
T  5074903 tacaacatttctaagtttgtcatcttaaccaatgccctaaaggcactctttagcatttc 5074961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 1944183 - 1944240
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  1944183 taacattttgattaaattaaatagggttaattaaatagggttaatacagtaaaattaa 1944240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 18493154 - 18493211
Alignment:
Q  293 attttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcat 350  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||    
T  18493154 attttgattagattaaatagggttaattaaacaggggtaatatagtaaaattaatcat 18493211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 7390311 - 7390368
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  7390311 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 7390368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 8161446 - 8161389
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  8161446 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 8161389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 8762007 - 8762064
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  8762007 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 8762064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 25835045 - 25834988
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  25835045 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 25834988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 41978586 - 41978643
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  41978586 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 41978643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 498 - 589
Target Start/End: Original strand, 43285171 - 43285265
Alignment:
Q  498 ttaagacactagttaaggaaactaaaaatagaaagtttgtat---tgaattcaacaattttttaaccttttaaaaatcaaatctattacttttca 589  Q
    |||||||| ||||||||||||| |||||| | |||||   ||   ||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  43285171 ttaagacattagttaaggaaacaaaaaatggtaagttaacattgatgaattcaacaattttttaacttttcaaaaatcaaatctatcacttttca 43285265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 507 - 589
Target Start/End: Original strand, 13520595 - 13520678
Alignment:
Q  507 tagttaaggaaactaaaaa-tagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttca 589  Q
    ||||||||||||| ||||| | | |||||||||||||||| | |||||||||||| ||| ||||  ||||||||||||||||||    
T  13520595 tagttaaggaaacaaaaaaatggtaagtttgtattgaatttagcaattttttaacttttcaaaagccaaatctattacttttca 13520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 507 - 589
Target Start/End: Original strand, 13610130 - 13610213
Alignment:
Q  507 tagttaaggaaactaaaaa-tagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttca 589  Q
    ||||||||||||| ||||| | | |||||||||||||||| | |||||||||||| ||| ||||  ||||||||||||||||||    
T  13610130 tagttaaggaaacaaaaaaatggtaagtttgtattgaatttagcaattttttaacttttcaaaagccaaatctattacttttca 13610213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 4465399 - 4465342
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| | ||||||||||| |||  |||||||||||||||||    
T  4465399 taacattttgattaaattaaacatggttaattaaatagggttaatacagtaaaattaa 4465342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 12761231 - 12761288
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||| ||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  12761231 taacattttaattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 12761288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 32845570 - 32845627
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  || ||||||||||||||    
T  32845570 taacattttgattaaattaaacagggttaattaaatagggttactacagtaaaattaa 32845627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 41157652 - 41157705
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaa 342  Q
    ||||||||||||||||||||||||||||||||||| ||   |||||||||||||    
T  41157652 taacattttgattaaattaaatagggttaattaaatagagttaatacagtaaaa 41157705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 41532761 - 41532704
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| | ||||||||||| |||  |||||||||||||||||    
T  41532761 taacattttgattaaattaaacatggttaattaaatagggttaatacagtaaaattaa 41532704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 44381714 - 44381657
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||| ||||||||| |||  |||||||||||||||||    
T  44381714 taacattttgattaaattaaacaggtttaattaaatagggttaatacagtaaaattaa 44381657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 41843974 - 41844028
Alignment:
Q  299 attaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    ||||||||||||||| ||||||||||||  |||||||||||||| ||| ||||||    
T  41843974 attaaattaaataggtttaattaaacagaggtaatacagtaaaagtaaacataga 41844028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 41844173 - 41844227
Alignment:
Q  299 attaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    ||||||||||||||| ||||||||||| | |||||||||||||| ||| ||||||    
T  41844173 attaaattaaataggtttaattaaacatgggtaatacagtaaaagtaagcataga 41844227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 36777582 - 36777639
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| | ||||||||||| |||  |||||||||||||||||    
T  36777582 taacattttgatcaaattaaacatggttaattaaatagggttaatacagtaaaattaa 36777639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 566
Target Start/End: Original strand, 20164067 - 20164131
Alignment:
Q  502 gacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaacctttta 566  Q
    |||||||||||||||||  ||||| |  || |||| ||||||||||||||||||||||| |||||    
T  20164067 gacactagttaaggaaataaaaaacaataaatttgaattgaattcaacaattttttaacttttta 20164131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 571
Target Start/End: Original strand, 5300198 - 5300265
Alignment:
Q  504 cactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaat 571  Q
    |||| ||||||||||| |||| ||| ||||||| ||||||||||||||| |||| || ||| ||||||    
T  5300198 cacttgttaaggaaaccaaaagtagtaagtttgcattgaattcaacaatattttgacttttaaaaaat 5300265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 22575816 - 22575765
Alignment:
Q  504 cactagttaaggaaactaaaaatag-aaagtttgtattgaattcaacaattt 554  Q
    |||| ||||||||||||| |||||| |||||||| |||||||||||||||||    
T  22575816 cacttgttaaggaaactagaaatagtaaagtttgcattgaattcaacaattt 22575765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 663
Target Start/End: Complemental strand, 39491851 - 39491792
Alignment:
Q  604 aatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacattt 663  Q
    |||||| | ||||||| |||||  ||||||||||||| ||||||| ||||||||||||||    
T  39491851 aatacaacatttttaaatttgttttcttaaccaatgttctaagggtactctttaacattt 39491792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 1944929 - 1944959
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  1944929 taacattttgattaaattaaatagggttaat 1944959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 4464655 - 4464625
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  4464655 taacattttgattaaattaaatagggttaat 4464625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 7391059 - 7391089
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  7391059 taacattttgattaaattaaatagggttaat 7391089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 8160718 - 8160688
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  8160718 taacattttgattaaattaaatagggttaat 8160688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 8762754 - 8762784
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  8762754 taacattttgattaaattaaatagggttaat 8762784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 9473864 - 9473894
