View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14812_high_18 (Length: 238)

Name: NF14812_high_18
Description: NF14812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14812_high_18
NF14812_high_18
[»] chr1 (65 HSPs)
chr1 (41-199)||(14625369-14625526)
chr1 (50-199)||(9441566-9441715)
chr1 (50-202)||(9442899-9443051)
chr1 (38-199)||(14626676-14626837)
chr1 (50-198)||(52084735-52084884)
chr1 (50-199)||(37194400-37194547)
chr1 (50-198)||(13917181-13917327)
chr1 (50-112)||(52083636-52083697)
chr1 (41-201)||(23322510-23322670)
chr1 (60-203)||(43635830-43635970)
chr1 (52-128)||(13916161-13916236)
chr1 (41-200)||(23321261-23321420)
chr1 (50-196)||(2273503-2273647)
chr1 (60-199)||(8930267-8930404)
chr1 (52-128)||(5560942-5561017)
chr1 (140-207)||(26097026-26097093)
chr1 (50-121)||(27547403-27547473)
chr1 (50-112)||(6077025-6077087)
chr1 (150-199)||(13903380-13903429)
chr1 (140-196)||(1825296-1825352)
chr1 (140-200)||(26095812-26095872)
chr1 (141-204)||(8928809-8928872)
chr1 (140-197)||(47146367-47146425)
chr1 (141-202)||(16785718-16785779)
chr1 (140-197)||(31648585-31648642)
chr1 (150-199)||(38742390-38742439)
chr1 (52-112)||(37193563-37193623)
chr1 (152-204)||(44311202-44311254)
chr1 (52-112)||(51903390-51903450)
chr1 (41-128)||(2274563-2274649)
chr1 (141-200)||(32131903-32131962)
chr1 (140-203)||(51470124-51470187)
chr1 (141-199)||(14978709-14978767)
chr1 (141-203)||(33645009-33645071)
chr1 (140-200)||(33667631-33667692)
chr1 (141-197)||(13902066-13902122)
chr1 (60-128)||(30536437-30536504)
chr1 (140-200)||(44200325-44200385)
chr1 (152-203)||(22591275-22591326)
chr1 (140-199)||(24963002-24963061)
chr1 (140-203)||(38741470-38741533)
chr1 (166-200)||(9439427-9439461)
chr1 (166-200)||(24987606-24987640)
chr1 (141-202)||(25600926-25600988)
chr1 (166-204)||(27265936-27265973)
chr1 (166-200)||(28797386-28797420)
chr1 (50-92)||(40373522-40373564)
chr1 (62-128)||(44311277-44311342)
chr1 (166-203)||(2472385-2472422)
chr1 (166-199)||(18458827-18458860)
chr1 (166-199)||(25235773-25235806)
chr1 (166-199)||(47022094-47022127)
chr1 (140-185)||(51809769-51809814)
chr1 (140-203)||(1826433-1826497)
chr1 (168-204)||(7112748-7112784)
chr1 (60-128)||(8928886-8928953)
chr1 (166-198)||(10028002-10028034)
chr1 (152-204)||(15336369-15336421)
chr1 (166-202)||(22604687-22604723)
chr1 (140-203)||(24004514-24004578)
chr1 (140-203)||(24730051-24730115)
chr1 (168-204)||(30659435-30659471)
chr1 (152-203)||(32130639-32130691)
chr1 (152-200)||(35168019-35168067)
chr1 (60-128)||(37268893-37268960)
[»] chr3 (58 HSPs)
chr3 (41-197)||(10615276-10615431)
chr3 (41-199)||(10616672-10616832)
chr3 (50-198)||(46610009-46610156)
chr3 (52-203)||(28208057-28208207)
chr3 (60-199)||(37977429-37977564)
chr3 (50-203)||(46597418-46597570)
chr3 (52-112)||(28207063-28207123)
chr3 (50-199)||(15086221-15086370)
chr3 (60-200)||(46596093-46596232)
chr3 (50-128)||(48288271-48288348)
chr3 (50-199)||(22256201-22256350)
chr3 (60-200)||(15093633-15093773)
chr3 (52-112)||(43930712-43930772)
chr3 (140-199)||(18140939-18140998)
chr3 (52-112)||(2011872-2011932)
chr3 (140-204)||(18142196-18142260)
chr3 (50-112)||(24528472-24528534)
chr3 (50-112)||(27360496-27360558)
chr3 (140-198)||(54567742-54567800)
chr3 (140-203)||(24729629-24729693)
chr3 (140-196)||(48044276-48044332)
chr3 (53-112)||(52396360-52396419)
chr3 (150-204)||(12066223-12066277)
chr3 (150-196)||(24910940-24910986)
chr3 (141-199)||(31835841-31835899)
chr3 (140-202)||(34062337-34062399)
chr3 (140-201)||(38843548-38843610)
chr3 (150-198)||(12210028-12210076)
chr3 (52-112)||(27318166-27318226)
chr3 (140-199)||(37975968-37976028)
chr3 (166-202)||(49872974-49873010)
chr3 (140-199)||(7248864-7248923)
chr3 (140-203)||(11761077-11761140)
chr3 (140-199)||(25110060-25110119)
chr3 (140-199)||(54012587-54012646)
chr3 (141-204)||(54566506-54566568)
chr3 (140-197)||(4218865-4218923)
chr3 (166-200)||(6510213-6510247)
chr3 (140-197)||(27521521-27521579)
chr3 (140-201)||(28206979-28207041)
chr3 (140-198)||(29184980-29185038)
chr3 (152-205)||(1351478-1351531)
chr3 (60-113)||(16386511-16386564)
chr3 (60-113)||(24842905-24842958)
chr3 (166-199)||(36867882-36867915)
chr3 (166-203)||(47115587-47115624)
chr3 (166-199)||(51460788-51460821)
chr3 (52-112)||(2011141-2011201)
chr3 (140-200)||(14826074-14826134)
chr3 (140-199)||(18704952-18705012)
chr3 (167-199)||(20957195-20957227)
chr3 (60-112)||(27315279-27315331)
chr3 (152-200)||(33898283-33898331)
chr3 (140-204)||(34061338-34061402)
chr3 (152-204)||(39846591-39846643)
chr3 (52-112)||(43929992-43930052)
chr3 (140-184)||(45291434-45291478)
chr3 (166-198)||(49880762-49880794)
[»] chr5 (44 HSPs)
chr5 (41-199)||(15060162-15060320)
chr5 (41-200)||(15061724-15061882)
chr5 (41-199)||(11956138-11956296)
chr5 (50-199)||(15616409-15616558)
chr5 (41-201)||(41064141-41064301)
chr5 (41-199)||(41065557-41065715)
chr5 (50-198)||(21776816-21776964)
chr5 (41-200)||(11957549-11957708)
chr5 (50-198)||(30796579-30796726)
chr5 (41-200)||(15615101-15615259)
chr5 (52-201)||(30798490-30798638)
chr5 (60-204)||(11438333-11438476)
chr5 (41-128)||(21775532-21775618)
chr5 (50-199)||(40434316-40434463)
chr5 (41-112)||(29520220-29520291)
chr5 (50-204)||(10012717-10012869)
chr5 (41-128)||(29521330-29521416)
chr5 (60-198)||(37274748-37274883)
chr5 (50-112)||(40434561-40434623)
chr5 (140-197)||(28819537-28819594)
chr5 (50-126)||(8367908-8367983)
chr5 (166-206)||(22551514-22551554)
chr5 (140-203)||(35599307-35599371)
chr5 (140-199)||(9751675-9751734)
chr5 (140-199)||(38482317-38482376)
chr5 (140-198)||(12399585-12399643)
chr5 (66-128)||(33750988-33751049)
chr5 (140-197)||(10011619-10011676)
chr5 (140-197)||(13948581-13948638)
chr5 (50-126)||(11439709-11439784)
chr5 (140-199)||(4060458-4060517)
chr5 (166-209)||(10976772-10976815)
chr5 (141-204)||(11890099-11890161)
chr5 (166-204)||(33052811-33052849)
chr5 (152-201)||(889065-889114)
chr5 (140-197)||(5802416-5802473)
chr5 (140-200)||(9750445-9750506)
chr5 (153-202)||(15395540-15395589)
chr5 (166-199)||(29104443-29104476)
chr5 (150-198)||(29520136-29520182)
chr5 (150-202)||(11439806-11439858)
chr5 (140-199)||(19601265-19601325)
chr5 (140-200)||(26888456-26888516)
chr5 (60-128)||(40434057-40434123)
[»] chr4 (52 HSPs)
chr4 (41-199)||(20962193-20962350)
chr4 (50-199)||(29248241-29248389)
chr4 (41-200)||(34739886-34740045)
chr4 (41-203)||(34741294-34741456)
chr4 (41-199)||(29249610-29249768)
chr4 (41-198)||(20963600-20963757)
chr4 (52-198)||(12566850-12566996)
chr4 (41-199)||(50881324-50881480)
chr4 (52-112)||(46427158-46427218)
chr4 (52-200)||(50879907-50880053)
chr4 (55-200)||(43537752-43537895)
chr4 (41-128)||(55499321-55499407)
chr4 (68-195)||(51752686-51752812)
chr4 (141-199)||(54554382-54554440)
chr4 (41-201)||(55500305-55500466)
chr4 (52-128)||(43537521-43537596)
chr4 (151-199)||(51754210-51754258)
chr4 (140-198)||(34027193-34027251)
chr4 (141-197)||(21994328-21994384)
chr4 (66-202)||(40479442-40479577)
chr4 (141-202)||(17695972-17696034)
chr4 (140-201)||(34025911-34025972)
chr4 (140-198)||(54555350-54555408)
chr4 (141-202)||(11862026-11862087)
chr4 (60-112)||(2438337-2438389)
chr4 (150-210)||(11861891-11861951)
chr4 (151-199)||(43860923-43860971)
chr4 (151-199)||(49629634-49629681)
chr4 (140-199)||(14183610-14183669)
chr4 (141-196)||(51164020-51164075)
chr4 (140-198)||(550673-550731)
chr4 (140-202)||(6439181-6439243)
chr4 (166-200)||(11563542-11563576)
chr4 (166-200)||(37273420-37273454)
chr4 (140-202)||(40450254-40450316)
chr4 (140-186)||(44198610-44198656)
chr4 (140-198)||(50138488-50138546)
chr4 (60-113)||(7533674-7533727)
chr4 (140-185)||(13032900-13032945)
chr4 (166-199)||(20125443-20125476)
chr4 (166-199)||(21780121-21780154)
chr4 (166-199)||(24215766-24215799)
chr4 (166-203)||(35539805-35539842)
chr4 (50-127)||(37600875-37600951)
chr4 (152-201)||(41331766-41331815)
chr4 (167-203)||(9001439-9001475)
chr4 (60-112)||(9410085-9410137)
chr4 (152-196)||(12352470-12352514)
chr4 (140-200)||(20612964-20613024)
chr4 (166-202)||(50727586-50727622)
chr4 (166-202)||(50735600-50735636)
chr4 (60-128)||(51754118-51754185)
[»] chr7 (44 HSPs)
chr7 (50-201)||(17763333-17763484)
chr7 (41-203)||(17764600-17764762)
chr7 (41-128)||(48170162-48170248)
chr7 (50-202)||(1830808-1830959)
chr7 (52-199)||(34158057-34158203)
chr7 (41-199)||(9554160-9554318)
chr7 (52-199)||(1831892-1832037)
chr7 (52-108)||(48168915-48168971)
chr7 (52-199)||(9553399-9553546)
chr7 (50-128)||(11056803-11056880)
chr7 (41-128)||(25776406-25776492)
chr7 (140-199)||(48168849-48168908)
chr7 (150-199)||(1594133-1594182)
chr7 (52-112)||(13772551-13772612)
chr7 (60-112)||(35891092-35891144)
chr7 (152-199)||(33757409-33757456)
chr7 (140-205)||(8174877-8174942)
chr7 (52-112)||(13771646-13771706)
chr7 (152-207)||(13772973-13773029)
chr7 (152-199)||(23161099-23161147)
chr7 (60-128)||(24436305-24436372)
chr7 (166-202)||(44568844-44568880)
chr7 (60-112)||(47637801-47637853)
chr7 (141-199)||(8175970-8176029)
chr7 (140-203)||(13279416-13279479)
chr7 (152-199)||(19272460-19272507)
chr7 (140-199)||(42509037-42509096)
chr7 (140-203)||(11058169-11058234)
chr7 (166-204)||(23784578-23784616)
chr7 (150-196)||(48896481-48896527)
chr7 (141-205)||(1492753-1492818)
chr7 (140-181)||(1589403-1589444)
chr7 (166-199)||(6269527-6269560)
chr7 (166-199)||(9915650-9915683)
chr7 (166-199)||(9923562-9923595)
chr7 (140-201)||(14554447-14554508)
chr7 (141-198)||(35891010-35891067)
chr7 (167-200)||(35913310-35913343)
chr7 (166-203)||(38193219-38193256)
chr7 (140-199)||(5219035-5219095)
chr7 (140-203)||(13286864-13286928)
chr7 (166-198)||(23371449-23371481)
chr7 (166-198)||(39580191-39580223)
chr7 (140-199)||(47160493-47160553)
[»] chr2 (60 HSPs)
chr2 (41-200)||(1902928-1903087)
chr2 (51-200)||(38937419-38937567)
chr2 (41-201)||(1904309-1904469)
chr2 (38-198)||(44366867-44367027)
chr2 (50-198)||(38935945-38936091)
chr2 (41-198)||(7576325-7576481)
chr2 (50-203)||(38815003-38815155)
chr2 (53-200)||(38876934-38877080)
chr2 (51-128)||(38937000-38937076)
chr2 (57-199)||(7577693-7577835)
chr2 (50-128)||(21903995-21904072)
chr2 (52-181)||(38876006-38876135)
chr2 (41-128)||(38813646-38813732)
chr2 (41-197)||(16670500-16670655)
chr2 (40-199)||(23834580-23834738)
chr2 (52-128)||(11101165-11101239)
chr2 (41-128)||(16671704-16671790)
chr2 (140-205)||(15747744-15747809)
chr2 (50-198)||(5970666-5970810)
chr2 (52-199)||(36565235-36565381)
chr2 (50-128)||(44368294-44368371)
chr2 (41-199)||(23835674-23835830)
chr2 (48-198)||(5969725-5969878)
chr2 (52-112)||(18249716-18249776)
chr2 (52-204)||(31551903-31552050)
chr2 (41-199)||(18250790-18250948)
chr2 (141-195)||(28141691-28141745)
chr2 (50-128)||(41305952-41306029)
chr2 (166-207)||(34635697-34635738)
chr2 (153-204)||(16577359-16577410)
chr2 (168-203)||(38625162-38625197)
chr2 (145-199)||(19686183-19686237)
chr2 (140-200)||(22468223-22468284)
chr2 (140-200)||(22474444-22474505)
chr2 (140-199)||(28462492-28462552)
chr2 (140-200)||(30371383-30371443)
chr2 (141-201)||(39150223-39150282)
chr2 (140-204)||(44242354-44242418)
chr2 (166-209)||(30371621-30371664)
chr2 (141-199)||(8237988-8238046)
chr2 (166-200)||(19493473-19493507)
chr2 (140-186)||(19684215-19684261)
chr2 (166-200)||(22116153-22116187)
chr2 (140-197)||(22466982-22467040)
chr2 (166-204)||(29835096-29835134)
chr2 (50-112)||(41307057-41307119)
chr2 (166-199)||(17328091-17328124)
chr2 (140-201)||(28461065-28461125)
chr2 (140-201)||(28484591-28484652)
chr2 (52-112)||(10355232-10355292)
chr2 (52-112)||(11102077-11102137)
chr2 (168-204)||(18555834-18555870)
chr2 (166-198)||(19641446-19641478)
chr2 (166-198)||(19840039-19840071)
chr2 (60-112)||(22292564-22292616)
chr2 (56-112)||(22293460-22293516)
chr2 (140-204)||(32845661-32845725)
chr2 (153-201)||(33441502-33441550)
chr2 (166-198)||(37147551-37147583)
chr2 (152-200)||(38386170-38386218)
[»] chr8 (46 HSPs)
chr8 (41-201)||(39809987-39810147)
chr8 (41-197)||(27164559-27164714)
chr8 (41-199)||(27163115-27163273)
chr8 (50-198)||(39808649-39808795)
chr8 (39-199)||(42350076-42350236)
chr8 (50-198)||(42348961-42349108)
chr8 (52-112)||(28574624-28574684)
chr8 (49-112)||(5704439-5704502)
chr8 (41-200)||(1601671-1601827)
chr8 (51-128)||(1601164-1601240)
chr8 (50-198)||(1600077-1600222)
chr8 (50-128)||(1602808-1602885)
chr8 (140-198)||(2270290-2270348)
chr8 (52-197)||(28561435-28561579)
chr8 (52-197)||(28566933-28567077)
chr8 (52-128)||(28561931-28562006)
chr8 (52-128)||(28567429-28567504)
chr8 (140-200)||(39513865-39513925)
chr8 (140-199)||(14329599-14329658)
chr8 (140-199)||(40702009-40702068)
chr8 (60-198)||(6105555-6105693)
chr8 (140-201)||(12330330-12330391)
chr8 (55-112)||(28575027-28575084)
chr8 (145-201)||(31985008-31985065)
chr8 (140-185)||(34901515-34901560)
chr8 (166-203)||(34985347-34985384)
chr8 (52-112)||(3252248-3252308)
chr8 (167-203)||(27987552-27987588)
chr8 (167-203)||(28044854-28044890)
chr8 (140-204)||(39451499-39451563)
chr8 (168-199)||(12330590-12330621)
chr8 (166-204)||(29309559-29309597)
chr8 (60-113)||(16432695-16432748)
chr8 (166-199)||(25277731-25277764)
chr8 (166-203)||(27543650-27543687)
chr8 (140-198)||(31986227-31986287)
chr8 (140-201)||(39515121-39515182)
chr8 (166-198)||(960522-960554)
chr8 (60-112)||(5703138-5703190)
chr8 (60-112)||(21397802-21397854)
chr8 (60-112)||(21792295-21792347)
chr8 (152-203)||(28575122-28575174)
chr8 (140-200)||(31343601-31343661)
chr8 (152-204)||(37402478-37402530)
chr8 (60-128)||(39913854-39913921)
chr8 (168-204)||(43400665-43400701)
[»] chr6 (33 HSPs)
chr6 (52-199)||(24234328-24234475)
chr6 (41-199)||(24235531-24235689)
chr6 (38-198)||(22056482-22056642)
chr6 (41-198)||(22058179-22058336)
chr6 (50-181)||(24914456-24914586)
chr6 (41-200)||(56013-56171)
chr6 (60-202)||(34762178-34762319)
chr6 (50-112)||(5999795-5999857)
chr6 (50-199)||(12322713-12322861)
chr6 (51-198)||(54807-54952)
chr6 (39-199)||(12321561-12321721)
chr6 (140-198)||(14328645-14328703)
chr6 (140-198)||(14421655-14421713)
chr6 (52-203)||(6000582-6000733)
chr6 (82-200)||(33485017-33485135)
chr6 (150-199)||(3063492-3063541)
chr6 (140-198)||(33483696-33483755)
chr6 (140-206)||(14327361-14327427)
chr6 (140-206)||(14420371-14420437)
chr6 (140-186)||(19412402-19412448)
chr6 (166-204)||(29942468-29942506)
chr6 (166-207)||(24387786-24387827)
chr6 (143-204)||(30409671-30409732)
chr6 (152-200)||(5999715-5999763)
chr6 (166-202)||(9234811-9234847)
chr6 (166-198)||(10344050-10344082)
chr6 (166-198)||(13114398-13114430)
chr6 (140-196)||(13114624-13114680)
chr6 (167-199)||(22574056-22574088)
chr6 (152-200)||(26644700-26644748)
chr6 (152-200)||(26750666-26750714)
chr6 (141-197)||(30381567-30381623)
chr6 (140-212)||(30953810-30953882)
[»] scaffold0176 (1 HSPs)
scaffold0176 (50-203)||(196-350)
[»] scaffold0804 (1 HSPs)
scaffold0804 (38-199)||(2732-2893)
[»] scaffold0250 (2 HSPs)
scaffold0250 (60-200)||(11488-11628)
scaffold0250 (50-199)||(10079-10227)
[»] scaffold0228 (3 HSPs)
scaffold0228 (50-203)||(8077-8230)
scaffold0228 (50-203)||(15659-15812)
scaffold0228 (50-203)||(25611-25764)
[»] scaffold0210 (2 HSPs)
scaffold0210 (41-203)||(4702-4864)
scaffold0210 (41-128)||(5793-5879)
[»] scaffold0040 (2 HSPs)
scaffold0040 (60-198)||(64503-64640)
scaffold0040 (60-201)||(65962-66104)
[»] scaffold0725 (2 HSPs)
scaffold0725 (140-199)||(3913-3972)
scaffold0725 (140-199)||(4955-5016)
[»] scaffold0227 (2 HSPs)
scaffold0227 (60-198)||(24857-24995)
scaffold0227 (140-197)||(23685-23743)
[»] scaffold0246 (3 HSPs)
scaffold0246 (41-126)||(15947-16031)
scaffold0246 (66-202)||(17381-17516)
scaffold0246 (151-200)||(15870-15919)
[»] scaffold0769 (1 HSPs)
scaffold0769 (166-207)||(4176-4217)
[»] scaffold0136 (2 HSPs)
scaffold0136 (140-201)||(35596-35657)
scaffold0136 (141-203)||(636-698)
[»] scaffold0289 (1 HSPs)
scaffold0289 (152-199)||(9919-9966)
[»] scaffold0933 (1 HSPs)
scaffold0933 (140-198)||(2717-2775)
[»] scaffold0129 (1 HSPs)
scaffold0129 (141-198)||(37389-37447)
[»] scaffold0014 (2 HSPs)
scaffold0014 (145-201)||(227366-227423)
scaffold0014 (140-198)||(228585-228645)
[»] scaffold0095 (1 HSPs)
scaffold0095 (140-204)||(10349-10413)
[»] scaffold0450 (1 HSPs)
scaffold0450 (168-203)||(7854-7889)
[»] scaffold1571 (1 HSPs)
scaffold1571 (60-113)||(130-183)
[»] scaffold1147 (1 HSPs)
scaffold1147 (60-113)||(2545-2598)
[»] scaffold0039 (1 HSPs)
scaffold0039 (140-181)||(110427-110468)
[»] scaffold0032 (1 HSPs)
scaffold0032 (166-199)||(91049-91082)
[»] scaffold0384 (1 HSPs)
scaffold0384 (166-198)||(4452-4484)
[»] scaffold0291 (1 HSPs)
scaffold0291 (52-128)||(20910-20985)
[»] scaffold0142 (1 HSPs)
scaffold0142 (166-198)||(34851-34883)
[»] scaffold0112 (1 HSPs)
scaffold0112 (60-112)||(36147-36199)
[»] scaffold0093 (3 HSPs)
scaffold0093 (60-112)||(2745-2797)
