View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1480_low_35 (Length: 236)
Name: NF1480_low_35
Description: NF1480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1480_low_35 |
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Alignment Details
Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 36093514 - 36093728
Alignment:
| Q |
9 |
ccaagaaaatcagaatctgtttctgtgtacaatagatatatatatttt--tctttttcatgtttcattagttccaatcttgttcttttggcaggtgttct |
106 |
Q |
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| T |
36093514 |
ccaagaaaatcagaatctgtttctgtgtacaatagatatatttttttttttctttttcatgtttcattagttccaatcttgttcttttggcaggtgttct |
36093613 |
T |
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| Q |
107 |
gttgtttctgacagggaatgtgaagaaagtatgaatgaagattttcatcattgaatcatgttagaatacaaagagaataaaattttcagtgttactgaat |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
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| T |
36093614 |
gttgtttctgacagggaatgtgaagaaagtatgaatgaagattttcatcattgaatcatgttaggatacaaagagaataaaatttttagtgttactgaat |
36093713 |
T |
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| Q |
207 |
tatcatattcatatg |
221 |
Q |
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| T |
36093714 |
tatcatattcatatg |
36093728 |
T |
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