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  9473864 taacattttgattaaattaaatagggttaat 9473894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 16913968 - 16914018
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    ||||||||||| | ||||||||||||| |||||||||||||| ||| ||||    
T  16913968 taaattaaatatgtttaattaaacaggggtaatacagtaaaagtaagcata 16914018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 18375858 - 18375828
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  18375858 taacattttgattaaattaaatagggttaat 18375828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 25361256 - 25361286
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  25361256 taacattttgattaaattaaatagggttaat 25361286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 25618800 - 25618770
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  25618800 taacattttgattaaattaaatagggttaat 25618770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 25834298 - 25834268
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  25834298 taacattttgattaaattaaatagggttaat 25834268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 32846937 - 32846967
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  32846937 taacattttgattaaattaaatagggttaat 32846967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 34894787 - 34894872
Alignment:
Q  264 atttgtttattttgctttc-ataaca--taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||| |||||| |||| ||||||  ||||||||||||||||||||||| | ||||||||| |||  ||||| |||||| ||||    
T  34894787 atttgttcattttgatttccataacaattaacattttgattaaattaaatatgattaattaaatagggttaatatagtaaatttaa 34894872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 36778221 - 36778251
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  36778221 taacattttgattaaattaaatagggttaat 36778251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 37588421 - 37588391
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  37588421 taacattttgattaaattaaatagggttaat 37588391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 38295360 - 38295390
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  38295360 taacattttgattaaattaaatagggttaat 38295390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 40586742 - 40586712
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  40586742 taacattttgattaaattaaatagggttaat 40586712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 44381013 - 44380983
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  44381013 taacattttgattaaattaaatagggttaat 44380983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 1943440 - 1943497
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| || |||||||||| | |  ||||||||||| |||||    
T  1943440 taacattttgattaaattaaacagtgttaattaaatatggttaatacagtaagattaa 1943497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 690 - 727
Target Start/End: Original strand, 7672363 - 7672400
Alignment:
Q  690 tgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    |||||||||||||  |||||||||||||||||||||||    
T  7672363 tgttgattttaatagtaaaatgtgttttatttactaaa 7672400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 8162189 - 8162132
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| || |||||||||| | |  ||||||||||| |||||    
T  8162189 taacattttgattaaattaaacagtgttaattaaatatggttaatacagtaagattaa 8162132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 8761375 - 8761432
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| || |||||||||| | |  ||||||||||| |||||    
T  8761375 taacattttgattaaattaaacagtgttaattaaatatggttaatacagtaagattaa 8761432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 9473226 - 9473283
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| | ||||||||||| |||  ||||||| |||||||||    
T  9473226 taacattttgatcaaattaaacatggttaattaaatagggttaatacaataaaattaa 9473283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 682 - 727
Target Start/End: Complemental strand, 11649710 - 11649665
Alignment:
Q  682 attaatagtgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    |||||||| |||||||||||| ||||||||||| | ||||||||||    
T  11649710 attaatagggttgattttaataataaaatgtgtatcatttactaaa 11649665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 25835677 - 25835620
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| || |||||||||| | |  ||||||||||| |||||    
T  25835677 taacattttgattaaattaaacagtgttaattaaatatggttaatacagtaagattaa 25835620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 32846203 - 32846260
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| || |||||||||| | |  ||||||||||| |||||    
T  32846203 taacattttgattaaattaaacagtgttaattaaatatggttaatacagtaagattaa 32846260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 496 - 589
Target Start/End: Complemental strand, 35237112 - 35237019
Alignment:
Q  496 ctttaagacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttca 589  Q
    ||||| ||||||||||||| |||| ||||||   ||||||| |||||||| | | ||||| |||| |||||||||  |||| ||| ||||||||    
T  35237112 ctttatgacactagttaagaaaacaaaaaatgataagtttgcattgaatttagcgattttataactttttaaaaagtaaatttatcacttttca 35237019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 682 - 723
Target Start/End: Original strand, 35894937 - 35894978
Alignment:
Q  682 attaatagtgttgattttaatgataaaatgtgttttatttac 723  Q
    ||||||| |||||||||||||| |||||||||||| ||||||    
T  35894937 attaataatgttgattttaatgttaaaatgtgtttcatttac 35894978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 44428537 - 44428484
Alignment:
Q  293 attttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||| ||||||||||| | |  ||||| |||||||||||    
T  44428537 attttgattaaattaaatatggttaattaaatatggttaatatagtaaaattaa 44428484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 6e-27; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 505 - 663
Target Start/End: Complemental strand, 39418251 - 39418098
Alignment:
Q  505 actagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttcca 604  Q
    ||||| ||||||||| |||||| | ||||||||||| ||||||||||||||||||| ||| |||| |||||  ||| |||||| |     ||||| ||||    
T  39418251 actagataaggaaacaaaaaatggtaagtttgtattaaattcaacaattttttaacttttaaaaagtcaaacatatcacttttta-----ccattatcca 39418157  T
Q  605 atacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacattt 663  Q
    ||||| | ||| ||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  39418156 atacaacatttctaaatttgtactcttaaccaatgtcctaaggacactctttaacattt 39418098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 516 - 663
Target Start/End: Original strand, 49483084 - 49483226
Alignment:
Q  516 aaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaatacatccttt 615  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||||| ||  |||| |||||||||| |||     |||||||||||||||||| |   |||    
T  49483084 aaaccaaaaatagtaagtttgaattgaattcaataattttttaactttgaaaaagtcaaatctatcact-----tttcaccattttccaataaaattttt 49483178  T
Q  616 ttaagtttgtcctcttaaccaatgtcctaagggcactctttaacattt 663  Q
     ||| ||| || ||||||||||| |||||| |||||||||||||||||    
T  49483179 ataaatttatcttcttaaccaatatcctaaaggcactctttaacattt 49483226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 288 - 350
Target Start/End: Complemental strand, 48808472 - 48808410
Alignment:
Q  288 ataacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcat 350  Q
    |||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||||||||    
T  48808472 ataacattttgattaaattaaatagggttaattaaatagggctaatacagtataattaatcat 48808410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 590 - 663
