View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14810_low_2 (Length: 462)

Name: NF14810_low_2
Description: NF14810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14810_low_2
NF14810_low_2
[»] chr1 (24 HSPs)
chr1 (98-452)||(9354991-9355345)
chr1 (100-343)||(9330044-9330288)
chr1 (98-343)||(9250279-9250520)
chr1 (342-447)||(43514519-43514624)
chr1 (100-308)||(17717904-17718114)
chr1 (100-308)||(21128185-21128395)
chr1 (100-204)||(19163527-19163632)
chr1 (100-308)||(21209615-21209825)
chr1 (100-204)||(20871006-20871111)
chr1 (102-204)||(22651577-22651680)
chr1 (100-204)||(51649724-51649829)
chr1 (100-204)||(5643555-5643660)
chr1 (247-308)||(27519408-27519469)
chr1 (100-204)||(47611783-47611888)
chr1 (100-260)||(3178413-3178575)
chr1 (100-260)||(5840016-5840178)
chr1 (100-204)||(4174171-4174276)
chr1 (100-204)||(7514143-7514248)
chr1 (100-204)||(19184074-19184179)
chr1 (100-204)||(35641888-35641993)
chr1 (100-204)||(36240281-36240386)
chr1 (100-204)||(38101954-38102059)
chr1 (100-204)||(7693322-7693427)
chr1 (100-204)||(12737397-12737502)
[»] chr4 (32 HSPs)
chr4 (342-447)||(54185433-54185538)
chr4 (342-447)||(49285675-49285780)
chr4 (342-447)||(45864777-45864882)
chr4 (100-204)||(39529992-39530097)
chr4 (98-308)||(14009299-14009511)
chr4 (100-204)||(16312053-16312158)
chr4 (101-204)||(43250407-43250511)
chr4 (100-308)||(3378338-3378548)
chr4 (100-308)||(16850791-16851001)
chr4 (100-204)||(14839866-14839971)
chr4 (100-204)||(15200612-15200717)
chr4 (100-204)||(40460554-40460659)
chr4 (100-260)||(18756299-18756461)
chr4 (101-204)||(27818741-27818845)
chr4 (118-204)||(17243718-17243805)
chr4 (100-260)||(5019020-5019182)
chr4 (100-204)||(457503-457608)
chr4 (100-204)||(10297612-10297717)
chr4 (100-204)||(10744407-10744512)
chr4 (100-204)||(10958176-10958281)
chr4 (100-204)||(17925039-17925144)
chr4 (100-204)||(19948204-19948309)
chr4 (100-204)||(22003358-22003463)
chr4 (100-204)||(27663553-27663658)
chr4 (100-204)||(36025232-36025337)
chr4 (100-204)||(49514477-49514582)
chr4 (98-204)||(24647272-24647379)
chr4 (100-260)||(4991604-4991766)
chr4 (100-204)||(16262806-16262911)
chr4 (98-204)||(22127483-22127593)
chr4 (100-204)||(30930302-30930407)
chr4 (100-204)||(55749061-55749166)
[»] chr2 (28 HSPs)
chr2 (342-447)||(5847916-5848021)
chr2 (342-447)||(38806628-38806733)
chr2 (100-204)||(22778134-22778239)
chr2 (118-308)||(28705089-28705281)
chr2 (100-204)||(22745251-22745356)
chr2 (100-204)||(24418851-24418956)
chr2 (98-204)||(26873849-26873956)
chr2 (100-204)||(21165772-21165877)
chr2 (100-204)||(28725143-28725248)
chr2 (102-204)||(24805477-24805580)
chr2 (100-308)||(24722054-24722264)
chr2 (100-204)||(9901398-9901503)
chr2 (100-204)||(34794042-34794147)
chr2 (100-260)||(27228264-27228426)
chr2 (100-204)||(9766588-9766693)
chr2 (100-204)||(10273869-10273974)
chr2 (100-204)||(11398997-11399102)
chr2 (100-204)||(19306244-19306349)
chr2 (100-204)||(24331574-24331679)
chr2 (100-204)||(35259887-35259992)
chr2 (100-204)||(35270512-35270617)
chr2 (100-204)||(39173919-39174024)
chr2 (100-204)||(43352278-43352383)
chr2 (100-190)||(43089576-43089667)
chr2 (100-204)||(4216778-4216883)
chr2 (100-204)||(22937482-22937587)
chr2 (144-204)||(29251103-29251164)
chr2 (100-204)||(40247491-40247596)
[»] chr3 (53 HSPs)
chr3 (342-447)||(46636883-46636988)
chr3 (100-204)||(29937359-29937464)
chr3 (100-204)||(29986513-29986618)
chr3 (100-204)||(1060471-1060576)
chr3 (118-308)||(18125573-18125765)
chr3 (100-204)||(7798426-7798531)
chr3 (100-204)||(8999594-8999699)
chr3 (100-204)||(11209899-11210004)
chr3 (102-189)||(15840158-15840246)
chr3 (100-294)||(19639193-19639389)
chr3 (118-308)||(5208858-5209052)
chr3 (100-204)||(15654905-15655007)
chr3 (100-308)||(17248615-17248825)
chr3 (220-310)||(18702518-18702608)
chr3 (343-389)||(53585839-53585885)
chr3 (100-204)||(1787676-1787781)
chr3 (100-204)||(4430087-4430192)
chr3 (100-204)||(14311178-14311283)
chr3 (100-204)||(16394852-16394957)
chr3 (100-204)||(16438142-16438247)
chr3 (100-204)||(17014111-17014216)
chr3 (100-204)||(17899912-17900017)
chr3 (100-260)||(9985692-9985854)
chr3 (100-204)||(5583438-5583543)
chr3 (100-204)||(13128598-13128703)
chr3 (100-204)||(13146061-13146166)
chr3 (100-204)||(13265463-13265568)
chr3 (100-204)||(14472548-14472653)
chr3 (100-204)||(20677002-20677107)
chr3 (100-204)||(29465011-29465116)
chr3 (100-191)||(9384466-9384558)
chr3 (120-191)||(18003887-18003959)
chr3 (100-260)||(6494150-6494311)
chr3 (100-260)||(8781533-8781695)
chr3 (100-308)||(16027103-16027313)
chr3 (100-260)||(38201522-38201684)
chr3 (100-204)||(507975-508080)
chr3 (100-204)||(4750646-4750751)
chr3 (100-204)||(5869501-5869606)
chr3 (100-204)||(11276190-11276295)
chr3 (100-204)||(13376472-13376577)
chr3 (100-204)||(13387066-13387171)
chr3 (100-204)||(19785349-19785454)
chr3 (100-204)||(23764221-23764326)
chr3 (100-204)||(24387323-24387428)
chr3 (100-204)||(24666797-24666902)
chr3 (100-204)||(37873388-37873493)
chr3 (100-204)||(37881906-37882011)
chr3 (100-204)||(39379011-39379116)
chr3 (100-204)||(41690576-41690681)
chr3 (118-260)||(12241382-12241526)
chr3 (101-204)||(28318044-28318148)
chr3 (100-204)||(6213866-6213971)
[»] chr5 (46 HSPs)
chr5 (100-308)||(26776536-26776746)
chr5 (100-308)||(26759603-26759813)
chr5 (100-204)||(21669780-21669885)
chr5 (100-204)||(21202897-21203002)
chr5 (100-204)||(23485012-23485117)
chr5 (100-260)||(20783973-20784135)
chr5 (100-260)||(31443819-31443981)
chr5 (100-204)||(17453540-17453645)
chr5 (100-204)||(19467900-19468005)
chr5 (100-204)||(24943406-24943511)
chr5 (100-204)||(34055861-34055966)
chr5 (100-189)||(1118145-1118235)
chr5 (100-204)||(9339883-9339988)
chr5 (100-204)||(22680044-22680149)
chr5 (100-204)||(23399839-23399944)
chr5 (100-204)||(23700708-23700813)
chr5 (100-204)||(27049065-27049170)
chr5 (100-204)||(30234254-30234359)
chr5 (100-204)||(42046708-42046813)
chr5 (100-204)||(13530103-13530211)
chr5 (100-260)||(35219431-35219593)
chr5 (100-260)||(37736738-37736900)
chr5 (100-204)||(6979734-6979839)
chr5 (100-204)||(14033970-14034075)
chr5 (100-204)||(14453840-14453945)
chr5 (100-204)||(14564881-14564986)
chr5 (100-204)||(15743897-15744002)
chr5 (100-204)||(22150444-22150549)
chr5 (100-204)||(23300205-23300310)
chr5 (100-204)||(23365864-23365969)
chr5 (100-204)||(24571000-24571105)
chr5 (100-204)||(24823704-24823809)
chr5 (100-204)||(27464090-27464195)
chr5 (100-204)||(27619000-27619105)
chr5 (100-204)||(31837408-31837513)
chr5 (100-204)||(36589345-36589450)
chr5 (100-204)||(39356424-39356529)
chr5 (100-204)||(39497715-39497820)
chr5 (100-204)||(40394290-40394395)
chr5 (100-191)||(5297383-5297475)
chr5 (100-204)||(16000124-16000229)
chr5 (100-204)||(17610990-17611095)
chr5 (100-204)||(17722846-17722951)
chr5 (100-204)||(24811841-24811946)
chr5 (100-204)||(31352462-31352567)
chr5 (100-204)||(36691626-36691731)
[»] scaffold0758 (1 HSPs)
scaffold0758 (98-310)||(1219-1433)
[»] chr7 (33 HSPs)
chr7 (100-308)||(13121856-13122066)
chr7 (100-308)||(16313407-16313617)
chr7 (98-204)||(18435396-18435503)
chr7 (100-308)||(13663201-13663411)
chr7 (100-310)||(16403906-16404118)
chr7 (117-308)||(16552452-16552645)
chr7 (117-308)||(16613017-16613210)
chr7 (101-204)||(4415896-4416000)
chr7 (103-204)||(9166491-9166593)
chr7 (100-204)||(20997308-20997413)
chr7 (100-204)||(25205118-25205223)
chr7 (100-204)||(15881712-15881817)
chr7 (100-204)||(24741010-24741115)
chr7 (100-204)||(40045993-40046098)
chr7 (100-310)||(16155902-16156113)
chr7 (100-260)||(1994408-1994570)
chr7 (100-189)||(14142789-14142879)
chr7 (100-308)||(26657224-26657434)
chr7 (100-260)||(42872700-42872862)
chr7 (100-204)||(460875-460980)
chr7 (100-204)||(2709502-2709607)
chr7 (100-204)||(4218917-4219022)
chr7 (100-204)||(6871119-6871224)
chr7 (100-204)||(8005955-8006060)
chr7 (100-204)||(9440172-9440277)
chr7 (100-204)||(13876417-13876522)
chr7 (100-204)||(20986166-20986271)
chr7 (100-204)||(26393983-26394088)
chr7 (101-204)||(11012096-11012200)
chr7 (100-204)||(173799-173904)
chr7 (165-289)||(7418301-7418426)
chr7 (100-204)||(8624254-8624359)
chr7 (100-204)||(22096050-22096155)
[»] scaffold0624 (1 HSPs)
scaffold0624 (100-204)||(8652-8757)
[»] scaffold0382 (2 HSPs)
scaffold0382 (100-204)||(13514-13619)
scaffold0382 (100-204)||(5131-5236)
[»] chr8 (26 HSPs)
chr8 (100-204)||(3839850-3839955)
chr8 (100-204)||(22150587-22150691)
chr8 (98-204)||(21295158-21295265)
chr8 (100-202)||(23801618-23801721)
chr8 (100-308)||(22669845-22670055)
chr8 (100-204)||(19231706-19231811)
chr8 (100-204)||(19425253-19425358)
chr8 (98-204)||(248736-248843)
chr8 (98-204)||(811837-811944)
chr8 (100-308)||(16743495-16743705)
chr8 (100-189)||(20264423-20264513)
chr8 (100-189)||(21051052-21051142)
chr8 (100-204)||(30318545-30318650)
chr8 (100-204)||(32081536-32081641)
chr8 (100-186)||(17292461-17292548)
chr8 (100-189)||(22465034-22465124)
chr8 (100-260)||(36084792-36084954)
chr8 (100-204)||(3352475-3352580)
chr8 (100-204)||(9348026-9348131)
chr8 (100-204)||(13692410-13692515)
chr8 (100-204)||(15784550-15784655)
chr8 (100-204)||(29083319-29083424)
chr8 (118-204)||(36299854-36299941)
chr8 (100-204)||(6157994-6158099)
chr8 (100-204)||(19135608-19135713)
chr8 (100-204)||(19938232-19938337)
[»] chr6 (31 HSPs)
chr6 (100-308)||(25774359-25774569)
chr6 (100-204)||(25680815-25680920)
chr6 (100-308)||(22811631-22811841)
chr6 (100-204)||(17054391-17054496)
chr6 (100-204)||(18828125-18828230)
chr6 (100-310)||(14057200-14057412)
chr6 (102-204)||(17612401-17612504)
chr6 (100-308)||(19955727-19955937)
chr6 (100-310)||(14063329-14063541)
chr6 (100-204)||(20033740-20033845)
chr6 (119-308)||(16882912-16883103)
chr6 (100-308)||(27379567-27379777)
chr6 (100-308)||(27469950-27470160)
chr6 (100-260)||(27500528-27500690)
chr6 (100-204)||(21126318-21126423)
chr6 (102-204)||(22382898-22383001)
chr6 (100-204)||(3668325-3668430)
chr6 (100-204)||(13920127-13920232)
chr6 (100-204)||(27348626-27348731)
chr6 (100-204)||(27409366-27409471)
chr6 (100-204)||(34810978-34811083)
chr6 (100-203)||(19446213-19446317)
chr6 (100-191)||(26032314-26032406)
chr6 (100-191)||(26040489-26040581)
chr6 (118-204)||(12720669-12720756)
chr6 (100-204)||(4637807-4637912)
chr6 (100-204)||(9116307-9116412)
chr6 (100-204)||(12861812-12861917)
chr6 (100-204)||(32304861-32304966)
chr6 (100-204)||(32965761-32965866)
chr6 (118-260)||(26871626-26871770)
[»] scaffold0207 (1 HSPs)
scaffold0207 (100-260)||(27273-27435)
[»] scaffold0056 (1 HSPs)
scaffold0056 (100-308)||(29487-29697)
[»] scaffold0682 (1 HSPs)
scaffold0682 (100-204)||(5878-5983)
[»] scaffold0269 (1 HSPs)
scaffold0269 (100-204)||(23702-23807)
[»] scaffold0017 (1 HSPs)
scaffold0017 (100-204)||(46989-47094)
[»] scaffold0453 (1 HSPs)
scaffold0453 (98-308)||(4548-4760)
[»] scaffold0249 (1 HSPs)
scaffold0249 (98-308)||(8840-9052)
[»] scaffold0015 (1 HSPs)
scaffold0015 (98-308)||(160010-160222)
[»] scaffold0892 (1 HSPs)
scaffold0892 (100-204)||(4395-4500)
[»] scaffold0273 (1 HSPs)
scaffold0273 (100-310)||(21895-22107)
[»] scaffold0132 (1 HSPs)
scaffold0132 (102-204)||(16240-16343)
[»] scaffold0185 (1 HSPs)
scaffold0185 (100-204)||(22682-22787)
[»] scaffold0047 (2 HSPs)
scaffold0047 (100-204)||(36700-36805)
scaffold0047 (100-308)||(5123-5332)
[»] scaffold0863 (1 HSPs)
scaffold0863 (118-308)||(1326-1518)
[»] scaffold0022 (1 HSPs)
scaffold0022 (98-189)||(46789-46881)
[»] scaffold0211 (1 HSPs)
scaffold0211 (100-189)||(3528-3618)
[»] scaffold0080 (1 HSPs)
scaffold0080 (100-308)||(42625-42835)
[»] scaffold0315 (1 HSPs)
scaffold0315 (102-308)||(5167-5375)
[»] scaffold0387 (1 HSPs)
scaffold0387 (217-308)||(13892-13983)
[»] scaffold0004 (3 HSPs)
scaffold0004 (100-189)||(5009-5099)
scaffold0004 (100-189)||(5657-5747)
scaffold0004 (100-189)||(12166-12256)
[»] scaffold1732 (1 HSPs)
scaffold1732 (100-157)||(1266-1323)
[»] scaffold0738 (1 HSPs)
scaffold0738 (98-308)||(5701-5914)
[»] scaffold0217 (1 HSPs)
scaffold0217 (118-189)||(13480-13552)
[»] scaffold0193 (1 HSPs)
scaffold0193 (217-308)||(11606-11697)
[»] scaffold0035 (1 HSPs)
scaffold0035 (100-260)||(113487-113649)
[»] scaffold0827 (1 HSPs)
scaffold0827 (100-204)||(734-839)
[»] scaffold0084 (1 HSPs)
scaffold0084 (268-308)||(45346-45386)


