View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14806_low_15 (Length: 282)
Name: NF14806_low_15
Description: NF14806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14806_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 2 - 266
Target Start/End: Complemental strand, 35170977 - 35170713
Alignment:
| Q |
2 |
atgaatataaacaagaatactatctaattaggacgtataatactatcatatgtatatatccttattcaaaccaaaagtaatattgatatcaaaattcaaa |
101 |
Q |
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| T |
35170977 |
atgaatataaacaagaatactatctaattaggacgtataatactaccatatgtatatatccttattcaaaccaaaagtaatattgatatcaaaattcaaa |
35170878 |
T |
|
| Q |
102 |
aagagagcaaaggtaaaccttttaaggaggacccagtttctgaaggctcggtagtataatgacccggaagcattttccaatatttaagagcttgtaaaac |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35170877 |
aagagagcaaaggtaaaccttttaaggaggacccagtttccgaaggctcggtagtataatgacccggaagcattttccaatatttaagagcttgtaaaac |
35170778 |
T |
|
| Q |
202 |
cgcatccctcaccggtttgacctataaacgattattcatatatacacatataagttagttaatga |
266 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35170777 |
cgcatccctcaccggtttgacctataaacgattattcatatatacacatataagttagttaatga |
35170713 |
T |
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