Target Start/End: Complemental strand, 11996156 - 11996084
Alignment:
Q  590 tttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacattt 663  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  11996156 tttcaccattttccaatacaacatttctaagtttgtcctcttaacc-atgccctaagggcactctttagcattt 11996084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 39404906 - 39404849
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  39404906 taacattttgattaaattaaatagggttaattaaatagaggtaatacagtaaaattaa 39404849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 8988195 - 8988252
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  8988195 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 8988252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 20590060 - 20590117
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  20590060 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 20590117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 24548411 - 24548468
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| ||||||||||||| |||| |||||||||||||||||    
T  24548411 taacattttgatcaaattaaacagggttaattaaataggattaatacagtaaaattaa 24548468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 24944968 - 24944911
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  24944968 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 24944911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 24947684 - 24947627
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  24947684 taacattttgattaaattaaagagggttaattaaatagggttaatacagtaaaattaa 24947627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 37351095 - 37351152
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  37351095 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 37351152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 590 - 663
Target Start/End: Original strand, 44478757 - 44478830
Alignment:
Q  590 tttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacattt 663  Q
    |||||| ||||||||||||| | |||||||||||||||||||||| |||||   |||| |||||||||||||||    
T  44478757 tttcacaattttccaatacaacatttttaagtttgtcctcttaacaaatgttgaaaggacactctttaacattt 44478830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 46105263 - 46105320
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  46105263 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 46105320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 26603434 - 26603519
Alignment:
Q  264 atttgtttattttgctttc-ataaca--taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| | |||| ||||||  ||||||||||||||||||| ||||||||||||||| |||  ||||| |||||||||||    
T  26603434 atttgtttatttcgatttccataacaattaacattttgattaaattagatagggttaattaaatagggttaatatagtaaaattaa 26603519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 2117188 - 2117245
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| | ||||||||||| |||  |||||||||||||||||    
T  2117188 taacattttgattaaattaaacatggttaattaaatagggttaatacagtaaaattaa 2117245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 8531954 - 8532011
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||||||||||||||| |||||||||| |||  ||||||| |||||||||    
T  8531954 taacattttgattaaattaaatagtgttaattaaatagggttaatacaataaaattaa 8532011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 24944448 - 24944391
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||||||||||||||||| |||  || ||| ||||||||||    
T  24944448 taacattttgattaaattaaatagggttaattaaatagggttagtactgtaaaattaa 24944391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 541 - 664
Target Start/End: Complemental strand, 2940336 - 2940218
Alignment:
Q  541 gaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgt 640  Q
    |||||||||||||||||||| ||| |||| ||||||| |  | ||||||     |||||| ||||| || | ||| ||| |||||||||||||| ||||     
T  2940336 gaattcaacaattttttaacttttaaaaagtcaaatcaaccatttttca-----ccatttcccaatgcaacatttctaaatttgtcctcttaactaatgc 2940242  T
Q  641 cctaagggcactctttaacatttc 664  Q
    |||||||||||| |||| ||||||    
T  2940241 cctaagggcactatttagcatttc 2940218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 620 - 666
Target Start/End: Original strand, 30618035 - 30618081
Alignment:
Q  620 gtttgtcctcttaaccaatgtcctaagggcactctttaacatttctc 666  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  30618035 gtttatcctcttaaccaatgccctaagggcactctttagcatttctc 30618081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 3758376 - 3758433
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| | ||||||||||| |||  |||||||||||||||||    
T  3758376 taacattttgatcaaattaaacatggttaattaaatagggttaatacagtaaaattaa 3758433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 52801356 - 52801413
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||  |||||||||| ||| ||||||||| |||| |||||||||||||||||    
T  52801356 taacattttatttaaattaaacaggattaattaaataggattaatacagtaaaattaa 52801413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 8120334 - 8120279
Alignment:
Q  293 attttgattaaattaaatagggttaattaa--acaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||| ||||||||||||  | ||| ||||||||||||||||||    
T  8120334 attttgattaaattaaacagggttaattaaatataggggtaatacagtaaaattaa 8120279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 657
Target Start/End: Complemental strand, 10567396 - 10567265
Alignment:
Q  521 aaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaatacatcctttttaag 620  Q
    |||||||  |||||||||||||||| |||||||||||||  ||| |||| ||||||| || |||     || |||||||| | |||||| | |||||||     
T  10567396 aaaaataataagtttgtattgaatttaacaattttttaatttttaaaaagtcaaatccatcact-----ttccaccatttcctaatacaacatttttaaa 10567302  T
Q  621 tttgtcctcttaaccaatgtcctaagggcactcttta 657  Q
    || ||| ||||||||||| || |||| | ||||||||    
T  10567301 ttagtcttcttaaccaatatcttaagagtactcttta 10567265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 621 - 665
Target Start/End: Complemental strand, 32885010 - 32884966
Alignment:
Q  621 tttgtcctcttaaccaatgtcctaagggcactctttaacatttct 665  Q
    |||||| |||||| ||||||||||||| |||||||||||||||||    
T  32885010 tttgtcttcttaatcaatgtcctaaggacactctttaacatttct 32884966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 351
Target Start/End: Complemental strand, 54242895 - 54242843
Alignment:
Q  299 attaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    ||||||||||||||| ||||||||||| | |||||||||||||| ||| ||||    
T  54242895 attaaattaaataggtttaattaaacatgggtaatacagtaaaagtaagcata 54242843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 680 - 727
Target Start/End: Original strand, 11024907 - 11024954
Alignment:
Q  680 tgattaatagtgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    |||||||||||||||||||||||| || ||| ||||| ||||||||||    
T  11024907 tgattaatagtgttgattttaatggtataatatgtttcatttactaaa 11024954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 552
Target Start/End: Original strand, 15986246 - 15986289
Alignment:
Q  509 gttaaggaaactaaaaatagaaagtttgtattgaattcaacaat 552  Q
    |||||||||||||||| ||||| ||||| |||||||||||||||    
T  15986246 gttaaggaaactaaaagtagaatgtttgcattgaattcaacaat 15986289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 680 - 727
Target Start/End: Original strand, 23915447 - 23915494
Alignment:
Q  680 tgattaatagtgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    |||||| ||||||||||||||||| |||||| ||||| ||||||||||    
T  23915447 tgattagtagtgttgattttaatggtaaaatatgtttaatttactaaa 23915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 26602679 - 26602737
Alignment:
