View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14810_high_4 (Length: 251)
Name: NF14810_high_4
Description: NF14810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14810_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 236
Target Start/End: Complemental strand, 34158699 - 34158481
Alignment:
| Q |
18 |
caaactccttagctcattgaagagcttgaagaagttctatggcctcaccttccttgacggttcccatacaactgctataccataaagcagctgtttagga |
117 |
Q |
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| T |
34158699 |
caaactccttagctcattgaagagcttgaagaagttctatggcctcaccttccttgacggttcccatacaactgctataccataaagcagctgtttagga |
34158600 |
T |
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| Q |
118 |
tctgaattcgtaagattttgcatttataatttgcaaaaactagaaaactttaacattgtaaaaatgacatggtgcatagtgaaccacttaaaggatttgt |
217 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34158599 |
tctgaattcgtgagattttgcatttataatttgcaaaaactagaaaactttaacattgtaaaaatgacatggtgcatagtgaaccacttaaaggatttgt |
34158500 |
T |
|
| Q |
218 |
attccaaacaatgcctatg |
236 |
Q |
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||||||||||||||||||| |
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| T |
34158499 |
attccaaacaatgcctatg |
34158481 |
T |
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