scaffold0093 (60-112)||(7368-7420)
scaffold0093 (60-128)||(8967-9034)
[»] scaffold0031 (1 HSPs)
scaffold0031 (166-198)||(1827-1859)
[»] scaffold0010 (1 HSPs)
scaffold0010 (166-198)||(26308-26340)


Alignment Details
Target: chr1 (Bit Score: 94; Significance: 5e-46; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 41 - 199
Target Start/End: Complemental strand, 14625526 - 14625369
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||           |    
T  14625526 catgtaggcgccacatcatagattctgctgagtcacagggctcagagggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaatt 14625428  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  14625427 ttacagggggcaaaaccaaaagtgtcctatattacagggggtaaagacctattaaccct 14625369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 9441715 - 9441566
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           |||||||||     
T  9441715 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaattttttacagggg 9441617  T
Q  150 gcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    |||||||||||||| || ||||||||| ||||||||||| |||||||||||    
T  9441616 gcaaaaccaaaagtgtcttatattacaggggggtaaagacctattaaccct 9441566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 50 - 202
Target Start/End: Original strand, 9442899 - 9443051
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           |||||| ||     
T  9442899 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaattttttttacaaggg 9442997  T
Q  150 gcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaaa 202  Q
    ||||||||||||||   |||||||||| ||||||||||| ||||||||||||||    
T  9442998 gcaaaaccaaaagtgctctatattacaggggggtaaagacctattaaccctaaa 9443051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 14626676 - 14626837
Alignment:
Q  38 tgtcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnn 137  Q
    |||||||| || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||             
T  14626676 tgtcatgtaggtgccatatcatagattctgctgagtcacggggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaa 14626774  T
Q  138 nntttacagggagcaaaaccaaaagtatcctatattacagggg-gtaaagatctattaaccct 199  Q
      ||||||||  ||||||||||||||  ||||||||||||||| ||||||| |||||||||||    
T  14626775 aatttacaggaggcaaaaccaaaagtgccctatattacaggggagtaaagacctattaaccct 14626837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 52084735 - 52084884
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||| |||||||||           |||||||||     
T  52084735 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttta-ttttacaaggacggaatctaaaaaaaaaattttacagggg 52084833  T
Q  150 gcaaaaccaaaagtatcctatattaca--gggggtaaagatctattaaccc 198  Q
     |||||||||||||   ||||||||||  ||||||||||| ||||||||||    
T  52084834 acaaaaccaaaagtgctctatattacagggggggtaaagacctattaaccc 52084884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 37194400 - 37194547
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| | ||||||||| |||||||||           |||| ||||     
T  37194400 gccacatcatagattctgctgagtcacggggctca-ggggcaatcttgaagaatcttta-ttttacaaggacggaatctaaaaaaaaaaatttagagggg 37194497  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    | |||||||||| | ||||||||||||||| |||||| ||||||||||||    
T  37194498 gaaaaaccaaaaatgtcctatattacagggagtaaagttctattaaccct 37194547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 13917181 - 13917327
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||            ||||||||     
T  13917181 gccacatcatggattctgctgagtcacagggctcaggaggcaatcttgaagaatcttta-ttttacaaggacggaatctaaaaataaaaa-ttacagggg 13917278  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
      |||||||||||| |||||||||||||||| ||||  |||||||||||    
T  13917279 agaaaaccaaaagtgtcctatattacaggggataaaactctattaaccc 13917327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 52083697 - 52083636
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52083697 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaa-aatcttcatttt 52083636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 201
Target Start/End: Original strand, 23322510 - 23322670
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||||| ||||||||||||||||  ||||| || |||||||| ||||||||||||| ||||||||| |||||||||                
T  23322510 catgtaggtgccacatcaaagattctgctgagtcaatgggcttagagggcaatcgtgaagaatcttca-ttttacaaggacggaatctaaaaaaaaataa 23322608  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaa 201  Q
    |||||||| ||||||||||||||   |||||||||| ||||||||||| |||||||||||||    
T  23322609 ttacagggggcaaaaccaaaagtgctctatattacaggggggtaaagacctattaaccctaa 23322670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 60 - 203
Target Start/End: Complemental strand, 43635970 - 43635830
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaa 159  Q
    ||||||||||||||||  ||||| ||||| ||||| ||||||||||||||||| ||||| ||| |||||           |||| |||| ||||||||||    
T  43635970 agattctgctgagtcaatgggcttaggggtcaatcgtgaagaatcttcatttt-acaaggacgaaatctaattttttt--tttaaagggggcaaaaccaa 43635874  T
Q  160 aagtatcctatattacagggggtaaagatctattaaccctaaaa 203  Q
    ||||  |||||||||||||||||||||| |||||||||||||||    
T  43635873 aagtgccctatattacagggggtaaagacctattaaccctaaaa 43635830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 13916236 - 13916161
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| | ||||||||| |||||||||    
T  13916236 cacatcatagattgtgctgagtcacagcgctcagtgggcaatcttgaagaatcttta-ttttacaaggacggaatct 13916161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 200
Target Start/End: Complemental strand, 23321420 - 23321261
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||| | ||||||||| ||||||  ||||| | ||||||||| ||||||||||||| ||||||||| |||||||||           |    
T  23321420 catgtaggtgccacattaaagattctgcagagtcaatgggcttaaggggcaatcgtgaagaatcttca-ttttacaaggacggaatctaatttttttttt 23321322  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagg-gggtaaagatctattaacccta 200  Q
    ||||| || ||||||||||||||  ||||||||||||| || |||||||||||||||||||    
T  23321321 ttacatggggcaaaaccaaaagtgccctatattacaggaggataaagatctattaacccta 23321261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 196
Target Start/End: Complemental strand, 2273647 - 2273503
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||| ||||||||||||||||  ||||| |||| |||||| ||||||||||||| ||||||||| |||||||||           ||||||| |     
T  2273647 gccacatcaaagattctgctgagtcaatgggcttagggagcaatcgtgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaaatttacagagg 2273549  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaac 196  Q
    || |||| ||||||  |||||||||||||||||||||| ||||||||    
T  2273548 gc-aaacaaaaagtgccctatattacagggggtaaagacctattaac 2273503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 8930267 - 8930404
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaa 159  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| | ||||||||| ||| |||||           |||||||||  |||||||||    
T  8930267 agattctgctgagtcataggggtcagggggcaatcctgaagaatcttta-ttttacaaggacgaaatct-aatttttttttttacaggggacaaaaccaa 8930364  T
Q  160 aagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||| | ||||||||||||||||||  ||||||||||||    
T  8930365 aagtaccttatattacagggggtaaaactctattaaccct 8930404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 5561017 - 5560942
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||| | ||||||||| |||||||||    
T  5561017 cacatcaaagattctgctgagtcacagagcatagggggcaatcttgaagaatcttta-ttttacaaggacggaatct 5560942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 26097026 - 26097093
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaatcta 207  Q
    ||||||||  ||||||||||||||  |||||||||||||||||||||| ||||||||||| |||||||    
T  26097026 tttacaggaggcaaaaccaaaagtgacctatattacagggggtaaagacctattaacccttaaatcta 26097093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 27547473 - 27547403
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaac 121  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||| ||||||||||||    
T  27547473 gccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttca-ttttacaagaac 27547403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 6077087 - 6077025
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||| |||||||||||||||||    
T  6077087 gccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcatttt 6077025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 13903380 - 13903429
Alignment:
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  13903380 gcaaaaccaaaagtgacctatattacagggggtaaagatctattaaccct 13903429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 1825352 - 1825296
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaac 196  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||| ||||||||    
T  1825352 tttacagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaac 1825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 26095872 - 26095812
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||| ||||||||| ||||  |||||||||||||||||||||| ||||||||||||    
T  26095872 tttacagggggcaaaaccataagtgacctatattacagggggtaaagacctattaacccta 26095812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 8928872 - 8928809
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||||| |||||| |||||||  | |||||||||||||||||||| ||||||||||||||||    
T  8928872 ttacagggggcaaaatcaaaagtgccttatattacagggggtaaagacctattaaccctaaaat 8928809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 47146367 - 47146425
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattac-agggggtaaagatctattaacc 197  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||| |||||||||    
T  47146367 tttacagggagcaaaaccaaaagtgacctatattacaagggggtaaagacctattaacc 47146425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 16785779 - 16785718
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaa 202  Q
    |||||||| ||||||||||||||  |||| ||||||||||||||||  ||||||||||||||    
T  16785779 ttacagggggcaaaaccaaaagtgacctacattacagggggtaaaggcctattaaccctaaa 16785718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 31648585 - 31648642
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacc 197  Q
    |||||||||  ||||||||||| || ||||||||||||||||||||| ||||||||||    
T  31648585 tttacaggggacaaaaccaaaaataacctatattacagggggtaaaggtctattaacc 31648642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 38742390 - 38742439
Alignment:
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  38742390 gcaaaatcaaaagtaccctatattacagggggtaaagctctattaaccct 38742439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 37193623 - 37193563
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||| |||||||||| |||||||| ||  ||||||||||||||||||||||| |||||    
T  37193623 cacatcaaagattctgctcagtcacagtgcatagggggcaatcttgaagaatctttatttt 37193563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 44311254 - 44311202
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||| ||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  44311254 aaaagcaaaagtgtcctatattacagggggtaaaggcctattaaccctaaaat 44311202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 51903390 - 51903450
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||| |||||||| ||||||||    
T  51903390 cacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatattcatttt 51903450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 2274563 - 2274649
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| || ||| ||||| |||||||||||||| |  ||||| ||||| ||||| ||||||||||||| ||||||||| |||||||||    
T  2274563 catgtaggtgcctcatcaaagattctgctgagttaatgggcttaggggacaatcgtgaagaatcttca-ttttacaaggacggaatct 2274649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 32131903 - 32131962
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||| || |||||||| |||||  |||||||||||||||||||||| ||||||||||||    
T  32131903 ttacaaggggcaaaaccgaaagtgacctatattacagggggtaaagacctattaacccta 32131962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 51470187 - 51470124
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaa 203  Q
    ||||||| | ||||||||||||||  | |||||||||||||||||||| |||||||||| ||||    
T  51470187 tttacagagggcaaaaccaaaagtgacttatattacagggggtaaagacctattaacccaaaaa 51470124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 14978709 - 14978767
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||| || |||||||||||||| |||||||| |||||||||||||  |||||||||||    
T  14978709 ttacaaggggcaaaaccaaaagtgtcctatataacagggggtaaaggcctattaaccct 14978767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 33645071 - 33645009
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaa 203  Q
    ||||| || |||||| |||||||  |||||||||||||||||||||||||| |||||| ||||    
T  33645071 ttacaaggggcaaaatcaaaagtgacctatattacagggggtaaagatctaataacccaaaaa 33645009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 33667631 - 33667692
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggg-gtaaagatctattaacccta 200  Q
    ||||||||| ||||||||||||||  ||||||||||||||| ||||||  ||||||||||||    
T  33667631 tttacagggggcaaaaccaaaagtgacctatattacaggggtgtaaaggcctattaacccta 33667692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 13902122 - 13902066
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacc 197  Q
    |||||||| |||||||||||| |  ||||||||||||| |||||||| |||||||||    
T  13902122 ttacagggggcaaaaccaaaactgccctatattacaggtggtaaagacctattaacc 13902066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 30536504 - 30536437
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    |||||||| ||||||| |||| ||||| ||||||| ||||||||||| | ||||||||| |||||||||    
T  30536504 agattctgatgagtcatagggatcaggaggcaatcatgaagaatcttta-ttttacaaggacggaatct 30536437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 44200385 - 44200325
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||| | |||||||||| |  ||||||||||| |||||||||| ||||||||||||    
T  44200385 tttacagggtggaaaaccaaaaatggcctatattacaaggggtaaagacctattaacccta 44200325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 22591326 - 22591275
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaa 203  Q
    ||||||||||||  ||||||||||| |||||||||  |||||||||||||||    
T  22591326 aaaaccaaaagtgacctatattacaaggggtaaaggcctattaaccctaaaa 22591275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 24963002 - 24963061
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||| |||| ||||| || ||||||||||||||||||||   |||||||||||    
T  24963002 tttacagggaggaaaatcaaaaataacctatattacagggggtaaaagcctattaaccct 24963061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 38741533 - 38741470
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaa 203  Q
    ||||||||| |||||||||||||| || ||||||||||||| ||||    ||||||||||||||    
T  38741533 tttacagggggcaaaaccaaaagtgtcttatattacaggggttaaaacattattaaccctaaaa 38741470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Original strand, 9439427 - 9439461
Alignment:
Q  166 cctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||||||||||||||| ||||||||||||    
T  9439427 cctatattacagggggtaaagacctattaacccta 9439461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Complemental strand, 24987640 - 24987606
Alignment:
Q  166 cctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||||||||||||||| ||||||||||||    
T  24987640 cctatattacagggggtaaagacctattaacccta 24987606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 25600988 - 25600926
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaaccctaaa 202  Q
    |||||||| | ||||||||||||  |||||||| ||| |||||||||| ||||||||||||||    
T  25600988 ttacaggggggaaaaccaaaagtgacctatattgcagaggggtaaagacctattaaccctaaa 25600926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 27265936 - 27265973
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  27265936 cctatattacagggggtaaa-atctattaaccctaaaat 27265973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Original strand, 28797386 - 28797420
Alignment:
Q  166 cctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||||||||||||||||| |||||||||||    
T  28797386 cctatattacagggggtaaagatttattaacccta 28797420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 40373522 - 40373564
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaa 92  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||    
T  40373522 gccacatcatagattatgctgagtcacagagctcagagggcaa 40373564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 44311342 - 44311277
Alignment:
Q  62 attctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    |||||||||| ||| ||||| | |||||||||||||||||||||| | ||||||| | |||||||||    
T  44311342 attctgctgattcaaagggcacggggggcaatcttgaagaatcttta-ttttacatggacggaatct 44311277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 2472422 - 2472385
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaa 203  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  2472422 cctatattacaggggttaaagacctattaaccctaaaa 2472385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 18458827 - 18458860