Q  264 atttgtttattttgctttc-ataaca--taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||| |||| ||||||  || ||||||||||||||||||||||||||||    
T  26602679 atttgtttattttgatttccataacaattaccattttgattaaattaaatagggttaat 26602737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 2117931 - 2117961
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  2117931 taacattttgattaaattaaatagggttaat 2117961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 3759021 - 3759051
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  3759021 taacattttgattaaattaaatagggttaat 3759051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 8964575 - 8964605
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  8964575 taacattttgattaaattaaatagggttaat 8964605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 8988942 - 8988972
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  8988942 taacattttgattaaattaaatagggttaat 8988972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 9887585 - 9887555
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  9887585 taacattttgattaaattaaatagggttaat 9887555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 12680935 - 12680905
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  12680935 taacattttgattaaattaaatagggttaat 12680905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 13172690 - 13172720
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  13172690 taacattttgattaaattaaatagggttaat 13172720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 17741404 - 17741434
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  17741404 taacattttgattaaattaaatagggttaat 17741434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 590 - 664
Target Start/End: Original strand, 22376310 - 22376384
Alignment:
Q  590 tttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    ||||||||||| |||||||||  ||| ||  ||  | ||||||||||||| ||||||||||||||||| ||||||    
T  22376310 tttcaccatttcccaatacattttttctattttaattctcttaaccaatgccctaagggcactctttagcatttc 22376384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 24549164 - 24549194
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  24549164 taacattttgattaaattaaatagggttaat 24549194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 36742100 - 36742070
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  36742100 taacattttgattaaattaaatagggttaat 36742070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 37351842 - 37351872
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  37351842 taacattttgattaaattaaatagggttaat 37351872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 37356741 - 37356771
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  37356741 taacattttgattaaattaaatagggttaat 37356771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 39405635 - 39405605
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  39405635 taacattttgattaaattaaatagggttaat 39405605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 39713796 - 39713766
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  39713796 taacattttgattaaattaaatagggttaat 39713766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 46106163 - 46106193
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  46106163 taacattttgattaaattaaatagggttaat 46106193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 50043078 - 50043108
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  50043078 taacattttgattaaattaaatagggttaat 50043108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 52802675 - 52802705
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  52802675 taacattttgattaaattaaatagggttaat 52802705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 8987563 - 8987620
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| || |||||||||| | |  ||||||||||| |||||    
T  8987563 taacattttgattaaattaaacagtgttaattaaatatggttaatacagtaagattaa 8987620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 16904715 - 16904768
Alignment:
Q  293 attttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||| | ||||||||||| |||  ||||||| |||||||||    
T  16904715 attttgattaaattaaacaaggttaattaaatagggttaatacattaaaattaa 16904768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 24389996 - 24390053
Alignment:
Q  293 attttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcat 350  Q
    ||||||||||||||||| |  |||||||||| | | |||||| |||||||||||||||    
T  24389996 attttgattaaattaaaaaatgttaattaaataagggtaatagagtaaaattaatcat 24390053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 37350463 - 37350520
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| || |||||||||| | |  ||||||||||| |||||    
T  37350463 taacattttgattaaattaaacagtgttaattaaatatggttaatacagtaagattaa 37350520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 39714475 - 39714418
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||  |||||||||| ||| ||||||||| |||  |||||||||||||||||    
T  39714475 taacattttatttaaattaaacaggattaattaaatagggttaatacagtaaaattaa 39714418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 42348299 - 42348242
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||||| | ||||||||| |||  ||||| |||||| ||||    
T  42348299 taacattttgattaaattaaatatgattaattaaatagggttaatatagtaaatttaa 42348242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 42348579 - 42348522
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||||| | ||||||||| |||  ||||| |||||| ||||    
T  42348579 taacattttgattaaattaaatatgattaattaaatagggttaatagagtaaatttaa 42348522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 668
Target Start/End: Original strand, 45684050 - 45684091
Alignment:
Q  627 ctcttaaccaatgtcctaagggcactctttaacatttctctt 668  Q
    ||||||||||||| || |||||| ||||||||||||||||||    
T  45684050 ctcttaaccaatgccccaagggctctctttaacatttctctt 45684091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 46419676 - 46419620
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||||| |||||||| || |||| ||||| |||||| ||||    
T  46419676 taacattttgattaaattaaata-ggttaattgaataggattaatatagtaaatttaa 46419620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 47556353 - 47556300
Alignment:
Q  293 attttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||| | ||||| ||||| |||  |||||||||||||||||    
T  47556353 attttgattaaattaaacatggttatttaaatagggttaatacagtaaaattaa 47556300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 682 - 727
Target Start/End: Complemental strand, 50443089 - 50443044
Alignment:
Q  682 attaatagtgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    |||||||||||||||||||||| |||||| ||| | ||||||||||    
T  50443089 attaatagtgttgattttaatggtaaaatctgtatgatttactaaa 50443044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 590 - 664
Target Start/End: Complemental strand, 37848378 - 37848304
Alignment:
Q  590 tttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37848378 tttcaccattttccaatacaatatttttaagtttgtcctcttaaccaatgccctaagggcactctttaacatttc 37848304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 520 - 639
Target Start/End: Complemental strand, 27236927 - 27236813
Alignment:
Q  520 taaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaatacatcctttttaa 619  Q
    ||||||||| || |||||||||||||||||||||||||||| ||| | || |||||||||| | |||||||     ||||||||| ||||   ||| |||    
T  27236927 taaaaatagtaaatttgtattgaattcaacaattttttaacttttaagaagtcaaatctatcatttttcat-----cattttccattacaatatttataa 27236833  T
Q  620 gtttgtcctcttaaccaatg 639  Q
    ||||||||||||||||||||    
T  27236832 gtttgtcctcttaaccaatg 27236813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 507 - 589
