View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1480_high_8 (Length: 418)

Name: NF1480_high_8
Description: NF1480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1480_high_8
NF1480_high_8
[»] chr1 (31 HSPs)
chr1 (15-346)||(38837401-38837732)
chr1 (15-346)||(47298261-47298595)
chr1 (15-333)||(17677036-17677358)
chr1 (15-346)||(33166278-33166612)
chr1 (15-331)||(17785337-17785656)
chr1 (42-336)||(51522343-51522640)
chr1 (44-335)||(18318491-18318805)
chr1 (33-224)||(8470339-8470533)
chr1 (33-331)||(48406419-48406741)
chr1 (33-221)||(31470277-31470468)
chr1 (33-221)||(45241129-45241320)
chr1 (33-221)||(48386036-48386227)
chr1 (33-221)||(2475980-2476171)
chr1 (230-329)||(2475851-2475950)
chr1 (230-329)||(48385907-48386006)
chr1 (230-316)||(8470560-8470646)
chr1 (33-86)||(31469996-31470049)
chr1 (33-93)||(8470261-8470321)
chr1 (230-329)||(31470498-31470597)
chr1 (230-329)||(45241350-45241449)
chr1 (25-71)||(51522304-51522350)
chr1 (33-86)||(31470197-31470250)
chr1 (33-93)||(8470300-8470360)
chr1 (30-91)||(31470114-31470177)
chr1 (33-93)||(31470158-31470218)
chr1 (30-91)||(31470233-31470296)
chr1 (30-91)||(45241085-45241148)
chr1 (30-91)||(48386208-48386271)
chr1 (30-86)||(48386254-48386312)
chr1 (42-86)||(45240976-45241020)
chr1 (42-86)||(48386295-48386339)
[»] chr8 (9 HSPs)
chr8 (15-346)||(30530339-30530673)
chr8 (25-335)||(17743675-17743988)
chr8 (25-330)||(27359156-27359485)
chr8 (25-330)||(27368513-27368842)
chr8 (33-224)||(15055638-15055832)
chr8 (33-221)||(1956140-1956331)
chr8 (230-329)||(1956011-1956110)
chr8 (230-329)||(15055860-15055959)
chr8 (34-91)||(1956312-1956371)
[»] scaffold1240 (1 HSPs)
scaffold1240 (15-331)||(438-757)
[»] chr4 (33 HSPs)
chr4 (34-344)||(33606095-33606408)
chr4 (15-346)||(34435248-34435575)
chr4 (66-331)||(36657582-36657849)
chr4 (15-338)||(53182149-53182460)
chr4 (91-333)||(28446348-28446593)
chr4 (33-224)||(16172705-16172899)
chr4 (33-221)||(8993777-8993968)
chr4 (33-221)||(13112555-13112746)
chr4 (33-221)||(46915330-46915521)
chr4 (33-221)||(2213136-2213326)
chr4 (33-221)||(3531116-3531307)
chr4 (33-221)||(3616105-3616296)
chr4 (15-93)||(33606037-33606115)
chr4 (230-329)||(3530987-3531086)
chr4 (230-329)||(3615976-3616075)
chr4 (230-329)||(8993998-8994097)
chr4 (230-329)||(13112776-13112875)
chr4 (230-329)||(46915201-46915300)
chr4 (33-86)||(2213435-2213488)
chr4 (246-331)||(16172577-16172662)
chr4 (33-86)||(46915630-46915683)
chr4 (256-329)||(2213007-2213080)
chr4 (33-86)||(3531334-3531387)
chr4 (15-54)||(36657570-36657609)
chr4 (30-91)||(3531288-3531351)
chr4 (30-91)||(8993733-8993796)
chr4 (30-91)||(13112511-13112574)
chr4 (33-93)||(16173046-16173106)
chr4 (30-86)||(3531455-3531513)
chr4 (42-86)||(3531496-3531540)
chr4 (42-86)||(8993624-8993668)
chr4 (42-86)||(13112402-13112446)
chr4 (33-93)||(16173085-16173145)
[»] chr3 (59 HSPs)
chr3 (15-331)||(33750654-33750975)
chr3 (16-331)||(50019091-50019409)
chr3 (15-330)||(26157830-26158148)
chr3 (162-336)||(33935416-33935590)
chr3 (223-346)||(33188782-33188905)
chr3 (185-344)||(51429136-51429295)
chr3 (15-127)||(33188909-33189021)
chr3 (33-221)||(6046189-6046380)
chr3 (33-221)||(17468505-17468696)
chr3 (33-221)||(25788561-25788752)
chr3 (33-221)||(42599216-42599407)
chr3 (33-221)||(47146362-47146553)
chr3 (33-221)||(25830518-25830709)
chr3 (33-221)||(30416317-30416508)
chr3 (33-224)||(42563001-42563195)
chr3 (33-221)||(10425513-10425704)
chr3 (47-224)||(21227202-21227382)
chr3 (33-166)||(51429021-51429141)
chr3 (264-333)||(30689548-30689617)
chr3 (230-329)||(6046060-6046159)
chr3 (230-329)||(30416188-30416287)
chr3 (33-86)||(25788779-25788832)
chr3 (33-86)||(25788926-25788979)
chr3 (33-86)||(25830736-25830789)
chr3 (33-86)||(25830883-25830936)
chr3 (33-86)||(47146036-47146089)
chr3 (33-86)||(47146202-47146255)
chr3 (148-224)||(21230380-21230456)
chr3 (33-93)||(42562769-42562829)
chr3 (230-329)||(10425384-10425483)
chr3 (230-329)||(17468726-17468825)
chr3 (230-329)||(25788432-25788531)
chr3 (230-329)||(42563222-42563321)
chr3 (230-329)||(42599087-42599186)
chr3 (230-329)||(47146583-47146682)
chr3 (33-91)||(47146323-47146381)
chr3 (256-329)||(25830389-25830462)
chr3 (33-86)||(42599434-42599487)
chr3 (30-82)||(42562805-42562857)
chr3 (33-86)||(6046448-6046501)
chr3 (33-86)||(6046610-6046663)
chr3 (33-86)||(6046731-6046784)
chr3 (33-86)||(42599553-42599606)
chr3 (30-91)||(17468461-17468524)
chr3 (30-91)||(30416489-30416552)
chr3 (30-91)||(42599388-42599451)
chr3 (33-93)||(42599466-42599526)
chr3 (30-91)||(42599507-42599570)
chr3 (27-91)||(25788733-25788799)
chr3 (27-91)||(25788880-25788946)
chr3 (27-91)||(25830690-25830756)
chr3 (27-91)||(25830837-25830903)
chr3 (33-91)||(42599626-42599686)
chr3 (42-86)||(6046852-6046896)
chr3 (30-83)||(10425816-10425871)
chr3 (42-86)||(10425854-10425898)
chr3 (42-86)||(17468352-17468396)
chr3 (42-86)||(30416617-30416661)
chr3 (33-85)||(42599593-42599645)
[»] scaffold0004 (3 HSPs)
scaffold0004 (27-344)||(104878-105198)
scaffold0004 (15-86)||(104788-104859)
scaffold0004 (27-93)||(104839-104905)
[»] chr6 (34 HSPs)
chr6 (27-316)||(18641290-18641582)
chr6 (27-316)||(24917344-24917636)
chr6 (75-224)||(8221243-8221395)
chr6 (33-221)||(17959151-17959342)
chr6 (132-335)||(24114234-24114456)
chr6 (33-221)||(633759-633950)
chr6 (33-221)||(6378283-6378474)
chr6 (33-221)||(34840500-34840691)
chr6 (15-93)||(24917609-24917687)
chr6 (33-93)||(8220864-8220924)
chr6 (15-93)||(18641239-18641317)
chr6 (232-331)||(8221424-8221523)
chr6 (230-329)||(34840721-34840820)
chr6 (33-86)||(633385-633438)
chr6 (33-86)||(633532-633585)
chr6 (33-86)||(633679-633732)
chr6 (33-86)||(6378501-6378554)
chr6 (33-86)||(6378648-6378701)
chr6 (33-93)||(8220903-8220963)
chr6 (230-329)||(17959022-17959121)
chr6 (256-329)||(634006-634079)
chr6 (256-329)||(6378154-6378227)
chr6 (33-93)||(8220942-8221002)
chr6 (33-93)||(8221148-8221208)
chr6 (30-91)||(17959323-17959386)
chr6 (27-91)||(633418-633484)
chr6 (27-91)||(633565-633631)
chr6 (27-91)||(633712-633778)
chr6 (27-91)||(6378455-6378521)
chr6 (27-91)||(6378602-6378668)
chr6 (34-93)||(24114148-24114207)
chr6 (33-91)||(34840459-34840519)
chr6 (37-69)||(8221191-8221223)
chr6 (42-86)||(17959451-17959495)
[»] chr7 (20 HSPs)
chr7 (27-344)||(32127959-32128279)
chr7 (34-330)||(26814175-26814474)
chr7 (33-224)||(22658938-22659132)
chr7 (33-221)||(22193305-22193496)
chr7 (33-221)||(36520521-36520712)
chr7 (230-329)||(22659159-22659258)
chr7 (15-86)||(26814117-26814188)
chr7 (15-86)||(32128298-32128369)
chr7 (33-93)||(32128252-32128312)
chr7 (33-86)||(22193078-22193131)
chr7 (33-86)||(22193225-22193278)
chr7 (230-329)||(36520742-36520841)
chr7 (256-329)||(22193552-22193625)
chr7 (33-93)||(22658693-22658753)
chr7 (27-91)||(22193111-22193177)
chr7 (27-91)||(22193258-22193324)
chr7 (33-84)||(22658573-22658624)
chr7 (40-91)||(22658622-22658673)
chr7 (33-93)||(22658654-22658714)
chr7 (34-91)||(36520481-36520540)
[»] chr2 (23 HSPs)
chr2 (42-335)||(31185960-31186255)
chr2 (25-335)||(31205674-31205990)
chr2 (127-331)||(4278260-4278462)
chr2 (15-212)||(40879700-40879898)
chr2 (33-221)||(8854088-8854279)
chr2 (33-221)||(9073773-9073964)
chr2 (33-221)||(30820470-30820661)
chr2 (33-221)||(7586390-7586581)
chr2 (33-221)||(12856968-12857159)
chr2 (230-329)||(7586261-7586360)
chr2 (33-86)||(8853926-8853979)
chr2 (33-86)||(12856888-12856941)
chr2 (230-329)||(8854309-8854408)
chr2 (230-329)||(30820341-30820440)
chr2 (256-329)||(12857215-12857288)
chr2 (230-329)||(9073644-9073743)
chr2 (35-86)||(9073991-9074042)
chr2 (30-91)||(7586562-7586625)
chr2 (30-91)||(9073945-9074008)
chr2 (30-91)||(30820642-30820705)
chr2 (27-91)||(12856921-12856987)
chr2 (42-86)||(7586690-7586734)
chr2 (42-86)||(30820770-30820814)
[»] chr5 (21 HSPs)
chr5 (225-346)||(34710303-34710424)
chr5 (33-224)||(29617379-29617573)
chr5 (33-224)||(30646715-30646908)
chr5 (33-221)||(4579098-4579289)
chr5 (33-221)||(40890816-40891007)
chr5 (33-221)||(32974211-32974402)
chr5 (33-329)||(27944645-27944965)
chr5 (230-329)||(40891037-40891136)
chr5 (241-331)||(30646587-30646677)
chr5 (230-329)||(29617253-29617352)
chr5 (230-329)||(32974082-32974181)
chr5 (33-86)||(27944483-27944536)
chr5 (33-93)||(27406294-27406354)
chr5 (256-329)||(4579345-4579418)
chr5 (30-91)||(4579054-4579117)
chr5 (31-91)||(4578934-4578996)
chr5 (33-82)||(4578977-4579026)
chr5 (33-70)||(27406278-27406315)
chr5 (33-91)||(32974383-32974443)
chr5 (34-91)||(27944443-27944502)
chr5 (37-93)||(29617719-29617775)
[»] scaffold0658 (2 HSPs)
scaffold0658 (219-335)||(6842-6958)
scaffold0658 (25-127)||(7035-7136)
[»] scaffold0007 (1 HSPs)
scaffold0007 (34-224)||(167191-167384)


Alignment Details
Target: chr1 (Bit Score: 292; Significance: 1e-164; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 15 - 346
Target Start/End: Complemental strand, 38837732 - 38837401
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaata 114  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  38837732 actagggactatcactgagaacttgacaacactgacaattattaaagcaaacactgaggtcttgacaacaccgacaattttgaccgaatacaaacaaata 38837633  T
Q  115 ttggattgcaattttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38837632 ttggattgcaattttcaaaacagctcacgctccaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtt 38837533  T
Q  215 tcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctt 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38837532 tcattttcttcaatctgtttttctcctgttgcaccaaggtgaactatttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctt 38837433  T
Q  315 tttcacttcctccaaggcagcagcatccttgc 346  Q
    ||||||||||||||||| |||||| |||||||    
T  38837432 tttcacttcctccaaggaagcagcgtccttgc 38837401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 15 - 346
Target Start/End: Complemental strand, 47298595 - 47298261
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaata 114  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| ||||| || |||||| ||||||||||||||||||||||||||||||||||||    
T  47298595 actagggaccatcactgaggactagacaacactgacaattattaaagcaaacattggggtctaaacaacactgacaattttgaccgaatacaaacaaata 47298496  T
Q  115 ttggattgcaatt---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacataca 211  Q
    |||||||||||||   ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  47298495 ttggattgcaattaatttcaaaacagctcacgctccaacttttccaacagctcttttttccggtcatcgagatactcttcggaacttaactttacataca 47298396  T
Q  212 gtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactc 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||    
T  47298395 gtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgcaccttgatttctttgaattcaatccactc 47298296  T
Q  312 ctttttcacttcctccaaggcagcagcatccttgc 346  Q
    ||||| ||||||||||||||||||||  |||||||    
T  47298295 cttttccacttcctccaaggcagcagtgtccttgc 47298261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 15 - 333
Target Start/End: Complemental strand, 17677358 - 17677036
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaata 114  Q
    ||||||| |||||| |||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17677358 actaggggctatcactgaggactagacaacattgacaattattaaaacaaacactaaggtctagacaacactgacaattttgaccgaatacaaacaaata 17677259  T
Q  115 ttggattgcaatt---ttcaaaacagctcacgctcaaacttttccaacaactcttttttcc-ggtcatcgagatgctcttcggaatttaactttacatac 210  Q
    |||||||||||||   ||||||| ||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  17677258 ttggattgcaattaatttcaaaatagctcacgctccaacttttccaacagctcttttttcccggtcatcgagatgctcttcggaacttaactttacatac 17677159  T
Q  211 agtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccact 310  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  17677158 agtttcattttcttcattctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgcaccttgatttctttgaattcaacccact 17677059  T
Q  311 cctttttcacttcctccaaggca 333  Q
    |||||| ||||||||||||||||    
T  17677058 ccttttccacttcctccaaggca 17677036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 15 - 346
Target Start/End: Original strand, 33166278 - 33166612
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaata 114  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| | ||  | ||||||||||||||||||||||||||||||||||||||||    
T  33166278 actagagactatcactgaggactagacaacactgacaattattaaagtaaaaattggagactagacaacactgacaattttgaccgaatacaaacaaata 33166377  T
Q  115 ttggattgcaatt---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacataca 211  Q
    || ||||| ||||   ||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||||| |||||||||||||||    
T  33166378 tttgattgaaattaatttcaaaacagctcacgctccaacttttccaacagctcttttttccggtcatcaagattctcttcggaacttaactttacataca 33166477  T
Q  212 gtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactc 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  33166478 gtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgcaccttgatttctttgaattcaacccactc 33166577  T
Q  312 ctttttcacttcctccaaggcagcagcatccttgc 346  Q
    | ||| ||| ||||||||| ||||||| |||||||    
T  33166578 cctttccacctcctccaagccagcagcgtccttgc 33166612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 331
Target Start/End: Original strand, 17785337 - 17785656
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaata 114  Q
    |||||||||||||| |||||||||||||||||| | ||||||||||| |||||||   | ||||||||||||||||||||||||||||||||||||| ||    
T  17785337 actagggactatcactgaggactagacaacactaataattattaaagcaaacactagagactagacaacactgacaattttgaccgaatacaaacaatta 17785436  T