Alignment Details
Target: chr1 (Bit Score: 327; Significance: 0; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 98 - 452
Target Start/End: Original strand, 9354991 - 9355345
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactcacaataaaatggagttgtagatagaaagaacaaacctt 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||     
T  9354991 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagcactcacaataaaatggggttgtagatagaaagaacaaaccta 9355090  T
Q  198 tacaagataggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9355091 tacaagataggcacacacgatgattcatgaaaacaatatggctaagcacttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 9355190  T
Q  298 atcagacctatatatattgatcaaaacaccatatgaactattcaaatatagccatcttaacatgtgttgtttgtccaaaactccacctcatccatcttct 397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9355191 atcagacctatatatattgatcaaaacaccatatgaactattcaaatatagccatcttaacatgtgttgtttgtccaaaactccacctcatccatcttct 9355290  T
Q  398 ttttcattgaatgcaatctggccaacttctgattttggattgaaatgcatattga 452  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  9355291 ttttcattgaatgcaacctggccaacttctgattttggattgaaatgcatcttga 9355345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 100 - 343
Target Start/End: Original strand, 9330044 - 9330288
Alignment:
Q  100 catttgaatcttttcgtaaaaaac-atggaattatccacgatttctcttgtcctagaactcacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9330044 catttgaaatttttcgtaaaaaaatatggaattatccacgatttctcttgtcctagaactcacaataaaatggagttgtagatagaaagaacaaacattt 9330143  T
Q  199 acaagataggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaata 298  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9330144 acaagataggcacacacgatgatttatgaaaacaatatggctaagcacttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaata 9330243  T
Q  299 tcagacctatatatattgatcaaaacaccatatgaactattcaaa 343  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  9330244 tcagacctatatgtattgatcaaaacatcatatgaactattcaaa 9330288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 98 - 343
Target Start/End: Complemental strand, 9250520 - 9250279
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactcacaataaaatggagttgtagatagaaagaacaaacctt 197  Q
    ||||||| |||||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||| | ||||||||||    
T  9250520 gtcatttaaatctttttgtacaaaacatggaattatccatgatttctgttgtcctagaactcacaataaaatggggttatagatagatataacaaacctt 9250421  T
Q  198 tacaagataggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||| |||||||| |||||||||| |||||||||||||||||| ||    
T  9250420 tacaagataggcacacaccatgattcatgaaaacaatatggctaagcacttttgggcaaaagctataaacacaacatgctatgatcaaaatataatctat 9250321  T
Q  298 atcagacctatatatattgatcaaaacaccatatgaactattcaaa 343  Q
    |||||| |    |||||||| |||||||||||||||||||||||||    
T  9250320 atcagaac----tatattgaacaaaacaccatatgaactattcaaa 9250279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 342 - 447
Target Start/End: Complemental strand, 43514624 - 43514519
Alignment:
Q  342 aatatagccatcttaacatgtgttgtttgtccaaaactccacctcatccatcttctttttcattgaatgcaatctggccaacttctgattttggattgaa 441  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43514624 aatatagacatcttaacatgtgttgtttgtccaaaactccacctcatccatcttctttttcattgaatgcaacctggccaacttctgattttggattgaa 43514525  T
Q  442 atgcat 447  Q
    ||||||    
T  43514524 atgcat 43514519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 17718114 - 17717904
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||| ||||| || ||||||||||| | ||||| || ||||||| ||||||||||| |||  ||||||| |||||||| |||||||| | | ||||    
T  17718114 catttgaaactttttgtgaaaaacatggagtcatccatgaattctcttctcctagaactccacagcaaaatggggttgtagaaagaaagaatagaacttt 17718015  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | ||||   || |||||||||||||| ||| ||| ||| || || |||||||||||  |  | |||||||||||||||||||||| |||| ||    
T  17718014 acaagaaatggcaggaaccatgattcatgaaaataatttggctaaacatttctgggcagaagcagtgaatacaacatgttatgatcaaaatagaatctat 17717915  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  17717914 atcagacctat 17717904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 100 - 308
Target Start/End: Original strand, 21128185 - 21128395
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || ||||||||||||||||||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||| | | ||||    
T  21128185 catttgaaattttttgtgaaaaacatggaattatccatgaattatcttctcctagaactccacaacaaaatggggttgtagagagaaagaatagaacttt 21128284  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || |||||||||||||||||| ||| ||| || || |||||||||||| |  | ||| ||||||||| ||| |||| |||| ||    
T  21128285 acaagaaatggctagaaccatgattcatgaaaacaatttggctaaacatttctgggcagaagctgtgaatacagcatgttatgttcagaatagaatctat 21128384  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  21128385 atcagacctat 21128395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 19163527 - 19163632
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  19163527 catttgaatctttttgtgaaaaacatggaattctccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaacataacttt 19163626  T
Q  199 acaaga 204  Q
    ||||||    
T  19163627 acaaga 19163632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 308
Target Start/End: Original strand, 21209615 - 21209825
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| |||||||  ||||||| |||||||| | | ||||    
T  21209615 catttgaacttttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggttttgtagagagaaagaatagaacttt 21209714  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    |  |||||||||||||||||| ||| ||| || |||||||||||||   |  | ||| ||||||||| ||| |||| |||| ||    
T  21209715 acaagaaatggctagaatcatgattcatgaaaacaatttggctaaacatttttgggcagaagtagtgaatacagcatgttatgttcagaatagaatctat 21209814  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  21209815 atcagacctat 21209825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 20871006 - 20871111
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||||||||||||||||| || ||||||| |||||||||| ||||| ||||||| ||||| |  |||||||||| | ||||    
T  20871006 catttgaatctttttgtgaaaaacatggaattatccatgaattctcttctcctagaactccacaacaaaatggggttgttgtgagaaagaacataacttt 20871105  T
Q  199 acaaga 204  Q
     |||||    
T  20871106 tcaaga 20871111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 22651680 - 22651577
Alignment:
Q  102 tttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttac 200  Q
    |||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||  ||||||| |||||||| |||||||||| | || |||    
T  22651680 tttgaatctttttgtgaaaaacatggaattgtccatgaattctcttttcctagaactccacagcaaaatggggttgtagagagaaagaacagaactctac 22651581  T
Q  201 aaga 204  Q
    ||||    
T  22651580 aaga 22651577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 51649724 - 51649829
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||| |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||||    
T  51649724 catttgaatttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacttt 51649823  T
Q  199 acaaga 204  Q
    ||||||    
T  51649824 acaaga 51649829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 5643555 - 5643660
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| ||||||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  5643555 catttgaacttttttgtaaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 5643654  T
Q  199 acaaga 204  Q
    ||||||    
T  5643655 acaaga 5643660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 27519408 - 27519469
Alignment:
Q  247 ttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaatatcagacctat 308  Q
    ||||||||||||||| || ||||||||||||||| |||||| |||||| | |||||||||||    
T  27519408 ttttgggcagaagctgtaaacacaacatgttatgttcaaaacataatctacatcagacctat 27519469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 47611783 - 47611888
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||||    
T  47611783 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacttt 47611882  T
Q  199 acaaga 204  Q
    ||||||    
T  47611883 acaaga 47611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 3178575 - 3178413
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  3178575 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 3178476  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  3178475 acaagaaatggccagaaccatgatccatgaaaacaatttagctaaacatttttgggcagaagc 3178413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 5840178 - 5840016
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  5840178 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 5840079  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  5840078 acaagaaatggccagaaccatgatccatgaaaacaatttagctaaacatttttgggcagaagc 5840016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 4174276 - 4174171
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  4174276 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 4174177  T
Q  199 acaaga 204  Q
    ||||||    
T  4174176 acaaga 4174171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 7514248 - 7514143
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  7514248 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacataacctt 7514149  T
Q  199 acaaga 204  Q
    ||||||    
T  7514148 acaaga 7514143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 19184179 - 19184074
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  19184179 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 19184080  T
Q  199 acaaga 204  Q
    ||||||    
T  19184079 acaaga 19184074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 35641888 - 35641993
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  35641888 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 35641987  T
Q  199 acaaga 204  Q
    ||||||    
T  35641988 acaaga 35641993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 36240281 - 36240386
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  36240281 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 36240380  T
Q  199 acaaga 204  Q
    ||||||    
T  36240381 acaaga 36240386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 38102059 - 38101954
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  38102059 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 38101960  T
Q  199 acaaga 204  Q
    ||||||    
T  38101959 acaaga 38101954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 7693322 - 7693427
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||  |||| || || |||| |||||||||| ||||| ||||||  |||||||| ||||| |||| | | ||    
T  7693322 catttgaatctttttgtgaaaaacatgggatactccatgaattttcttctcctagaactccacaacaaaatgaggttgtagagagaaaaaacagaacctt 7693421  T
Q  199 acaaga 204  Q
    ||||||    
T  7693422 acaaga 7693427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 12737502 - 12737397
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || ||||| |||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  12737502 catttgaacttttttgtgaaaaatatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 12737403  T
Q  199 acaaga 204  Q
    ||||||    
T  12737402 acaaga 12737397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 342 - 447
Target Start/End: Original strand, 54185433 - 54185538
Alignment:
Q  342 aatatagccatcttaacatgtgttgtttgtccaaaactccacctcatccatcttctttttcattgaatgcaatctggccaacttctgattttggattgaa 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  54185433 aatatagccatcttaacatgtgttgtttgtccaaaactccacctcatccatcttctttttcattgaatgcaatctggtcaacttctgattttggattgaa 54185532  T
Q  442 atgcat 447  Q
    ||||||    
T  54185533 atgcat 54185538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 342 - 447
Target Start/End: Complemental strand, 49285780 - 49285675
Alignment:
Q  342 aatatagccatcttaacatgtgttgtttgtccaaaactccacctcatccatcttctttttcattgaatgcaatctggccaacttctgattttggattgaa 441  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  49285780 aatatagccatcttaacatgtgttgtttgtccaaaactccacctcatccatcttctttttcattgaatgcaaccttgccaacttctgattttggattgaa 49285681  T
Q  442 atgcat 447  Q
    ||||||    
T  49285680 atgcat 49285675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 342 - 447
Target Start/End: Original strand, 45864777 - 45864882
Alignment:
Q  342 aatatagccatcttaacatgtgttgtttgtccaaaactccacctcatccatcttctttttcattgaatgcaatctggccaacttctgattttggattgaa 441  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45864777 aatatagctatcttaacatgtgttgtttgtccaaaactccatctcatccatcttctttttcattgaatgcaacctggccaacttctgattttggattgaa 45864876  T
Q  442 atgcat 447  Q
    ||||||    
T  45864877 atgcat 45864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 39529992 - 39530097
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  39529992 catttgaatctttttgtgaaaaacatgggattctccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 39530091  T
Q  199 acaaga 204  Q
    ||||||    
T  39530092 acaaga 39530097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 98 - 308
Target Start/End: Complemental strand, 14009511 - 14009299
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacct 196  Q
    |||||||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||  |||||||| ||||||| |||||||| | | ||    
T  14009511 gtcatttgaatctttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacagaaaaatggatttgtagaaagaaagaatagaact 14009412  T
Q  197 ttacaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatca 295  Q
    |||||||| | | |    || |||||||||||||| ||||||| ||  || || ||||||||| |  |  | ||| |||||||||  ||||||| ||||     
T  14009411 ttacaagaaatgactagaaccatgattcatgaaaataatatggctatacatttctgggcagaaacagtgaatacatcatgttatgtccaaaatagaatct 14009312  T
Q  296 atatcagacctat 308  Q
    |||||||||||||    
T  14009311 atatcagacctat 14009299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 16312158 - 16312053
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  16312158 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaaaaaaatggggttgtagagagaaagaacagaacttt 16312059  T
Q  199 acaaga 204  Q
    ||||||    
T  16312058 acaaga 16312053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 43250511 - 43250407
Alignment:
Q  101 atttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttta 199  Q
    ||||||||||||| || ||||| |||||||||| || || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||| | | |||||    
T  43250511 atttgaatctttttgtgaaaaatatggaattattcatgaattctcttctcctagaactccacaacaaaatggggttgtagaaagaaagaatagaacttta 43250412  T
Q  200 caaga 204  Q
    |||||    
T  43250411 caaga 43250407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 3378548 - 3378338
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||| ||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  3378548 catttgaatccttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 3378449  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || || |||||||||||  |  | ||  ||||||||  ||||||||| ||| ||    
T  3378448 acaagaaatggccagaaccatgatccatgaaaacaatctagctaaacatttctgggcagaagcagttaatacttcatgttatattcaaaatatgatctat 3378349  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  3378348 atcagacctat 3378338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 16851001 - 16850791
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||| | |||||||| | |||||| | | ||||    
T  16851001 catttgaacttttttgtgaaaaacatggaattctccatgaattctcttctcctagaactccacaacaaaatagggttgtagagataaagaatagatcttt 16850902  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || |||||||||||||||||| ||| ||| || || |||||||||||  |  | |||| ||||||||  ||||||| |||  ||    
T  16850901 acaagaaatggctagaaccatgattcatgaaaacaatttggctaaacaattctgggcagaagcagtgaatacaagatgttatgtccaaaatagaatttat 16850802  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  16850801 atcagacctat 16850791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 14839866 - 14839971
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  14839866 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 14839965  T
Q  199 acaaga 204  Q
    ||||||    
T  14839966 acaaga 14839971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 15200612 - 15200717
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| ||||| |||| | ||||    
T  15200612 catttgaatctttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaaaaacagaacttt 15200711  T
Q  199 acaaga 204  Q
    ||||||    
T  15200712 acaaga 15200717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 40460554 - 40460659
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  40460554 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 40460653  T
Q  199 acaaga 204  Q
    ||||||    
T  40460654 acaaga 40460659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 18756299 - 18756461
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| ||||||||||| |||| |||||||||||||||| |||||||||| | | ||    
T  18756299 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacctt 18756398  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  18756399 acaagaaatggccagaaccatgatccatgaaaacaatctagctaaacatttttgggcagaagc 18756461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 27818741 - 27818845
Alignment:
Q  101 atttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttta 199  Q
    |||||||  |||| || |||||||||| ||| |||| || || |||| ||||||||||| |||| |||||||||||||||| |||||||||| | | |||    
T  27818741 atttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacctta 27818840  T
Q  200 caaga 204  Q
    |||||    
T  27818841 caaga 27818845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 17243805 - 17243718
Alignment:
Q  118 aaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttacaaga 204  Q
    ||||||||| |||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||| | | ||||||||||    
T  17243805 aaaaacatgaaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaatagaactttacaaga 17243718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 5019182 - 5019020
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  5019182 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 5019083  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  5019082 acaagaaatggccagaaccatgatccatgaaaacaatctagctaaacatttttgggcagaagc 5019020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 457608 - 457503
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  457608 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 457509  T
Q  199 acaaga 204  Q
    ||||||    
T  457508 acaaga 457503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 10297717 - 10297612
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  10297717 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 10297618  T
Q  199 acaaga 204  Q
    ||||||    
T  10297617 acaaga 10297612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 10744407 - 10744512
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  10744407 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 10744506  T
Q  199 acaaga 204  Q
    ||||||    
T  10744507 acaaga 10744512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 10958176 - 10958281
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  10958176 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 10958275  T
Q  199 acaaga 204  Q
    ||||||    
T  10958276 acaaga 10958281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 17925144 - 17925039
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  17925144 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 17925045  T
Q  199 acaaga 204  Q
    ||||||    
T  17925044 acaaga 17925039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 19948204 - 19948309
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  19948204 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 19948303  T
Q  199 acaaga 204  Q
    ||||||    
T  19948304 acaaga 19948309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 22003463 - 22003358
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  22003463 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 22003364  T
Q  199 acaaga 204  Q
    ||||||    
T  22003363 acaaga 22003358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 27663658 - 27663553
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  27663658 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 27663559  T
Q  199 acaaga 204  Q
    ||||||    
T  27663558 acaaga 27663553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 36025337 - 36025232
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  36025337 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 36025238  T
Q  199 acaaga 204  Q
    ||||||    
T  36025237 acaaga 36025232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 49514582 - 49514477
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  49514582 catttgaagttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 49514483  T
Q  199 acaaga 204  Q
    ||||||    
T  49514482 acaaga 49514477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 24647379 - 24647272