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  18458827 cctatattacagggggtaaagacctattaaccct 18458860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 25235806 - 25235773
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  25235806 cctatattacagggggtaaagacctattaaccct 25235773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 47022094 - 47022127
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  47022094 cctatattacagggggtaaagacctattaaccct 47022127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 51809814 - 51809769
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaa 185  Q
    ||||||||| | |||||||||| || ||||||||||||||||||||    
T  51809814 tttacagggggaaaaaccaaaaataacctatattacagggggtaaa 51809769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 1826433 - 1826497
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaaaa 203  Q
    ||||||||| |||||| |||||||  ||||||||||| ||||||||| |  ||||||||||||||    
T  1826433 tttacagggggcaaaatcaaaagtgacctatattacaggggggtaaaaacatattaaccctaaaa 1826497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 7112748 - 7112784
Alignment:
Q  168 tatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  7112748 tatattacagggggtaaagacctattaaccttaaaat 7112784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 8928953 - 8928886
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| ||||||||||  ||||| |||||| | |  ||||||||||||| |||||||||||||||||||    
T  8928953 agattttgctgagtcaatgggcttagggggtagttgtgaagaatcttca-ttttacaagaacggaatct 8928886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 10028002 - 10028034
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  10028002 cctatattacagggggtaaagacctattaaccc 10028034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 15336421 - 15336369
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||||||| |  |||||||||||||||||||||| ||||||| || |||||    
T  15336421 aaaaccaaaaatgacctatattacagggggtaaagacctattaatccaaaaat 15336369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 22604687 - 22604723
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaa 202  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  22604687 cctatattacaggggttaaagacctattaaccctaaa 22604723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 24004578 - 24004514
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacaggggg-taaagatctattaaccctaaaa 203  Q
    ||||||||||| ||||| |||| |  |||||||||||||||| |||||| | |||||||||||||    
T  24004578 tttacagggaggaaaacaaaaaatgacctatattacagggggttaaagaaccattaaccctaaaa 24004514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 24730115 - 24730051
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaaccctaaaa 203  Q
    ||||||||||| |||||||||| |  |||||||||||| |||||||||  | |||||||||||||    
T  24730115 tttacagggagaaaaaccaaaaatgacctatattacaggggggtaaagcaccattaaccctaaaa 24730051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 30659435 - 30659471
Alignment:
Q  168 tatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||||||||||||||||| |||||||||| |||||    
T  30659435 tatattacagggggtaaagacctattaacccgaaaat 30659471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 32130691 - 32130639
Alignment:
Q  152 aaaaccaaaagtatcctatattac-agggggtaaagatctattaaccctaaaa 203  Q
    ||||||||||||  |||||||||| |||||||||||  |||||||||||||||    
T  32130691 aaaaccaaaagtgacctatattactagggggtaaaggcctattaaccctaaaa 32130639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 35168019 - 35168067
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||| |  |||||||||||||||||||||  ||||||||||||    
T  35168019 aaaaccaaaaatgacctatattacagggggtaaagcactattaacccta 35168067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 37268960 - 37268893
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||||||| |||||| |||| | ||||||||||| |||||||| || | ||||| |||||||||||||    
T  37268960 agattctgcagagtcataggggtgagggggcaatcctgaagaattttta-ttttataagaacggaatct 37268893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 10615431 - 10615276
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           |    
T  10615431 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaaat 10615333  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacc 197  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||| |||||||||    
T  10615332 ttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 10615276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 10616672 - 10616832
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct--nnnnnnnnnn 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||                
T  10616672 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaatttttttt 10616770  T
Q  139 ntttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
     ||||||||| ||||||||||||||  ||||||||||| ||||||||||| |||||||||||    
T  10616771 ttttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 10616832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 46610156 - 46610009
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||            ||||||||     
T  46610156 gccacatcattgattctgctgagtcacagggctcagggagcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaaaattacagggg 46610058  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||||    
T  46610057 gcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 46610009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 203
Target Start/End: Original strand, 28208057 - 28208207
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagc 151  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||||||||            |||||||| |     
T  28208057 cacatcatagattctgctgagtcacaggactcagggggcaatcttgaagaatcttta-ttttacaaggacggaatctaaaaaaaaaaaattacaggg-gg 28208154  T
Q  152 aaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaaaa 203  Q
    ||||||||||||  ||||||||||| |||||||||| ||||||||||||||||    
T  28208155 aaaaccaaaagtgccctatattacaggggggtaaagctctattaaccctaaaa 28208207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 37977429 - 37977564
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaa 159  Q
    ||||||||||||||||  ||||| ||||||||||| |||||| |||||||||| ||||| |||||||||           ||||||||| ||||||||||    
T  37977429 agattctgctgagtcattgggcttagggggcaatcatgaagattcttcatttt-acaaggacggaatctaatttttt---tttacagggggcaaaaccaa 37977524  T
Q  160 aagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  37977525 aagtgtcctatattacagggggtaaagacctattaaccct 37977564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 50 - 203
Target Start/End: Original strand, 46597418 - 46597570
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||| ||| ||||| ||||||||||  ||||| ||||||||||  ||||||||||||||||| ||||| |||||||||           ||||||||      
T  46597418 gccacctcagagattatgctgagtcaatgggcttagggggcaattgtgaagaatcttcatttt-acaaggacggaatctaaattgatttttttacaggag 46597516  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaa 203  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  46597517 gcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctaaaa 46597570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 28207123 - 28207063
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28207123 cacatcatatattctgctgagtcacagggctcagggggcaatcttgaagaatctttatttt 28207063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 15086370 - 15086221
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||| ||| |||||||||| |||||  ||||| ||||||||||  ||||||||||||||||| ||||| |||||||||           |||||||||     
T  15086370 gccacctcagagattctgctaagtcaatgggcttagggggcaattgtgaagaatcttcatttt-acaaggacggaatctaaatatttttttttacagggg 15086272  T
Q  150 gcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaaccct 199  Q
    ||||||||||||||  |||||||||||| |||||||||| |||||||||||    
T  15086271 gcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 15086221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 200
Target Start/End: Complemental strand, 46596232 - 46596093
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaa 159  Q
    |||||||||||||||| |||| ||| ||||||||| ||||||||||| ||||| ||||  | |||||||           |||||| ||  |||||||||    
T  46596232 agattctgctgagtcataggggtcatggggcaatcctgaagaatctttatttt-acaatgatggaatctaagtttttttttttacatgggacaaaaccaa 46596134  T
Q  160 aagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  46596133 aagtaccctatattacagggggtaaagctctattaacccta 46596093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 48288271 - 48288348
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    |||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||| | ||||||||| |||||||||    
T  48288271 gccacatcatagattctgttgagtcacagggctcaggaggcgatcctgaagaatcttta-ttttacaaggacggaatct 48288348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 22256350 - 22256201
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||| |||||||||| |||||  || || |||||| |||| ||||||||||||| ||||||||| |||||||||           |||||||||     
T  22256350 gccacatcaaagattctgctaagtcaatggacttagggggtaatcgtgaagaatcttca-ttttacaaggacggaatctaaaaaaatagttttacagggg 22256252  T
Q  150 gcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    |||||||||||||| || ||||||||| |||||||||||  ||||||||||    
T  22256251 gcaaaaccaaaagtgtcatatattacaggggggtaaagacttattaaccct 22256201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 200
Target Start/End: Original strand, 15093633 - 15093773
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnn-tttacagggagcaaaacca 158  Q
    |||||||| ||||||| |||| ||||||||||||| ||||||||||| ||||| ||||| | |||||||            ||||||||| |||||| ||    
T  15093633 agattctgttgagtcataggggtcagggggcaatcctgaagaatctttatttt-acaaggatggaatctaaaaaaaaaaaatttacagggggcaaaatca 15093731  T
Q  159 aaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    |||||| ||||||||| ||||||||||| |||||||||||||    
T  15093732 aaagtaccctatattatagggggtaaagttctattaacccta 15093773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 43930712 - 43930772
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||    
T  43930712 cacatcatagattctgctgagtcacagaactgagggggcaatcttgaagaatctttatttt 43930772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 18140998 - 18140939
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||  |||||||||||    
T  18140998 tttacagggagcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccct 18140939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 2011872 - 2011932
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||| |||||    
T  2011872 cacatcatagattctgctgagtcatagggttcaggggacaatcctgaagaatctttatttt 2011932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 18142196 - 18142260
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||    
T  18142196 tttacagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaacccttaaat 18142260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 24528472 - 24528534
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||| |||||| || |||||    
T  24528472 gccacatcagagattctgctgagtcatagggctcaggggacaatcttaaagaatatttatttt 24528534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 27360558 - 27360496
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||||||||||| |||||||||| ||||||||||||  |||| ||||||||||| |||||    
T  27360558 gccacatcatagattttgctgagtcatagggctcaggggagaatcctgaagaatctttatttt 27360496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 54567742 - 54567800
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    |||| |||| ||||||||||||||  |||||||||||||||||||||| ||||||||||    
T  54567742 tttatagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 54567800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 24729629 - 24729693
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggg-gtaaagatctattaaccctaaaa 203  Q
    ||||||||  ||||||||||||||| ||||||||||||||| ||||||  |||||||||||||||    
T  24729629 tttacaggaggcaaaaccaaaagtaacctatattacaggggagtaaaggcctattaaccctaaaa 24729693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 48044332 - 48044276
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaac 196  Q
    ||||||||| ||||||||||||||  ||||||| |||||||||||||| ||||||||    
T  48044332 tttacagggggcaaaaccaaaagtgccctatatcacagggggtaaagacctattaac 48044276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 52396360 - 52396419
Alignment:
Q  53 acatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||| ||||| ||||||||||||||||  | ||||||||||||||||||||| |||||    
T  52396360 acatcaaagattttgctgagtcacagggcataaggggcaatcttgaagaatctttatttt 52396419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 12066277 - 12066223
Alignment:
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||| |||||||  |||||||||||||||||||| | ||||||||||||||||    
T  12066277 gcaaaatcaaaagtgacctatattacagggggtaaaaaactattaaccctaaaat 12066223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 24910940 - 24910986
Alignment:
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaac 196  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||    
T  24910940 gcaaaaccaaaagtgatctatattacagggggtaaagatctattaac 24910986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 31835841 - 31835899
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||||| |||||| ||||||| || ||||||||||||||||||||  ||||||||||    
T  31835841 ttacagggggcaaaatcaaaagtgtcatatattacagggggtaaagacatattaaccct 31835899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 34062337 - 34062399
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaa 202  Q
    ||||||||| | ||||||||||||  ||||||||||||||| ||||| || ||||||||||||    
T  34062337 tttacagggggaaaaaccaaaagtgacctatattacaggggataaaggtcaattaaccctaaa 34062399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 38843548 - 38843610
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattac-agggggtaaagatctattaaccctaa 201  Q
    ||||||||| |||||||||||||| ||||||||||| | |||||||||| |||| ||||||||    
T  38843548 tttacagggggcaaaaccaaaagtgtcctatattacaaaggggtaaagacctatcaaccctaa 38843610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 12210076 - 12210028
Alignment:
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||||||||  ||||||||||||||||||||  |||||||||||    
T  12210076 gcaaaaccaaaagtgacctatattacagggggtaaaagtctattaaccc 12210028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 27318226 - 27318166
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||||| ||||| ||||||||||||||||| | | ||||| ||||||||||| |||||    
T  27318226 cacatcatatattctactgagtcacagggctcatgagacaatcctgaagaatctttatttt 27318166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 37976028 - 37975968
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaaccct 199  Q
    |||| |||| ||||||||||||||| |||||||||||| ||||||||  ||||||||||||    
T  37976028 tttatagggggcaaaaccaaaagtaccctatattacaggggggtaaaactctattaaccct 37975968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 49872974 - 49873010
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaa 202  Q
    |||||||||||||||||||||| ||||||||||||||    
T  49872974 cctatattacagggggtaaagacctattaaccctaaa 49873010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 7248923 - 7248864
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||| |||||||||||| |   ||||||||||||||||||||  |||||||||||    
T  7248923 tttacagggggcaaaaccaaaaatgatctatattacagggggtaaaggcctattaaccct 7248864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 11761140 - 11761077
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaa 203  Q
    |||| |||||| |||||||||| |  |||||||||||||||||||||  | |||||||||||||    
T  11761140 tttatagggaggaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctaaaa 11761077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 25110060 - 25110119
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||| |||||| ||| |  |||||||||||||| ||||||| |||||||||||    
T  25110060 tttacagggaggaaaaccgaaaatgacctatattacagggtgtaaagacctattaaccct 25110119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 54012587 - 54012646
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||| |||||||||| |  |||||||||||||||||||||  | |||||||||    
T  54012587 tttacagggaggaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccct 54012646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 54566568 - 54566506
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    ||||||||  |||||||||||||  ||||||||||| ||||||||| |||||||||||| ||||    
T  54566568 ttacaggggacaaaaccaaaagtgacctatattaca-ggggtaaaggtctattaacccttaaat 54566506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 4218865 - 4218923
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatatta-cagggggtaaagatctattaacc 197  Q
    ||||||||| ||||||||||||||  ||||||||| ||||||||||||  |||||||||    
