View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14811_low_6 (Length: 219)
Name: NF14811_low_6
Description: NF14811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14811_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 21 - 204
Target Start/End: Original strand, 54655425 - 54655609
Alignment:
| Q |
21 |
caaattgactttgaagcatacctttcaaatagtacatccctgtgtaatttaaaacaccataattaaggttannnnnnncccatacgtgttcttgttttaa |
120 |
Q |
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| T |
54655425 |
caaattgactttgaagcataactttcaaatagtacatccctgtgtaatttaaaacaccataattaaggttatttttttcccatacatgttcttgttttaa |
54655524 |
T |
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| Q |
121 |
aaatggctggc-ggaatggagagtggattctgaaaaaataaccccgattgccattnnnnnnntatttcaattccttgtctaatct |
204 |
Q |
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| T |
54655525 |
aaatggctggcgggaatggagagtggattctgaaaaaataaccccgattgccattaaaaaaatatttcaattccttgtctaatct |
54655609 |
T |
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