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacct 196  Q
    ||||||||||  |||| || ||||| |||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | |     
T  24647379 gtcatttgaacttttttgtgaaaaatatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacc 24647280  T
Q  197 ttacaaga 204  Q
    ||||||||    
T  24647279 ttacaaga 24647272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 4991604 - 4991766
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||| ||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  4991604 catttgaacttttttgtgaaaaacgtgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 4991703  T
Q  199 acaagataggcaca-cacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |  ||  || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  4991704 acaagaaatgaccagaaccatgatccatgaaaacaatctaggtaaacatttttgggcagaagc 4991766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 16262911 - 16262806
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| | |||||||| | | ||    
T  16262911 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaacaaagaacagaacctt 16262812  T
Q  199 acaaga 204  Q
    ||||||    
T  16262811 acaaga 16262806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 22127593 - 22127483
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact----cacaataaaatggagttgtagatagaaagaacaaa 193  Q
    ||||||||||  |||| ||  |||||||||||||  ||| ||||||  |||||||||||||    ||||| |||||||| |||||||  ||||||||| |    
T  22127593 gtcatttgaaattttttgtgtaaaacatggaattcaccatgatttcatttgtcctagaactgatccacaacaaaatggaattgtagaacgaaagaacaga 22127494  T
Q  194 cctttacaaga 204  Q
     ||||||||||    
T  22127493 tctttacaaga 22127483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 30930302 - 30930407
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||| | |||||||||| | | ||    
T  30930302 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtatagagaaagaacagaacctt 30930401  T
Q  199 acaaga 204  Q
    ||||||    
T  30930402 acaaga 30930407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 55749061 - 55749166
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||| ||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  55749061 catttgaacttttttgtgaaaaacttgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 55749160  T
Q  199 acaaga 204  Q
    ||||||    
T  55749161 acaaga 55749166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 342 - 447
Target Start/End: Original strand, 5847916 - 5848021
Alignment:
Q  342 aatatagccatcttaacatgtgttgtttgtccaaaactccacctcatccatcttctttttcattgaatgcaatctggccaacttctgattttggattgaa 441  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5847916 aatatagccatcttaacgtgtgttgtttgtccaaaactccccctcatccatcttctttttcattgaatgcaacctggccaacttctgattttggattgaa 5848015  T
Q  442 atgcat 447  Q
    ||||||    
T  5848016 atgcat 5848021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 342 - 447
Target Start/End: Original strand, 38806628 - 38806733
Alignment:
Q  342 aatatagccatcttaacatgtgttgtttgtccaaaactccacctcatccatcttctttttcattgaatgcaatctggccaacttctgattttggattgaa 441  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  38806628 aatatagccatctttacatgtgttgtttgtccaaaactccacctcatccatcttctttttcattgaatgcaacttggccaacttttgattttggattgaa 38806727  T
Q  442 atgcat 447  Q
    ||||||    
T  38806728 atgcat 38806733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 22778239 - 22778134
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  22778239 catttgaatctttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacttt 22778140  T
Q  199 acaaga 204  Q
    ||||||    
T  22778139 acaaga 22778134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 118 - 308
Target Start/End: Original strand, 28705089 - 28705281
Alignment:
Q  118 aaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttacaagata-ggcacacac 215  Q
    |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||| | | |||||||||| | |||    ||    
T  28705089 aaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaatagaactttacaagaaatggctagaac 28705188  T
Q  216 gatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaatatcagacctat 308  Q
     |||||| ||||||||||| ||||||| || || |||||||||||  |  | |||||||||||||  ||||||| |||| |||||| ||||||    
T  28705189 catgatttatgaaaacaatttggttaaacatttctgggcagaagcagtgaatacaacatgttatgtccaaaatagaatctatatcatacctat 28705281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 22745251 - 22745356
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||||||||||||||||| || |||||||  ||||||||| ||||| ||||||  |||||||| |||||||||| | ||||    
T  22745251 catttgaatctttttgtgaaaaacatggaattatccatgaattctcttcccctagaactccacaacaaaatgcggttgtagaaagaaagaacagaacttt 22745350  T
Q  199 acaaga 204  Q
    ||||||    
T  22745351 acaaga 22745356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 24418851 - 24418956
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  24418851 catttgaatctttttgtgaaaaacatggaattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 24418950  T
Q  199 acaaga 204  Q
    ||||||    
T  24418951 acaaga 24418956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 26873956 - 26873849
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacct 196  Q
    |||||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||    
T  26873956 gtcatttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaact 26873857  T
Q  197 ttacaaga 204  Q
    ||| ||||    
T  26873856 ttataaga 26873849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 21165772 - 21165877
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  21165772 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 21165871  T
Q  199 acaaga 204  Q
    ||||||    
T  21165872 acaaga 21165877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 28725143 - 28725248
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  28725143 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 28725242  T
Q  199 acaaga 204  Q
    ||||||    
T  28725243 acaaga 28725248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 24805477 - 24805580
Alignment:
Q  102 tttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttac 200  Q
    |||||||||| | || |||||||||||||| |||| || ||||||| |||||||||| ||||  ||||||| |||||||| |||||||||| | || |||    
T  24805477 tttgaatcttcttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacagcaaaatggggttgtagagagaaagaacagaactctac 24805576  T
Q  201 aaga 204  Q
    ||||    
T  24805577 aaga 24805580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 24722264 - 24722054
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| |||||||| || ||||||| || |||||||| |||  ||||| | |||||||| |||||||| | | ||||    
T  24722264 catttgaaaatttttgtgaaaaacatgggattatccaggaattctcttctcatagaactccacagcaaaatagggttgtagagagaaagaatagaacttt 24722165  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | ||||   || |||||||||||||| ||| ||| ||| || || |||||||||||  |  | | |||||||||||  ||||||| |||| |     
T  24722164 acaagaaatggcaagaaccatgattcatgaaaataatttggctaaacatttctgggcagaagcagtgaatataacatgttatgtccaaaatagaatctaa 24722065  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  24722064 atcagacctat 24722054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 9901398 - 9901503
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| ||||||||||| |||| ||||||| |||||||| |||||||||||| | ||    
T  9901398 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacaaaacctt 9901497  T
Q  199 acaaga 204  Q
    ||||||    
T  9901498 acaaga 9901503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 34794042 - 34794147
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||| |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  34794042 catttgaatttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 34794141  T
Q  199 acaaga 204  Q
    ||||||    
T  34794142 acaaga 34794147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 27228426 - 27228264
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  27228426 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 27228327  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  27228326 acaagaaatggccagaaccatgatccatgaaaacaatttagctaaacatttttgggcagaagc 27228264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 9766588 - 9766693
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  9766588 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 9766687  T
Q  199 acaaga 204  Q
    ||||||    
T  9766688 acaaga 9766693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 10273974 - 10273869
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  10273974 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 10273875  T
Q  199 acaaga 204  Q
    ||||||    
T  10273874 acaaga 10273869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 11398997 - 11399102
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  11398997 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 11399096  T
Q  199 acaaga 204  Q
    ||||||    
T  11399097 acaaga 11399102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 19306244 - 19306349
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  19306244 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 19306343  T
Q  199 acaaga 204  Q
    ||||||    
T  19306344 acaaga 19306349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 24331574 - 24331679
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  24331574 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 24331673  T
Q  199 acaaga 204  Q
    ||||||    
T  24331674 acaaga 24331679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 35259992 - 35259887
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  35259992 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 35259893  T
Q  199 acaaga 204  Q
    ||||||    
T  35259892 acaaga 35259887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 35270617 - 35270512
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  35270617 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 35270518  T
Q  199 acaaga 204  Q
    ||||||    
T  35270517 acaaga 35270512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 39173919 - 39174024
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  39173919 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 39174018  T
Q  199 acaaga 204  Q
    ||||||    
T  39174019 acaaga 39174024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 43352383 - 43352278
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  43352383 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 43352284  T
Q  199 acaaga 204  Q
    ||||||    
T  43352283 acaaga 43352278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 43089667 - 43089576
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaac 190  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||    
T  43089667 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaac 43089576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 4216883 - 4216778
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  4216883 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacatt 4216784  T
Q  199 acaaga 204  Q
    ||||||    
T  4216783 acaaga 4216778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 22937482 - 22937587
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  22937482 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacatt 22937581  T
Q  199 acaaga 204  Q
    ||||||    
T  22937582 acaaga 22937587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 29251164 - 29251103
Alignment:
Q  144 tcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaacctttacaaga 204  Q
    |||| ||||||||||| |||| ||||||| |||||||| |||||||||||| | ||||||||    
T  29251164 tcttctcctagaactccacaacaaaatggggttgtagagagaaagaacaaaaccttacaaga 29251103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 40247596 - 40247491
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  40247596 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacatt 40247497  T
Q  199 acaaga 204  Q
    ||||||    
T  40247496 acaaga 40247491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 3e-43; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 342 - 447
Target Start/End: Original strand, 46636883 - 46636988
Alignment:
Q  342 aatatagccatcttaacatgtgttgtttgtccaaaactccacctcatccatcttctttttcattgaatgcaatctggccaacttctgattttggattgaa 441  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  46636883 aatatagccatcttaacatgtgttgtttgcccaaaactccacctcatccatcttcttattcgttgaatgcaacctggccaacttctgattttggattgaa 46636982  T
Q  442 atgcat 447  Q
    ||||||    
T  46636983 atgcat 46636988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 29937359 - 29937464
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  29937359 catttgaatctttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacttt 29937458  T
Q  199 acaaga 204  Q
    ||||||    
T  29937459 acaaga 29937464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 29986513 - 29986618
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  29986513 catttgaatctttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacttt 29986612  T
Q  199 acaaga 204  Q
    ||||||    
T  29986613 acaaga 29986618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 1060576 - 1060471
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  1060576 catttgaatctttttgtgaaaaacatgggattctccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 1060477  T
Q  199 acaaga 204  Q
    ||||||    
T  1060476 acaaga 1060471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 118 - 308
Target Start/End: Original strand, 18125573 - 18125765
Alignment:
Q  118 aaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttacaagata-ggcacacac 215  Q
    |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| ||| ||||||||||||| | | |||||||||| | |||    ||    
T  18125573 aaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttatagatagaaagaatagaactttacaagaaatggctagaac 18125672  T
Q  216 gatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaatatcagacctat 308  Q
     |||||||||||||||||| ||  ||| || || |||||||||||  |  | |||||||||||||  ||||||| |||  |||||||||||||    
T  18125673 catgattcatgaaaacaatttgactaaacatttctgggcagaagcagtgaatacaacatgttatgtccaaaatagaatttatatcagacctat 18125765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 7798426 - 7798531
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  7798426 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 7798525  T
Q  199 acaaga 204  Q
    ||||||    
T  7798526 acaaga 7798531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 8999594 - 8999699
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || ||||||| |||||||||| || || ||||||| |||||||| |||||||||| | ||||    
T  8999594 catttgaatctttttgtgaaaaacatgggattctccatgaattctcttctcctagaactccataaaaaaatggggttgtagagagaaagaacagaacttt 8999693  T
Q  199 acaaga 204  Q
    ||||||    
T  8999694 acaaga 8999699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 11209899 - 11210004
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  11209899 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 11209998  T
Q  199 acaaga 204  Q
    ||||||    
T  11209999 acaaga 11210004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 15840246 - 15840158
Alignment:
Q  102 tttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaa 189  Q
    |||||||||||| || ||||||||||||||||||| || ||||||| |||||||||| ||||  ||||||| |||||||| ||||||||    
T  15840246 tttgaatctttttgtgaaaaacatggaattatccatgaattctcttctcctagaactccacagcaaaatggggttgtagagagaaagaa 15840158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 294
Target Start/End: Original strand, 19639193 - 19639389
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||||||||  | ||||||||||||||||||| || || |||| |||| ||||| ||||| ||||||| |||||||| ||||||||||   ||||    
T  19639193 catttgaatctttttatgaaaaacatggaattatccatgagttatcttctcctggaactccacaacaaaatggggttgtagagagaaagaacatgtcttt 19639292  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatc 294  Q
    |||||| | |||    || ||||| |||||||| ||| ||| |||| | || |||||||||||  || || || ||||||||| |||||||| ||||    
T  19639293 acaagaaatggctataaccatgatacatgaaaataatttggctaagtacttctgggcagaagcagtaaacgcagcatgttatgttcaaaatagaatc 19639389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 118 - 308
Target Start/End: Complemental strand, 5209052 - 5208858
Alignment:
Q  118 aaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggag--ttgtagatagaaagaacaaacctttacaagata-ggcacac 213  Q
    ||||||||||||||||||| || ||||||| || |||||||| |||| ||||||| |  ||||||| |||||||| | | |||||||||| | |||        
T  5209052 aaaaacatggaattatccatgaattctcttctcatagaactccacaacaaaatggggggttgtagagagaaagaatagaactttacaagaaatggctaga 5208953  T
Q  214 acgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaatatcagacctat 308  Q
    || |||||||||||||||||| ||| ||| || || |||||||||||  |  | ||| |||||||||  ||||||| |||| |||||||||||||    
T  5208952 accatgattcatgaaaacaatttggctaaacatttatgggcagaagcagtgaatacagcatgttatgtccaaaatagaatctatatcagacctat 5208858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 15654905 - 15655007
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || |||||||   |||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  15654905 catttgaatctttttgtgaaaaacatggaattgtccatgaattctctt---ctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 15655001  T
Q  199 acaaga 204  Q
    ||||||    
T  15655002 acaaga 15655007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 308
Target Start/End: Original strand, 17248615 - 17248825
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || | |||||||||||| |||| || ||||||| |||||||||| ||||||||||||| |||||| | |||||| | | | ||||    
T  17248615 catttgaatctttttgtgagaaacatggaattgtccatgaattctcttctcctagaactccacaataaaatggggttgtaaagagaaaggatagaacttt 17248714  T
Q  199 acaagataggcaca-cacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | ||  |  || |||||||||||||| ||| ||| ||| || || |||| |||||   |  | ||||||| |||||  ||||||| |||| ||    
T  17248715 acaagaaatgcctagaaccatgattcatgaaaataatttggctaaacatttctgggtagaagtagtgaatacaacatattatgtccaaaatagaatctat 17248814  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  17248815 atcagacctat 17248825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 310
Target Start/End: Original strand, 18702518 - 18702608
Alignment:
Q  220 attcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaatatcagacctatat 310  Q
    ||||||||||||||| ||| |||  | || |||||||||||| || ||||||||||||||| |||||||| |||| |||| ||||||||||    
T  18702518 attcatgaaaacaatttggctaaatatttatgggcagaagctgtaaacacaacatgttatgttcaaaatagaatctatattagacctatat 18702608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 389
Target Start/End: Original strand, 53585839 - 53585885
Alignment:
Q  343 atatagccatcttaacatgtgttgtttgtccaaaactccacctcatc 389  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  53585839 atatagccatcttaacatatgttgtttgtccaaaactccacctcatc 53585885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 1787676 - 1787781
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  1787676 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 1787775  T
Q  199 acaaga 204  Q
    ||||||    
T  1787776 acaaga 1787781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 4430192 - 4430087
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||| ||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  4430192 catttggatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 4430093  T
Q  199 acaaga 204  Q
    ||||||    
T  4430092 acaaga 4430087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 14311178 - 14311283
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || | || |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  14311178 catttgaatctttttgtgaaaaacatgggattctccatgaatttttttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 14311277  T
Q  199 acaaga 204  Q
    ||||||    
T  14311278 acaaga 14311283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 16394852 - 16394957
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| ||||||||||| |||| |||||||||||||||| |||||||||| | ||||    
T  16394852 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacttt 16394951  T
Q  199 acaaga 204  Q
    ||||||    
T  16394952 acaaga 16394957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 16438142 - 16438247
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  16438142 catttgaatctttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 16438241  T
Q  199 acaaga 204  Q
    ||||||    
T  16438242 acaaga 16438247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 17014216 - 17014111
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||| |||||||| |||| || ||||||| ||||| |||| ||||| ||||||| |||||||| |||||||||  | ||||    
