View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14803_high_15 (Length: 286)
Name: NF14803_high_15
Description: NF14803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14803_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 10 - 269
Target Start/End: Original strand, 47318613 - 47318866
Alignment:
| Q |
10 |
tgtgtaacatgaatgattgataatcctcatacttggctcttacggttaagtatttattattaacaacattacatacacttgtcaccaacaaagtattgga |
109 |
Q |
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| T |
47318613 |
tgtgtaagatgaatgattgataatcctcatacttggctcttacggttaagtatt----attaacaacattacatacacttgtcaccaacaaagtattgga |
47318708 |
T |
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| Q |
110 |
cagatagtatcttatactcattccaattttaaatacgcatccaatccaacnnnnnnnntcagaaatgagaggagtaatttgattgataagatgagaatga |
209 |
Q |
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| T |
47318709 |
cagatagtatcttatactcattccaattttaaatacgcatccaatccaac--aaaaattcagaaatgagagaagtaatttgattgataagatgagaatga |
47318806 |
T |
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| Q |
210 |
ataataacactattgtatgaagtagccactgagaaaaagggcaaagaaaaacaacaaagt |
269 |
Q |
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| T |
47318807 |
ataataacactattgtatgaagtagccactgagaaaaagggcaaagaaaaacaacaaagt |
47318866 |
T |
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