T  4218865 tttacagggggcaaaaccaaaagtgacctatattaccagggggtaaaggcctattaacc 4218923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Complemental strand, 6510247 - 6510213
Alignment:
Q  166 cctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||||||||||||||| ||||||||||||    
T  6510247 cctatattacagggggtaaagacctattaacccta 6510213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 27521579 - 27521521
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaacc 197  Q
    ||||||||| | |||||||||| || ||||||||||| ||||||||||| |||||||||    
T  27521579 tttacaggggggaaaaccaaaaataacctatattacacgggggtaaagacctattaacc 27521521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 28207041 - 28206979
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagg-gggtaaagatctattaaccctaa 201  Q
    ||||||||| | ||||||||||||  ||||||||||||| ||||||||  |||||||||||||    
T  28207041 tttacaggggggaaaaccaaaagtgccctatattacaggagggtaaagccctattaaccctaa 28206979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 29184980 - 29185038
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||  ||||||||||||||  |||||||||||||| ||||||  ||||||||||    
T  29184980 tttacaggaggcaaaaccaaaagtgacctatattacagggagtaaaggcctattaaccc 29185038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 1351478 - 1351531
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaatc 205  Q
    |||||||||| |  |||||||||||||||||||||  | |||||||||||||||    
T  1351478 aaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctaaaatc 1351531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 16386511 - 16386564
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttt 113  Q
    ||||||||||||||||  ||| | ||||| ||||| ||||||||||||||||||    
T  16386511 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcattttt 16386564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 24842958 - 24842905
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttt 113  Q
    ||||||||||||||||  ||| | ||||| ||||| ||||||||||||||||||    
T  24842958 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcattttt 24842905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 36867882 - 36867915
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||| ||||||||||||||||||||||||    
T  36867882 cctatattatagggggtaaagatctattaaccct 36867915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 47115587 - 47115624
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaa 203  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  47115587 cctatattacagggggtaaagacctattaacccaaaaa 47115624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 51460788 - 51460821
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  51460788 cctatattacagggggtaaagacctattaaccct 51460821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 2011201 - 2011141
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||| | |||||||||||||||| |||  || |||||||| ||||||||||| |||||    
T  2011201 cacatcaaatattctgctgagtcacaaggcatagagggcaatcctgaagaatctttatttt 2011141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 14826074 - 14826134
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||| ||||||||||||||  |  |||||||||||||||||   ||||||||||||    
T  14826074 tttacagggggcaaaaccaaaagtgacaaatattacagggggtaaaacactattaacccta 14826134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 18705012 - 18704952
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattac-agggggtaaagatctattaaccct 199  Q
    ||||||||| | ||||||||||||  ||||||||||  |||||||||| ||||||||||||    
T  18705012 tttacaggggggaaaaccaaaagtgccctatattactggggggtaaagctctattaaccct 18704952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 20957195 - 20957227
Alignment:
Q  167 ctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||||||||||||| |||||||||||    
T  20957195 ctatattacagggggtaaagacctattaaccct 20957227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 27315331 - 27315279
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||||||||||||  ||| ||||||||||||| |||| |||||| |||||    
T  27315331 agattctgctgagtcattgggatcagggggcaatcctgaaaaatctttatttt 27315279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 33898283 - 33898331
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||| || |||||||||||||||||||||  | ||||||||||    
T  33898283 aaaaccaaaaataacctatattacagggggtaaagcaccattaacccta 33898331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 34061402 - 34061338
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    ||||||| ||| ||||| ||||||  |||||||||||| |||||||  |||||||| ||||||||    
T  34061402 tttacagagaggaaaacaaaaagtgacctatattacagagggtaaatgtctattaatcctaaaat 34061338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 39846591 - 39846643
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||||||| |  |||||||||||||||||||||  | ||||||||||||||    
T  39846591 aaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctaaaat 39846643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 43930052 - 43929992
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||| ||||||||||||||||||  ||  |||||||| ||||||| |||||| |||||    
T  43930052 cacatcaaagattctgctgagtcacaatgcatagggggcattcttgaataatctttatttt 43929992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 45291478 - 45291434
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaa 184  Q
    |||||| || ||||||||||||||  |||||||||||||||||||    
T  45291478 tttacaaggggcaaaaccaaaagtgacctatattacagggggtaa 45291434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 49880762 - 49880794
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  49880762 cctatattacagggggtaaagacctattaaccc 49880794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 41 - 199
Target Start/End: Complemental strand, 15060320 - 15060162
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           |    
T  15060320 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaattt 15060222  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    |||||||| |||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  15060221 ttacagggggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 15060162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 41 - 200
Target Start/End: Original strand, 15061724 - 15061882
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||           |    
T  15061724 catgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaatttattttt 15061822  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  15061823 ttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccta 15061882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 199
Target Start/End: Complemental strand, 11956296 - 11956138
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           |    
T  11956296 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaatt 11956198  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    ||||||||  |||||||||||||  ||||||||||| ||||||||||| |||||||||||    
T  11956197 ttacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 11956138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 15616409 - 15616558
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           |||||||||     
T  15616409 gccagatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaatttttttttttacagggg 15616507  T
Q  150 gcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  15616508 gcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 15616558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 41 - 201
Target Start/End: Complemental strand, 41064301 - 41064141
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||           |    
T  41064301 catgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaatt 41064203  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaa 201  Q
    |||||||| ||||||||||||||  ||||||||||| ||||||||||| |||||||||||||    
T  41064202 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctaa 41064141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 41065557 - 41065715
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||           |    
T  41065557 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggaaggaatctaaaaaaaaaatt 41065655  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    ||||||||  |||||||||||||  ||||||||||| ||||||||||| |||||||||||    
T  41065656 ttacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 41065715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 21776816 - 21776964
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||           |||||||||     
T  21776816 gccacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaaatttacagggg 21776914  T
Q  150 gcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaaccc 198  Q
    ||||||||||||||  |||||||||||| |||||||||| ||||||||||    
T  21776915 gcaaaaccaaaagtgccctatattacagaggggtaaagacctattaaccc 21776964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 200
Target Start/End: Original strand, 11957549 - 11957708
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| |||||||||           |    
T  11957549 catgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcgtca-ttttacaaggacggaatctaaaaaaaaaatt 11957647  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaacccta 200  Q
    |||||||| ||||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  11957648 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaacccta 11957708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 30796726 - 30796579
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||           |||||| ||     
T  30796726 gccacatcatagattctgctgagtcacagggctcagggtgcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaaatttacaaggg 30796628  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||||||||  ||||||||| |||||||||||| ||||||||||    
T  30796627 gcaaaaccaaaagtgccctatattatagggggtaaagacctattaaccc 30796579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 200
Target Start/End: Complemental strand, 15615259 - 15615101
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||||           |    
T  15615259 catgtaggtgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttca-atttacaaggacggaatctaaaaaaaaaatt 15615161  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    |||| |||  |||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  15615160 ttaccggggacaaaaccaaaagtgccctatattacagggggtaaagacctattaacccta 15615101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 52 - 201
Target Start/End: Original strand, 30798490 - 30798638
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagc 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||            |||||||| ||    
T  30798490 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaaaattacagggggc 30798588  T
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaa 201  Q
    |||| ||| |||  |||||||||  ||||||||||| |||||||||||||    
T  30798589 aaaatcaatagtgccctatattaaggggggtaaagacctattaaccctaa 30798638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 204
Target Start/End: Complemental strand, 11438476 - 11438333
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaa 159  Q
    |||||||||||||||| |||| ||||||| ||||| ||||||||||| ||||| ||| | |||||||||           ||||||||||||||||||||    
T  11438476 agattctgctgagtcataggggtcaggggacaatcctgaagaatctttatttt-acatggacggaatctaaaaaaaaaaatttacagggagcaaaaccaa 11438378  T
Q  160 aagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||    
T  11438377 aagtaccctatattacagggggtaaagctctattaaccctaaaat 11438333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 21775618 - 21775532
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| || |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  21775618 catgtaggtgccacatcatagattctgctgagtcatagggttcagggggcaatcttgaagaatcttca-ttttacaaggacggaatct 21775532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 40434316 - 40434463
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||  |||||||| |||||||| ||||| |||||||||            ||||| |||    
T  40434316 gccacatcaaagattctgctgagtcaatgggcttagggggcaattgtgaagaat-ttcatttt-acaaggacggaatctaaaaaaaaaatattacatgga 40434413  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||||||||| |||||||||| |||||||  ||||||||||||    
T  40434414 gcaaaaccaaaagtatcttatattacagagggtaaatgtctattaaccct 40434463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 29520291 - 29520220
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||| || ||||||||||||||||||||||||||  ||||| ||||||||||| |||||||||||||||||    
T  29520291 catgtaggtgccacatcatagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcatttt 29520220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 204
Target Start/End: Original strand, 10012717 - 10012869
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||| ||||||||| ||| |||||            ||| ||||     
T  10012717 gccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttca-ttttacaaggacgaaatctaaaaaaaaata-ttatagggg 10012814  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
     |||||||||||||| |||||||||||| || |||||| |||||||||| |||||    
T  10012815 acaaaaccaaaagtaccctatattacagaggataaagacctattaacccaaaaat 10012869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 29521330 - 29521416
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| || ||||||||| ||||||||||||||||  ||||| ||| ||||||| ||||||||||||| ||||||||| |||||||||    
T  29521330 catgtaggtgccacatcaaagattctgctgagtcattgggcttaggaggcaatcgtgaagaatcttca-ttttacaaggacggaatct 29521416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 37274883 - 37274748
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaa 159  Q
    |||||||||||||||| |||  | ||||||||||| ||||||||||| | ||||||||| ||||||||             |||||||| ||||||||||    
T  37274883 agattctgctgagtcataggagttagggggcaatcctgaagaatcttta-ttttacaaggacggaatc--aaaaaaaaaaattacagggggcaaaaccaa 37274787  T
Q  160 aagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||| ||||||||| ||||||||||| |||||||||||    
T  37274786 aagtaccctatattatagggggtaaagctctattaaccc 37274748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 40434623 - 40434561
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||||| ||||||||||||||||  ||||| ||||| ||||| |||||||||||||||||    
T  40434623 gccacatcagagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcatttt 40434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 28819594 - 28819537
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacc 197  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||  |||||||||    
T  28819594 tttacagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaacc 28819537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 8367908 - 8367983
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaat 126  Q
    ||||||||| ||||||||||| ||||  | ||| ||||||||||| ||||||||||||| ||||||||| |||||||    
T  8367908 gccacatcaaagattctgctgcgtcaatgagcttagggggcaatcgtgaagaatcttca-ttttacaaggacggaat 8367983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 22551554 - 22551514
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaatct 206  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  22551554 cctatattacagggggtaaagacctattaaccctaaaatct 22551514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 35599371 - 35599307
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaaccctaaaa 203  Q
    ||||||||| ||||||||||||||  |||||||||||| ||||||||| ||||||||||| ||||    
T  35599371 tttacagggggcaaaaccaaaagtgacctatattacaggggggtaaaggtctattaacccaaaaa 35599307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 9751675 - 9751734
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||   |||||||||||    
T  9751675 tttacagggggcaaaaccaaaagtgacctatattacagggggtaaaagcctattaaccct 9751734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 38482376 - 38482317
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||| ||||||| || |  |||||||||||||||||||||| |||||||||||    
T  38482376 tttacagggaggaaaaccagaattgacctatattacagggggtaaagacctattaaccct 38482317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 12399585 - 12399643
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||| | |||||| ||| || |||||||||||||||||||||| ||||||||||    
T  12399585 tttacaggggggaaaaccgaaaataacctatattacagggggtaaagacctattaaccc 12399643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 33751049 - 33750988
Alignment:
Q  66 tgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    |||||||||| |||| ||||||||||||| ||||||||||| | ||||||||| |||||||||    
T  33751049 tgctgagtcatagggatcagggggcaatcctgaagaatcttta-ttttacaaggacggaatct 33750988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 10011676 - 10011619
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacc 197  Q
    |||| |||| |||||||||||||| |||||||||||| ||| |||||| |||||||||    
T  10011676 tttagagggggcaaaaccaaaagtgtcctatattacacgggataaagacctattaacc 10011619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 13948581 - 13948638