Target Start/End: Original strand, 5543024 - 5543106
Alignment:
Q  507 tagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttca 589  Q
    |||||||| ||||||||||||| |||||||  |||||||||||||||||||||| ||| |||| |||||| ||| ||||||||    
T  5543024 tagttaagaaaactaaaaatagcaagtttgcgttgaattcaacaattttttaacttttaaaaagtcaaatatatcacttttca 5543106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 24683325 - 24683268
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  24683325 taacattttgattaaattaaatagggttaattaaatagggttaatacagtaaaattaa 24683268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 355
Target Start/End: Complemental strand, 15236567 - 15236513
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcatagatt 355  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||| ||||||||    
T  15236567 taaattaaataggtttaattaaacaggggtaatacagtaaaagtaagcatagatt 15236513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 682 - 727
Target Start/End: Original strand, 4088192 - 4088237
Alignment:
Q  682 attaatagtgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||    
T  4088192 attaatagtgttgattttaatgataaaatgtgtgttatttgctaaa 4088237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 9150638 - 9150695
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||||| |||||||||||    
T  9150638 taacattttgattaaattaaacagggttaattaaatagggttaatatagtaaaattaa 9150695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 29468440 - 29468497
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||||| |||||||||||    
T  29468440 taacattttgattaaattaaacagggttaattaaatagggttaatatagtaaaattaa 29468497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 35156427 - 35156370
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| ||||||||||||| |||  |||||||||||||||||    
T  35156427 taacattttgatcaaattaaacagggttaattaaatagggttaatacagtaaaattaa 35156370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 44805571 - 44805628
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| ||||||||||||| |||  |||||||||||||||||    
T  44805571 taacattttgatcaaattaaacagggttaattaaatagggttaatacagtaaaattaa 44805628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 49145079 - 49145022
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| | ||||||||||| |||  |||||||||||||||||    
T  49145079 taacattttgattaaattaaacatggttaattaaatagggttaatacagtaaaattaa 49145022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 625 - 664
Target Start/End: Original strand, 9887238 - 9887277
Alignment:
Q  625 tcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  9887238 tcctcttaaccaatgtcctaagggtactctttaacatttc 9887277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 680 - 727
Target Start/End: Complemental strand, 15464789 - 15464742
Alignment:
Q  680 tgattaatagtgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||||    
T  15464789 tgattaatagtgttgattttaatggtaaaatgtgtatcatttactaaa 15464742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 680 - 727
Target Start/End: Complemental strand, 48856078 - 48856031
Alignment:
Q  680 tgattaatagtgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  48856078 tgattaatattgtttattttaatgataaaatgtattttatttactaaa 48856031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 530 - 664
Target Start/End: Original strand, 41084799 - 41084928
Alignment:
Q  530 aagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaatacatcctttttaagtttgtcctc 629  Q
    ||||||||||||| ||||| ||||||||||| ||| |||| | |||||||| | ||||||||     ||||  |||||||   ||||||| ||||||||     
T  41084799 aagtttgtattgagttcaataattttttaacttttaaaaagttaaatctatcaattttcatt-----atttctcaatacaatttttttaaatttgtcctt 41084893  T
Q  630 ttaaccaatgtcctaagggcactctttaacatttc 664  Q
    |||| ||||| |||||  ||||||||| |||||||    
T  41084894 ttaatcaatgccctaaaagcactctttgacatttc 41084928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 7856019 - 7855962
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| |  |||||||||| |||| |||||||||||||||||    
T  7856019 taacattttgatcaaattaaacaatgttaattaaataggattaatacagtaaaattaa 7855962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 33637698 - 33637645
Alignment:
Q  293 attttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||| || |||||||||| |||  |||||||||||||||||    
T  33637698 attttgattaaattaaacagagttaattaaatagggttaatacagtaaaattaa 33637645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 566
Target Start/End: Original strand, 44376904 - 44376968
Alignment:
Q  502 gacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaacctttta 566  Q
    |||||||||||||||||  ||||| |  || |||| ||||||||||||||||||||||| |||||    
T  44376904 gacactagttaaggaaataaaaaacaataaatttgaattgaattcaacaattttttaacttttta 44376968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 566
Target Start/End: Original strand, 44385771 - 44385835
Alignment:
Q  502 gacactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaacctttta 566  Q
    |||||||||||||||||  ||||| |  || |||| ||||||||||||||||||||||| |||||    
T  44385771 gacactagttaaggaaataaaaaacaataaatttgaattgaattcaacaattttttaacttttta 44385835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 680 - 727
Target Start/End: Complemental strand, 762268 - 762221
Alignment:
Q  680 tgattaatagtgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    |||||| ||||||| |||||||||||||||||||||  ||||||||||    
T  762268 tgattagtagtgttaattttaatgataaaatgtgttacatttactaaa 762221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 664
Target Start/End: Complemental strand, 33293830 - 33293787
Alignment:
Q  621 tttgtcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||    
T  33293830 tttgtccccttaatcaatgttctaagggcactctttaacatttc 33293787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 710
Target Start/End: Original strand, 44433956 - 44433991
Alignment:
Q  675 ataattgattaatagtgttgattttaatgataaaat 710  Q
    ||||||||||||| ||||||||||||||||||||||    
T  44433956 ataattgattaattgtgttgattttaatgataaaat 44433991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 589
Target Start/End: Original strand, 49045262 - 49045345
Alignment:
Q  506 ctagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttca 589  Q
    ||||| ||| |||| |||||| | ||||||| |||||||| || ||||||||||| ||| |||| ||||| ||| |||||||||    
T  49045262 ctagtgaagaaaacaaaaaatggtaagtttgcattgaattaaataattttttaacttttcaaaagtcaaaactaatacttttca 49045345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 2734357 - 2734407
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    |||||| |||||| ||||||||||||| |||||||||||||| ||| ||||    
T  2734357 taaattcaataggtttaattaaacaggggtaatacagtaaaagtaagcata 2734407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 4849445 - 4849479
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaa 323  Q
    ||||||||||||||||||||| |||||||||||||    
T  4849445 taacattttgattaaattaaacagggttaattaaa 4849479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 4850189 - 4850219
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  4850189 taacattttgattaaattaaatagggttaat 4850219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 7855264 - 7855234
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  7855264 taacattttgattaaattaaatagggttaat 7855234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 17172635 - 17172665
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  17172635 taacattttgattaaattaaatagggttaat 17172665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 21669532 - 21669502
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  21669532 taacattttgattaaattaaatagggttaat 21669502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 24682592 - 24682562
