View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14808_low_9 (Length: 356)
Name: NF14808_low_9
Description: NF14808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14808_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 7 - 338
Target Start/End: Complemental strand, 36867933 - 36867602
Alignment:
| Q |
7 |
tccaagaatattccaacaaaaatcaaatcaaaactgaggaatgaaaagcagaatctcaaactaagcagtcaaattcactttcaaaaccaggaagcatatg |
106 |
Q |
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| T |
36867933 |
tccaaaaatattccaacaagaatcaaatcaaaactgaggaatgaaaagcagaatctcaaactaagcagtcaaattcactttcaaaaccaggaagcatatg |
36867834 |
T |
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| Q |
107 |
ctaaaaccttgaaggagtaatagacatatgtgtatgaaaactgtttgatttaggtgctatgctcaatacatgatctataatatactatatttctcttttt |
206 |
Q |
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|||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36867833 |
ctaaaaacttgaaggaataatagacatatgtgtatgaaaactgtttgatttaggtgctatgctcaatacatgatctataatatactatatttctcttttt |
36867734 |
T |
|
| Q |
207 |
aagattatatagtttcttttaaggcaaattatataagattcctaatcatcctctccactctataaggaacagtcataattacacccaacaaatagtaact |
306 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36867733 |
aagattatatagtttcttttaaggcaaattatttaagattcctaatcatcctctccactctataaggaacagtcataattacacccaacaaatagtaact |
36867634 |
T |
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| Q |
307 |
taacaccataaaaggttagaaacctcttagat |
338 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
36867633 |
taacaccataaaaggttagaaacctcttagat |
36867602 |
T |
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