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacc 197  Q
    ||||||||| ||||||||||||||  ||||||||||||| |||||||  |||||||||    
T  13948581 tttacagggggcaaaaccaaaagtgccctatattacaggaggtaaaggcctattaacc 13948638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 11439709 - 11439784
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaat 126  Q
    ||||| ||| ||||||||||||||||  ||||| || |||||||  ||||||||||||| ||||||||| |||||||    
T  11439709 gccacctcagagattctgctgagtcaatgggcttagtgggcaattgtgaagaatcttca-ttttacaaggacggaat 11439784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 4060517 - 4060458
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||| || |||||||||| ||||  |||||||| ||||||||||| ||||||||||||    
T  4060517 tttacaaggggcaaaaccaagagtactctatattagagggggtaaagctctattaaccct 4060458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 10976772 - 10976815
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaatctaaa 209  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||    
T  10976772 cctatattacagggggtaaagacctattaaccctataatttaaa 10976815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 11890099 - 11890161
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||||| ||||||||||||||  ||||||||||| |||||||||  |||||||||| |||||    
T  11890099 ttacagggggcaaaaccaaaagtgacctatattaca-ggggtaaaggcctattaacccaaaaat 11890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 33052849 - 33052811
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaat 204  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  33052849 cctatattacaaggggtaaagacctattaaccctaaaat 33052811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 889114 - 889065
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaa 201  Q
    ||||||||| ||  ||||||||||| |||||||||| |||||||||||||    
T  889114 aaaaccaaatgtggcctatattacaaggggtaaagacctattaaccctaa 889065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 5802473 - 5802416
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacc 197  Q
    ||||||||| | ||||||| || |  |||||||| |||||||||||||||||||||||    
T  5802473 tttacagggggaaaaaccagaaatgacctatattgcagggggtaaagatctattaacc 5802416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 9750506 - 9750445
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattac-agggggtaaagatctattaacccta 200  Q
    |||||||||  |||||||||||||  |||||||||| |||||||||||  ||||||||||||    
T  9750506 tttacaggggacaaaaccaaaagtgacctatattacaagggggtaaaggcctattaacccta 9750445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 15395589 - 15395540
Alignment:
Q  153 aaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaa 202  Q
    |||||||||||  ||||| |||||||||||||| | ||||||||||||||    
T  15395589 aaaccaaaagtgacctattttacagggggtaaaaacctattaaccctaaa 15395540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 29104476 - 29104443
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  29104476 cctatattacagggggtaaagacctattaaccct 29104443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 29520182 - 29520136
Alignment:
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||||||||| |||||||||||  || |||||||||||||||||    
T  29520182 gcaaaaccaaaagtaccctatattaca--ggataaagatctattaaccc 29520136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 11439806 - 11439858
Alignment:
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaa 202  Q
    ||||||||||||||   |||||||||||| | |||||| ||||||||||||||    
T  11439806 gcaaaaccaaaagtgctctatattacaggagataaagacctattaaccctaaa 11439858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 19601265 - 19601325
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    ||||||||  ||||||||||||||  ||||||||||| ||||||||||  |||||||||||    
T  19601265 tttacaggatgcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccct 19601325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 26888456 - 26888516
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||| ||||||||||||||  ||||||||| || |||||||   ||||||||||||    
T  26888456 tttacagggggcaaaaccaaaagtgacctatattatagagggtaaaacactattaacccta 26888516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 40434123 - 40434057
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    |||||||||||| ||| || |||| |||||||||| ||||||||||| | ||||||||| |||||||||    
T  40434123 agattctgctgactcaaagagctc-gggggcaatcctgaagaatcttta-ttttacaaggacggaatct 40434057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 41 - 199
Target Start/End: Complemental strand, 20962350 - 20962193
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||           |    
T  20962350 catgtaggcgccacatcatagattctgctgagtcacagggctcaggaggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaattt 20962252  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  20962251 ttacagggggcaaaaccaaaagtgccatatattacagggggtaaagatctattaaccct 20962193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 29248389 - 29248241
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           ||||||| |     
T  29248389 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaataaatttacagcgg 29248291  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    | |||||||||||| ||||||||||||||||||||||| |||||||||||    
T  29248290 gtaaaaccaaaagtgtcctatattacagggggtaaagacctattaaccct 29248241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 41 - 200
Target Start/End: Complemental strand, 34740045 - 34739886
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           |    
T  34740045 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaattttt 34739947  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaacccta 200  Q
    ||||||||  |||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  34739946 ttacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaacccta 34739886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 41 - 203
Target Start/End: Original strand, 34741294 - 34741456
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||           |    
T  34741294 catgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaatt 34741392  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaaaa 203  Q
    |||||||| ||||||||||||||  ||||||||||| ||||||||||| ||||||| |||||||    
T  34741393 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaagcctaaaa 34741456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 29249610 - 29249768
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| |||||           |    
T  29249610 catgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttta-ttttacaaggacgaaatctaaaaaaaaaaat 29249708  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    |||||||| ||||||||||||||  ||||||||||| ||||||||||| |||||||||||    
T  29249709 ttacagggggcaaaaccaaaagttccctatattacaggggggtaaagacctattaaccct 29249768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 41 - 198
Target Start/End: Original strand, 20963600 - 20963757
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||           |    
T  20963600 catgtaggtgccacatcatagattctgctgagtcacagggctcaggggacaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaaat 20963698  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccc 198  Q
    |||||||| ||||| ||||||||  ||||||||||| ||||||||||| ||||||||||    
T  20963699 ttacagggggcaaagccaaaagtgccctatattacaggggggtaaagacctattaaccc 20963757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 198
Target Start/End: Original strand, 12566850 - 12566996
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||           ||||||||| ||    
T  12566850 cacatcatagattcagctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacagaatctaagaaacaaattttacagggggc 12566948  T
Q  152 aaaaccaaaagtatcctatattac-agggggtaaagatctattaaccc 198  Q
    ||||||||||||  |||||||||| |||||||||||| ||||||||||    
T  12566949 aaaaccaaaagtgccctatattacaagggggtaaagacctattaaccc 12566996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 50881324 - 50881480
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||||| ||||||||||||||||  ||||| | ||||||||| ||||||||||||||||| ||||  |||||||||           |    
T  50881324 catgtaggtgccacatcaaagattctgctgagtcaatgggcttaaggggcaatcgtgaagaatcttcatttt-acaatgacggaatctaatttttttt-t 50881421  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  50881422 ttacagggggcaaaaccaaaagtggcctatattacagggggtaaagacctattaaccct 50881480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 46427158 - 46427218
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  46427158 cacatcatagattctgctgagtcacagggctcagggggcaatcttgatgaatctttatttt 46427218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 200
Target Start/End: Complemental strand, 50880053 - 50879907
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagc 151  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||| | |||||| || |||||||||            ||| |||||||    
T  50880053 cacatcatagattctgctgagtcacaaggctcagggggcaatcctgaaaaatcttta-ttttaccaggacggaatctaaaaaaaaaaa-ttagagggagc 50879956  T
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||||||  |||||||||||||  ||||||| ||||||||||||    
T  50879955 aaaaccaaaagtggcctatattacaggaagtaaagacctattaacccta 50879907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 200
Target Start/End: Original strand, 43537752 - 43537895
Alignment:
Q  55 atcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaa 154  Q
    ||||||||||||||||||||| | |||||||||||||||| |||||||| || | ||||| ||| |||||||||            |||||||| | |||    
T  43537752 atcatagattctgctgagtcatatggctcagggggcaatcctgaagaattttta-ttttagaaggacggaatctaaaaaaaaaaa-ttacaggggggaaa 43537849  T
Q  155 accaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||||||||||||| ||| ||||||| ||| |||||||||    
T  43537850 accaaaagtatcctatattagaggaggtaaagctcttttaacccta 43537895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 55499407 - 55499321
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| || ||||||||| ||||||||||||||||  ||||| ||||||||||| |||| |||||||| ||||||||| |||||||||    
T  55499407 catgtaggtgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttca-ttttacaaggacggaatct 55499321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 51752812 - 51752686
Alignment:
Q  68 ctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaaaagtatcc 167  Q
    ||||||||  ||||| | ||||||||| ||||||||||||||||| ||||| |||||||||           ||||||||| |||||| ||||||| ||     
T  51752812 ctgagtcaatgggcttatggggcaatcgtgaagaatcttcatttt-acaaggacggaatctaatttattttttttacagggggcaaaatcaaaagtgtca 51752714  T
Q  168 tatattacagggggtaaagatctattaa 195  Q
    |||||||||||||||||||| |||||||    
T  51752713 tatattacagggggtaaagacctattaa 51752686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 54554440 - 54554382
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  54554440 ttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 54554382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 201
Target Start/End: Original strand, 55500305 - 55500466
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct-nnnnnnnnnnn 139  Q
    ||||| || ||||||||| |||||||||| |||||  ||||| ||||||||||| ||||||||||||| ||||||| | | |||||||                
T  55500305 catgtaggtgccacatcaaagattctgcttagtcaacgggcttagggggcaatcgtgaagaatcttca-ttttacagggatggaatctaaaaaaaataaa 55500403  T
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaa 201  Q
     |||||||| |||||||||||| | |||||||||||| ||||||||||| |||||||||||||    
T  55500404 attacagggggcaaaaccaaaaatgtcctatattacaggggggtaaagacctattaaccctaa 55500466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 43537596 - 43537521
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||||| |||||||||||||||||| |||  ||||||||||| ||||||||||| | ||||||||| |||||||||    
T  43537596 cacatcaaagattctgctgagtcacaaggcatagggggcaatcctgaagaatcttta-ttttacaaggacggaatct 43537521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 51754210 - 51754258
Alignment:
Q  151 caaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  51754210 caaaaccaaaagtaccctatattacagggggtaaagctctattaaccct 51754258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 34027193 - 34027251
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||    
T  34027193 tttacagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccc 34027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 21994384 - 21994328
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacc 197  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  21994384 ttacaggggacaaaatcaaaagtgtcctatattacagggggtaaagacctattaacc 21994328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 202
Target Start/End: Original strand, 40479442 - 40479577
Alignment:
Q  66 tgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaaaagtat 165  Q
    ||||||||||  ||||| ||||||||||| ||||||||||||| ||||||||| ||||||| |            |||||| |  ||||||||||||||     
T  40479442 tgctgagtcattgggcttagggggcaatcgtgaagaatcttca-ttttacaaggacggaatttaaaaaaaaaaaattacagaggacaaaaccaaaagtac 40479540  T
Q  166 cctatattacagggggtaaagatctattaaccctaaa 202  Q
    |||||||||||| || ||| || ||||||||||||||    
T  40479541 cctatattacagaggataatgacctattaaccctaaa 40479577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 17695972 - 17696034
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaaa 202  Q
    |||||||| |||||||||||||| || ||||||||| ||||||||||  ||||||||||||||    
T  17695972 ttacagggggcaaaaccaaaagtgtcttatattacaggggggtaaaggactattaaccctaaa 17696034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 34025972 - 34025911
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaa 201  Q
    ||||||||| ||||||||||||||  ||||||||||| |||||||||| ||||||||||||||    
T  34025972 tttacaggg-gcaaaaccaaaagtgacctatattacaagggggtaaaggtctattaaccctaa 34025911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 54555350 - 54555408
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||| ||||||||||||||  | ||||||||||||||||||||  |||||||||    
T  54555350 tttacagggggcaaaaccaaaagtgccatatattacagggggtaaagacttattaaccc 54555408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 11862026 - 11862087
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaa 202  Q
    |||||||| |||||||||||||| | ||||||||||  ||||||||  ||||||||||||||    
T  11862026 ttacagggggcaaaaccaaaagtgttctatattacaaagggtaaaggcctattaaccctaaa 11862087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 2438389 - 2438337
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||| |||||    
T  2438389 agattctgctgagtcataggggtcagggagcaatcctgaagaatctttatttt 2438337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 11861951 - 11861891
Alignment:
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaatctaaaa 210  Q
    ||||||||||||||   ||||||||||||||||||||  | |||||||||||||| |||||    
T  11861951 gcaaaaccaaaagtgctctatattacagggggtaaaggcccattaaccctaaaatttaaaa 11861891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 43860923 - 43860971
Alignment:
Q  151 caaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||  ||||||||||||| |||||||| |||||||||||    
T  43860923 caaaaccaaaagtgccctatattacaggaggtaaagacctattaaccct 43860971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 49629681 - 49629634
Alignment:
Q  151 caaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  49629681 caaaaccaaaagtgtcctat-ttacagggggtaaaggtctattaaccct 49629634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 14183669 - 14183610
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||| ||||||||||||||||  ||||||||| ||||||||||   |||||||||||    
T  14183669 tttacagagagcaaaaccaaaagtgccctatattagagggggtaaaacactattaaccct 14183610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 51164020 - 51164075
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaac 196  Q
    |||||||| ||||||||||||||  ||||||||| |||||||||||  ||||||||    
T  51164020 ttacagggggcaaaaccaaaagtgacctatattatagggggtaaaggcctattaac 51164075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 550731 - 550673
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    |||||| || ||||||| |||| |  |||||||||||||||||||||| ||||||||||    
T  550731 tttacaaggggcaaaactaaaaatgacctatattacagggggtaaagacctattaaccc 550673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 6439243 - 6439181
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaa 202  Q
    ||||||||| | |||||| ||| |  |||||||||||||||||||||  ||||||||||||||    
T  6439243 tttacagggtgtaaaaccgaaaatgacctatattacagggggtaaagcactattaaccctaaa 6439181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Original strand, 11563542 - 11563576
Alignment:
Q  166 cctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||||||||||||||| ||||||||||||    
T  11563542 cctatattacagggggtaaagacctattaacccta 11563576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Original strand, 37273420 - 37273454
Alignment:
Q  166 cctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||||||||||||||| ||||||||||||    