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  24682592 taacattttgattaaattaaatagggttaat 24682562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 27733254 - 27733224
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  27733254 taacattttgattaaattaaatagggttaat 27733224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 34406568 - 34406618
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    ||||||||||||| ||||||||||||| |||||||| ||||| ||| ||||    
T  34406568 taaattaaataggtttaattaaacaggggtaatacaataaaagtaaacata 34406618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 35155789 - 35155759
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  35155789 taacattttgattaaattaaatagggttaat 35155759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 503 - 545
Target Start/End: Complemental strand, 37848461 - 37848419
Alignment:
Q  503 acactagttaaggaaactaaaaatagaaagtttgtattgaatt 545  Q
    |||||||||||||||||||||||||| |||| || ||||||||    
T  37848461 acactagttaaggaaactaaaaatagtaagtctgcattgaatt 37848419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 39277991 - 39278021
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  39277991 taacattttgattaaattaaatagggttaat 39278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 39648282 - 39648252
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  39648282 taacattttgattaaattaaatagggttaat 39648252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 689 - 723
Target Start/End: Original strand, 41499076 - 41499110
Alignment:
Q  689 gtgttgattttaatgataaaatgtgttttatttac 723  Q
    ||||||||||||||||||||||| |||||||||||    
T  41499076 gtgttgattttaatgataaaatgagttttatttac 41499110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 44806319 - 44806349
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  44806319 taacattttgattaaattaaatagggttaat 44806349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 48527712 - 48527682
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  48527712 taacattttgattaaattaaatagggttaat 48527682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 49144335 - 49144305
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  49144335 taacattttgattaaattaaatagggttaat 49144305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 49145210 - 49145150
Alignment:
Q  289 taacattttgattaaattaaataggg---ttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||   ||||||||| |||  |||||||||||||||||    
T  49145210 taacattttgattaaattaaacagggtaattaattaaatagggttaatacagtaaaattaa 49145150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 2733600 - 2733641
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaa 342  Q
    |||||| |||||| ||||||||||||| ||||||||||||||    
T  2733600 taaattcaataggtttaattaaacaggggtaatacagtaaaa 2733641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 17171358 - 17171415
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||  |||||||||| ||| ||||||||| |||  |||||||||||||||||    
T  17171358 taacattttatttaaattaaacaggattaattaaatagggttaatacagtaaaattaa 17171415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 24684068 - 24684011
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| || |||||||||| | |  ||||||||||| |||||    
T  24684068 taacattttgattaaattaaacagtgttaattaaatatggttaatacagtaagattaa 24684011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 34406311 - 34406352
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaa 342  Q
    |||||| |||||| ||||||||||||| ||||||||||||||    
T  34406311 taaattcaataggtttaattaaacaggggtaatacagtaaaa 34406352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 288 - 350
Target Start/End: Original strand, 5489 - 5551
Alignment:
Q  288 ataacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcat 350  Q
    ||||||||||||||||||||| |||||||||||||| | | ||||||||||||||||||||||    
T  5489 ataacattttgattaaattaattagggttaattaaatatgggtaatacagtaaaattaatcat 5551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 3e-16; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 536 - 648
Target Start/End: Original strand, 24288494 - 24288601
Alignment:
Q  536 gtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaatacatcctttttaagtttgtcctcttaacc 635  Q
    |||||||||||||||||||| |||| ||| |||| | |||||||| |||||||     |||||||  ||||||| | ||| |||||||||||||||||||    
T  24288494 gtattgaattcaacaattttgtaacttttaaaaagttaaatctatcacttttc-----accatttctcaatacaacatttctaagtttgtcctcttaacc 24288588  T
Q  636 aatgtcctaaggg 648  Q
    |||||| ||||||    
T  24288589 aatgtcttaaggg 24288601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 536 - 648
Target Start/End: Complemental strand, 24373727 - 24373620
Alignment:
Q  536 gtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaatacatcctttttaagtttgtcctcttaacc 635  Q
    |||||||||||||||||||| |||| ||| |||| | |||||||| ||||||||     ||||||  ||||||| | ||| |||||||||||||||||||    
T  24373727 gtattgaattcaacaattttgtaacttttaaaaagttaaatctatcacttttca-----ccatttctcaatacaacatttctaagtttgtcctcttaacc 24373633  T
Q  636 aatgtcctaaggg 648  Q
    |||||| ||||||    
T  24373632 aatgtcttaaggg 24373620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 669
Target Start/End: Complemental strand, 12349635 - 12349520
Alignment:
Q  547 aacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaag 646  Q
    |||||||||||||| ||| |||| |||||||||| ||||||||     ||||||||  ||||| | ||||||| ||||||||||||||||||| ||||||    
T  12349635 aacaattttttaacttttaaaaagtcaaatctatcacttttca-----ccattttcatatacaacatttttaaatttgtcctcttaaccaatgccctaag 12349541  T
Q  647 ggcactctttaacatttctctta 669  Q
    ||  ||||||| |||||| ||||    
T  12349540 gg--ctctttagcatttccctta 12349520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 753117 - 753060
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  753117 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 753060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 288 - 353
Target Start/End: Original strand, 38096794 - 38096859
Alignment:
Q  288 ataacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    |||| ||||||||||||||||||||| ||||||||||| | |||||||||||||| ||| ||||||    
T  38096794 ataagattttgattaaattaaataggtttaattaaacatgggtaatacagtaaaagtaagcataga 38096859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 43137322 - 43137265
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||    
T  43137322 taacattttgattaaattaaacagggttaattaaatagggttaatacagtaaaattaa 43137265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 552 - 660
Target Start/End: Complemental strand, 41871964 - 41871856
Alignment:
Q  552 ttttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaatacatcctttttaagtttgtcctcttaaccaatgtcctaagggcac 651  Q
    ||||||||| ||| |||| |||||| ||| |||||   ||||||||||||  |||||| | ||||||| ||||| |||||||||||||||| | || |||    
T  41871964 ttttttaacttttcaaaagtcaaatgtatcactttaattttcaccattttttaatacaacatttttaaatttgtgctcttaaccaatgtccaatggacac 41871865  T
Q  652 tctttaaca 660  Q
    |||||||||    
T  41871864 tctttaaca 41871856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 288 - 351
Target Start/End: Original strand, 38096648 - 38096711
Alignment:
Q  288 ataacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||| ||||    
T  38096648 ataagattttgattaaattaaataggtttaattaaacaggggtaatacattaaaagtaagcata 38096711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 2181841 - 2181898
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||| ||||||||| |||| ||||||| |||||||||    