T  17014216 catttgaatctttttgtgaaaaatatggaattgtccatgaattctcttctcctataactccacaacaaaatggggttgtagagagaaagaacggaacttt 17014117  T
Q  199 acaaga 204  Q
    ||||||    
T  17014116 acaaga 17014111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 17899912 - 17900017
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| | ||| ||||||| |||||||| |||||||||| | ||||    
T  17899912 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccgcaacaaaatggggttgtagagagaaagaacagaacttt 17900011  T
Q  199 acaaga 204  Q
    ||||||    
T  17900012 acaaga 17900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 9985692 - 9985854
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  9985692 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 9985791  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | ||||| || ||||||||||||||    
T  9985792 acaagaaatggccagaaccatgatccatgaaaacaatctagttaaacatttttgggcagaagc 9985854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 5583438 - 5583543
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||||    
T  5583438 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacttt 5583537  T
Q  199 acaaga 204  Q
    ||||||    
T  5583538 acaaga 5583543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 13128703 - 13128598
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||||    
T  13128703 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacttt 13128604  T
Q  199 acaaga 204  Q
    ||||||    
T  13128603 acaaga 13128598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 13146166 - 13146061
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || ||||||| | |||||||| ||||  ||||||  |||||||| |||||||||| | || |    
T  13146166 catttgaatctttttgtgaaaaacatggaattgtccatgaattctcttcttctagaactccacagcaaaatgaggttgtagagagaaagaacataactct 13146067  T
Q  199 acaaga 204  Q
    ||||||    
T  13146066 acaaga 13146061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 13265463 - 13265568
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| || ||||||| || || ||||||| |||||||| |||||||||| | ||||    
T  13265463 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcatagaactccataacaaaatggggttgtagagagaaagaacagaacttt 13265562  T
Q  199 acaaga 204  Q
    ||||||    
T  13265563 acaaga 13265568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 14472653 - 14472548
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||||    
T  14472653 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacttt 14472554  T
Q  199 acaaga 204  Q
    ||||||    
T  14472553 acaaga 14472548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 20677002 - 20677107
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||||||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  20677002 catttgaacttttttgtgaaaaacatggaattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 20677101  T
Q  199 acaaga 204  Q
    ||||||    
T  20677102 acaaga 20677107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 29465011 - 29465116
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||| |||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  29465011 catttgaatctttttgtgaaaaatatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 29465110  T
Q  199 acaaga 204  Q
    ||||||    
T  29465111 acaaga 29465116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 9384466 - 9384558
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaaca 191  Q
    |||||||||||||| || ||||| |||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| ||||||||||    
T  9384466 catttgaatctttttgtgaaaaatatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaaca 9384558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 18003959 - 18003887
Alignment:
Q  120 aaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaaca 191  Q
    |||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| ||||||||||    
T  18003959 aaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaaca 18003887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 6494150 - 6494311
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||||||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  6494150 catttgaacttttttgtgaaaaacatggaattctccatgaattttcttctcctagaactccacaacaaaatgg-gttgtagagagaaagaacagaacctt 6494248  T
Q  199 acaag-ataggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    ||||| | ||||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  6494249 acaagaaaaggccagaaccatgatccatgaaaacaatctagctaaacatttttgggcagaagc 6494311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 8781695 - 8781533
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  8781695 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 8781596  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  8781595 acaagaaatggccagaaccatgatccatgaaaacaatttagctaaacatttttgggcagaagc 8781533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 16027313 - 16027103
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||| ||||| || |||||||||||||| ||||  | |||| || |||||||||| ||||  ||||||| |||||||| ||||| || ||| ||||    
T  16027313 catttgaaactttttgtgaaaaacatggaattgtccattaattctgttctcctagaactccacagcaaaatggggttgtagaaagaaaaaataaaacttt 16027214  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    ||| || | ||||   || ||||||| |||||| ||| ||| ||| || || |  |||| ||| ||  | |||||||||||||  ||||||| |||| ||    
T  16027213 acaggaaatggcaagaaccatgattcctgaaaaaaatttggctaaacatttctaagcaggagcaatgaatacaacatgttatgtccaaaatagaatctat 16027114  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  16027113 atcagacctat 16027103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 38201684 - 38201522
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  38201684 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 38201585  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  38201584 acaagaaatggccagaaccatgatccatgaaaacaatttagctaaacatttttgggcagaagc 38201522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 507975 - 508080
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  507975 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 508074  T
Q  199 acaaga 204  Q
    ||||||    
T  508075 acaaga 508080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 4750751 - 4750646
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  4750751 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 4750652  T
Q  199 acaaga 204  Q
    ||||||    
T  4750651 acaaga 4750646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 5869501 - 5869606
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  5869501 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 5869600  T
Q  199 acaaga 204  Q
    ||||||    
T  5869601 acaaga 5869606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 11276190 - 11276295
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  11276190 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 11276289  T
Q  199 acaaga 204  Q
    ||||||    
T  11276290 acaaga 11276295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 13376472 - 13376577
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  13376472 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 13376571  T
Q  199 acaaga 204  Q
    ||||||    
T  13376572 acaaga 13376577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 13387066 - 13387171
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  13387066 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 13387165  T
Q  199 acaaga 204  Q
    ||||||    
T  13387166 acaaga 13387171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 19785454 - 19785349
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  19785454 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 19785355  T
Q  199 acaaga 204  Q
    ||||||    
T  19785354 acaaga 19785349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 23764326 - 23764221
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  23764326 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 23764227  T
Q  199 acaaga 204  Q
    ||||||    
T  23764226 acaaga 23764221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 24387323 - 24387428
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  24387323 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 24387422  T
Q  199 acaaga 204  Q
    ||||||    
T  24387423 acaaga 24387428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 24666902 - 24666797
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  24666902 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 24666803  T
Q  199 acaaga 204  Q
    ||||||    
T  24666802 acaaga 24666797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 37873493 - 37873388
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  37873493 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 37873394  T
Q  199 acaaga 204  Q
    ||||||    
T  37873393 acaaga 37873388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 37882011 - 37881906
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  37882011 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 37881912  T
Q  199 acaaga 204  Q
    ||||||    
T  37881911 acaaga 37881906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 39379116 - 39379011
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| ||||| |||| | ||||    
T  39379116 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaaaaacagaacttt 39379017  T
Q  199 acaaga 204  Q
    ||||||    
T  39379016 acaaga 39379011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 41690681 - 41690576
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  41690681 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 41690582  T
Q  199 acaaga 204  Q
    ||||||    
T  41690581 acaaga 41690576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 12241382 - 12241526
Alignment:
Q  118 aaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttacaagata-ggcacacac 215  Q
    |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | |||||||| | |||    ||    
T  12241382 aaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaaccttacaagaaatggccagaac 12241481  T
Q  216 gatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
     ||||| |||||||||||| | | ||| || ||||||||||||||    
T  12241482 catgatccatgaaaacaatctagctaaacatttttgggcagaagc 12241526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 28318044 - 28318148
Alignment:
Q  101 atttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttta 199  Q
    |||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | |||    
T  28318044 atttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctta 28318143  T
Q  200 caaga 204  Q
    |||||    
T  28318144 caaga 28318148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 6213866 - 6213971
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||  |||||||| |||||||||| | | ||    
T  6213866 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatgaggttgtagagagaaagaacagaacctt 6213965  T
Q  199 acaaga 204  Q
    ||||||    
T  6213966 acaaga 6213971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 6e-32; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 100 - 308
Target Start/End: Original strand, 26776536 - 26776746
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||| | | ||||    
T  26776536 catttgaatctttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaatataacttt 26776635  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || |||||||||||||||||| ||| ||| || ||||||||||||||  || | |||||||||||||  ||||||| |||| ||    
T  26776636 acaagaaatggctagaaccatgattcatgaaaacaatttggctaaacatttttgggcagaagcagtaaatacaacatgttatgtccaaaatagaatctat 26776735  T
Q  298 atcagacctat 308  Q
    || ||||||||    
T  26776736 attagacctat 26776746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 26759813 - 26759603
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||||||| |||| || ||| ||| ||||| ||||| |||| |||||||||||||||| |||||||||| | ||||    
T  26759813 catttgaacttttttgtgaaaaacatggaattgtccatgaattcacttctcctaaaactccacaacaaaatggagttgtagagagaaagaacagaacttt 26759714  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || |||||||||||||||||| ||| ||| |  ||||||||||||||  |  | |||||||||||||  ||||||| |||| ||    
T  26759713 acaagaaatggctagaaccatgattcatgaaaacaatttggctaaacttttttgggcagaagcagtgaatacaacatgttatgtccaaaatagaatctat 26759614  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  26759613 atcagacctat 26759603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 21669780 - 21669885
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || || |||||||||||||||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  21669780 catttgaatctttttgtgaagaacatggaattatccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 21669879  T
Q  199 acaaga 204  Q
    ||||||    
T  21669880 acaaga 21669885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 21202897 - 21203002
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||||| |||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||| | | ||||    
T  21202897 catttgaatctttttgtgaaaaacagggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaatagaacttt 21202996  T
Q  199 acaaga 204  Q
    ||||||    
T  21202997 acaaga 21203002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 23485117 - 23485012
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||  ||||||| |||||||| ||||||||||   ||||    
T  23485117 catttgaatctttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacagcaaaatggggttgtagagagaaagaacaggacttt 23485018  T
Q  199 acaaga 204  Q
    ||||||    
T  23485017 acaaga 23485012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 20783973 - 20784135
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || ||||||| || ||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  20783973 catttgaatctttttgtgaaaaacatgggattctccatgaattctcttctcttagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 20784072  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || |||||||||||||||||| | | ||| || || |||||||||||    
T  20784073 acaagaaatggccagaaccatgattcatgaaaacaatttagctaaacatttctgggcagaagc 20784135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 31443819 - 31443981
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  31443819 catttgaatctttttgtgaaaaacatggtattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 31443918  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || |||||||||||||||||| | | ||| || || |||||||||||    
T  31443919 acaagaaatggccagaacaatgattcatgaaaacaatttagctaaacatttctgggcagaagc 31443981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 17453645 - 17453540
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| | |||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  17453645 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttcttctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 17453546  T
Q  199 acaaga 204  Q
    ||||||    
T  17453545 acaaga 17453540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 19467900 - 19468005
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  19467900 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 19467999  T
Q  199 acaaga 204  Q
    ||||||    
T  19468000 acaaga 19468005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 24943511 - 24943406
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||| |||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  24943511 catttaaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 24943412  T
Q  199 acaaga 204  Q
    ||||||    
T  24943411 acaaga 24943406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 34055861 - 34055966
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||| |||| ||| |||| || ||||| | |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  34055861 catttgaatctttttgtgaaaaatatgggattctccatgaattctcctctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 34055960  T
Q  199 acaaga 204  Q
    ||||||    
T  34055961 acaaga 34055966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 1118235 - 1118145
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaa 189  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| ||||||||    
T  1118235 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaa 1118145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 9339883 - 9339988
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||||    
T  9339883 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacttt 9339982  T
Q  199 acaaga 204  Q
    ||||||    
T  9339983 acaaga 9339988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 22680044 - 22680149
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||||    
T  22680044 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacttt 22680143  T
Q  199 acaaga 204  Q
    ||||||    
T  22680144 acaaga 22680149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 23399839 - 23399944
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| |  |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| || ||||||| | ||||    
T  23399839 catttgaatctttttgcgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagaggaagaacagaacttt 23399938  T
Q  199 acaaga 204  Q
    ||||||    
T  23399939 acaaga 23399944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 23700708 - 23700813
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||||    
T  23700708 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacttt 23700807  T
Q  199 acaaga 204  Q
    ||||||    
T  23700808 acaaga 23700813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 27049170 - 27049065
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||| |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  27049170 catttgaatttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 27049071  T
Q  199 acaaga 204  Q
    ||||||    
T  27049070 acaaga 27049065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 30234359 - 30234254
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||||    
T  30234359 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacttt 30234260  T
Q  199 acaaga 204  Q
    ||||||    
T  30234259 acaaga 30234254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 42046708 - 42046813
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||||    
T  42046708 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacttt 42046807  T
Q  199 acaaga 204  Q
    ||||||    
T  42046808 acaaga 42046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 13530211 - 13530103
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaat---ggagttgtagatagaaagaacaaacc 195  Q
    |||||||||||||| || |||||||||||||| || | || ||||||| |||||||||| ||||  |||||   || |||||||| |||||||||| | |    
T  13530211 catttgaatctttttgtgaaaaacatggaattgtcaatgaattctcttctcctagaactccacagcaaaatgggggtgttgtagagagaaagaacagaac 13530112  T
Q  196 tttacaaga 204  Q
    |||||||||    
T  13530111 tttacaaga 13530103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 35219431 - 35219593
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  35219431 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 35219530  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  35219531 acaagaaatggccagaaccatgatccatgaaaacaatttagctaaacatttttgggcagaagc 35219593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 37736900 - 37736738
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  37736900 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 37736801  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  37736800 acaagaaatggccagaaccatgatccatgaaaacaatttagctaaacatttttgggcagaagc 37736738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 6979734 - 6979839
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  6979734 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 6979833  T
Q  199 acaaga 204  Q
    ||||||    
T  6979834 acaaga 6979839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 14033970 - 14034075
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  14033970 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 14034069  T
Q  199 acaaga 204  Q
    ||||||    
T  14034070 acaaga 14034075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 14453945 - 14453840
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||  |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||||    
T  14453945 catttgaacttttttgtgaaaaacatgggatactccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacttt 14453846  T
Q  199 acaaga 204  Q
    ||||||    
T  14453845 acaaga 14453840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 14564986 - 14564881
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  14564986 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 14564887  T
Q  199 acaaga 204  Q
    ||||||    
T  14564886 acaaga 14564881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 15743897 - 15744002
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  15743897 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 15743996  T