Q  115 ttggattgcaatt---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacataca 211  Q
    || ||||| ||||   ||||||||||||||||||| || |||||||  | ||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  17785437 tttgattgaaattaatttcaaaacagctcacgctccaagttttccagtagctcttttttctagtcatcgagatgctcttcggaacttaactttacataca 17785536  T
Q  212 gtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactc 311  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  17785537 gtttcattttcttcaatctgtttttctcctgttgcaccaagttgtactctttcaattgttcaatctcttgcaccttgatttctttgaattcaacccactc 17785636  T
Q  312 ctttttcacttcctccaagg 331  Q
    ||||| |||  |||||||||    
T  17785637 cttttccaccacctccaagg 17785656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 42 - 336
Target Start/End: Original strand, 51522343 - 51522640
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---ttcaaaacagc 138  Q
    |||||||||||||||||||| ||||||||  | |||||||||||||||||||||||||||||||||||||||||| || || ||||   |||||||||||    
T  51522343 aacactgacaattattaaagcaaacactgtagactagacaacactgacaattttgaccgaatacaaacaaatatttgagtgaaattaatttcaaaacagc 51522442  T
Q  139 tcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttcttcaatctgtttttct 238  Q
    |||||||| ||||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||||||| | || ||||||| ||| |||||||||    
T  51522443 tcacgctccaacttttccaacagcactttcttccggtcatcgagatgctcttcggaacttaactttacatacaatgtccttttctttaatttgtttttct 51522542  T
Q  239 cctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaaggcagca 336  Q
    |||| |||||||||||||||||||||||||||||||||||||| |  ||||||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  51522543 cctgatgcaccaaggtgaactctttcaattgttcaatctcttggagcttgatttgtttgaattcaacccactccttttccacctcctccaaggcagca 51522640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 44 - 335
Target Start/End: Complemental strand, 18318805 - 18318491
Alignment:
Q  44 cactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---tttcaaaacagctc 140  Q
    |||||||||||||||||| ||||| || || ||||||||||||||||||||| |||||||||||||||||||| ||||| |||   |||  ||| |||||    
T  18318805 cactgacaattattaaagcaaacagtggggactagacaacactgacaattttaaccgaatacaaacaaatatttgattgaaattaattttcaaatagctc 18318706  T
Q  141 acgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttct----------------- 223  Q
    |||||| ||||||||||| | |||||| |||||||||||||||||||||||||||  |||||||| |||||||||||||||||                     
T  18318705 acgctccaacttttccaatagctctttcttccggtcatcgagatgctcttcggaa-ctaactttagatacagtttcattttcttatctttagtattttct 18318607  T
Q  224 ----tcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttca 319  Q
        ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||  | |||| || ||||||||||||||||||||||| ||    
T  18318606 ttcatcaatttgtttttctcctgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactccttttcca 18318507  T
Q  320 cttcctccaaggcagc 335  Q
    | ||||||||||||||    
T  18318506 cctcctccaaggcagc 18318491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 33 - 224
Target Start/End: Original strand, 8470339 - 8470533
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---tt 129  Q
    ||||||||||||||||| ||||||||||| ||||| || || |||||||||||||| ||||||||| |||||||||||||||||  |||  ||||   ||    
T  8470339 ggactagacaacactgataattattaaagcaaacattggggactagacaacactgataattttgactgaatacaaacaaatatttaattaaaattaactt 8470438  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttctt 224  Q
      |||||||||| |||| |||||| |||||| |||||  ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  8470439 ttaaacagctcaagctccaactttcccaacagctcttacttccggtcatcgagatgctcttcggaacttaactttagatacattttcattttctt 8470533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 33 - 331
Target Start/End: Original strand, 48406419 - 48406741
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---tt 129  Q
    |||||||| || |||||||| |||||||| |||||||  || |||||||||||||| ||||||||| ||||| ||||||||||| ||||  ||||   ||    
T  48406419 ggactagataatactgacaaatattaaagcaaacactcgggactagacaacactgataattttgactgaatataaacaaatatttgattaaaattaattt 48406518  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttctt----- 224  Q
      ||||||||||||||| |||||  ||||||||||||| || |||||||||||||||||||||||| ||||||||| ||||| ||||||||||||         
T  48406519 tcaaacagctcacgctccaacttccccaacaactctttctttcggtcatcgagatgctcttcggaacttaactttagatacattttcattttcttagctt 48406618  T
Q  225 ----------------caatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaaccca 308  Q
                    |||  |||||||||  |||| ||||||||| ||||||||||||||||||||||||||  | || | ||||||||||| ||||||    
T  48406619 cagtcttttcttgcagcaacttgtttttctgttgtttcaccaaggttaactctttcaattgttcaatctcttgctcctttaattctttgaattgaaccca 48406718  T
Q  309 ctcctttttcacttcctccaagg 331  Q
    |||||||| ||| | ||||||||    
T  48406719 ctccttttccaccttctccaagg 48406741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 31470277 - 31470468
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  31470277 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 31470376  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| ||||| ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  31470377 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 31470468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 45241129 - 45241320
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  45241129 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 45241228  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| ||||| ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  45241229 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 45241320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 48386227 - 48386036
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  48386227 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 48386128  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  48386127 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 48386036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 2476171 - 2475980
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  2476171 ggactagacaacactgacaaatattaaagcaaacagttgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 2476072  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||| ||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  2476071 tcaaacaactcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 2475980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 2475950 - 2475851
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  2475950 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 2475851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 48386006 - 48385907
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  48386006 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 48385907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 316
Target Start/End: Original strand, 8470560 - 8470646
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttt 316  Q
    |||||||||  |||| ||||||||| |||||||||||||||||| |||||||  | || | ||||||||||| ||||||||||||||    
T  8470560 tgtttttctgttgttccaccaaggttaactctttcaattgttcagtctcttgctcctttaattctttgaattgaacccactcctttt 8470646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 31469996 - 31470049
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  31469996 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 31470049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 8470261 - 8470321
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    ||||||||||||||||||||||||||||| |||||||| || ||| |||||||||| ||||    
T  8470261 ggactagacaacactgacaattattaaagcaaacactggggactaaacaacactgataatt 8470321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 31470498 - 31470597
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| ||||||  | ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  31470498 tgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 31470597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 45241350 - 45241449
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| ||||||  | ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  45241350 tgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 45241449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 51522304 - 51522350
Alignment:
Q  25 atcattgaggactagacaacactgacaattattaaagtaaacactga 71  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  51522304 atcattgaggacgagacaacactgacaattattaaagcaaacactga 51522350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 31470197 - 31470250
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  31470197 ggactagacaacactgataattattaaagcaaacagtgaggactagacaacact 31470250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 8470300 - 8470360
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    |||||| |||||||||| ||||||||||| |||||||| || |||||||||||||| ||||    
T  8470300 ggactaaacaacactgataattattaaagcaaacactggggactagacaacactgataatt 8470360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 31470114 - 31470177
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  31470114 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 31470177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 31470158 - 31470218
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||||    
T  31470158 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatt 31470218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 31470233 - 31470296
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  31470233 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 31470296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 45241085 - 45241148
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  45241085 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 45241148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 48386271 - 48386208
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  48386271 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 48386208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 48386312 - 48386254
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||  || ||||||||||| ||||| ||||| ||||||||||||    
T  48386312 tgaggactagacaacactctgataattattaaagcaaacagtgaggactagacaacact 48386254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 45240976 - 45241020
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  45240976 aacactgataattattaaagcaaacagtgaggactagacaacact 45241020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 48386339 - 48386295
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  48386339 aacactgataattattaaagcaaacagtgaggactagacaacact 48386295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 15 - 346
Target Start/End: Complemental strand, 30530673 - 30530339
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaata 114  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||    
T  30530673 actagggactatcactgaggactagacaacactgacaattattaaagtaaacgctcgggactagacaacactgacaattttgaccgaatacaaacaaata 30530574  T
Q  115 ttggattgcaatt---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacataca 211  Q
    || ||||| ||||   ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  30530573 tttgattgaaattaatttcaaaacagctcacgctccaacttttccaacagctcttttttccggtcatcgagatgctctttggaacttaactttacataca 30530474  T
Q  212 gtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactc 311  Q
     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  30530473 atttcattttcttcaatctgtttttctcctgttacaccaaggtgaactctttcaattgttcaatctcttgtaccttgatttgtttgaattcaacccactc 30530374  T
Q  312 ctttttcacttcctccaaggcagcagcatccttgc 346  Q
    ||||| ||| ||||| ||||||| ||| |||||||    
T  30530373 cttttccacctcctctaaggcagtagcgtccttgc 30530339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 25 - 335
Target Start/End: Original strand, 17743675 - 17743988
Alignment:
Q  25 atcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgca 124  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||| || ||||||||||||||||||| | |||||||||||||||||| | ||||| |    
T  17743675 atcactgaggactagacaacattgacaattattaaagcaaacactggggactagacaacactgacaattattaccgaatacaaacaaatagttgattgaa 17743774  T
Q  125 att---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
    |||   ||  ||||||||||||||| || |||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  17743775 attaatttgcaaacagctcacgctccaagttttccaacgtctcttttttccggtcatcgagatgctcttcggaacttaactttacatacaatttcatttt 17743874  T
Q  222 cttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcact 321  Q
    |||||||||||||||||||| ||||||   ||||||||||||||||| |||||||||||| || ||||||||||||||||||| ||||||||||| |||     
T  17743875 cttcaatctgtttttctcctattgcactgcggtgaactctttcaatttttcaatctcttgcaccttgatttctttgaattcaatccactccttttccacc 17743974  T
Q  322 tcctccaaggcagc 335  Q
    ||||||||||||||    
T  17743975 tcctccaaggcagc 17743988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 25 - 330
Target Start/End: Original strand, 27359156 - 27359485
Alignment:
Q  25 atcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgca 124  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||| ||  ||||||||| | ||||||||||||||||||||||||||||| ||||| |    
T  27359156 atcactgaggactagacaacattgacaattattaaagcaaacactggggattagacaacatttacaattttgaccgaatacaaacaaatatttgattgaa 27359255  T
Q  125 att---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