T  2181841 taacattttgattaaattaaacaggattaattaaataggattaatacattaaaattaa 2181898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 2182580 - 2182637
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||||||||||||||| |||||||||| |||  |||||||| ||||||||    
T  2182580 taacattttgattaaattaaatagagttaattaaatagggttaatacaggaaaattaa 2182637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 3087470 - 3087413
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| | ||||||||||| |||| |||||||||||||||||    
T  3087470 taacattttgatcaaattaaacatggttaattaaataggattaatacagtaaaattaa 3087413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 12419493 - 12419437
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||||||||||||| |||||||||||| |||  |||||||||||||||||    
T  12419493 taacattttgattaaattaaat-gggttaattaaatagggttaatacagtaaaattaa 12419437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 26601598 - 26601541
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| | ||||||||||| |||  |||||||||||||||||    
T  26601598 taacattttgattaaattaaacatggttaattaaatagggttaatacagtaaaattaa 26601541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 38096953 - 38097005
Alignment:
Q  299 attaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  38096953 attaaattaaataggtttaattaaacaggggtaatacagtaaaagtaagcata 38097005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 34726307 - 34726256
Alignment:
Q  293 attttgattaaattaaatagggttaattaaacaggagtaatacagtaaaatt 344  Q
    ||||||||||||||||| ||||||||||||| |||  |||||||||||||||    
T  34726307 attttgattaaattaaacagggttaattaaatagggttaatacagtaaaatt 34726256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 591
Target Start/End: Original strand, 2970122 - 2970192
Alignment:
Q  521 aaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatt 591  Q
    |||| ||| ||||||| ||| ||||||||||||||||||| ||| |||||| |||||||| | ||||||||    
T  2970122 aaaagtagtaagtttgcatttaattcaacaattttttaacttttaaaaaattaaatctatcatttttcatt 2970192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 560
Target Start/End: Complemental strand, 24012617 - 24012579
Alignment:
Q  522 aaaatagaaagtttgtattgaattcaacaattttttaac 560  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  24012617 aaaatggaaagtttgtattgaattcaacaattttttaac 24012579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 6304106 - 6304053
Alignment:
Q  293 attttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||| ||| ||||||||| |||  |||||||||||||||||    
T  6304106 attttgattaaattaaacaggattaattaaatagggttaatacagtaaaattaa 6304053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 36885830 - 36885773
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| | ||||||||||| |||  |||||||||||||||||    
T  36885830 taacattttgatcaaattaaacatggttaattaaatagggttaatacagtaaaattaa 36885773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 42976957 - 42976900
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| | ||||||||||| |||  |||||||||||||||||    
T  42976957 taacattttgatcaaattaaacatggttaattaaatagggttaatacagtaaaattaa 42976900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 560
Target Start/End: Complemental strand, 12349716 - 12349660
Alignment:
Q  504 cactagttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaac 560  Q
    |||||||||||||||  |||||| | ||||||| | |||||||||||||||||||||    
T  12349716 cactagttaaggaaataaaaaatggtaagtttgcaatgaattcaacaattttttaac 12349660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 35394108 - 35394160
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    ||||||||||||| ||||||||| ||| |||||||||||||| ||| ||||||    
T  35394108 taaattaaataggtttaattaaataggggtaatacagtaaaagtaagcataga 35394160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 664
Target Start/End: Original strand, 678430 - 678580
Alignment:
Q  509 gttaaggaaactaaaaatagaaagtttgtattgaattcaacaattttttaaccttttaaaaatcaaatctattacttttcatttcaccattttccaatac 608  Q
    ||||||||||| |||| ||| | ||||  | || |||||||||||||||||| ||| |||  | ||||  ||||||     |||||||||||||||||||    
T  678430 gttaaggaaaccaaaattagcaggtttacaatggattcaacaattttttaacttttaaaaggttaaattcattact-----tttcaccattttccaatac 678524  T
Q  609 atcctttttaagtttgtcctcttaaccaatgtcctaagggcactctttaacatttc 664  Q
    | |  || ||  |||||||||||||||||||   ||||||||||||| | ||||||    
T  678525 aacaattctatttttgtcctcttaaccaatgctttaagggcactcttcagcatttc 678580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 3086750 - 3086692
Alignment:
Q  264 atttgtttattttgctttca-taaca--taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||| ||||  |||||  |||||||||||||||||||||||||||||||    
T  3086750 atttgtttattttgatttccctaacaattaacattttgattaaattaaatagggttaat 3086692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 680 - 727
Target Start/End: Complemental strand, 9637923 - 9637876
Alignment:
Q  680 tgattaatagtgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    ||||||||| ||||||||||||||||||||| ||| | ||||||||||    
T  9637923 tgattaataatgttgattttaatgataaaatatgtgtcatttactaaa 9637876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 355
Target Start/End: Original strand, 17547565 - 17547620
Alignment:
Q  301 taaattaaatagggttaattaaaca-ggagtaatacagtaaaattaatcatagatt 355  Q
    ||||||||||||| ||||||||||| || |||||||||||||| ||| ||||||||    
T  17547565 taaattaaataggtttaattaaacagggggtaatacagtaaaagtaagcatagatt 17547620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 33705687 - 33705632
Alignment:
Q  291 acattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||| | ||||| ||||| |||  |||||||||||||||||    
T  33705687 acattttgattaaattaaacatggttatttaaatagggttaatacagtaaaattaa 33705632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 288 - 351
Target Start/End: Original strand, 35393461 - 35393524
Alignment:
Q  288 ataacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    |||| ||||||||||||||||||| | ||||||||||| | |||||||| ||||| ||| ||||    
T  35393461 ataagattttgattaaattaaatatgtttaattaaacaagggtaatacaataaaagtaagcata 35393524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 38937380 - 38937438
Alignment:
Q  264 atttgtttattttgctttc-ataaca--taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||| | |||| ||||||  |||||||||||||||||||||||||||||||    
T  38937380 atttgtttatttcgatttccataacaattaacattttgattaaattaaatagggttaat 38937438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 752370 - 752340
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  752370 taacattttgattaaattaaatagggttaat 752340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 16679690 - 16679720
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  16679690 taacattttgattaaattaaatagggttaat 16679720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 17636986 - 17636956
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  17636986 taacattttgattaaattaaatagggttaat 17636956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 25695838 - 25695808
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  25695838 taacattttgattaaattaaatagggttaat 25695808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 30181152 - 30181182
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  30181152 taacattttgattaaattaaatagggttaat 30181182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 33705056 - 33705026
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  33705056 taacattttgattaaattaaatagggttaat 33705026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 34719199 - 34719229
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  34719199 taacattttgattaaattaaatagggttaat 34719229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 34725560 - 34725530