Q  199 acaaga 204  Q
    ||||||    
T  15743997 acaaga 15744002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 22150444 - 22150549
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  22150444 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 22150543  T
Q  199 acaaga 204  Q
    ||||||    
T  22150544 acaaga 22150549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 23300205 - 23300310
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  23300205 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 23300304  T
Q  199 acaaga 204  Q
    ||||||    
T  23300305 acaaga 23300310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 23365864 - 23365969
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  23365864 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 23365963  T
Q  199 acaaga 204  Q
    ||||||    
T  23365964 acaaga 23365969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 24571000 - 24571105
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  24571000 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 24571099  T
Q  199 acaaga 204  Q
    ||||||    
T  24571100 acaaga 24571105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 24823809 - 24823704
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  24823809 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 24823710  T
Q  199 acaaga 204  Q
    ||||||    
T  24823709 acaaga 24823704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 27464090 - 27464195
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  27464090 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 27464189  T
Q  199 acaaga 204  Q
    ||||||    
T  27464190 acaaga 27464195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 27619105 - 27619000
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  27619105 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 27619006  T
Q  199 acaaga 204  Q
    ||||||    
T  27619005 acaaga 27619000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 31837408 - 31837513
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  31837408 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 31837507  T
Q  199 acaaga 204  Q
    ||||||    
T  31837508 acaaga 31837513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 36589450 - 36589345
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  36589450 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 36589351  T
Q  199 acaaga 204  Q
    ||||||    
T  36589350 acaaga 36589345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 39356424 - 39356529
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || ||||| |||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  39356424 catttgaacttttttgtgaaaaatatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 39356523  T
Q  199 acaaga 204  Q
    ||||||    
T  39356524 acaaga 39356529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 39497820 - 39497715
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  39497820 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 39497721  T
Q  199 acaaga 204  Q
    ||||||    
T  39497720 acaaga 39497715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 40394290 - 40394395
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  40394290 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 40394389  T
Q  199 acaaga 204  Q
    ||||||    
T  40394390 acaaga 40394395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 5297475 - 5297383
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaaca 191  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| ||||||||||    
T  5297475 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaaca 5297383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 16000229 - 16000124
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||  |||||||| |||||||||| | | ||    
T  16000229 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatgaggttgtagagagaaagaacagaacctt 16000130  T
Q  199 acaaga 204  Q
    ||||||    
T  16000129 acaaga 16000124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 17610990 - 17611095
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| || ||||||| | | ||    
T  17610990 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaaggaagaacagaacctt 17611089  T
Q  199 acaaga 204  Q
    ||||||    
T  17611090 acaaga 17611095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 17722846 - 17722951
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| || ||||||| | | ||    
T  17722846 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaaggaagaacagaacctt 17722945  T
Q  199 acaaga 204  Q
    ||||||    
T  17722946 acaaga 17722951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 24811841 - 24811946
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| |||  ||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  24811841 catttgaacttttttgtgaaaaacatgggattcaccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 24811940  T
Q  199 acaaga 204  Q
    ||||||    
T  24811941 acaaga 24811946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 31352462 - 31352567
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| || ||||||| | | ||    
T  31352462 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaaggaagaacagaacctt 31352561  T
Q  199 acaaga 204  Q
    ||||||    
T  31352562 acaaga 31352567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 36691626 - 36691731
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| || ||||||| | | ||    
T  36691626 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaaggaagaacagaacctt 36691725  T
Q  199 acaaga 204  Q
    ||||||    
T  36691726 acaaga 36691731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 310
Target Start/End: Complemental strand, 1433 - 1219
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacct 196  Q
    |||||||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| |||||| |||| |||| |||||||| | | ||    
T  1433 gtcatttgaatctttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatgaagttctagaaagaaagaatagatct 1334  T
Q  197 ttacaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatca 295  Q
    |||||||| | |||    || |||||||||||||| ||| ||| ||| || || |||| |||||  ||| ||||||||||||||| |||||||| ||||     
T  1333 ttacaagaaatggctagaaccatgattcatgaaaataatttggctaaacatttctgggaagaagtaataaacacaacatgttatgttcaaaatagaatct 1234  T
Q  296 atatcagacctatat 310  Q
    |||||||| ||||||    
T  1233 atatcagatctatat 1219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 8e-25; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 100 - 308
Target Start/End: Original strand, 13121856 - 13122066
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||| |||  |||    
T  13121856 catttgaacatttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaaaaaaaattt 13121955  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || |||||||||||||||||| ||| ||| || || |||||||||||  |  | |||||||||||||  ||||||| |||| ||    
T  13121956 acaagaaatggctagaaccatgattcatgaaaacaatttggctaaacatttctgggcagaagcagtgaatacaacatgttatgtccaaaatagaatctat 13122055  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  13122056 atcagacctat 13122066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 100 - 308
Target Start/End: Original strand, 16313407 - 16313617
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || ||||| | ||||||||||| |||| ||||||| |||||||| |||||||| ||| ||||    
T  16313407 catttgaatctttttgtgaaaaacatggaattttccatgaattctcctctcctagaactctacaacaaaatggggttgtagagagaaagaataaaacttt 16313506  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || |||||||||||||||||| ||| ||| || || |||| ||||||  |  |  ||||||||||||  ||||||| |||| ||    
T  16313507 acaagaaatggctagaaccatgattcatgaaaacaatttggataaacatttatgggtagaagcagtgaatccaacatgttatgtccaaaatagaatctat 16313606  T
Q  298 atcagacctat 308  Q
    |||| ||||||    
T  16313607 atcaaacctat 16313617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 18435503 - 18435396
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacct 196  Q
    |||||||||||||||| || |||||||||| ||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||| |     
T  18435503 gtcatttgaatctttttgtgaaaaacatgggattctccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaacaaaacc 18435404  T
Q  197 ttacaaga 204  Q
    ||||||||    
T  18435403 ttacaaga 18435396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 13663411 - 13663201
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || ||||||||||||||||||| || || |||| |||||||||| ||||||||||||| |||||||| |||||||| | | ||||    
T  13663411 catttgaacttttttgtgaaaaacatggaattatccatgaattatcttctcctagaactccacaataaaatggggttgtagagagaaagaatagaacttt 13663312  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || |||||||||||||||||| ||| |||  | || | |||||||||  |  | ||||||||| |||  ||||||| |||| ||    
T  13663311 acaagaaatggctagaaccatgattcatgaaaacaatttggctaaagatttctaggcagaagcagtgaatacaacatgtcatgtccaaaatagaatctat 13663212  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  13663211 atcagacctat 13663201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 100 - 310
Target Start/End: Complemental strand, 16404118 - 16403906
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| ||| ||||||||||||| |||| || ||||||| ||||||||| | |||  ||||||   ||||||| |||||||| | | ||||    
T  16404118 catttgaaattttttgtacaaaacatggaattctccatgaattctcttctcctagaacgccacagcaaaatgagattgtagagagaaagaatagatcttt 16404019  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || |||||||||||||| ||| ||| ||| || ||||||| |||||| ||  | ||||||||||||| |||||||| |||| ||    
T  16404018 acaagaaatggctagaaccatgattcatgaaaataatttggctaaacatttttgggtagaagcaatgaatacaacatgttatgttcaaaatagaatctat 16403919  T
Q  298 atcagacctatat 310  Q
    |||||||||||||    
T  16403918 atcagacctatat 16403906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 117 - 308
Target Start/End: Original strand, 16552452 - 16552645
Alignment:
Q  117 aaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttacaagata-ggcacaca 214  Q
    |||||||||||||||||||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||| | | |||||||||| | |||    |    
T  16552452 aaaaaacatggaattatccatgaattctcttatcctagaactccacaacaaaatggggttgtagagagaaagaatagaactttacaagaaatggctagaa 16552551  T
Q  215 cgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaatatcagacctat 308  Q
    | |||||||||||||| ||| |||  || || ||| |||||||||   |  | |||||| ||||||  ||||||| |||| |||||||||||||    
T  16552552 ccatgattcatgaaaaaaatttggcaaaacattttagggcagaagtagtgaatacaacacgttatgtccaaaatagaatctatatcagacctat 16552645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 117 - 308
Target Start/End: Complemental strand, 16613210 - 16613017
Alignment:
Q  117 aaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttacaagata-ggcacaca 214  Q
    |||||||||||||||||||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||| | | |||||||||| | |||    |    
T  16613210 aaaaaacatggaattatccatgaattctcttatcctagaactccacaacaaaatggggttgtagagagaaagaatagaactttacaagaaatggctagaa 16613111  T
Q  215 cgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaatatcagacctat 308  Q
    | |||||||||||||| ||| |||  || || ||| |||||||||   |  | |||||| ||||||  ||||||| |||| |||||||||||||    
T  16613110 ccatgattcatgaaaaaaatttggcaaaacattttagggcagaagtagtgaatacaacacgttatgtccaaaatagaatctatatcagacctat 16613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 4415896 - 4416000
Alignment:
Q  101 atttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttta 199  Q
    ||||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||  ||||||| |||||||| |||||||| | | |||||    
T  4415896 atttgaatctttttgtgaaaaacatggaattgtccatgaattctcttatcctagaactccacagcaaaatggggttgtagagagaaagaatagaacttta 4415995  T
Q  200 caaga 204  Q
    |||||    
T  4415996 caaga 4416000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 103 - 204
Target Start/End: Complemental strand, 9166593 - 9166491
Alignment:
Q  103 ttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttaca 201  Q
    ||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | |||||||    
T  9166593 ttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaactttaca 9166494  T
Q  202 aga 204  Q
    |||    
T  9166493 aga 9166491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 20997308 - 20997413
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| ||||||||||| |||| ||||||| |||||||| |||||||||||| ||||    
T  20997308 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacaaaacttt 20997407  T
Q  199 acaaga 204  Q
    ||||||    
T  20997408 acaaga 20997413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 25205118 - 25205223
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| || || ||||||| |||||||| |||||||||| | ||||    
T  25205118 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccataacaaaatggggttgtagaaagaaagaacagaacttt 25205217  T
Q  199 acaaga 204  Q
    ||||||    
T  25205218 acaaga 25205223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 15881712 - 15881817
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| |||||||  ||||||| |||||||||| | | ||    
T  15881712 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatgggattgtagagagaaagaacagaacctt 15881811  T
Q  199 acaaga 204  Q
    ||||||    
T  15881812 acaaga 15881817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 24741115 - 24741010
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  24741115 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacttt 24741016  T
Q  199 acaaga 204  Q
    ||||||    
T  24741015 acaaga 24741010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 40045993 - 40046098
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  40045993 catttgaacttttttgtgaaaaacatgggattctccatgagttctcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 40046092  T
Q  199 acaaga 204  Q
    ||||||    
T  40046093 acaaga 40046098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 310
Target Start/End: Original strand, 16155902 - 16156113
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||||||| |||| ||||  ||||||||| ||||| |||| ||||| ||||| | | |||||| |||||||| | | ||||    
T  16155902 catttgaatctttttgtgaaaaacatgaaattgtccataatttctcttctcctacaactccacaagaaaatag-gctgtagaaagaaagaatatatcttt 16156000  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||     | |||||||||||||||||| ||| ||| |  |||||||||||||   || || |||| ||||||| |||||||| |||  ||    
T  16156001 acaagaaatggctagagccatgattcatgaaaacaatttggctaaacttttttgggcagaagtagtaaacgcaacgtgttatgttcaaaatagaatatat 16156100  T
Q  298 atcagacctatat 310  Q
    || ||||||||||    
T  16156101 attagacctatat 16156113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 1994570 - 1994408
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  1994570 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 1994471  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  1994470 acaagaaatggccagaaccatgatccatgaaaacaatttagctaaacatttttgggcagaagc 1994408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 14142879 - 14142789
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaa 189  Q
    ||||||||  |||| || ||||||||| |||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| ||||||||    
T  14142879 catttgaacttttttgtgaaaaacatgaaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaa 14142789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 308
Target Start/End: Original strand, 26657224 - 26657434
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  26657224 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 26657323  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || ||||| |||||||||||  | | ||| || ||||||||||||||  || | ||  ||||||||  ||||||||  ||| ||    
T  26657324 acaagaaatggccagaaccatgatccatgaaaacaacttagctaaacatttttgggcagaagcagtaaatacttcatgttatattcaaaataggatctat 26657423  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  26657424 atcagacctat 26657434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 42872862 - 42872700
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  42872862 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 42872763  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  42872762 acaagaaatggccagaaccatgatccatgaaaacaatttagctaaacatttttgggcagaagc 42872700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 460875 - 460980
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  460875 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaagaaaatggggttgtagagagaaagaacagaacctt 460974  T
Q  199 acaaga 204  Q
    ||||||    
T  460975 acaaga 460980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 2709502 - 2709607
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  2709502 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 2709601  T
Q  199 acaaga 204  Q
    ||||||    
T  2709602 acaaga 2709607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 4219022 - 4218917
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  4219022 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 4218923  T
Q  199 acaaga 204  Q
    ||||||    
T  4218922 acaaga 4218917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 6871119 - 6871224
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  6871119 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 6871218  T
Q  199 acaaga 204  Q
    ||||||    
T  6871219 acaaga 6871224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 8005955 - 8006060
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | |||||||||| ||||| ||||| |||||||||| |||||||||| | ||||    
T  8005955 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatagagttgtagagagaaagaacagaacttt 8006054  T
Q  199 acaaga 204  Q
    ||||||    
T  8006055 acaaga 8006060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 9440277 - 9440172
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  9440277 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 9440178  T
Q  199 acaaga 204  Q
    ||||||    
T  9440177 acaaga 9440172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 13876522 - 13876417
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||||||| |||| || ||||||| ||||| || | ||||| ||||||| |||||||| |||||||| | | ||||    
T  13876522 catttgaacttttttgtgaaaaacatggaattgtccatgaattctcttctcctaaaattccacaacaaaatggggttgtagagagaaagaatagaacttt 13876423  T
Q  199 acaaga 204  Q
    ||||||    
T  13876422 acaaga 13876417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 20986271 - 20986166
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  20986271 catttgaacttttttgtgaaaaacatgggattgtccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 20986172  T
Q  199 acaaga 204  Q
    ||||||    
T  20986171 acaaga 20986166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 26393983 - 26394088
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  26393983 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 26394082  T
Q  199 acaaga 204  Q
    ||||||    
T  26394083 acaaga 26394088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 11012200 - 11012096
Alignment:
Q  101 atttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttta 199  Q
    |||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | |||    
T  11012200 atttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctta 11012101  T
Q  200 caaga 204  Q
    |||||    
T  11012100 caaga 11012096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 173904 - 173799
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  173904 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacatt 173805  T
Q  199 acaaga 204  Q
    ||||||    
T  173804 acaaga 173799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 289
Target Start/End: Original strand, 7418301 - 7418426
Alignment:
Q  165 aaaatggagttgtagatagaaagaacaaacctttacaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctat 263  Q
    |||||||||||||||| |||||||| | || | ||||||| | || || ||| |||||||||||||   ||||||| ||| | ||||| ||||||| | |    
T  7418301 aaaatggagttgtagagagaaagaatagacatctacaagaaatggaacgcaccatgattcatgaaactgatatggtaaagtacttttgagcagaagttgt 7418400  T
Q  264 atacacaacatgttatgatcaaaata 289  Q
    | ||||  ||||||||| ||||||||    
T  7418401 aaacacggcatgttatgttcaaaata 7418426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 8624359 - 8624254
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  8624359 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacatt 8624260  T
Q  199 acaaga 204  Q
    ||||||    
T  8624259 acaaga 8624254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 22096155 - 22096050
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  22096155 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 22096056  T
Q  199 acaaga 204  Q
    ||||||    
T  22096055 acaaga 22096050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0624 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0624
Description:

