View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14806_low_6 (Length: 331)
Name: NF14806_low_6
Description: NF14806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14806_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 15428651 - 15428337
Alignment:
| Q |
1 |
aatggacagaaacgtatgtcgctagggttagtgacactggaaattggaataaaattgattgagccattggaagacaagcagaaacgagggttggtgtgat |
100 |
Q |
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| T |
15428651 |
aatggacagaaacgtatgtcgctagggttggtgacactggaaattggaataaaattgattgagccattggaagacaagcagaaacgagggttggtgtgat |
15428552 |
T |
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| Q |
101 |
tgattgtttgcatttttataataactacaattttatcacttatgattatgccattcaatcatcactctcacaaaacaacgacaaactttgcaatttggtc |
200 |
Q |
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| T |
15428551 |
tgattatttgcatttttataataactacagttttatcacttatgattatgccattcaatcatcactctcacaaaacaacgacaaaccttgcaatttggtc |
15428452 |
T |
|
| Q |
201 |
tgcagcgggtttagcgatcgtgtgtgaaataggaggggaggatcataacaacttgtgtgcctcacttatttcaaatgtctttgctatcttattcacaaac |
300 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15428451 |
tgcagggggtttagcgatcgtgtgtgaaataggaggggaggatcataacaacttgtgtgcctcacttatttcaaatgtctttgctatcttattcacaaac |
15428352 |
T |
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| Q |
301 |
agtttggtatttact |
315 |
Q |
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||||||||||||||| |
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| T |
15428351 |
agtttggtatttact |
15428337 |
T |
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