    |||   ||| ||||||||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||| ||||| |||||||||    
T  27359256 attaatttccaaacagctcacgctccaacttttccaacaactctttcttacggccatcgagatgctcttcggaacttaactttagatacattttcatttt 27359355  T
Q  222 ct---------------------tcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaat 300  Q
    ||                     ||||| |||||||||| |||| ||||||||| ||||||||||||||||||| ||||||  | || | ||||||||||    
T  27359356 cttagcttcagtcttttctttcatcaatttgtttttctcttgtttcaccaaggttaactctttcaattgttcaacctcttgctcctttaattctttgaat 27359455  T
Q  301 tcaacccactcctttttcacttcctccaag 330  Q
    |||||||||||||||| ||| |||||||||    
T  27359456 tcaacccactccttttccacctcctccaag 27359485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 25 - 330
Target Start/End: Original strand, 27368513 - 27368842
Alignment:
Q  25 atcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgca 124  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||| ||  ||||||||| | ||||||||||||||||||||||||||||| ||||| |    
T  27368513 atcactgaggactagacaacattgacaattattaaagcaaacactggggattagacaacatttacaattttgaccgaatacaaacaaatatttgattgaa 27368612  T
Q  125 att---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
    |||   ||| ||||||||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||| ||||| |||||||||    
T  27368613 attaatttccaaacagctcacgctccaacttttccaacaactctttcttacggccatcgagatgctcttcggaacttaactttagatacattttcatttt 27368712  T
Q  222 ct---------------------tcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaat 300  Q
    ||                     ||||| |||||||||| |||| ||||||||| ||||||||||||||||||| ||||||  | || | ||||||||||    
T  27368713 cttagcttcagtcttttctttcatcaatttgtttttctcttgtttcaccaaggttaactctttcaattgttcaaactcttgctcctttaattctttgaat 27368812  T
Q  301 tcaacccactcctttttcacttcctccaag 330  Q
    |||||||||||||||| ||| |||||||||    
T  27368813 tcaacccactccttttccacctcctccaag 27368842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 33 - 224
Target Start/End: Original strand, 15055638 - 15055832
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---tt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||||||||| ||||||||||||||||| ||||  ||||   ||    
T  15055638 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataattttgactgaatacaaacaaatatttgattaaaattaattt 15055737  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttctt 224  Q
      ||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  15055738 tcaaacagctcacgctccaacttccccaacagctccttcttccggtcatcgagatgctcttcggaacttaactttagatacattttcattttctt 15055832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 1956331 - 1956140
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  1956331 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 1956232  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  1956231 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 1956140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 1956110 - 1956011
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  1956110 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 1956011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 15055860 - 15055959
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| ||||||||| ||||||||||||||||||||||||||  | || | ||||||||||| ||||||||| |||| ||| | ||||||    
T  15055860 tgtttttctgttgtttcaccaaggttaactctttcaattgttcaatctcttgctcctttaattctttgaattgaacccactcattttccaccttctccaa 15055959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 1956371 - 1956312
Alignment:
Q  34 gactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  1956371 gactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 1956312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1240 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold1240
Description:

Target: scaffold1240; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 15 - 331
Target Start/End: Complemental strand, 757 - 438
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||| ||    
T  757 actagggactatcattgaggactagacaacactgacaattattaaagcaaacactggggactatacaacactgacaattttgaccgaatacaaacaatta 658  T
Q  115 ttggattgcaatt---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacataca 211  Q
    || ||||| ||||   ||| ||||||||||||||| || |||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  657 tttgattgaaattaatttccaaacagctcacgctccaagttttccaacagctctttttcccggtcatcgagatgctcttcggaacttaactttacataca 558  T
Q  212 gtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactc 311  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  557 gtttcattttcttcaatctgtttttctcctgttgcaccaaggtgtactctttcaattgttcaatctcttgcaccttgatttctttgaattcaacccactc 458  T
Q  312 ctttttcacttcctccaagg 331  Q
    ||||| |||  |||||||||    
T  457 cttttccaccccctccaagg 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 216; Significance: 1e-118; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 34 - 344
Target Start/End: Original strand, 33606095 - 33606408
Alignment:
Q  34 gactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---ttc 130  Q
    |||||||||||||| ||||||||||||||||||| || |  ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||   |||    
T  33606095 gactagacaacactaacaattattaaagtaaacattgggaactagacaacactgacaattttgaccgaataccaacaaatatttgattgaaattaatttc 33606194  T
Q  131 aaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttcttcaatct 230  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  33606195 aaaacagctcacgctccaactcttccaacaactcttttttccggtcatcgagatgctcttcggaacttaactttacatatagtttcaatttcttcaatct 33606294  T
Q  231 gtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaag 330  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||| ||| |||||||||    
T  33606295 gtttttctcctgttgcaccaacgtgaactctttcaattgttcaatctcttgcaccttgatttctttgaattgaacccactccttttccacctcctccaag 33606394  T
Q  331 gcagcagcatcctt 344  Q
     ||||||| |||||    
T  33606395 ccagcagcgtcctt 33606408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 15 - 346
Target Start/End: Complemental strand, 34435575 - 34435248
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaata 114  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| |||||||  || |||||||||| |||||||||||||||||||||||||||||    
T  34435575 actagggactatcactgaggactagacaacactaacaattattaaagcaaacactagggactagacaacattgacaattttgaccgaatacaaacaaata 34435476  T
Q  115 ttggattgcaat---tttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacataca 211  Q
    || ||||| |||   |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||       || |||||||||||||||    
T  34435475 tttgattgaaattaatttcaaaatagctcacgctccaacttttccaacaactcttttttccggtcgtcgagatgc-------aacttaactttacataca 34435383  T
Q  212 gtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactc 311  Q
     |||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  34435382 atttcattttcttcaatttgtttttctcttgttgcaccaagttgaactctttcaattgttcaatctcttgcaccttgatttctttgaattcaacccactc 34435283  T
Q  312 ctttttcacttcctccaaggcagcagcatccttgc 346  Q
    ||||| ||| ||||| ||||||||||| |||||||    
T  34435282 cttttccacctcctcgaaggcagcagcgtccttgc 34435248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 66 - 331
Target Start/End: Original strand, 36657582 - 36657849
Alignment:
Q  66 cactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---ttcaaaacagctcacgctcaaacttttccaacaac 162  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||| ||||   ||  ||||||||||||||| || ||||| |||| |    
T  36657582 cactgaggactagacaacactgacaattttgaccaaatacaaacaaatatttgattgaaattaattttcaaacagctcacgctccaagttttctaacagc 36657681  T
Q  163 tcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctt 262  Q
    | ||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  36657682 tattttttc-ggtcattgagatgctcttcggaacttaactttacatacagtttcattttcttcaatctgtttttctccttttgcaccaaggtgtactctt 36657780  T
Q  263 tcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaagg 331  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  36657781 tcaattgttcaatctcttgcaccttgatttctttgaattcaatccactccttttccacctcctccaagg 36657849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 15 - 338
Target Start/End: Complemental strand, 53182460 - 53182149
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaata 114  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||||||||||||||    
T  53182460 actagggactatcactgaggactagacaatactgacaattattaaagtaaacattgggacctagacaacactgacaattttgaccgaatacaaacaaata 53182361  T
Q  115 ttggattgcaattttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtt 214  Q
    ||            |||||||||||||||| | || |||||||||| |||||||||||||||||| ||||||||||| ||| ||||||||| ||||| ||    
T  53182360 tt------------tcaaaacagctcacgcaccaagttttccaacagctcttttttccggtcatcaagatgctcttcagaacttaactttagatacattt 53182273  T
Q  215 tcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctt 314  Q
    |||||||| ||||||||||||||||||||||||||  |||| | |||||||| |||||||||||||   | |||||||||||||||| ||||||||||||    
T  53182272 tcattttcgtcaatctgtttttctcctgttgcaccttggtgtagtctttcaaatgttcaatctctttatccttgatttctttgaattgaacccactcctt 53182173  T
Q  315 tttcacttcctccaaggcagcagc 338  Q
    || ||| ||||||||| |||||||    
T  53182172 ttccacctcctccaagccagcagc 53182149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 91 - 333
Target Start/End: Original strand, 28446348 - 28446593
Alignment:
Q  91 attttgaccgaatacaaacaaatattggattgcaatt---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgct 187  Q
    |||||||| ||||||||||||||||| ||||| ||||   ||||||||| ||||  | | ||||||||||||| |||||| |||||||||| ||||||||    
T  28446348 attttgactgaatacaaacaaatatttgattgaaattaatttcaaaacaactcaaacaccaacttttccaacatctctttcttccggtcattgagatgct 28446447  T
Q  188 cttcggaatttaactttacatacagtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtacttt 287  Q
    |||||| | ||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28446448 cttcgggacttaactttacatacaatttcattttctttaatttgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgcacttt 28446547  T
Q  288 gatttctttgaattcaacccactcctttttcacttcctccaaggca 333  Q
    ||||| ||||||||||||||||||||||| | | ||||||||||||    
T  28446548 gatttgtttgaattcaacccactccttttccccctcctccaaggca 28446593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 33 - 224
Target Start/End: Complemental strand, 16172899 - 16172705
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---tt 129  Q
    ||||||| |||||||||||| |||||||| |||||||  || ||||| |||||||| ||||||||| ||||||||||||||||| ||||  ||||   ||    
T  16172899 ggactaggcaacactgacaaatattaaagcaaacactcgggactagataacactgataattttgactgaatacaaacaaatatttgattaaaattaattt 16172800  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttctt 224  Q
    | ||||||||||||||| |||||| |||||| |||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  16172799 ccaaacagctcacgctccaactttcccaacagctctttcttccggtcatcgagatgctcttcggaacttaactttagatacattttcattttctt 16172705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 8993777 - 8993968
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  8993777 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 8993876  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  8993877 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 8993968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 13112555 - 13112746
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  13112555 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 13112654  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  13112655 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 13112746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 46915521 - 46915330
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  46915521 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 46915422  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| ||||| ||||||| ||| || ||||||||||||| ||||||||||    ||||||||| ||||| |||||||||    
T  46915421 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgacatgctcttcgtcccttaactttagatacattttcatttt 46915330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 2213326 - 2213136
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---tt 129  Q
    ||||||||||||| |||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  ||||   ||    
T  2213326 ggactagacaaca-tgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 2213228  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| ||||| ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  2213227 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 2213136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 3531307 - 3531116
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |   | |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  3531307 ggactagacaacactgacaaatattaaagcaaacagtcgagactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 3531208  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      |||||||||| |||| |||||  |||||| ||| || ||||||||||||||||||||||||   |||||||||| ||||| |||||||||    
T  3531207 tcaaacagctcatgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcctttaactttagatacattttcatttt 3531116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 3616296 - 3616105
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  3616296 ggactagacaacactgacaaatattaaagcaaacagttgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 3616197  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||| ||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  3616196 tcaaacaactcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 3616105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 33606037 - 33606115