Target: scaffold0624; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 8652 - 8757
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||||||||||||||||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  8652 catttgaatctttttgtgaaaaacatggaattatccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 8751  T
Q  199 acaaga 204  Q
    ||||||    
T  8752 acaaga 8757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 13514 - 13619
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||| ||||    
T  13514 catttgaatctttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaacaaaacttt 13613  T
Q  199 acaaga 204  Q
    ||||||    
T  13614 acaaga 13619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 5131 - 5236
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  5131 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 5230  T
Q  199 acaaga 204  Q
    ||||||    
T  5231 acaaga 5236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 3839955 - 3839850
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||||||||||||||||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  3839955 catttgaatctttttgtgaaaaacatggaattatccatgaattctcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacttt 3839856  T
Q  199 acaaga 204  Q
    ||||||    
T  3839855 acaaga 3839850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 22150587 - 22150691
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||||||||||||||||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  22150587 catttgaatctttt-gtgaaaaacatggaattatccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 22150685  T
Q  199 acaaga 204  Q
    ||||||    
T  22150686 acaaga 22150691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 21295265 - 21295158
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacct 196  Q
    |||||||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||  ||||||| |||||||| |||||||||| | ||    
T  21295265 gtcatttgaatctttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacagcaaaatggggttgtagagagaaagaacataact 21295166  T
Q  197 ttacaaga 204  Q
     |||||||    
T  21295165 ctacaaga 21295158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 23801721 - 23801618
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||||| || || ||||||||| ||||||||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  23801721 catttgaatctctttgtgaaaaacatgaaattatccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 23801622  T
Q  199 acaa 202  Q
    ||||    
T  23801621 acaa 23801618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 22670055 - 22669845
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || ||||| |||||||| |||| || ||||||| |||||||||| ||||| |||||||| ||||||| |||||||| | | ||||    
T  22670055 catttgaaattttttgtgaaaaaaatggaattgtccatgaattctcttctcctagaactccacaacaaaatggacttgtagagagaaagaatagaacttt 22669956  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    |||||||||||| |||||||| ||| |||  | || | |||||||||  |  | |||||||||||||  ||||||| |||| ||    
T  22669955 acaagaaatggctagaacgatgattcataaaaacaatttggctaactatttctaggcagaagcagtgaatacaacatgttatgtccaaaatagaatctat 22669856  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  22669855 atcagacctat 22669845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 19231811 - 19231706
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  19231811 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 19231712  T
Q  199 acaaga 204  Q
    ||||||    
T  19231711 acaaga 19231706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 19425358 - 19425253
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  19425358 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacataacctt 19425259  T
Q  199 acaaga 204  Q
    ||||||    
T  19425258 acaaga 19425253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 248843 - 248736
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaacct 196  Q
    ||||||||||  |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||    
T  248843 gtcatttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaact 248744  T
Q  197 ttacaaga 204  Q
    ||||||||    
T  248743 ttacaaga 248736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 811944 - 811837
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaacct 196  Q
    ||||||||||  |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||    
T  811944 gtcatttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaact 811845  T
Q  197 ttacaaga 204  Q
    ||||||||    
T  811844 ttacaaga 811837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 16743705 - 16743495
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||| |||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  16743705 catttgaatctttttgtgaaaaatatggcattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 16743606  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || || |||||||||||  |  | ||  ||||||||  ||||||||| ||| ||    
T  16743605 acaagaaatggccagaactatgatccatgaaaacaatttagctaaacatttctgggcagaagcagttaatacttcatgttatattcaaaatatgatctat 16743506  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  16743505 atcagacctat 16743495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 20264423 - 20264513
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaac-tcacaataaaatggagttgtagatagaaagaa 189  Q
    |||||||||||||| || |||||||||||||| |||| || ||||||| ||||||||| |||||| ||||||| |||  ||| ||||||||    
T  20264423 catttgaatctttttgtgaaaaacatggaattgtccatgaattctcttctcctagaacttcacaacaaaatggggttaaagaaagaaagaa 20264513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 21051052 - 21051142
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaac-tcacaataaaatggagttgtagatagaaagaa 189  Q
    |||||||||||||| || |||||||||||||| |||| || ||||||| ||||||||| |||||| ||||||| |||  ||| ||||||||    
T  21051052 catttgaatctttttgtgaaaaacatggaattgtccatgaattctcttctcctagaacttcacaacaaaatggggttaaagaaagaaagaa 21051142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 30318545 - 30318650
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||| | |||||||| |||||||||| | | ||    
T  30318545 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatagggttgtagagagaaagaacagaacctt 30318644  T
Q  199 acaaga 204  Q
    ||||||    
T  30318645 acaaga 30318650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 32081536 - 32081641
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | ||||    
T  32081536 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacttt 32081635  T
Q  199 acaaga 204  Q
    ||||||    
T  32081636 acaaga 32081641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 186
Target Start/End: Original strand, 17292461 - 17292548
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaa 186  Q
    ||||||||  |||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||    
T  17292461 catttgaacttttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaa 17292548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 22465034 - 22465124
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaa 189  Q
    |||||||| ||||| || |||||||||||||||||||  | ||||||| ||||| |||| ||||  ||||||| |||||||| ||||||||    
T  22465034 catttgaagctttttgtgaaaaacatggaattatccataaattctcttctcctataactgcacagcaaaatggggttgtagagagaaagaa 22465124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 36084954 - 36084792
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  36084954 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 36084855  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  36084854 acaagaaatggccagaaccatgatccatgaaaacaatttagctaaacatttttgggcagaagc 36084792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 3352475 - 3352580
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  3352475 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 3352574  T
Q  199 acaaga 204  Q
    ||||||    
T  3352575 acaaga 3352580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 9348131 - 9348026
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  9348131 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 9348032  T
Q  199 acaaga 204  Q
    ||||||    
T  9348031 acaaga 9348026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 13692410 - 13692515
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  13692410 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 13692509  T
Q  199 acaaga 204  Q
    ||||||    
T  13692510 acaaga 13692515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 15784550 - 15784655
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || ||||||| |||||||||| ||||  ||||||| |||||||| |||||||||| | | ||    
T  15784550 catttgaacttttttgtgaaaaacatgggattctccatgagttctcttctcctagaactccacagcaaaatggggttgtagagagaaagaacagaacctt 15784649  T
Q  199 acaaga 204  Q
    ||||||    
T  15784650 acaaga 15784655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 29083424 - 29083319
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  29083424 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 29083325  T
Q  199 acaaga 204  Q
    ||||||    
T  29083324 acaaga 29083319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 36299941 - 36299854
Alignment:
Q  118 aaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttacaaga 204  Q
    |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||||||||    
T  36299941 aaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaaccttacaaga 36299854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 6158099 - 6157994
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  6158099 catttgaacttttttgtgaaaaacatgggattctccatgagttttcgtctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 6158000  T
Q  199 acaaga 204  Q
    ||||||    
T  6157999 acaaga 6157994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 19135713 - 19135608
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||  |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  19135713 catttgaacttttttgtgaaaaacatgggatactccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 19135614  T
Q  199 acaaga 204  Q
    ||||||    
T  19135613 acaaga 19135608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 19938337 - 19938232
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||||||| |||| || ||||||   ||||||||| ||||| ||||||  |||||||| |||||||| | | ||||    
T  19938337 catttgaacttttttgtgaaaaacatggaattgtccatgaattctctgcgcctagaactccacaacaaaatgaggttgtagagagaaagaatagaacttt 19938238  T
Q  199 acaaga 204  Q
    ||||||    
T  19938237 acaaga 19938232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 100 - 308
Target Start/End: Original strand, 25774359 - 25774569
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||||||||||||||||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||| | | ||||    
T  25774359 catttgaatctttttgtgaaaaacatggaattatccatgaattatcttctcctagaactccacaacaaaatggggttgtagagagaaagaatagaacttt 25774458  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | | |    || |||||||||||||||||| ||| ||| || || ||||||||||   |  | |||||||||||||  ||||||| |||| ||    
T  25774459 acaagaaatgactagaaccatgattcatgaaaacaatttggctaaacatttctgggcagaagtagtgaatacaacatgttatgtccaaaatagaatctat 25774558  T
Q  298 atcagacctat 308  Q
    |||||| ||||    
T  25774559 atcagatctat 25774569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 25680815 - 25680920
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  25680815 catttgaatctttttgtgaaaaacatggaattgtccatgaattctcttatcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacttt 25680914  T
Q  199 acaaga 204  Q
    ||||||    
T  25680915 acaaga 25680920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 22811841 - 22811631
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||| |||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||| | | ||||    
T  22811841 catttgaatttttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaatagaacttt 22811742  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    |  |||||||||||||||||| | | ||| || || |||||||||||  |  | ||| |||||||||  ||||||| |||| ||    
T  22811741 acaagaaatggctagaatcatgattcatgaaaacaattttgctaaacatttctgggcagaagcagtgaatacatcatgttatgtccaaaatagaatctat 22811642  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  22811641 atcagacctat 22811631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 17054496 - 17054391
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || ||||| | |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  17054496 catttgaatctttttgtgaaaaacatggaattttccatgaattctcgtctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 17054397  T
Q  199 acaaga 204  Q
    ||||||    
T  17054396 acaaga 17054391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 18828125 - 18828230
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  18828125 catttgaatctttttgtgaaaaacatgggattctccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacttt 18828224  T
Q  199 acaaga 204  Q
    ||||||    
T  18828225 acaaga 18828230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 100 - 310
Target Start/End: Original strand, 14057200 - 14057412
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||| | |||| || ||||||| |||||||||| | ||| ||||||| |||||||| |||||||| | | ||||    
T  14057200 catttgaatctttttgtgaaaaacatggaactgtccatgaattctcttctcctagaactcctcaacaaaatggggttgtagaaagaaagaatagaacttt 14057299  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || |||||||||||||||||| | | ||| || || |||||||||||  |  | ||  |||||||||  ||||||| |||| ||    
T  14057300 acaagaaatggctagaaccatgattcatgaaaacaatttagctaaacatttctgggcagaagcagttaatacttcatgttatgtccaaaatagaatctat 14057399  T
Q  298 atcagacctatat 310  Q
    |||||||||||||    
T  14057400 atcagacctatat 14057412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 17612401 - 17612504
Alignment:
Q  102 tttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttac 200  Q
    |||||||||||| ||||||||||||||||| |||| || ||||||| |||||||||| ||||  ||||||| |||||||| |||||||||| | || |||    
T  17612401 tttgaatctttttgtaaaaaacatggaattgtccatgaattctcttctcctagaactccacagcaaaatggggttgtagagagaaagaacagaactctac 17612500  T
Q  201 aaga 204  Q
    ||||    
T  17612501 aaga 17612504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 308
Target Start/End: Original strand, 19955727 - 19955937
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||| | | ||||    
T  19955727 catttgaacttttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaatagaacttt 19955826  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| |  ||    || |||||||||||||||||| ||| ||| || ||   |||||||||  |  | |||||||||||||  ||||||| |||| ||    
T  19955827 acaagagattgctagaaccatgattcatgaaaacaatttggctaaacatttcgaggcagaagcagtgaatacaacatgttatgtccaaaatagaatctat 19955926  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  19955927 atcagacctat 19955937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 310
Target Start/End: Original strand, 14063329 - 14063541
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||| | |||| || ||||||| |||||||||| | ||| ||||||| |||||||| |||||||| | | ||||    
T  14063329 catttgaatctttttgtgaaaaacatggaactgtccatgaattctcttctcctagaactcctcaacaaaatggggttgtagaaagaaagaatagaacttt 14063428  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || |||||||||||||||||| | | ||| || || |||||||||||  |  | ||  ||||||||   ||||||| |||| ||    
T  14063429 acaagaaatggctagaaccatgattcatgaaaacaatttagctaaacatttctgggcagaagcagttaatacttcatgttatatacaaaatagaatctat 14063528  T
Q  298 atcagacctatat 310  Q
    |||||||||||||    
T  14063529 atcagacctatat 14063541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 20033740 - 20033845
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || || | ||||||||||| |||| |||||||||||||||| |||||||||| | | ||    
T  20033740 catttgaatctttttgtgaaaaacatgggattctccatgaattttcctctcctagaactccacaacaaaatggagttgtagagagaaagaacagaacctt 20033839  T
Q  199 acaaga 204  Q
    ||||||    
T  20033840 acaaga 20033845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 308
Target Start/End: Complemental strand, 16883103 - 16882912
Alignment:
Q  119 aaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttacaagata-ggcacacacg 216  Q
    ||||||||||||| |||| || ||||||| |||||||||| || || ||||| | |||||||| |||||||| | | |||||||||| | |||    ||     
T  16883103 aaaacatggaattgtccatgaattctcttctcctagaactccataacaaaatagggttgtagagagaaagaatagaactttacaagaaatggccagaacc 16883004  T
Q  217 atgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaatatcagacctat 308  Q
    |||||||||||||| ||| ||| ||| || || ||||||||||   |  | |||||||||||||  ||||||| |||| |||||||||||||    
T  16883003 atgattcatgaaaataatttggctaaacatttatgggcagaagtagtcaatacaacatgttatgtccaaaatagaatctatatcagacctat 16882912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 27379777 - 27379567
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| | || || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  27379777 catttgaatctttttgtgaaaaacatgggattcttcatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 27379678  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || || ||||||||||| ||  | ||  ||||||||  ||||||||  ||| ||    
T  27379677 acaagaaatggccagaaccatgatccatgaaaacaatttagctaaacatttctgggcagaagcaattaatacttcatgttatattcaaaataggatctat 27379578  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  27379577 atcagacctat 27379567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 27470160 - 27469950
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| | || || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  27470160 catttgaatctttttgtgaaaaacatgggattcttcatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 27470061  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || || ||||||||||| ||  | ||  ||||||||  ||||||||  ||| ||    
T  27470060 acaagaaatggccagaaccatgatccatgaaaacaatttagctaaacatttctgggcagaagcaattaatacttcatgttatattcaaaataggatctat 27469961  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  27469960 atcagacctat 27469950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 27500690 - 27500528
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  27500690 catttgaacttttttgtgaaaaacatgggattctccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 27500591  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  27500590 acaagaaatggccagaaccatgatccatgaaaacaatctagctaaacatttttgggcagaagc 27500528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 21126423 - 21126318
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||| |||| || |||||||||||||| |||| || ||||| | |||||||||| ||||| ||||||  |||||||| |||||||| | | ||||    
T  21126423 catttgaatttttttgtgaaaaacatggaattgtccatgaattctcctctcctagaactccacaacaaaatgaggttgtagaaagaaagaatagaacttt 21126324  T
Q  199 acaaga 204  Q
    ||||||    
T  21126323 acaaga 21126318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 22383001 - 22382898
Alignment:
Q  102 tttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttac 200  Q
    |||||||||||| |  |||||||||||||| |||| || ||||||| |||||||||| ||||  ||||| | |||||||| |||||||| | | ||||||    
T  22383001 tttgaatctttttgcgaaaaacatggaattgtccatgaattctcttctcctagaactccacagcaaaatagggttgtagagagaaagaaaagaactttac 22382902  T
Q  201 aaga 204  Q
    ||||    
T  22382901 aaga 22382898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 3668430 - 3668325
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  3668430 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 3668331  T
Q  199 acaaga 204  Q
    ||||||    
T  3668330 acaaga 3668325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 13920232 - 13920127
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  13920232 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 13920133  T
Q  199 acaaga 204  Q
    ||||||    
T  13920132 acaaga 13920127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 27348731 - 27348626
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  27348731 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 27348632  T
Q  199 acaaga 204  Q
    ||||||    
T  27348631 acaaga 27348626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 27409471 - 27409366
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  27409471 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 27409372  T
Q  199 acaaga 204  Q
    ||||||    
T  27409371 acaaga 27409366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 34810978 - 34811083
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  34810978 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacctt 34811077  T
Q  199 acaaga 204  Q
    ||||||    
T  34811078 acaaga 34811083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 203
Target Start/End: Complemental strand, 19446317 - 19446213
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||| | ||| || |||||||||||||| |||| || ||||||| |||||||||| ||||  ||||| | |||||||| |||||||| | | ||||    
T  19446317 catttgaaaccttttgtgaaaaacatggaattctccatgaattctcttctcctagaactccacagaaaaattgggttgtagagagaaagaatagaacttt 19446218  T
Q  199 acaag 203  Q
    |||||    
T  19446217 acaag 19446213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 26032406 - 26032314
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaaca 191  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| ||||||||||    
T  26032406 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaaca 26032314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 26040581 - 26040489
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaaca 191  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| ||||||||||    
T  26040581 catttgaacttttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaaca 26040489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 12720669 - 12720756
Alignment:
Q  118 aaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttacaaga 204  Q
    |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||||||||    
T  12720669 aaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaaccttacaaga 12720756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 4637912 - 4637807
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| || ||||||| | | ||    
T  4637912 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaaggaagaacagaacctt 4637813  T
Q  199 acaaga 204  Q
    ||||||    
T  4637812 acaaga 4637807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 9116307 - 9116412
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| ||||  | || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  9116307 catttgaacttttttgtgaaaaacatgggattctccattaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 9116406  T
Q  199 acaaga 204  Q
    ||||||    
T  9116407 acaaga 9116412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 12861917 - 12861812
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  12861917 catttgaacttttttgttaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacatt 12861818  T
Q  199 acaaga 204  Q
    ||||||    
T  12861817 acaaga 12861812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 32304861 - 32304966
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| || ||||||| | | ||    
T  32304861 catttgaacttttttgtgaaaaacatgggattctccatgagttttcttctcctagaactccacaacaaaatggggttgtagaaaggaagaacagaacctt 32304960  T
Q  199 acaaga 204  Q
    ||||||    
T  32304961 acaaga 32304966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 32965761 - 32965866
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||| ||| |||| || || || | |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  32965761 catttgaacttttttgtgaaaaacatgggattctccatgagttttcctctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacatt 32965860  T
Q  199 acaaga 204  Q
    ||||||    
T  32965861 acaaga 32965866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 26871770 - 26871626
Alignment:
Q  118 aaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaacctttacaagata-ggcacacac 215  Q
    |||||||||| ||| |||| || || || | ||||||||||| |||| ||||||| |||||||| |||||||||| | | |||||||| | ||||   ||    
T  26871770 aaaaacatgggattttccatgagttttcctctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacattacaagaaatggcaagaac 26871671  T
Q  216 gatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
     ||||| |||||||||||  | | ||| || ||||||||||||||    
T  26871670 catgatccatgaaaacaacttagctaaacatttttgggcagaagc 26871626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 27435 - 27273
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || || |||||||||||||||| || ||||||| |||||||||| ||||  ||||||| |||||||| |||||||||| | ||||    
T  27435 catttgaatctttttgtgaataacatggaattatccatgaattctcttctcctagaactccacagcaaaatggggttgtagagagaaagaacagaacttt 27336  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | |||    || ||||| |||||||||||| | | ||| || ||||||||||||||    
T  27335 acaagaaatggccagaaccatgatccatgaaaacaatttagctaaacatttttgggcagaagc 27273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 100 - 308
Target Start/End: Original strand, 29487 - 29697
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactca-caataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||||||| |||| || ||||||| ||||| |||||  ||| ||||||| |||||||| |||||||| | | ||||    
T  29487 catttgaacttttttgtgaaaaacatggaattgtccatgaattctcttctcctataactcctcaacaaaatggggttgtagaaagaaagaatagaacttt 29586  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || |||||||||||||||||| ||| |||  | || |||||||||||  |  | ||||||||||||| |||||||| |||| ||    
T  29587 acaagaaatggctagaaccatgattcatgaaaacaatttggctaaatatttctgggcagaagcagtgaatacaacatgttatgttcaaaatagaatctat 29686  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  29687 atcagacctat 29697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 5878 - 5983
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||||||||||||||||| || |||| || |||||||||| ||||  |||||||||||||||| |||||||||| | || |    
T  5878 catttgaatctttttgtgaaaaacatggaattatccatgaattcttttctcctagaactccacagcaaaatggagttgtagagagaaagaacagaactct 5977  T
Q  199 acaaga 204  Q
    ||||||    
T  5978 acaaga 5983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 23807 - 23702
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || ||||||||||||||||||| || ||||||| ||||| |||| ||||| ||||||| |||||||| |||||||| | | ||||    
T  23807 catttgaatctttttgtgaaaaacatggaattatccatgaattctcttctcctaaaactccacaacaaaatggggttgtagaaagaaagaatagaacttt 23708  T
Q  199 acaaga 204  Q
    ||||||    
T  23707 acaaga 23702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 46989 - 47094
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || ||||| | || |||||||| |||| ||||||| |||||||| |||||||||||| ||||    
T  46989 catttgaatctttttgtgaaaaacatggaattgtccatgaattctcctctcgtagaactccacaacaaaatggggttgtagagagaaagaacaaaacttt 47088  T
Q  199 acaaga 204  Q
    ||||||    
T  47089 acaaga 47094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 98 - 308
Target Start/End: Complemental strand, 4760 - 4548
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacct 196  Q
    ||||||||||  |||| || ||||| |||||||| |||| || ||||||| |||||||||| ||||| ||||||| ||||| || |||||||| | | ||    
T  4760 gtcatttgaacttttttgtgaaaaatatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgttgagagaaagaatataact 4661  T
Q  197 ttacaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatca 295  Q
    |||||||| | |||    || |||||||||||||||||| ||| ||| || || |||||||||||  |  | |||||||||||||  ||||||  ||||     
T  4660 ttacaagaaatggctagaaccatgattcatgaaaacaatttggctaaacatttctgggcagaagcagtgaatacaacatgttatgtccaaaatggaatct 4561  T
Q  296 atatcagacctat 308  Q
    |||||||||||||    
T  4560 atatcagacctat 4548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 98 - 308
Target Start/End: Original strand, 8840 - 9052
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacct 196  Q
    ||||||||||  |||| || ||||| |||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||| | | ||    
T  8840 gtcatttgaacttttttgtgaaaaatatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaatataact 8939  T
Q  197 ttacaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatca 295  Q
    |||||||| | |||    || |||||||||||||||||| ||| ||| || || |||| ||||||  |  | ||||||||||| |  ||||||| ||||     
T  8940 ttacaagaaatggctagaaccatgattcatgaaaacaatttggctaaacatttatgggtagaagcagtgaatacaacatgttacgtccaaaatagaatct 9039  T
Q  296 atatcagacctat 308  Q
    |||||||||||||    
T  9040 atatcagacctat 9052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 98 - 308
Target Start/End: Original strand, 160010 - 160222
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacct 196  Q
    ||||||||||  |||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||| | | ||    
T  160010 gtcatttgaacttttttgtgaaaaacatggaattctccatgaattctcttctcctagaactccacaacaaaatggggttgtagaaagaaagaatagaact 160109  T
Q  197 ttacaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatca 295  Q
    |||||||| | |||    || ||||| |||||||||||| ||| ||| || || | |||||||||  |  | |||||||||||||  ||||||| |||      
T  160110 ttacaagaaatggctagaaccatgatccatgaaaacaatttggctaaacatttctaggcagaagcagtgaatacaacatgttatgtccaaaatagaatat 160209  T
Q  296 atatcagacctat 308  Q
    |||||||||||||    
T  160210 atatcagacctat 160222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 4395 - 4500
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||| ||| |||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| | ||||    
T  4395 cattttaatatttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaatggggttgtagaaagaaagaacagaacttt 4494  T
Q  199 acaaga 204  Q
    ||||||    
T  4495 acaaga 4500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 310
Target Start/End: Complemental strand, 22107 - 21895
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaactc-acaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || ||||||||  |||| |||| || ||||||| ||||| | ||| |||| ||||||| |||||||| |||||||| | | | ||    
T  22107 catttgaaattttttgtgaaaaacataaaattgtccatgaattctcttctcctatatctccacaagaaaatggggttgtagagagaaagaatagaacatt 22008  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || ||||||||| |||||||| ||| ||| || || |||||||||||  || |||||||||||||||  ||||||| |||| ||    
T  22007 acaagaaatggctagaaccatgattcattaaaacaatttggctaaacatttatgggcagaagcagtagacacaacatgttatgtccaaaatagaatctat 21908  T
Q  298 atcagacctatat 310  Q
    |||||||||||||    
T  21907 atcagacctatat 21895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 16240 - 16343
Alignment:
Q  102 tttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttac 200  Q
    |||||||||||| || |||||||||||||| |||| || ||||||| |||||||||| ||||  ||||||| |||||||| |||||||||| | || |||    
T  16240 tttgaatctttttgtgaaaaacatggaattgtccatgaattctcttatcctagaactccacagcaaaatggggttgtagagagaaagaacagaactctac 16339  T
Q  201 aaga 204  Q
    ||||    
T  16340 aaga 16343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 22787 - 22682
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||||||| |||| || ||||| | |||||||||| ||||| ||||||| ||||| || ||||| |||| | ||||    
T  22787 catttgaatctttttgtgaaaaacatggaattgtccatgaattctcctctcctagaactccacaacaaaatggggttgtcgagagaaataacagaacttt 22688  T
Q  199 acaaga 204  Q
    ||||||    
T  22687 acaaga 22682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 36700 - 36805
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| |||||||||| | | ||    
T  36700 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaacagaacctt 36799  T
Q  199 acaaga 204  Q
    ||||||    
T  36800 acaaga 36805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 5332 - 5123
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaa-taaaatggagttgtagatagaaagaacaaacctt 197  Q
    |||||||||||||| || |||||||||||||| | || || ||||||| |||||||||| |||||  ||||||| |||||||| |||||||| | | |||    
T  5332 catttgaatctttttgtgaaaaacatggaattgtacatgagttctcttatcctagaactccacaacaaaaatggggttgtagagagaaagaatagaactt 5233  T
Q  198 tacaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaa 296  Q
    ||||||| | |||    || |||||||||||||||||| |||  || || || ||||||||||   |  | |||||||||||||  || |||| |||| |    
T  5232 tacaagaaatggctagaaccatgattcatgaaaacaatttgg--aaacatttatgggcagaagaagtgaatacaacatgttatgtccataatagaatcta 5135  T
Q  297 tatcagacctat 308  Q
    ||||||||||||    
T  5134 tatcagacctat 5123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 118 - 308
Target Start/End: Original strand, 1326 - 1518
Alignment:
Q  118 aaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttacaagata-ggcacacac 215  Q
    |||||||||||||| |||  || ||||||| |||||||||| ||||| ||||||| |||||||| |||||||| | | |||||||||| | |||    ||    
T  1326 aaaaacatggaattgtccctgaattctcttctcctagaactccacaacaaaatggggttgtagagagaaagaatagaactttacaagaaatggctagaac 1425  T
Q  216 gatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaatatcagacctat 308  Q
     ||||||||| |||||||| ||| ||| || || |||| |||||   |  | |||||||||||||  ||||||| |||| |||||||||||||    
T  1426 catgattcataaaaacaatttggctaaacatttatgggtagaaggagtgaatacaacatgttatgtccaaaatagaatctatatcagacctat 1518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 189
Target Start/End: Original strand, 46789 - 46881
Alignment:
Q  98 gtcatttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaa 189  Q
    |||||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| ||||| ||||||| |||||||| ||||||||    
T  46789 gtcatttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccacaacaaaatggggttgtagagagaaagaa 46881  T

