View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14808_low_22 (Length: 232)
Name: NF14808_low_22
Description: NF14808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14808_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 158; Significance: 3e-84; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 8445895 - 8446064
Alignment:
| Q |
49 |
ataaatgaacccacatacctaaagaaacgaaagagtaacaattattacattctttctgaattagaaataagcaattattacattacatgaaacctcgtaa |
148 |
Q |
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| T |
8445895 |
ataaatgaacccacatacctaaagaaacgaaagagtaacaattattacattctttctgaattagaaaaaagcaattattacattacatgaaacctcgtaa |
8445994 |
T |
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| Q |
149 |
tcacaaacatcgtatgaaacttgttaatattgaaattttaatagaagatagggtaaaatagtacacatat |
218 |
Q |
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| T |
8445995 |
tcacaaacatcgtatgaaactcgttaatattgaaattttaatagaagatagggtaaaatagtactcatat |
8446064 |
T |
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Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 8404358 - 8404431
Alignment:
| Q |
145 |
gtaatcacaaacatcgtatgaaacttgttaatattgaaattttaatagaagatagggtaaaatagtacacatat |
218 |
Q |
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| T |
8404358 |
gtaatcataaacatcgtatgaaactcattaatattacaattttaatataagacagggtaagatggtactcatat |
8404431 |
T |
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