T  37273420 cctatattacagggggtaaagacctattaacccta 37273454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 40450316 - 40450254
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaa 202  Q
    ||||||||||| ||||| |||| || ||||||||||||||||||||   | ||||||||||||    
T  40450316 tttacagggaggaaaacaaaaaataacctatattacagggggtaaaacaccattaaccctaaa 40450254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 44198656 - 44198610
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaag 186  Q
    |||||| |||||||||||||||||   ||||||||||||||||||||    
T  44198656 tttacatggagcaaaaccaaaagtggtctatattacagggggtaaag 44198610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 50138546 - 50138488
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||| | |||||| ||| |  |||||||||||||||||||||| ||||||||||    
T  50138546 tttacagggggaaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 50138488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 7533727 - 7533674
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttt 113  Q
    ||||||||||||||||  ||| | ||||| ||||| ||||||||||||||||||    
T  7533727 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcattttt 7533674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 13032945 - 13032900
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaa 185  Q
    ||||||||||| |||||||||| |  ||||||||||||||||||||    
T  13032945 tttacagggaggaaaaccaaaaatgacctatattacagggggtaaa 13032900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 20125443 - 20125476
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  20125443 cctatattacagggggtaaagacctattaaccct 20125476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 21780154 - 21780121
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  21780154 cctatattacagggggtaaagacctattaaccct 21780121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 24215766 - 24215799
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  24215766 cctatattacagggggtaaagacctattaaccct 24215799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 35539805 - 35539842
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaa 203  Q
    |||||||||||||||||||| | |||||||||||||||    
T  35539805 cctatattacagggggtaaatacctattaaccctaaaa 35539842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 37600951 - 37600875
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatc 127  Q
    ||||||||| |||||||||||||||| ||| || || || ||||| | ||||||||| | ||||||||| ||||||||    
T  37600951 gccacatcagagattctgctgagtcataggacttagaggccaatcctaaagaatcttta-ttttacaaggacggaatc 37600875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 41331815 - 41331766
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaa 201  Q
    ||||||||||||  |||||||| |||||| |||||| |||||||||||||    
T  41331815 aaaaccaaaagtgacctatattgcaggggataaagacctattaaccctaa 41331766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 9001475 - 9001439
Alignment:
Q  167 ctatattacagggggtaaagatctattaaccctaaaa 203  Q
    ||||||||||||||||||| | |||||||||||||||    
T  9001475 ctatattacagggggtaaaaacctattaaccctaaaa 9001439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 9410137 - 9410085
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||||||||||| |||| ||||||||||||  |||||||| || |||||    
T  9410137 agattctgctgagtcataggggtcagggggcaatactgaagaatatttatttt 9410085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 12352470 - 12352514
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaac 196  Q
    ||||||||||||  |||||||||||||||||||||  ||||||||    
T  12352470 aaaaccaaaagtgacctatattacagggggtaaaggcctattaac 12352514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 20613024 - 20612964
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||| | ||||||||||||  |||||||| ||||||||||||  ||||||| ||||    
T  20613024 tttacaggggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaatccta 20612964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 50727622 - 50727586
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaa 202  Q
    |||||||||||||||||||| | ||||||||||||||    
T  50727622 cctatattacagggggtaaaaacctattaaccctaaa 50727586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 50735636 - 50735600
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaa 202  Q
    |||||||||||||||||||| | ||||||||||||||    
T  50735636 cctatattacagggggtaaaaacctattaaccctaaa 50735600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 51754118 - 51754185
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| || ||||||| |||| ||| ||||||||| ||||||||||| | ||||||||| |||||||||    
T  51754118 agattttgttgagtcatagggatcatggggcaatcctgaagaatcttta-ttttacaaggacggaatct 51754185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 201
Target Start/End: Complemental strand, 17763484 - 17763333
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           |||||||||     
T  17763484 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaattttacagggg 17763386  T
Q  150 gcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaaccctaa 201  Q
    |||||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  17763385 gcaaaaccaaaagtgtcctatattacagaggggtaaagacctattaaccctaa 17763333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 41 - 203
Target Start/End: Original strand, 17764600 - 17764762
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           |    
T  17764600 catgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaatttttt 17764698  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaaccctaaaa 203  Q
    |||||||| ||||||||||||||  |||||||||||| || ||||||| |||||||||| ||||    
T  17764699 ttacagggggcaaaaccaaaagtgccctatattacagtggagtaaagacctattaacccaaaaa 17764762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 48170162 - 48170248
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  48170162 catgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatct 48170248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 50 - 202
Target Start/End: Complemental strand, 1830959 - 1830808
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||| | ||||||||  |||||||||           |||||| ||     
T  1830959 gccacaccatagattctgctaagtcacagggctcagggagcaatcttgaagaatcttta-ttttacaaagacggaatctaaaaaaaaaaatttacaaggg 1830861  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaa 202  Q
    | |||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  1830860 ggaaaatcaaaagtatcctatattacagggggtaaagccctattaaccctaaa 1830808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 199
Target Start/End: Complemental strand, 34158203 - 34158057
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagc 151  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||| |||||||||           ||| ||||| ||    
T  34158203 cacatcatagattctgctgagtcacagggatctgggggcaatcttgaagaatcttca-ttttacaaggacggaatct-aatttttttttttncagggggc 34158106  T
Q  152 aaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    ||||||||||||  ||||||||||| ||||||||||| |||||||||||    
T  34158105 aaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 34158057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 9554160 - 9554318
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||||||||||| ||||||||||  ||||| ||||||||||| ||||||||||||| ||||||||| |||||||||           |    
T  9554160 catgtaggtgccacatcatagattatgctgagtcaatgggcttagggggcaatcgtgaagaatcttca-ttttacaaggacggaatctaatttttttttt 9554258  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagg-gggtaaagatctattaaccct 199  Q
    |||||||| ||||||||||||||  ||||||||||||| |||||||||| ||||||||||    
T  9554259 ttacagggggcaaaaccaaaagtgccctatattacaggagggtaaagatttattaaccct 9554318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 199
Target Start/End: Original strand, 1831892 - 1832037
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagc 151  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |  ||||||           ||||||||| |     
T  1831892 cacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatcttta-ttttacaaggatagaatctaaaaaaaaaaatttacaggg-gg 1831989  T
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||| |||||||  |||||||||||||||||||||  |||||||||||    
T  1831990 aaaatcaaaagtgccctatattacagggggtaaagccctattaaccct 1832037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 48168971 - 48168915
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48168971 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatgttca 48168915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 199
Target Start/End: Complemental strand, 9553546 - 9553399
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnn-tttacagggag 150  Q
    ||||||| ||||| |||||||| |  ||||| ||||||||||| ||||||||||||||||| ||||| |||||||||            ||||||||  |    
T  9553546 cacatcaaagattatgctgagttattgggcttagggggcaatcgtgaagaatcttcatttt-acaaggacggaatctaaaaaaaaataatttacaggagg 9553448  T
Q  151 caaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||    
T  9553447 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 9553399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 11056880 - 11056803
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| ||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  11056880 gccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttca-ttttacaaggacggaatct 11056803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 25776406 - 25776492
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| || ||||||||| ||||||||||||||||  ||||| ||||||||||  |||||||| |||| ||||||||| |||||||||    
T  25776406 catgtaggtgccacatcaaagattctgctgagtcaatgggcttagggggcaattgtgaagaattttca-ttttacaaggacggaatct 25776492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 48168908 - 48168849
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||| ||||||||||||||  |||||||||||| ||||||||| |||||||||||    
T  48168908 tttacagggggcaaaaccaaaagtgccctatattacagagggtaaagacctattaaccct 48168849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 1594133 - 1594182
Alignment:
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  1594133 gcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccct 1594182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 13772551 - 13772612
Alignment:
Q  52 cacatcatagattctgctga-gtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||| ||||||||||| ||||||| |||||||||| |||||||||||||||| |||||    
T  13772551 cacatcattgattctgctgaagtcacagagctcagggggtaatcttgaagaatctttatttt 13772612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 35891144 - 35891092
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| |||||    
T  35891144 agattctgctgagtcataggggtcagggggcaatcctgaagaatctttatttt 35891092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 33757456 - 33757409
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||| |||||||  ||||||||||||||||||||||||||||||||||    
T  33757456 aaaatcaaaagtgacctatattacagggggtaaagatctattaaccct 33757409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 8174942 - 8174877
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaatc 205  Q
    ||||||||  |||||||||||| |  |||||||||||||||||||||| |||||| ||| ||||||    
T  8174942 tttacaggatgcaaaaccaaaaatgccctatattacagggggtaaagacctattagcccaaaaatc 8174877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 13771706 - 13771646
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||| |||||||||||||||| || ||  | ||||||||||||||||||||| |||||    
T  13771706 cacatcaaagattctgctgagtcatagtgcatatggggcaatcttgaagaatctttatttt 13771646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 13772973 - 13773029
Alignment:
Q  152 aaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaaaatcta 207  Q
    ||||| |||||| |||||||||||| |||||||||| |||||||||||| |||||||    
T  13772973 aaaactaaaagtgtcctatattacaagggggtaaagctctattaacccttaaatcta 13773029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 23161147 - 23161099
Alignment:
Q  152 aaaaccaaaagtatcctatattacagg-gggtaaagatctattaaccct 199  Q
    ||||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  23161147 aaaaccaaaagtaacctatattacaggagggtaaagacctattaaccct 23161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 24436305 - 24436372
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    |||||||||||||||| | || ||||||||||||| ||| ||||||| | ||||||||| |||||||||    
T  24436305 agattctgctgagtcatatgggtcagggggcaatcctgaggaatcttta-ttttacaaggacggaatct 24436372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 44568880 - 44568844
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaa 202  Q
    |||||||||||||||||||||||||||||||| ||||    
T  44568880 cctatattacagggggtaaagatctattaaccttaaa 44568844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 47637853 - 47637801
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||| ||||||| |||| ||||||||||||| ||||||||||| |||||    
T  47637853 agattctgatgagtcataggggtcagggggcaatcatgaagaatctttatttt 47637801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 8175970 - 8176029
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggg-gtaaagatctattaaccct 199  Q
    |||||||| ||||||||||||||| | ||||||||||||| |||||  ||||||||||||    
T  8175970 ttacagggggcaaaaccaaaagtaccttatattacaggggagtaaaactctattaaccct 8176029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 13279416 - 13279479
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaa 203  Q
    ||||||||| | |||||| ||| |  |||||||||||||||||||||| |||||||||| ||||    
T  13279416 tttacagggggaaaaaccgaaaatgacctatattacagggggtaaagacctattaacccaaaaa 13279479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 19272460 - 19272507
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||| |  |||||||||||||||||||||| |||||||||||    
T  19272460 aaaaccaaaaatgacctatattacagggggtaaagacctattaaccct 19272507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 42509037 - 42509096
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||| ||||||||||||||  |||||||||||| |||||||   |||||||||||    
T  42509037 tttacagggggcaaaaccaaaagtgccctatattacagagggtaaaacactattaaccct 42509096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 11058169 - 11058234
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca--gggggtaaagatctattaaccctaaaa 203  Q
    ||||||||  ||||||||||||||| |||||||||||  |||||||||  |||| |||||||||||    
T  11058169 tttacaggaggcaaaaccaaaagtaccctatattacagggggggtaaaactctagtaaccctaaaa 11058234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 23784616 - 23784578
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  23784616 cctatattacagggggtaaagacctattaacccttaaat 23784578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 48896527 - 48896481
Alignment:
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaac 196  Q
    ||||||||||||||  ||||||||||||| |||||||| ||||||||    
T  48896527 gcaaaaccaaaagtgacctatattacaggaggtaaagacctattaac 48896481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 1492818 - 1492753
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaaaatc 205  Q
    |||||||| | |||||||||| |  ||||||||||| ||||||||||  |||||||||||||||||    
T  1492818 ttacaggggggaaaaccaaaaatgacctatattacaagggggtaaagcactattaaccctaaaatc 1492753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 1589444 - 1589403
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacaggggg 181  Q
    ||||||||| ||||||||||||||  ||||||||||||||||    
T  1589444 tttacagggggcaaaaccaaaagtgacctatattacaggggg 1589403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 6269560 - 6269527
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  6269560 cctatattacagggggtaaagacctattaaccct 6269527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 9915683 - 9915650
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  9915683 cctatattacagggggtaaagacctattaaccct 9915650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 9923595 - 9923562
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  9923595 cctatattacagggggtaaagacctattaaccct 9923562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 14554447 - 14554508
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaa 201  Q
    ||||||||| | ||||| |||| |  |||||||||||||||||||||  |||||||||||||    
T  14554447 tttacaggggggaaaacaaaaaatgacctatattacagggggtaaaggcctattaaccctaa 14554508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 35891067 - 35891010
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    |||||| | ||||| ||||||||| | ||||||||||||||||||  |||||||||||    
T  35891067 ttacagagggcaaatccaaaagtaccttatattacagggggtaaaactctattaaccc 35891010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 35913310 - 35913343
Alignment:
Q  167 ctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||||||||||||||| ||||||||||||    
T  35913310 ctatattacagggggtaaagacctattaacccta 35913343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 38193219 - 38193256