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Target: scaffold0211 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 3528 - 3618
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaa 189  Q
    |||||||||||||| || ||||| |||||||| |||| || ||||||| |||||||||| ||||| | ||||| |||||||| ||||||||    
T  3528 catttgaatctttttgtgaaaaatatggaattgtccatgaattctcttctcctagaactccacaacagaatggggttgtagagagaaagaa 3618  T

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Target: scaffold0080 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 42835 - 42625
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||||||| |||| || ||||||| ||||| |||| ||||| ||||||||||||||   |||||||| | | ||||    
T  42835 catttgaacttttttgtgaaaaacatggaattttccatgaattctcttctcctataactccacaacaaaatggagttgtattgagaaagaatagaacttt 42736  T
Q  199 acaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaat 297  Q
    |||||| | |||    || |||||||||||||||| | ||| ||| || || ||||||||||   || | ||| |||||||||  ||||||| |||  ||    
T  42735 acaagaaatggctagaaccatgattcatgaaaacattttggctaaacatttatgggcagaagtagtaaatacatcatgttatgtccaaaatagaatatat 42636  T
Q  298 atcagacctat 308  Q
    |||||||||||    
T  42635 atcagacctat 42625  T

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Target: scaffold0315 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 308
Target Start/End: Complemental strand, 5375 - 5167
Alignment:
Q  102 tttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacctttac 200  Q
    ||||||| |||| || ||||||||| |||| |||| || ||||||| |||||||||| ||||| |||||||  ||||||| |||||||| | | ||||||    
T  5375 tttgaatttttttgtgaaaaacatgaaattgtccatgaattctcttctcctagaactccacaacaaaatgggattgtagaaagaaagaatagaactttac 5276  T
Q  201 aagataggcaca-cacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaatat 299  Q
    |||| | |  ||  ||  ||||||||||||||||| ||| ||| || || ||||||||||   |  | | |||||||||||  ||||||| |||| ||||    
T  5275 aagaaatggtcagaaccttgattcatgaaaacaatttggctaaacatttatgggcagaagtagtgaatataacatgttatgtccaaaatagaatctatat 5176  T
Q  300 cagacctat 308  Q
     ||||||||    
T  5175 tagacctat 5167  T