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||  | |||||||||||| ||||||    
T  33606037 actagggactatcactgaggactagacaacactgtcaattattaaagtaaacattggagactagacaacactaacaatt 33606115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 3531086 - 3530987
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  3531086 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 3530987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 3616075 - 3615976
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  3616075 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 3615976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 8993998 - 8994097
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  8993998 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 8994097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 13112776 - 13112875
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  13112776 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 13112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 46915300 - 46915201
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  46915300 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 46915201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 2213488 - 2213435
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  2213488 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 2213435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 331
Target Start/End: Complemental strand, 16172662 - 16172577
Alignment:
Q  246 caccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaagg 331  Q
    |||||| || ||||||||||||||||||||||||||  | || | ||||||||||| |||||||||||||| ||| | ||||||||    
T  16172662 caccaaagttaactctttcaattgttcaatctcttgctcctttaattctttgaattgaacccactccttttccaccttctccaagg 16172577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 46915683 - 46915630
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  46915683 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 46915630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 2213080 - 2213007
Alignment:
Q  256 aactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  2213080 aactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 2213007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 3531387 - 3531334
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||    
T  3531387 ggactagacaacactgacaaatattaaagcaaacagtgaggactagacaacact 3531334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 36657570 - 36657609
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaatt 54  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  36657570 actagggactatcactgaggactagacaacactgacaatt 36657609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 3531351 - 3531288
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  3531351 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 3531288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 8993733 - 8993796
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  8993733 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 8993796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 13112511 - 13112574
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  13112511 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 13112574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 16173106 - 16173046
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    ||||||||||||||||| ||||||||||| ||||| |  || |||||||||||||| ||||    
T  16173106 ggactagacaacactgataattattaaagcaaacagtcgggactagacaacactgataatt 16173046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 3531513 - 3531455
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||  || ||||||||||| ||||| ||||| ||||||||||||    
T  3531513 tgaggactagacaacactctgataattattaaagcaaacagtgaggactagacaacact 3531455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 3531540 - 3531496
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  3531540 aacactgataattattaaagcaaacagtgaggactagacaacact 3531496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 8993624 - 8993668
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  8993624 aacactgataattattaaagcaaacagtgaggactagacaacact 8993668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 13112402 - 13112446
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  13112402 aacactgataattattaaagcaaacagtgaggactagacaacact 13112446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 16173145 - 16173085
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    ||||||||||||||||| | ||||||||| ||||| |  || |||||||||||||| ||||    
T  16173145 ggactagacaacactgatatttattaaagcaaacagtcgggactagacaacactgataatt 16173085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 201; Significance: 1e-109; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 15 - 331
Target Start/End: Original strand, 33750654 - 33750975
Alignment:
Q  15 actagggactatcattgaggactagacaacactga--caattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaa 112  Q
    |||||||||||||| |||||| |||||||||||||  |||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||     
T  33750654 actagggactatcactgaggattagacaacactgaaacaattattaaagcaaacactggggactagacaacactgacaattttgaccgaatacaaacaat 33750753  T
Q  113 tattggattgcaatt---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacata 209  Q
    |||| ||||| ||||   ||| ||| ||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  33750754 tatttgattgaaattaatttccaaaaagctcacgctccaagttttccaacacctcttttttccggtcatcgagatgctcttcggaacttaactttacata 33750853  T
Q  210 cagtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccac 309  Q
    || |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  33750854 caatttcattttcttcaatctgtttttctcctgttgcaccatggtgtactctttcaattgttcaatatcttgcaccttgatttctttgaattcaacccac 33750953  T
Q  310 tcctttttcacttcctccaagg 331  Q
    || |||| |||  |||||||||    
T  33750954 tctttttccaccacctccaagg 33750975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 331
Target Start/End: Original strand, 50019091 - 50019409
Alignment:
Q  16 ctagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatat 115  Q
    ||||||||||||| | ||||||| |||| ||| ||||||||||||| |||||||| || |||||||||||| |||||||||| |||||||||||||||||    
T  50019091 ctagggactatcactaaggactatacaaaactaacaattattaaagcaaacactggggactagacaacactaacaattttgatcgaatacaaacaaatat 50019190  T
Q  116 tggattgcaatt---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacag 212  Q
    | ||||| ||||   ||| ||||||||||||||| || |||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  50019191 ttgattgaaattaatttccaaacagctcacgctccaagttttccaacaactcttttttctagtcatcgagatgctcttcggaacttaactttacatacag 50019290  T
Q  213 tttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcc 312  Q
    |||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  50019291 tttcattttcttcaatatgtttttctcatgttgcaccaaggtgtactctttcaattgttcaatctctttcaccttgatttctttgaattcaacccactcc 50019390  T
Q  313 tttttcacttcctccaagg 331  Q
    ||||  || ||||||||||    
T  50019391 ttttctacctcctccaagg 50019409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 15 - 330
Target Start/End: Complemental strand, 26158148 - 26157830
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaata 114  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||| || || ||||||||||||||||||||||||||||||||| ||||||    
T  26158148 actagggactatcactgaggactagacaacactgacacttattaaagtaaacattggggactagacaacactgacaattttgaccgaatacaaccaaata 26158049  T
Q  115 ttggattgcaat---tttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacataca 211  Q
    || || || |||   |||||||||| ||||||  | ||||  ||||||||| ||||||| |||||||| ||||||||||| ||| |||||||||||||||    
T  26158048 tttgactgaaattaatttcaaaacaactcacgtaccaactcctccaacaacgctttttttcggtcatcaagatgctcttcagaacttaactttacataca 26157949  T
Q  212 gtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactc 311  Q
    |||||||||||||||||||  |||||||||||||   | || ||||||||||||||||||||||||||    | ||||||||||||| || |||||||||    
T  26157948 gtttcattttcttcaatctaattttctcctgttgattcgagttgaactctttcaattgttcaatctctctatccttgatttctttgacttgaacccactc 26157849  T
Q  312 ctttttcacttcctccaag 330  Q
    ||||| ||| | |||||||    
T  26157848 cttttccacctgctccaag 26157830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 162 - 336
Target Start/End: Original strand, 33935416 - 33935590
Alignment:
Q  162 ctcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactct 261  Q
    |||||||||||||||||| ||||||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||  |||| |||||    
T  33935416 ctcttttttccggtcatcaagatgctcttcagaacttaactttagatacattttcattttcttcaatctgtttttctcctgttgcaccttggtgtactct 33935515  T
Q  262 ttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaaggcagca 336  Q
    ||||| ||||||||||||||  | |||||||||||||||| |||||||||||||| ||| ||||||||| |||||    
T  33935516 ttcaaatgttcaatctcttgctccttgatttctttgaattgaacccactccttttccacctcctccaagccagca 33935590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 223 - 346
Target Start/End: Complemental strand, 33188905 - 33188782
Alignment:
Q  223 ttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcactt 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||| |||||    
T  33188905 ttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgcaccttgatttatttgaattcaacccactccttttccactt 33188806  T
Q  323 cctccaaggcagcagcatccttgc 346  Q
    |||||||||||||||| |||||||    
T  33188805 cctccaaggcagcagcgtccttgc 33188782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 185 - 344
Target Start/End: Original strand, 51429136 - 51429295
Alignment:
Q  185 gctcttcggaatttaactttacatacagtttcattttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtac 284  Q
    ||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||  |||| |||||||||| |||||||||||||   |    
T  51429136 gctcttcagaagttaactttagatacattttcattttcttcaatctgtttttctcctgttgcaccttggtgtactctttcaaatgttcaatctctttatc 51429235  T
Q  285 tttgatttctttgaattcaacccactcctttttcacttcctccaaggcagcagcatcctt 344  Q
     |||||||||||||||| |||||||||||||| ||| ||||||||| ||||||| |||||    
T  51429236 cttgatttctttgaattgaacccactccttttccacctcctccaagccagcagcgtcctt 51429295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 33189021 - 33188909
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaata 114  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33189021 actagggactatcaccgaggactagacaacactgacaattattaaaacaaacactgaggtctagacaacactaacaattttgaccgaatacaaacaaata 33188922  T
Q  115 ttggattgcaatt 127  Q
     ||||||||||||    
T  33188921 ctggattgcaatt 33188909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 6046380 - 6046189
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| | ||| |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  6046380 ggactagacaacactgacaaatattaaagcaaacagtcaggactagacaacactgataatgttgacggaatacaaacaaatatttgattaaaattaattt 6046281  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||   |||||||||| ||||| |||||||||    
T  6046280 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcctttaactttagatacattttcatttt 6046189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 17468505 - 17468696
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  17468505 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 17468604  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| ||||| ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  17468605 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 17468696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 25788752 - 25788561
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  25788752 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 25788653  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| ||||| ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  25788652 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 25788561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 42599407 - 42599216
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  42599407 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 42599308  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| ||||| ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  42599307 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 42599216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 47146362 - 47146553
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  47146362 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 47146461  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| ||||| ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  47146462 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 47146553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 25830709 - 25830518
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  25830709 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 25830610  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| || || ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  25830609 tcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 25830518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 30416508 - 30416317
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  30416508 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 30416409  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  30416408 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 30416317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 33 - 224
