View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14808_high_16 (Length: 301)
Name: NF14808_high_16
Description: NF14808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14808_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 14 - 282
Target Start/End: Original strand, 6507098 - 6507366
Alignment:
| Q |
14 |
tgagaagaataggtagttgaagagacatcttgagttgtcattagtccatagcttggaatttcactccttggtggttggttaaaaatagctgaaagttcat |
113 |
Q |
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| T |
6507098 |
tgagaagaataggtagttgaagagacatcttgagttgtcattagtccatagcttggaatttcactccttggtggttggttaaaaatagctgaaagttcat |
6507197 |
T |
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| Q |
114 |
tgtaattgcaatcccataatccttcactataatcacttgtgttaatgttatatgcttcttgagagaatggagtgtagtcaaaaaatgattgaccatgcat |
213 |
Q |
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| T |
6507198 |
tgtaattgcaatcccataatccttcactataattacttgtgttaatgttatatgcttcttgagagaatggagtgtagtcaaaaaatgattgaccatgcat |
6507297 |
T |
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| Q |
214 |
gaagtttgttgtgctaatggaatcaacaacattttggtgttcacttgaatcacttgcattactcctatg |
282 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
6507298 |
gaagtttgttgtgcaaatggaatcaacaacattttggtgttcacttgaatcacttgcattactactatg |
6507366 |
T |
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