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Target: scaffold0387 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 308
Target Start/End: Complemental strand, 13983 - 13892
Alignment:
Q  217 atgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaatatcagacctat 308  Q
    |||||||||||||||||| ||| ||| || || |||||||||||  |  | ||| ||||||||| |||||||| |||| |||||||||||||    
T  13983 atgattcatgaaaacaatctggctaaacatttctgggcagaagcagtgaatacatcatgttatgttcaaaatagaatctatatcagacctat 13892  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 5099 - 5009
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaa 189  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||| ||||| ||||| ||||||| |||||||| ||||||||    
T  5099 catttgaatcttttggtgaaaaacatgggattgtccatgaattttcttctccttgaactccacaaaaaaatggggttgtagagagaaagaa 5009  T

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Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 5657 - 5747
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaa 189  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||| ||||| ||||| ||||||| |||||||| ||||||||    
T  5657 catttgaatcttttggtgaaaaacatgggattgtccatgaattttcttctccttgaactccacaaaaaaatggggttgtagagagaaagaa 5747  T

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Target: scaffold0004; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 12256 - 12166
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaa 189  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||| ||||| ||||| ||||||| |||||||| ||||||||    
T  12256 catttgaatcttttggtgaaaaacatgggattgtccatgaattttcttctccttgaactccacaaaaaaatggggttgtagagagaaagaa 12166  T

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Target: scaffold1732 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1732
Description:

Target: scaffold1732; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 1266 - 1323
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaac 157  Q
    |||||||||||||| || |||||||||||||| |||| || ||||||| |||||||||    
T  1266 catttgaatctttttgtgaaaaacatggaattgtccatgaattctcttctcctagaac 1323  T

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Target: scaffold0738 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0738
Description:

Target: scaffold0738; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 308
Target Start/End: Original strand, 5701 - 5914
Alignment:
Q  98 gtcatttgaatcttttcgt-aaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaacc 195  Q
    |||||||||||||||| || ||||||||| ||||| |||   | ||||||| |||||||||| ||||| |||||||  ||||||| |||||||| | | |    
T  5701 gtcatttgaatctttttgtgaaaaaacatagaattgtccgtaaattctcttctcctagaactccacaacaaaatgggattgtagagagaaagaatagaac 5800  T
Q  196 tttacaagata-ggcacacacgatgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatc 294  Q
    |||| |||| | ||     || |||||||||||||||||| ||| ||| || || |||||||||||  |  | ||| ||||||||   ||||||| ||||    
T  5801 tttaaaagaaatggttagtaccatgattcatgaaaacaatttggctaaacatttctgggcagaagcagtgaatacatcatgttatttccaaaatagaatc 5900  T
Q  295 aatatcagacctat 308  Q
     |||||||||||||    
T  5901 tatatcagacctat 5914  T

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Target: scaffold0217 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 13552 - 13480
Alignment:
Q  118 aaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaa 189  Q
    |||||||||||||| |||| || ||||||| |||||||||| | ||| ||||||| |||||||| ||||||||    
T  13552 aaaaacatggaattgtccatgaattctcttctcctagaactcctcaacaaaatggggttgtagagagaaagaa 13480  T

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Target: scaffold0193 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 308
Target Start/End: Complemental strand, 11697 - 11606
Alignment:
Q  217 atgattcatgaaaacaatatggttaagcagttttgggcagaagctatatacacaacatgttatgatcaaaatataatcaatatcagacctat 308  Q
    |||||||||||||||||| |||  || || || |||||||||||  |  | |||||||||||||  ||||||| |||| |||||||||||||    
T  11697 atgattcatgaaaacaatttggccaaacatttatgggcagaagcagtgaatacaacatgttatgtccaaaatagaatctatatcagacctat 11606  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 260
Target Start/End: Original strand, 113487 - 113649
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    ||||||||  |||| || |||||||||||||| |||| || ||||||| |||||||||| ||||| ||||| |  ||||||| |||||||  | | ||||    
T  113487 catttgaaattttttgtgaaaaacatggaattgtccatgaattctcttctcctagaactccacaacaaaataggattgtagagagaaagattagaacttt 113586  T
Q  199 acaagataggcaca-cacgatgattcatgaaaacaatatggttaagcagttttgggcagaagc 260  Q
    |||||| | ||  |  || |||||||||||||||||| ||  ||| || || |||||||||||    
T  113587 acaagaaatgcctagaaccatgattcatgaaaacaatttgactaaacatttctgggcagaagc 113649  T

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Target: scaffold0827 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 839 - 734
Alignment:
Q  100 catttgaatcttttcgtaaaaaacatggaattatccacgatttctcttgtcctagaact-cacaataaaatggagttgtagatagaaagaacaaaccttt 198  Q
    |||||||||||||| || |||||||||| ||| |||| || || |||| |||||||||| | ||| |||||||  ||||||  | |||||||| | ||||    
T  839 catttgaatctttttgtgaaaaacatgggattctccatgaattttcttctcctagaactccgcaacaaaatgggattgtagggaaaaagaacagaacttt 740  T
Q  199 acaaga 204  Q
    ||||||    
T  739 acaaga 734  T

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Target: scaffold0084 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 45386 - 45346
Alignment:
Q  268 acaacatgttatgatcaaaatataatcaatatcagacctat 308  Q
    |||||||||||||  |||||||||||| |||||||||||||    
T  45386 acaacatgttatgtccaaaatataatctatatcagacctat 45346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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