Target Start/End: Original strand, 42563001 - 42563195
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---tt 129  Q
    |||| ||||||||||||||| |||||||| |||||    || |||||||||||| | ||| ||||| ||||||||||||||||| ||||  ||||   ||    
T  42563001 ggaccagacaacactgacaaatattaaagcaaacagacgggactagacaacactaataatgttgactgaatacaaacaaatatttgattaaaattaattt 42563100  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttctt 224  Q
      ||||||||||||||| |||||  |||||| ||| || |||||||||||||||||||||||| || ||||||||| ||||| ||||||||||||    
T  42563101 tcaaacagctcacgctccaacttccccaacagctccttcttccggtcatcgagatgctcttcgaaacttaactttagatacattttcattttctt 42563195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 10425704 - 10425513
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  10425704 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 10425605  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| |||||  |||||| ||| || ||| ||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  10425604 tcaaacagctcacgctccaacttccccaacagctcattcttctggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 10425513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 21227202 - 21227382
Alignment:
Q  47 tgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---tttcaaaacagctcacg 143  Q
    ||||||||||||||| |||||| | || || |||||||||| ||| |||||||||||||||||||||| | ||||| |||   |||| |||||| ||  |    
T  21227202 tgacaattattaaagcaaacaccggggacttgacaacactgccaagtttgaccgaatacaaacaaataattgattgaaattaatttccaaacagttcttg 21227301  T
Q  144 ctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttctt 224  Q
      | |||||| |||||| |||||| ||||||||||||||||||||||  ||| ||| ||||| ||||| ||||||||||||    
T  21227302 gcccaactttcccaacatctctttcttccggtcatcgagatgctctttagaacttagctttagatacattttcattttctt 21227382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 51429021 - 51429141
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaattttcaa 132  Q
    ||||||||||||||||||||||||||||||||||| || |  |||||||||| ||||||||||||||||||||||||||||            |||||||    
T  51429021 ggactagacaacactgacaattattaaagtaaacattgggaactagacaaca-tgacaattttgaccgaatacaaacaaat------------ttttcaa 51429107  T
Q  133 aacagctcacgctcaaacttttccaacaactctt 166  Q
    |||||||||||||| || |||||||||| |||||    
T  51429108 aacagctcacgctccaagttttccaacagctctt 51429141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 30689617 - 30689548
Alignment:
Q  264 caattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaaggca 333  Q
    |||||||||||||||||| || |||||||||||||||| |||||||||||||  ||| ||||||||||||    
T  30689617 caattgttcaatctcttgcaccttgatttctttgaattgaacccactcctttcccacctcctccaaggca 30689548  T

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Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 6046159 - 6046060
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  6046159 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 6046060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 30416287 - 30416188
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  30416287 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 30416188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 25788832 - 25788779
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  25788832 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 25788779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 25788979 - 25788926
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  25788979 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 25788926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 25830789 - 25830736
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  25830789 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 25830736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 25830936 - 25830883
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  25830936 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 25830883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 47146036 - 47146089
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  47146036 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 47146089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 47146202 - 47146255
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  47146202 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 47146255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 21230456 - 21230380
Alignment:
Q  148 aacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttctt 224  Q
    |||||||||||||  ||||| ||| |||||||||||||||||| |||| ||| ||||| ||||| ||||||||||||    
T  21230456 aacttttccaacatatctttcttctggtcatcgagatgctctttggaacttatctttatatacattttcattttctt 21230380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 42562769 - 42562829
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    ||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||| ||||    
T  42562769 ggactagacaacactgataattattaaagcaaacagtgaggactagacaacactgataatt 42562829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 10425483 - 10425384
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| |  |||||||||| |||||| ||||||| ||| | ||||||    
T  10425483 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaagtctttgaattgaacccattccttttccaccttctccaa 10425384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 17468726 - 17468825
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| ||||||  | ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  17468726 tgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 17468825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 25788531 - 25788432
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| ||||||  | ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  25788531 tgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 25788432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 42563222 - 42563321
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  | || | ||||||||||| |||||| ||||||| ||| | ||||||    
T  42563222 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcctttaattctttgaattgaacccattccttttccacattctccaa 42563321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 42599186 - 42599087
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| ||||||  | ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  42599186 tgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 42599087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 47146583 - 47146682
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| ||||||  | ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  47146583 tgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 47146682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 47146323 - 47146381
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    |||||||||||||||||||| |||||||| |||||||  || |||||||||||||||||    
T  47146323 ggactagacaacactgacaaatattaaagcaaacactacggactagacaacactgacaa 47146381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 25830462 - 25830389
Alignment:
Q  256 aactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  25830462 aactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 25830389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 42599487 - 42599434
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  42599487 ggactagacaacactgataattattaaagcaaacagtgaggactagacaacact 42599434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 42562805 - 42562857
Alignment:
Q  30 tgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaa 82  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||    
T  42562805 tgaggactagacaacactgataattattaaagcaaacaatgagggctagacaa 42562857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 6046501 - 6046448
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||||||||||||||| |||||||| ||||| | ||| ||||||||||||    
T  6046501 ggactagacaacactgacaaatattaaagcaaacagtcaggactagacaacact 6046448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 6046663 - 6046610
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||||||||||||||| |||||||| ||||| | ||| ||||||||||||    
T  6046663 ggactagacaacactgacaaatattaaagcaaacagtcaggactagacaacact 6046610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 6046784 - 6046731
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||||||||||||||| |||||||| ||||| | ||| ||||||||||||    
T  6046784 ggactagacaacactgacaaatattaaagcaaacagtcaggactagacaacact 6046731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 42599606 - 42599553
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||||||||| || ||||||||||| ||||| ||||| ||||||||||||    
T  42599606 ggactagacaacaccgataattattaaagcaaacagtgaggactagacaacact 42599553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 17468461 - 17468524
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  17468461 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 17468524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 30416552 - 30416489
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  30416552 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 30416489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 42599451 - 42599388
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  42599451 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 42599388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 42599526 - 42599466
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||||    
T  42599526 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatt 42599466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 42599570 - 42599507
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  42599570 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 42599507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 25788799 - 25788733
Alignment:
Q  27 cattgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||| |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  25788799 cattggggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 25788733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 25788946 - 25788880
Alignment:
Q  27 cattgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||| |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  25788946 cattggggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 25788880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 25830756 - 25830690
Alignment:
Q  27 cattgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||| |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  25830756 cattggggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 25830690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 25830903 - 25830837
Alignment:
Q  27 cattgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||| |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  25830903 cattggggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 25830837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 42599686 - 42599626
Alignment:
Q  33 ggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  42599686 ggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 42599626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 6046896 - 6046852
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  6046896 aacactgataattattaaagcaaacagtgaggactagacaacact 6046852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 10425871 - 10425816
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaac 83  Q
    ||||||||||||||||||  || ||||||||||| ||||| ||||| |||||||||    
T  10425871 tgaggactagacaacactctgataattattaaagcaaacagtgaggactagacaac 10425816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 10425898 - 10425854
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  10425898 aacactgataattattaaagcaaacagtgaggactagacaacact 10425854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 17468352 - 17468396
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  17468352 aacactgataattattaaagcaaacagtgaggactagacaacact 17468396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 30416661 - 30416617
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  30416661 aacactgataattattaaagcaaacagtgaggactagacaacact 30416617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 42599645 - 42599593
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacac 85  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||    
T  42599645 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacac 42599593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 179; Significance: 2e-96; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 27 - 344
Target Start/End: Original strand, 104878 - 105198
Alignment:
Q  27 cattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat 126  Q
    ||||| ||| |||||||||||||||||||||||| |||||| || |  |||||||||||||||||||||||||||||||||||||||||| || || |||    
T  104878 cattggggattagacaacactgacaattattaaaataaacattgggaactagacaacactgacaattttgaccgaatacaaacaaatatttgactgaaat 104977  T
Q  127 t---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttct 223  Q
    |   ||||||||||||||| ||| ||||  ||||||  | |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  104978 taatttcaaaacagctcacactccaactcctccaaccgcgcttttttccggtcatcaagatgctcttcggaacttaactttacatacagtttcattttct 105077  T
Q  224 tcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttc 323  Q