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaa 203  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  38193219 cctatattacagggggtaaagacctattaacccaaaaa 38193256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 5219035 - 5219095
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    ||||||||| |||||| |||||||  ||||||||||| ||||||||||  |||||||||||    
T  5219035 tttacagggggcaaaatcaaaagtgacctatattacaggggggtaaaggcctattaaccct 5219095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 13286864 - 13286928
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaaaa 203  Q
    ||||||||| | ||||||| || |  ||||||||||| ||||||||||| |||||||||||||||    
T  13286864 tttacaggggggaaaaccagaaatgacctatattacaagggggtaaagacctattaaccctaaaa 13286928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 23371481 - 23371449
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  23371481 cctatattacagggggtaaagacctattaaccc 23371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 39580191 - 39580223
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  39580191 cctatattacagggggtaaagacctattaaccc 39580223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 47160553 - 47160493
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacaggggg-taaagatctattaaccct 199  Q
    |||| ||||| |||||| ||||||| |||||||||||||||| |||||| | |||||||||    
T  47160553 tttatagggaacaaaactaaaagtaacctatattacagggggctaaagacccattaaccct 47160493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 41 - 200
Target Start/End: Complemental strand, 1903087 - 1902928
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           |    
T  1903087 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaatt 1902989  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaacccta 200  Q
    |||||||| ||||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  1902988 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaacccta 1902928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 51 - 200
Target Start/End: Original strand, 38937419 - 38937567
Alignment:
Q  51 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggag 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           |||| |||| |    
T  38937419 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaattttttttttttataggggg 38937517  T
Q  151 caaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  38937518 caaaaccaaaagtgccctatattacagggggtaaagacctattaacccta 38937567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 41 - 201
Target Start/End: Original strand, 1904309 - 1904469
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||           |    
T  1904309 catgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaattttttt 1904407  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaa 201  Q
    | |||||| ||||||||||||||  ||||||||||| ||||||||||| |||||||||||||    
T  1904408 tcacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctaa 1904469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 44367027 - 44366867
Alignment:
Q  38 tgtcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnn 137  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||             
T  44367027 tgtcatgtaggtgccacatcatagattctgctgagtcacagagctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaa 44366929  T
Q  138 nntttacagggagcaaaaccaaaagtatcctatattacaggg-ggtaaagatctattaaccc 198  Q
      ||||||||| ||||||||||||||  |||||||||||||| | |||||| ||||||||||    
T  44366928 aatttacagggggcaaaaccaaaagtgccctatattacagggagttaaagacctattaaccc 44366867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 38936091 - 38935945
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           ||||||| |     
T  38936091 gccacatcattgattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaatttttttttttacagtgg 38935993  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  38935992 gcaaaaccaaaagtgtcctatattaca-ggggtaaagacctattaaccc 38935945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 7576481 - 7576325
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| |||||||||           |    
T  7576481 catgtaggtgccacatcatagattctgctgagtcacatggctca-ggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaatatt 7576384  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacaggggg-taaagatctattaaccc 198  Q
    |||||||| ||||||||||||||  |||||||||||||||| |||||| ||||||||||    
T  7576383 ttacagggggcaaaaccaaaagtgccctatattacagggggataaagacctattaaccc 7576325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 50 - 203
Target Start/End: Original strand, 38815003 - 38815155
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           ||||||| |     
T  38815003 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatct-aaattttttttttacagagg 38815100  T
Q  150 gcaaaaccaaaagtatcctatattacagggg-gtaaagatctattaaccctaaaa 203  Q
    ||||||||||||||  | ||||||||||||| ||||||| |||||||||| ||||    
T  38815101 gcaaaaccaaaagtgccttatattacaggggagtaaagacctattaacccaaaaa 38815155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 53 - 200
Target Start/End: Original strand, 38876934 - 38877080
Alignment:
Q  53 acatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagca 152  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| |||||||||           |||||||| || |    
T  38876934 acatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttta-ttttacaaggacggaatctaaaaaaaaaaatttacaggaagga 38877032  T
Q  153 aaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||||  | |||||||||||||||||||  ||||||||||||    
T  38877033 aaaccaaaagtgccttatattacagggggtaaagccctattaacccta 38877080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 38937076 - 38937000
Alignment:
Q  51 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  38937076 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatct 38937000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 7577693 - 7577835
Alignment:
Q  57 catagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaac 156  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||| |||||||||           ||||||||| | |||||    
T  7577693 catagattctgctgagtcacaaggctcagggggcaatcttgatgaatcttca-ttttacaaggacggaatctaaaaaaaaaaatttacagggggtaaaac 7577791  T
Q  157 caaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    |||||||  ||||||||||| ||||||||||| |||||||||||    
T  7577792 caaaagtgccctatattacaggggggtaaagacctattaaccct 7577835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 21904072 - 21903995
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  21904072 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttta-ttttacaaggacggaatct 21903995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 38876135 - 38876006
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct-nnnnnnnnnnntttacagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||            ||||||||| |    
T  38876135 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttta-ttttacaaggacggaatctaaaaaaaaaaaatttacaggggg 38876037  T
Q  151 caaaaccaaaagtatcctatattacaggggg 181  Q
     |||||||||||| |||||||||||||||||    
T  38876036 aaaaaccaaaagtgtcctatattacaggggg 38876006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 38813732 - 38813646
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| |||||||||    
T  38813732 catgtaggtgccacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatattca-ttttacaaggacggaatct 38813646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 16670655 - 16670500
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||||| ||||||||||||||||  | ||| ||||||||||| ||||||||||||||||| ||||  |||||||||                
T  16670655 catgtaggtgccacatcaaagattctgctgagtcaatgagcttagggggcaatcgtgaagaatcttcatttt-acaatgacggaatctaaaaaaaaaaaa 16670557  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacc 197  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||| |||||||||    
T  16670556 ttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 16670500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 199
Target Start/End: Complemental strand, 23834738 - 23834580
Alignment:
Q  40 tcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnn 139  Q
    |||||| || ||||||||| ||||||||||||||||  ||||| ||||| ||||| ||||||||||||| ||||||||| |||||||||               
T  23834738 tcatgtaggtgccacatcaaagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaaa 23834640  T
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
     |||||||| ||||||||||||||  ||||||||||| ||||||||||| |||||||||||    
T  23834639 -ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 23834580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 11101239 - 11101165
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||  |||| |||||||||    
T  11101239 cacatcatagattctgctgagtcacaacgctcagggggcaatcttgaagaatctttatttt--caaggacggaatct 11101165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 16671704 - 16671790
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| || ||||||||| ||||||||||||||||  | ||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  16671704 catgtaggtgccacatcaaagattctgctgagtcaatgagcttagggggcaatcgtgaagaatcttca-ttttacaagaacggaatct 16671790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 15747809 - 15747744
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaatc 205  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||| |||||||||||| |||||    
T  15747809 tttacagggaacaaaaccaaaagtgacctatattacagggggtaaaggtctattaacccttaaatc 15747744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 5970666 - 5970810
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||| ||| ||||||||||||||||  ||||| ||||| ||||| ||||||||||||||||| |||||||||||||||           |||||||  |    
T  5970666 gccacctcagagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcatttt-acaagaacggaatctaaatttcttt-tttacagaaa 5970763  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
     |||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  5970764 -caaaaccaaaagtaccctatattaca-ggggtaaagacctattaaccc 5970810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 199
Target Start/End: Complemental strand, 36565381 - 36565235
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagc 151  Q
    ||||||| ||||||||||||||| || |||  | ||||||||| ||||||||||| | ||||||||| |||||||||           |||||||||||     
T  36565381 cacatcaaagattctgctgagtcccaaggcatatggggcaatcctgaagaatcttta-ttttacaaggacggaatctaaaataaaaaatttacagggagg 36565283  T
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||| |  ||||||||||||  ||||| ||||||||||||    
T  36565282 aaaaccaaaagtgttttatattacagggaataaagctctattaaccct 36565235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 44368294 - 44368371
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||||||| ||||||||||||||||| ||| | ||||||||||| ||||||||||||| || |||||| |||||||||    
T  44368294 gccacatcaaagattctgctgagtcactgggtttagggggcaatcgtgaagaatcttca-ttatacaaggacggaatct 44368371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 23835674 - 23835830
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||||| |||||| |||||||||  ||||| ||| | | ||| ||||||||||||||||| ||||| ||||||||            |    
T  23835674 catgtaggtgccacatcaaagattccgctgagtcaatgggcttaggagacgatcgtgaagaatcttcatttt-acaaggacggaatc-gatttttttttt 23835771  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||||| ||||||| ||||||  |||||||||||||||||||||| |||||||||||    
T  23835772 ttacagggggcaaaactaaaagtgccctatattacagggggtaaagacctattaaccct 23835830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 198
Target Start/End: Complemental strand, 5969878 - 5969725
Alignment:
Q  48 gcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnn----ttta 143  Q
    ||||||||| | |||||||||||||||| |||| ||||||| ||||| | ||||||||| ||||| ||||| |||||||||               ||||    
T  5969878 gcgccacataagagattctgctgagtcataggggtcaggggacaatcattaagaatctttatttt-acaaggacggaatctaaaaaaaaaaaaaaattta 5969780  T
Q  144 cagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||  ||||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  5969779 caggaggcaaaaccaaaagtaccctatattacaggggataaagctctattaaccc 5969725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 18249776 - 18249716
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||| |||||||||||||||||    
T  18249776 cacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcatttt 18249716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 31552050 - 31551903
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagc 151  Q
    |||||||||||||||||||||||||| |||||||||||||| | |||| ||| ||   ||||||||| |||||||||              ||||||||     
T  31552050 cacatcatagattctgctgagtcacaaggctcagggggcaaacatgaaaaatttt--attttacaaggacggaatctaaaaaaaaaa----acagggagg 31551957  T
Q  152 aaaaccaaaagtatcctatattac-agggggtaaagatctattaaccctaaaat 204  Q
    ||||||||||||   ||||||||| ||||||||||| |||||||||||||||||    
T  31551956 aaaaccaaaagtgctctatattacaagggggtaaagctctattaaccctaaaat 31551903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 18250790 - 18250948
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||| ||||| ||||||||||||||||  ||||| ||||  ||||| ||||||||||||| ||||||||| |||||||||                
T  18250790 catgtaggtgccgcatcaaagattctgctgagtcaatgggcttagggaacaatcgtgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaaaa 18250888  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    |||||||  |||||||||||| |  ||||||||||| ||||||||||| |||||||||||    
T  18250889 ttacaggaggcaaaaccaaaaatgccctatattacaggggggtaaagacctattaaccct 18250948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 28141745 - 28141691
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaa 195  Q
    |||||||| | ||||||||||||  ||||||||||||||||||||||||||||||    
T  28141745 ttacagggtgtaaaaccaaaagtgacctatattacagggggtaaagatctattaa 28141691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 41306029 - 41305952
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||||||| ||||||||||||||||  ||| | ||||||||||| ||||||| ||||| ||||||||| |||||||||    
T  41306029 gccacatcagagattctgctgagtcaatgggtttagggggcaatcgtgaagaagcttca-ttttacaaggacggaatct 41305952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 34635738 - 34635697
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaatcta 207  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  34635738 cctatattacagggggtaaagacctattaaccctaaaatcta 34635697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 16577359 - 16577410
Alignment:
Q  153 aaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||| || || |||||||||||||||||||||| ||||||||||||||||    
T  16577359 aaaccagaaataacctatattacagggggtaaagacctattaaccctaaaat 16577410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 203
Target Start/End: Original strand, 38625162 - 38625197
Alignment:
Q  168 tatattacagggggtaaagatctattaaccctaaaa 203  Q
    ||||||||||||||||||||||||||||||||||||    
T  38625162 tatattacagggggtaaagatctattaaccctaaaa 38625197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 19686183 - 19686237
Alignment:
Q  145 agggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||| ||||||||||||||  |||||||||||||||||||||  |||||||||||    
T  19686183 agggggcaaaaccaaaagtgccctatattacagggggtaaagcactattaaccct 19686237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 22468223 - 22468284
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaacccta 200  Q
    ||||||||| ||||||||||||||  ||||||||||| ||||||||||  ||||||||||||    
T  22468223 tttacagggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaacccta 22468284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 22474444 - 22474505
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaacccta 200  Q
    ||||||||| ||||||||||||||  ||||||||||| ||||||||||  ||||||||||||    
T  22474444 tttacagggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaacccta 22474505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 28462492 - 28462552
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacaggggg-taaagatctattaaccct 199  Q
    ||||||||| ||||||||||||||  |||||||||||||||| |||||  |||||||||||    
T  28462492 tttacagggtgcaaaaccaaaagtgacctatattacagggggataaaggcctattaaccct 28462552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 30371443 - 30371383
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||| | |||||||||| |  |||||||||||||| ||||||| ||||||||||||    
T  30371443 tttacaggggggaaaaccaaaaatgacctatattacagggagtaaagacctattaacccta 30371383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 39150282 - 39150223
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaa 201  Q
    |||||||| |||||||||||||  |||||||||||||||||||| |  |||||||||||||    
T  39150282 ttacaggg-gcaaaaccaaaagagtcctatattacagggggtaatgcactattaaccctaa 39150223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 44242354 - 44242418
