View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14806_low_17 (Length: 264)
Name: NF14806_low_17
Description: NF14806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14806_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 9059963 - 9060138
Alignment:
| Q |
16 |
ttttatacctctatctttttcctgttcaccaaatcnnnnnnnaataaataaaacacttgtttatttcattattttttatccatacaacattggacttgat |
115 |
Q |
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| T |
9059963 |
ttttatacctctatctttttcttgttcaccaaaactttttttaataaataaaacatttgtttatttcattattttttatccatacaacattggacttgat |
9060062 |
T |
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| Q |
116 |
atcctttcaacaatttcacaagcttacataatcttagcttgttcaagaaattaatgttaagaaggatgaccgaaga |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |
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| T |
9060063 |
atcctttcaacaatttcacaagcttacataatcttagcttattcaagaaattaatgttaagaaggatgatcgaaga |
9060138 |
T |
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