    ||||||||||||||||||||||   | || ||||||||||||||||||||||||||||  | |||||||||||||||| |||||||||||||| ||| ||    
T  105078 tcaatctgtttttctcctgttgattcgagttgaactctttcaattgttcaatctcttgcgccttgatttctttgaattgaacccactccttttccacctc 105177  T
Q  324 ctccaaggcagcagcatcctt 344  Q
    ||||||| ||||| |||||||    
T  105178 ctccaagccagcaacatcctt 105198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 104788 - 104859
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||| || || ||||||||||||    
T  104788 actagggactatcactgaggactagacaacactgacatttattaaagtaaacattggggactagacaacact 104859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 104839 - 104905
Alignment:
Q  27 cattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    ||||| ||||||||||||||| ||| ||||||||||||||| || ||  ||||||||||||||||||    
T  104839 cattggggactagacaacactaacacttattaaagtaaacattggggattagacaacactgacaatt 104905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 179; Significance: 2e-96; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 27 - 316
Target Start/End: Original strand, 18641290 - 18641582
Alignment:
Q  27 cattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat 126  Q
    |||||| ||||| |||||| |||||||||||||| |||||| ||    ||||||||||||||||||||||| |||||||||||||||||| ||||| |||    
T  18641290 cattgaagactaaacaacattgacaattattaaactaaacattggaaactagacaacactgacaattttgaacgaatacaaacaaatatttgattgaaat 18641389  T
Q  127 t---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttct 223  Q
    |   ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||||||    
T  18641390 taatttcaaaacagctcacgctccaacttctccaacaactctttttttcggtcatcgagatgctcttcggaacttaactttatatacaatttcattttct 18641489  T
Q  224 tcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttt 316  Q
    ||||||| ||| |||||||||||||||||||||||| |||||||| |||||||||||| || || ||||||||||||||||||||||||||||    
T  18641490 tcaatctatttgtctcctgttgcaccaaggtgaactttttcaattcttcaatctcttgcaccttaatttctttgaattcaacccactcctttt 18641582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 27 - 316
Target Start/End: Complemental strand, 24917636 - 24917344
Alignment:
Q  27 cattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat 126  Q
    ||||| |||||||||||||||| |||||||||||||||||| ||    ||||||||||||||||||||||||| || ||||||||||||| || || |||    
T  24917636 cattggggactagacaacactggcaattattaaagtaaacattggatactagacaacactgacaattttgaccaaacacaaacaaatatttgactgaaat 24917537  T
Q  127 t---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttct 223  Q
    |   |||||||||||| || ||| ||||  ||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  24917536 taatttcaaaacagcttactctccaactcctccaacagctcttttttccggtcatcaagatgctcttcggaacttaactttacatacagtttcattttct 24917437  T
Q  224 tcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttt 316  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||    
T  24917436 tcaatttgtttttctcctgttgcatcaagttgaactctttcaattgttcaatctcttgggccttgatttctttgaattgaacccactcctttt 24917344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 75 - 224
Target Start/End: Original strand, 8221243 - 8221395
Alignment:
Q  75 ctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---ttcaaaacagctcacgctcaaacttttccaacaactcttttttc 171  Q
    |||||||||||||| ||||||||| ||||||||||||||||| ||||  ||||   ||  ||||||||||||||| |||||| |||||| |||||| |||    
T  8221243 ctagacaacactgataattttgactgaatacaaacaaatatttgattaaaattaattttcaaacagctcacgctccaactttcccaacagctctttcttc 8221342  T
Q  172 cggtcatcgagatgctcttcggaatttaactttacatacagtttcattttctt 224  Q
    |||||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  8221343 cggtcatcgagatgctcttcggaacttaactttagatacattttcattttctt 8221395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 17959342 - 17959151
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  17959342 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 17959243  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| ||||| ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  17959242 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 17959151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 132 - 335
Target Start/End: Original strand, 24114234 - 24114456
Alignment:
Q  132 aaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttct-------- 223  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| || ||  ||||||||||            
T  24114234 aaacagctcacgctccaacttttccaacaactctttcttccggtcatcgagatgctcttcggaacttaactttagatgcaacttcattttcttagcttca 24114333  T
Q  224 -----------tcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcc 312  Q
               ||||| |||||||||| |||||||||||||| ||||||||||||||||||| ||||||    |||| || ||||||||||| |||||||    
T  24114334 cttttccttcatcaatttgtttttctcatgttgcaccaaggttaactctttcaattgttcaagctcttgcttcttgaattgtttgaattcaatccactcc 24114433  T
Q  313 tttttcacttcctccaaggcagc 335  Q
    ||||  || ||||||||||||||    
T  24114434 ttttcaacctcctccaaggcagc 24114456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 633759 - 633950
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  633759 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 633858  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| || || ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  633859 tcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 633950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 6378474 - 6378283
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  6378474 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 6378375  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| || || ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  6378374 tcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 6378283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 34840500 - 34840691
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  34840500 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 34840599  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  34840600 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 34840691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 24917687 - 24917609
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||    
T  24917687 actagagactatcactgaggactagacaacactgacaattattaaagtaaacattggggactagacaacactggcaatt 24917609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 8220864 - 8220924
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    ||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||    
T  8220864 ggactagacaacactgacaattattaaagcaaacactggggactagacaacactgacaatt 8220924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 18641239 - 18641317
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||||||||| ||| | ||| |||||| ||||||||    
T  18641239 actagggactatcactgaggactatacaacactgataattattaaagtaaacattgaagactaaacaacattgacaatt 18641317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 331
Target Start/End: Original strand, 8221424 - 8221523
Alignment:
Q  232 tttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaagg 331  Q
    |||||||  |||| ||||||||| |||| |||||||||||||||||||||  | || | ||||||||||| |||||||||||||| ||| | ||||||||    
T  8221424 tttttcttttgtttcaccaaggttaactttttcaattgttcaatctcttgctcctttaattctttgaattgaacccactccttttccaccttctccaagg 8221523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 34840721 - 34840820
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  34840721 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 34840820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 633385 - 633438
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  633385 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 633438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 633532 - 633585
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  633532 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 633585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 633679 - 633732
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  633679 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 633732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 6378554 - 6378501
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  6378554 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 6378501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 6378701 - 6378648
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  6378701 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 6378648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 8220903 - 8220963
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    ||||||||||||||||||||||| ||||| |||||||| || |||||||||||||| ||||    
T  8220903 ggactagacaacactgacaattactaaagcaaacactggggactagacaacactgataatt 8220963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 17959121 - 17959022
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| ||||||  | ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  17959121 tgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 17959022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 634006 - 634079
Alignment:
Q  256 aactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  634006 aactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 634079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 6378227 - 6378154
Alignment:
Q  256 aactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  6378227 aactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 6378154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 8220942 - 8221002
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    ||||||||||||||||| ||||||||||| |||||||| || ||||| |||||||| ||||    
T  8220942 ggactagacaacactgataattattaaagcaaacactggggactagagaacactgataatt 8221002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 8221148 - 8221208
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    |||||| |||||||||||||||||||||| |||||||| ||  ||||||||||||| ||||    
T  8221148 ggactaaacaacactgacaattattaaagcaaacactggggattagacaacactgataatt 8221208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 17959386 - 17959323
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  17959386 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 17959323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 633418 - 633484
Alignment:
Q  27 cattgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||| |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  633418 cattggggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 633484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 633565 - 633631
Alignment:
Q  27 cattgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||| |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  633565 cattggggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 633631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 633712 - 633778
Alignment:
Q  27 cattgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||| |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  633712 cattggggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 633778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 6378521 - 6378455
Alignment:
Q  27 cattgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||| |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  6378521 cattggggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 6378455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 6378668 - 6378602
Alignment:
Q  27 cattgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||| |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  6378668 cattggggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 6378602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 24114148 - 24114207
Alignment:
Q  34 gactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    |||| |||| |||||||||||||||||| ||||  || || |||||||||||||||||||    
T  24114148 gacttgacaccactgacaattattaaagcaaactgtggggactagacaacactgacaatt 24114207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 34840459 - 34840519
Alignment:
Q  33 ggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  34840459 ggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 34840519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 8221191 - 8221223
Alignment:
Q  37 tagacaacactgacaattattaaagtaaacact 69  Q
    ||||||||||||| |||||||||||||||||||    
T  8221191 tagacaacactgataattattaaagtaaacact 8221223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 17959495 - 17959451
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  17959495 aacactgataattattaaagcaaacagtgaggactagacaacact 17959451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 175; Significance: 4e-94; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 27 - 344
Target Start/End: Complemental strand, 32128279 - 32127959
Alignment:
Q  27 cattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat 126  Q
    |||||||||||||||||||||||||||||||||| |||||| ||    ||||||||||||| |||||||||||||||||||||||||||| || || |||    
T  32128279 cattgaggactagacaacactgacaattattaaaataaacattggaaactagacaacactggcaattttgaccgaatacaaacaaatatttgactgaaat 32128180  T
Q  127 t---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttct 223  Q
    |   ||||||||||||||||||| ||||  ||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  32128179 taatttcaaaacagctcacgctccaactcctccaacaacgcttttttccggtcatcaagatgctcttcggaacttaactttacatacagtttcattttct 32128080  T