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  34725560 taacattttgattaaattaaatagggttaat 34725530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 35394267 - 35394317
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    |||||| |||||| |||||||||||||| ||||||||||||| ||| ||||    
T  35394267 taaatttaataggtttaattaaacaggaataatacagtaaaagtaagcata 35394317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 36885081 - 36885051
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  36885081 taacattttgattaaattaaatagggttaat 36885051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 41692883 - 41692913
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  41692883 taacattttgattaaattaaatagggttaat 41692913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 42975690 - 42975660
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  42975690 taacattttgattaaattaaatagggttaat 42975660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 42976321 - 42976291
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  42976321 taacattttgattaaattaaatagggttaat 42976291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 43136575 - 43136545
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  43136575 taacattttgattaaattaaatagggttaat 43136545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 753860 - 753803
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| || |||||||||| | |  ||||||||||| |||||    
T  753860 taacattttgattaaattaaacagtgttaattaaatatggttaatacagtaagattaa 753803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 6304854 - 6304797
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| |  |||||||||| | |  |||||||||||||||||    
T  6304854 taacattttgattaaattaaacaatgttaattaaatatggttaatacagtaaaattaa 6304797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 17637741 - 17637685
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||||| |||||||| ||||||||||||| |||  ||||| |||||||||||    
T  17637741 taacattttgatcaaattaaacagggttaattaaatagggttaata-agtaaaattaa 17637685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 34717922 - 34717979
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||  |||||||||| ||| ||||||||| |||  |||||||||||||||||    
T  34717922 taacattttatttaaattaaacaggattaattaaatagggttaatacagtaaaattaa 34717979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 43137954 - 43137897
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| || |||||||||| | |  ||||||||||| |||||    
T  43137954 taacattttgattaaattaaacagtgttaattaaatatggttaatacagtaagattaa 43137897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 698 - 755
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| | ||||||||||| |||  |||||||||||||||||    
T  698 taacattttgattaaattaaacatggttaattaaatagggttaatacagtaaaattaa 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 3883 - 3826
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||||| |||||||||||    
T  3883 taacattttgattaaattaaacagggttaattaaatagggttaatatagtaaaattaa 3826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 3145 - 3115
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  3145 taacattttgattaaattaaatagggttaat 3115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 232305 - 232362
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||||||||| |||||||    
T  232305 taacattttgattaaattaaacagggttaattaaatagggttaatacagtcaaattaa 232362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 232944 - 232996
Alignment:
Q  294 ttttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| ||||| || |||  |||||||||||||||||    
T  232944 ttttgattaaattaaatagggataatttaatagggttaatacagtaaaattaa 232996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 9624 - 9678
Alignment:
Q  299 attaaattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||| ||| ||||||    
T  9624 attaaattaaataggtttaattaaacaggggtaatacattaaaagtaagcataga 9678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 34; Significance: 0.000000001; HSPs: 4)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 14026 - 14067
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaa 342  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  14026 taaattaaataggtttaattaaacaggggtaatacagtaaaa 14067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 13407 - 13459
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcataga 353  Q
    ||||||||| ||| ||||||||||||| |||||||||||||| ||| ||||||    
T  13407 taaattaaaaaggtttaattaaacaggggtaatacagtaaaagtaagcataga 13459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 13569 - 13619
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    ||||||||||||| ||||||||| ||| |||||||||||||| ||| ||||    
T  13569 taaattaaataggtttaattaaataggggtaatacagtaaaagtaagcata 13619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 13717 - 13767
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaattaatcata 351  Q
    ||||||||||||| ||||||||||||  |||||||||||||| ||| ||||    
T  13717 taaattaaataggtttaattaaacagaggtaatacagtaaaagtaagcata 13767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 9642 - 9585
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    ||||||||||||||||||||| | || |||||||| |||  |||||||||||||||||    
T  9642 taacattttgattaaattaaacatggataattaaatagggttaatacagtaaaattaa 9585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 8891 - 8861
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  8891 taacattttgattaaattaaatagggttaat 8861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 680 - 727
Target Start/End: Complemental strand, 126275 - 126228
Alignment:
Q  680 tgattaatagtgttgattttaatgataaaatgtgttttatttactaaa 727  Q
    |||||||||||||| |||||||||| ||||||||| | ||||||||||    
T  126275 tgattaatagtgtttattttaatgacaaaatgtgtatcatttactaaa 126228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 10959 - 10989
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  10959 taacattttgattaaattaaatagggttaat 10989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 26327 - 26297
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  26327 taacattttgattaaattaaatagggttaat 26297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 14753 - 14783
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  14753 taacattttgattaaattaaatagggttaat 14783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 14389 - 14419
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  14389 taacattttgattaaattaaatagggttaat 14419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 17702 - 17672
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  17702 taacattttgattaaattaaatagggttaat 17672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 18335 - 18278
Alignment:
Q  289 taacattttgattaaattaaatagggttaattaaacaggagtaatacagtaaaattaa 346  Q
    |||||||||  |||||||||| ||| ||||||||| |||  |||||||||||||||||    
T  18335 taacattttatttaaattaaacaggattaattaaatagggttaatacagtaaaattaa 18278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 55300 - 55330
Alignment:
Q  289 taacattttgattaaattaaatagggttaat 319  Q
    |||||||||||||||||||||||||||||||    
T  55300 taacattttgattaaattaaatagggttaat 55330  T

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Target: scaffold0891 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 2059 - 2100
Alignment:
Q  301 taaattaaatagggttaattaaacaggagtaatacagtaaaa 342  Q
    ||||||||||||| ||||||||||| | ||||||||||||||    
T  2059 taaattaaataggtttaattaaacaagggtaatacagtaaaa 2100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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