Q  224 tcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttc 323  Q
    ||||||| ||||||||||||||   | || ||||||||||||||||||||||||| ||  | |||||||||||||||| |||||||||||||| ||| |     
T  32128079 tcaatctttttttctcctgttgattcgagttgaactctttcaattgttcaatctcatgcgccttgatttctttgaattgaacccactccttttccacctg 32127980  T
Q  324 ctccaaggcagcagcatcctt 344  Q
    ||||||| || |||| |||||    
T  32127979 ctccaagccatcagcgtcctt 32127959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 34 - 330
Target Start/End: Original strand, 26814175 - 26814474
Alignment:
Q  34 gactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---ttc 130  Q
    |||||||||||||| ||| ||||||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||| || || ||||   |||    
T  26814175 gactagacaacactaacacttattaaagtaaacattggggactagacaacactgacaattttgaccaaatacaaacaaatatttgactgaaattaatttc 26814274  T
Q  131 aaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttcttcaatct 230  Q
    |||||||||||||||| ||||  ||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26814275 aaaacagctcacgctccaactcctccaacagcgcttttttccggtcatcaagatgctcttcggaacttaactttacatacagtttcattttcttcaatct 26814374  T
Q  231 gtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaag 330  Q
    ||||||||| |||||   | || ||||||||||||||||||||||||||||  | |||||||||||||||| |||||||||||||| ||| | |||||||    
T  26814375 gtttttctcatgttgattcgagttgaactctttcaattgttcaatctcttgcgccttgatttctttgaattgaacccactccttttccacctgctccaag 26814474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 224
Target Start/End: Original strand, 22658938 - 22659132
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| |||||||   | |||||||||||||| ||||||||| ||||||||||||||||| ||||  |||   |||    
T  22658938 ggactagacaacactgacaaatattaaagcaaacactcgagactagacaacactgataattttgactgaatacaaacaaatatttgattaaaattaattt 22659037  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttctt 224  Q
      ||||||||||||||| |||    |||||| |||||| |||||||||||||||||||||||| || ||||||||| ||||| ||||||||||||    
T  22659038 tcaaacagctcacgctccaacagccccaacagctctttcttccggtcatcgagatgctcttcgaaacttaactttagatacattttcattttctt 22659132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 22193305 - 22193496
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  22193305 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 22193404  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| || || ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  22193405 tcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 22193496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 36520521 - 36520712
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  36520521 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 36520620  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  36520621 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 36520712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 22659159 - 22659258
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| ||||||||| ||||||||||||||||||||||||||  | || | ||||||||||| |||||||||||||| ||| | ||||||    
T  22659159 tgtttttctgttgtttcaccaaggttaactctttcaattgttcaatctcttgctcctttaattctttgaattgaacccactccttttccaccttctccaa 22659258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 26814117 - 26814188
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||  | ||||||||||||    
T  26814117 actagggactatcactgaggactagacaacactgacatttattaaagtaaacattggagactagacaacact 26814188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 32128369 - 32128298
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||| |  || ||||||||||||    
T  32128369 actagggactatcactgaggactagacaacactgacatttattaaagtaaacattagggactagacaacact 32128298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 32128312 - 32128252
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    ||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||||||||||    
T  32128312 ggactagacaacactaacacttattaaagtaaacattgaggactagacaacactgacaatt 32128252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 22193078 - 22193131
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  22193078 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 22193131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 22193225 - 22193278
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  22193225 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 22193278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 36520742 - 36520841
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| |  |||||||||| |||||| ||||||| ||| | ||||||    
T  36520742 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaactctttgaattgaacccattccttttccaccttctccaa 36520841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 22193552 - 22193625
Alignment:
Q  256 aactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  22193552 aactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 22193625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 22658693 - 22658753
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    ||||||||||||||||| ||||||||||| ||||| | ||| |||||||||||||| ||||    
T  22658693 ggactagacaacactgataattattaaagcaaacagtcaggactagacaacactgataatt 22658753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 22193111 - 22193177
Alignment:
Q  27 cattgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||| |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  22193111 cattggggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 22193177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 22193258 - 22193324
Alignment:
Q  27 cattgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||| |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  22193258 cattggggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 22193324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 22658573 - 22658624
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaaca 84  Q
    ||||||||||||||||| ||||||||||| |||||  |||| ||||||||||    
T  22658573 ggactagacaacactgataattattaaagcaaacagggaggactagacaaca 22658624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 22658622 - 22658673
Alignment:
Q  40 acaacactgacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    |||||||||| ||||||||||| ||||| || || |||||||||||||||||    
T  22658622 acaacactgataattattaaagcaaacagtggggactagacaacactgacaa 22658673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 22658654 - 22658714
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    |||||||||||||||||||| |||||||| ||| | |  || |||||||||||||| ||||    
T  22658654 ggactagacaacactgacaaatattaaagcaaatagtcgggactagacaacactgataatt 22658714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 36520481 - 36520540
Alignment:
Q  34 gactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  36520481 gactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 36520540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 1e-91; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 42 - 335
Target Start/End: Complemental strand, 31186255 - 31185960
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---ttcaaaacagc 138  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||||||| | |||||||||||||||||||| ||||| ||||   ||  |||||||    
T  31186255 aacactgacaattattaaagaaaacactg-ggactagacaacactgacaattattaccgaatacaaacaaatatttgattgaaattaattttcaaacagc 31186157  T
Q  139 tcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttcttcaatctgtttttct 238  Q
    ||||| || || |||||||||| |||||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||||||| |||||    
T  31186156 tcacgttccaagttttccaacatctcttttttccggtcatcgagatgttctccggaacttaacattacatacagtttcattttcttcaatctgtatttct 31186057  T
Q  239 cctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaaggcagc 335  Q
    | |||||||||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  31186056 catgttgcaccgcggtgaactctttcaattgttcgatctcttgcaccttgatttctttgaattcaacccacttcttttccacctcctccaaggcagc 31185960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 25 - 335
Target Start/End: Complemental strand, 31205990 - 31205674
Alignment:
Q  25 atcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaa-cactgacaattttgaccgaatacaaacaaatattggattgc 123  Q
    |||| |||| ||||||||||||| ||||||||||||| |||||||| || |||||||| ||||||||||| | |||||||||||||||||||| |||||     
T  31205990 atcactgagaactagacaacactaacaattattaaagcaaacactggggactagacaaacactgacaattattaccgaatacaaacaaatatttgattga 31205891  T
Q  124 aatt---ttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattt 220  Q
    ||||   ||  |||||||||||  || || |||||||||| |||||||||||||||||||||||  ||||| ||| ||||| ||||||||||||||||||    
T  31205890 aattaattttcaaacagctcacattccaagttttccaacatctcttttttccggtcatcgagatattcttcagaacttaacattacatacagtttcattt 31205791  T
Q  221 tcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgat--ttctttgaattcaacccactcctttttc 318  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||| |||| ||| || |||||  || ||||||||||||||||||||||| |    
T  31205790 tcttcaatctgtttttctcctgttgcaccgcggtgaactctttcaattgttcgatctattgcaccttgattattttttgaattcaacccactccttttcc 31205691  T
Q  319 acttcctccaaggcagc 335  Q
    || ||||||||||||||    
T  31205690 acctcctccaaggcagc 31205674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 127 - 331
Target Start/End: Original strand, 4278260 - 4278462
Alignment:
Q  127 tttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttcttca 226  Q
    |||| ||||||||||||||| |||| |||||||| || |||||  ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  4278260 tttccaaacagctcacgctccaactcttccaacagctattttt--cggtcatcgagatgctcttcgaaacttaactttacatacagtttcattttcttca 4278357  T
Q  227 atctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctc 326  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| |||||    
T  4278358 atctgtttttctcctgttgcaccaaggtgaactctttaaattgttcaatctcttgcaccttgatttctttgaattcaacccactccttttccacctcctc 4278457  T
Q  327 caagg 331  Q
    |||||    
T  4278458 caagg 4278462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 15 - 212
Target Start/End: Complemental strand, 40879898 - 40879700
Alignment:
Q  15 actagggactatcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaata 114  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||  |||||||||||    
T  40879898 actaaggactatcaccgaggactagacaacactgacaattattaaagcaaacactggggactagacaacactgacaattttgaccga--acaaacaaata 40879801  T
Q  115 ttggattgcaat---tttcaaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacataca 211  Q
    || ||||| |||   |||||||||||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||| |||| |||||||||||||||    
T  40879800 tttgattgaaattaatttcaaaacagctcacgctccaacttttccaacagctcctttttccgatcatcgagatgctctttggaacttaactttacataca 40879701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 8854088 - 8854279
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    ||||||||||||||||||||| ||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  8854088 ggactagacaacactgacaatgattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 8854187  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| ||||| ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  8854188 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 8854279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 9073964 - 9073773
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  9073964 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 9073865  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| ||||| ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  9073864 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 9073773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 30820661 - 30820470
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  30820661 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 30820562  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| ||||| ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  30820561 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 30820470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 7586581 - 7586390
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  7586581 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 7586482  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  7586481 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 7586390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 12856968 - 12857159
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  12856968 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 12857067  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| || || ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  12857068 tcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 12857159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 7586360 - 7586261
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  7586360 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 7586261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 8853926 - 8853979
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  8853926 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 8853979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 12856888 - 12856941
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  12856888 ggactagacaacactgacaattattaaagtaaacattggggactagacaacact 12856941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 8854309 - 8854408
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| ||||||  | ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  8854309 tgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 8854408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 30820440 - 30820341
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| ||||||  | ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  30820440 tgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 30820341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 12857215 - 12857288
Alignment:
Q  256 aactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  12857215 aactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 12857288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 9073743 - 9073644
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| ||||||  | ||||||||||||||||||||||||||  |||| | ||||||||||| ||| || ||||||| ||| | ||||||    
T  9073743 tgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgcccttttaattctttgaattgaactcattccttttccaccttctccaa 9073644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 9074042 - 9073991
Alignment:
Q  35 actagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    ||||||||||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  9074042 actagacaacactgataattattaaagcaaacagtgaggactagacaacact 9073991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 7586625 - 7586562
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  7586625 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 7586562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 9074008 - 9073945
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  9074008 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 9073945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 30820705 - 30820642
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  30820705 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 30820642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 12856921 - 12856987
Alignment:
Q  27 cattgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||| |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  12856921 cattggggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 12856987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 7586734 - 7586690
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  7586734 aacactgataattattaaagcaaacagtgaggactagacaacact 7586690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 30820814 - 30820770
Alignment:
Q  42 aacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  30820814 aacactgataattattaaagcaaacagtgaggactagacaacact 30820770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 4e-48; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 225 - 346
Target Start/End: Original strand, 34710303 - 34710424
Alignment:
Q  225 caatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcc 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||| |||    
T  34710303 caatctgtttttctcctgttgcaccaaggtgaactctttcaattgctcaatctcttgcaccttgatttctttgaattcaacccactccttttccacctcc 34710402  T
Q  325 tccaaggcagcagcatccttgc 346  Q
    |||||||||||| |||||||||    
T  34710403 tccaaggcagcaacatccttgc 34710424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 224
Target Start/End: Complemental strand, 29617573 - 29617379
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---tt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| |||||||||  |||||||||||||||| ||||  ||||   ||    
T  29617573 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataattttgactaaatacaaacaaatatttgattaaaattaattt 29617474  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttctt 224  Q
      ||||||||||||||| |||||  |||||| |||||| || |||||||||||||||||||| ||| ||||||||| ||||| ||||||||||||    
T  29617473 tcaaacagctcacgctccaacttccccaacagctctttctttcggtcatcgagatgctcttcagaacttaactttagatacattttcattttctt 29617379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 224
Target Start/End: Complemental strand, 30646908 - 30646715
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| |||||||   | |||||||||||||| ||||||||| ||||||||||||||||| ||||  |||   |||    
T  30646908 ggactagacaacactgacaaatattaaagcaaacactcgtgactagacaacactgataattttgactgaatacaaacaaatatttgattaaaattaattt 30646809  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttctt 224  Q
      ||||||||||||||| ||||||||||||| ||||||  | ||||||||||||||||||||  || ||||||||| ||||| ||||||||||||    
T  30646808 tcaaacagctcacgctccaacttttccaacagctctttcattcggtcatcgagatgctcttcataacttaactttagataca-tttcattttctt 30646715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 4579098 - 4579289
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  4579098 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 4579197  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| ||||| ||||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  4579198 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 4579289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 221
Target Start/End: Original strand, 40890816 - 40891007
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||||| | ||| |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  40890816 ggactagacaacactgacaaatattaaagcaaacagtcaggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 40890915  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  40890916 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 40891007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 32974402 - 32974211
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaat---ttt 129  Q
    |||||||||||||||||||| |||||||| ||| | |  || |||||||||||||| ||| ||||| ||||||||||||||||| ||||  |||   |||    
T  32974402 ggactagacaacactgacaaatattaaagcaaatagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 32974303  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt 221  Q
      ||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||    
T  32974302 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttt 32974211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 33 - 329
Target Start/End: Original strand, 27944645 - 27944965
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---tt 129  Q
    |||||||||||||||||||| |||||||| ||||| |  |  ||||||| |||||| ||| ||||| ||||||||||||||||| ||||  ||||   ||    
T  27944645 ggactagacaacactgacaaatattaaagcaaacagtcggaactagacagcactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 27944744  T
Q  130 caaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcatttt-----ctt 224  Q
      ||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||||    ||||||||| ||||| |||||||||     |||    
T  27944745 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagatacattttcatttttttagctt 27944844  T
Q  225 caatct----------------gtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaaccca 308  Q
     |||||                ||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| ||||||    
T  27944845 gaatcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaaccca 27944944  T
Q  309 ctcctttttcacttcctccaa 329  Q
     ||||||| ||| | ||||||    
T  27944945 ttccttttccaccttctccaa 27944965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 40891037 - 40891136
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||||||| | ||||||    
T  40891037 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattcctttttcaccttctccaa 40891136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 30646677 - 30646587
Alignment:
Q  241 tgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaagg 331  Q
    |||| ||||||||| ||||||||||||||||||||||||||  | || | ||||||||||| |||||||||||||| ||| | ||||||||    
T  30646677 tgtttcaccaaggttaactctttcaattgttcaatctcttgctcctttaattctttgaattgaacccactccttttccaccttctccaagg 30646587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 29617352 - 29617253
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| ||||||||| |||||||||||||||||||| |||||  | || | ||||||||||| |||||||||||||| ||| | ||||||    
T  29617352 tgtttttctgttgtttcaccaaggttaactctttcaattgttcaatatcttgctcctttaattctttgaattgaacccactccttttccaccttctccaa 29617253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 329
Target Start/End: Complemental strand, 32974181 - 32974082
Alignment:
Q  230 tgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    |||||||||  |||| |||||| || ||||||||||||||||||||||||||  |||| | ||||||||||| |||||| ||||||| ||| | ||||||    
T  32974181 tgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcttttaattctttgaattgaacccattccttttccaccttctccaa 32974082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 27944483 - 27944536
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacact 86  Q
    |||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||    
T  27944483 ggactagacaacactgacaaatattaaagcaaacagtgaggactagacaacact 27944536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 27406354 - 27406294
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    ||||||||||||||||||||||||||||| ||||||   || |||||||||||||| ||||    
T  27406354 ggactagacaacactgacaattattaaagcaaacaccagggactagacaacactgataatt 27406294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 4579345 - 4579418
Alignment:
Q  256 aactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttcacttcctccaa 329  Q
    ||||||||||||||||||||||||||  |||| | ||||||||||| ||| || ||||||| ||| | ||||||    
T  4579345 aactctttcaattgttcaatctcttgctcttttaattctttgaattgaactcattccttttccaccttctccaa 4579418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 4579054 - 4579117
Alignment:
Q  30 tgaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  4579054 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 4579117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 4578934 - 4578996
Alignment:
Q  31 gaggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    |||||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  4578934 gaggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 4578996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 4578977 - 4579026
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactgaggtctagacaa 82  Q
    |||||||||||||||||||| |||||||| ||||| || || ||||||||    
T  4578977 ggactagacaacactgacaaatattaaagcaaacattggggactagacaa 4579026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 27406315 - 27406278
Alignment:
Q  33 ggactagacaacactgacaattattaaagtaaacactg 70  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  27406315 ggactagacaacactgataattattaaagcaaacactg 27406278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 32974443 - 32974383
Alignment:
Q  33 ggactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    |||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  32974443 ggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 32974383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 27944443 - 27944502
Alignment:
Q  34 gactagacaacact--gacaattattaaagtaaacactgaggtctagacaacactgacaa 91  Q
    ||||||||||||||  || ||||||||||| |||||||  || |||||||||||||||||    
T  27944443 gactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 27944502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 29617775 - 29617719
Alignment:
Q  37 tagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaatt 93  Q
    ||||||||||||| ||||||||||| ||||| |  || |||||||||||||| ||||    
T  29617775 tagacaacactgataattattaaagcaaacagtcgggactagacaacactgataatt 29617719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0658 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0658
Description:

Target: scaffold0658; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 6958 - 6842
Alignment:
Q  219 tttcttcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgtactttgatttctttgaattcaacccactcctttttc 318  Q
    |||| ||||| |||||||||| |||| ||||||||| ||||||||||||||||| |||||| |  | || | |||||||||||||||||||||||||| |    
T  6958 tttcatcaatttgtttttctcttgtttcaccaaggttaactctttcaattgttccatctctcgctcctttaattctttgaattcaacccactccttttcc 6859  T
Q  319 acttcctccaaggcagc 335  Q
    || ||||||||||||||    
T  6858 acctcctccaaggcagc 6842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0658; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 7136 - 7035
Alignment:
Q  25 atcattgaggactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgca 124  Q
    |||| ||||||||| |||||| ||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||||||||| |||| ||||| |    
T  7136 atcactgaggactatacaacattgacaattattaaagcaaacactggggactagacaacactgacaattttgaccg-atacaaacaactatttgattgaa 7038  T
Q  125 att 127  Q
    |||    
T  7037 att 7035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 224
Target Start/End: Complemental strand, 167384 - 167191
Alignment:
Q  34 gactagacaacactgacaattattaaagtaaacactgaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaatt---ttc 130  Q
    |||| |||| ||||||||||||||| || |||||||| || || ||||  |||||||| ||||||||||| |||||||||| | ||||| ||||   |||    
T  167384 gacttgacatcactgacaattattagagcaaacactggggacttgacactactgacaagtttgaccgaatgcaaacaaatacttgattgaaattaatttc 167285  T
Q  131 aaaacagctcacgctcaaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttctt 224  Q
     ||||| |||  |  | |||||||||||||||| ||| ||||||||||||| |||||| || ||| ||| ||||| ||||| ||||||||||||    
T  167284 caaacaactcttggcccaacttttccaacaactttttcttccggtcatcgaaatgctcctcagaacttagctttatatacattttcattttctt 167191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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