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    ||||||||| ||||||||||||||   |||||||||||| |||||||  |||||||||| |||||    
T  44242354 tttacagggggcaaaaccaaaagtgatctatattacaggaggtaaaggcctattaacccaaaaat 44242418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 30371621 - 30371664
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaatctaaa 209  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||    
T  30371621 cctatattacagggggtaaagacctattaactctaaaatgtaaa 30371664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 8238046 - 8237988
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    |||||||| |||||||||||||| | |||||||||| ||||||||   |||||||||||    
T  8238046 ttacagggggcaaaaccaaaagtgttctatattacatggggtaaaacactattaaccct 8237988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Original strand, 19493473 - 19493507
Alignment:
Q  166 cctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||||||||||||||| ||||||||||||    
T  19493473 cctatattacagggggtaaagacctattaacccta 19493507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 19684261 - 19684215
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaag 186  Q
    |||||||||  ||||||||||||| || |||||||||||||||||||    
T  19684261 tttacaggggacaaaaccaaaagtgtcatatattacagggggtaaag 19684215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Complemental strand, 22116187 - 22116153
Alignment:
Q  166 cctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||||||||||||||| ||||||||||||    
T  22116187 cctatattacagggggtaaagacctattaacccta 22116153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 22467040 - 22466982
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaacc 197  Q
    |||||||||  |||||||||||||  |||||||||||| |||||||||| |||||||||    
T  22467040 tttacaggggacaaaaccaaaagtgacctatattacaggggggtaaagacctattaacc 22466982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 29835134 - 29835096
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  29835134 cctatattacagggggtaaagacctattaacccaaaaat 29835096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 41307057 - 41307119
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||| ||| ||||||||||||  || ||||||| ||||||||||||||||||| || |||||    
T  41307057 gccacgtcagagattctgctgacccaaagggctcggggggcaatcttgaagaatatttatttt 41307119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 17328124 - 17328091
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  17328124 cctatattacagggggtaaagacctattaaccct 17328091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 28461125 - 28461065
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaa 201  Q
    |||||||||  |||||||||||| | |||||||||||||||||||||   ||||||||||||    
T  28461125 tttacaggggccaaaaccaaaagga-cctatattacagggggtaaaggcttattaaccctaa 28461065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 28484591 - 28484652
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaa 201  Q
    ||||||||| | |||||||||| |  |||||||||||||| ||||||| ||||||| |||||    
T  28484591 tttacagggcggaaaaccaaaaatgacctatattacagggagtaaagacctattaatcctaa 28484652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 10355232 - 10355292
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||| ||||| |||||||||| |||||  ||||| ||||| ||||||||||| |||||    
T  10355232 cacatcaaagattatgctgagtcatagggcataggggacaatcctgaagaatctttatttt 10355292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 11102077 - 11102137
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||| ||||| ||||||||||||| ||  | ||| ||||||||||||||||| |||||    
T  11102077 cacatcaaagattatgctgagtcacagtgcatatgggacaatcttgaagaatctttatttt 11102137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 18555834 - 18555870
Alignment:
Q  168 tatattacagggggtaaagatctattaaccctaaaat 204  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  18555834 tatattacaggggataaagacctattaaccctaaaat 18555870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 19641478 - 19641446
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  19641478 cctatattacagggggtaaagacctattaaccc 19641446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 19840071 - 19840039
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  19840071 cctatattacagggggtaaagacctattaaccc 19840039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 22292616 - 22292564
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||||| | |||  ||||| ||||||||||| |||||||||||||||||    
T  22292616 agattctgctcaatcaatgggcttagggggcaatcgtgaagaatcttcatttt 22292564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 22293460 - 22293516
Alignment:
Q  56 tcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||||||||||| ||| ||||||  |||||||||  ||||||||||| |||||    
T  22293460 tcatagattctgctgactcaaagggcttggggggcaatactgaagaatctttatttt 22293516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 32845661 - 32845725
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    ||||||||| | ||||| |||| |  |||||||||||||||||||||  | ||||||||||||||    
T  32845661 tttacaggggggaaaacaaaaaatgacctatattacagggggtaaagcaccattaaccctaaaat 32845725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 33441550 - 33441502
Alignment:
Q  153 aaaccaaaagtatcctatattacagggggtaaagatctattaaccctaa 201  Q
    ||||||||| || |||||||||||||||||||||  | |||||||||||    
T  33441550 aaaccaaaaataacctatattacagggggtaaagcaccattaaccctaa 33441502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 37147583 - 37147551
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  37147583 cctatattacagggggtaaagacctattaaccc 37147551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 38386170 - 38386218
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||| || ||||||||||||||| ||||||  |||||||||||    
T  38386170 aaaaccaaaaataacctatattacaggggataaagacatattaacccta 38386218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 41 - 201
Target Start/End: Original strand, 39809987 - 39810147
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           |    
T  39809987 catgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaataat 39810085  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaa 201  Q
    |||||||| ||||||||||||||  ||||||||||| ||||||||||| |||||||||||||    
T  39810086 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctaa 39810147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 27164559 - 27164714
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||           |    
T  27164559 catgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaatt 27164657  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacc 197  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||| |||||||||    
T  27164658 ttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 27164714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 199
Target Start/End: Complemental strand, 27163273 - 27163115
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           |    
T  27163273 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaattttt 27163175  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    ||||||||  |||||||||||||  ||||||||||| ||||||||||| |||||||||||    
T  27163174 ttacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 27163115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 39808795 - 39808649
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||           |||||||||     
T  39808795 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacagaatctaaatttttttttttacagggg 39808697  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||||||||  ||||||||||| |||||||||| ||||||||||    
T  39808696 gcaaaaccaaaagtgccctatattaca-ggggtaaagacctattaaccc 39808649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 199
Target Start/End: Original strand, 42350076 - 42350236
Alignment:
Q  39 gtcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnn 138  Q
    ||||||| || |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||| ||||||||| |||||||||              
T  42350076 gtcatgtaggtgccacatcatagattctgctaagtcacagagctcagtgggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaa 42350174  T
Q  139 ntttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
     ||||||||| |||||||||||| |   |||||||||| ||||||||||| |||||||||||    
T  42350175 atttacagggggcaaaaccaaaaatgctctatattacaggggggtaaagacctattaaccct 42350236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 42349108 - 42348961
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| ||||||| |            ||||||||     
T  42349108 gccacatcatagattctgctgagtcacagggttcaggggacaatcttgaagaatcttca-ttttacaaggacggaat-ttaaaaagaaaaattacagggg 42349011  T
Q  150 gcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccc 198  Q
    ||||||||||||||  ||||||||||| ||||||||||| ||||||||||    
T  42349010 gcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccc 42348961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 28574684 - 28574624
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  28574684 cacatcatagattctgctgagtcacagggttcagggggcaatcttgaagaatctttatttt 28574624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 5704439 - 5704502
Alignment:
Q  49 cgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  5704439 cgccacatcatagatactgctgagtcacagggctcagggggtaatcttgaagaatctttatttt 5704502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 200
Target Start/End: Complemental strand, 1601827 - 1601671
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||| |||||| || ||||||| |           |    
T  1601827 catgtaggtgccacatcaaagattctgctgagtcactgggcttagggggcaatcgtgaagaatcttca-ttttactaggacggaattt---aattttttt 1601732  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaacccta 200  Q
    ||| |||| ||||||||||||||  |||||||||||| ||||||||| |||||||||||||    
T  1601731 ttatagggggcaaaaccaaaagtgccctatattacagaggggtaaaggtctattaacccta 1601671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 1601164 - 1601240
Alignment:
Q  51 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  1601164 ccacatcaaagattctgctgagtcactgggcttagggggcaatcgtgaagaatcttca-ttttacaaggacggaatct 1601240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 1600222 - 1600077
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||| ||||||||||||||||    ||| ||||||||||| ||||||||||||||||| | ||| |||||||||           |||| ||||     
T  1600222 gccacatcaaagattctgctgagtcaattagcttagggggcaatcgtgaagaatcttcatttt-ataaggacggaatctaattttttt--tttatagggg 1600126  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||||||||  | |||||||||||||||||||| ||||||||||    
T  1600125 gcaaaaccaaaagtggcttatattacagggggtaaagacctattaaccc 1600077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 1602808 - 1602885
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||||||| ||||||||||||||||| ||| | ||||||||||| ||||||||||||| || |||||| |||||||||    
T  1602808 gccacatcaaagattctgctgagtcactgggtttagggggcaatcgtgaagaatcttca-ttatacaaggacggaatct 1602885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 2270290 - 2270348
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||| ||||||||||||||  |||||| ||||||||||||||| ||||||||||    
T  2270290 tttacagggggcaaaaccaaaagtgacctataatacagggggtaaagacctattaaccc 2270348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 28561579 - 28561435
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct-nnnnnnnnnnntttacagggag 150  Q
    ||||||||||| |||| |||||||||||||||| | ||||||||||||||||| | | ||||||||| || ||||||            ||||||||| |    
T  28561579 cacatcatagactctgttgagtcacagggctcaagcggcaatcttgaagaatcctta-ttttacaaggacagaatctaaaaaaaaatactttacaggg-g 28561482  T
Q  151 caaaaccaaaagtatcctatattacagggggtaaagatctattaacc 197  Q
      |||||||||||  ||||||||||||||||||||| ||||||||||    
T  28561481 ggaaaccaaaagtgccctatattacagggggtaaagctctattaacc 28561435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 28567077 - 28566933
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct-nnnnnnnnnnntttacagggag 150  Q
    ||||||||||| |||| |||||||||||||||| | ||||||||||||||||| | | ||||||||| || ||||||            ||||||||| |    
T  28567077 cacatcatagactctgttgagtcacagggctcaagcggcaatcttgaagaatcctta-ttttacaaggacagaatctaaaaaaaaatactttacaggg-g 28566980  T
Q  151 caaaaccaaaagtatcctatattacagggggtaaagatctattaacc 197  Q
      |||||||||||  ||||||||||||||||||||| ||||||||||    
T  28566979 ggaaaccaaaagtgccctatattacagggggtaaagctctattaacc 28566933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 128
Target Start/End: Original strand, 28561931 - 28562006
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||||| ||||||||||||||||||| ||  ||| | ||||||||||||||||| | ||||||||| |||||||||    
T  28561931 cacatcaaagattctgctgagtcacagtgcataggtgacaatcttgaagaatcttta-ttttacaaggacggaatct 28562006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 128
Target Start/End: Original strand, 28567429 - 28567504
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||||| ||||||||||||||||||| ||  ||| | ||||||||||||||||| | ||||||||| |||||||||    
T  28567429 cacatcaaagattctgctgagtcacagtgcataggtgacaatcttgaagaatcttta-ttttacaaggacggaatct 28567504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 39513925 - 39513865
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||   ||||||||||||    
T  39513925 tttacagggggcaaaaccaaaagtgacctatattacagggggtaaatgcctattaacccta 39513865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 14329599 - 14329658
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||| |||||| ||| |  |||||||||||||||||||||| |||||||||||    
T  14329599 tttacagggaggaaaaccgaaaatgacctatattacagggggtaaagacctattaaccct 14329658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 40702009 - 40702068
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||||  |||||||||||    
T  40702009 tttacagggggcaaaacgaaaagtgacctatattacagggggtaaaggcctattaaccct 40702068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 6105693 - 6105555
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct-nnnnnnnnnnntttacagggagcaaaacca 158  Q
    ||||| || ||||||| || | ||||||||||||| ||||||||||| | ||||||||| |||||||||            |||||||||||||||||||    
T  6105693 agattatgttgagtcatagaggtcagggggcaatcctgaagaatcttta-ttttacaagtacggaatctaaaaaaatatattttacagggagcaaaacca 6105595  T
Q  159 aaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||| ||||||||| || ||||||||   ||||||||||    
T  6105594 aaagtgtcctatattgcacggggtaaaacactattaaccc 6105555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 12330391 - 12330330
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaa 201  Q
    ||||||||| | ||||| | || || |||||||||||||||||||||| |||||||||||||    
T  12330391 tttacagggggaaaaactagaaataacctatattacagggggtaaagacctattaaccctaa 12330330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 28575027 - 28575084
Alignment:
Q  55 atcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||| ||||||||||||||||||| ||  || |||||||||||||||||||| |||||    
T  28575027 atcaaagattctgctgagtcacagtgcatagtgggcaatcttgaagaatctttatttt 28575084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 31985065 - 31985008
Alignment:
Q  145 agggagcaaaaccaaaagtatcctatattacaggg-ggtaaagatctattaaccctaa 201  Q
    |||| ||||||||||||||  |||||||||||||| |||||||| |||||||||||||    
T  31985065 agggggcaaaaccaaaagtgacctatattacagggaggtaaagacctattaaccctaa 31985008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 34901560 - 34901515
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaa 185  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||    
T  34901560 tttacagggggcaaaaccaaaagtgacctatattacagggggtaaa 34901515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 34985347 - 34985384
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaa 203  Q
    |||||||||||||||||||||| |||||||||||||||    
T  34985347 cctatattacagggggtaaagacctattaaccctaaaa 34985384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 3252308 - 3252248
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||| ||||||| ||||||||  ||||| ||||||||||| ||||||||||| |||||    
T  3252308 cacatcagagattctactgagtcaatgggcttagggggcaatcgtgaagaatctttatttt 3252248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 27987552 - 27987588
Alignment:
Q  167 ctatattacagggggtaaagatctattaaccctaaaa 203  Q
    ||||||||||||||||||||| |||||||||||||||    
T  27987552 ctatattacagggggtaaagacctattaaccctaaaa 27987588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 28044854 - 28044890
Alignment:
Q  167 ctatattacagggggtaaagatctattaaccctaaaa 203  Q
    ||||||||||||||||||||| |||||||||||||||    
T  28044854 ctatattacagggggtaaagacctattaaccctaaaa 28044890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 39451563 - 39451499
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    ||||||||||| |||||||||| |  | ||||||| |||||||||| | ||||||||||||||||    
T  39451563 tttacagggaggaaaaccaaaaatgacttatattagagggggtaaaaacctattaaccctaaaat 39451499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 199
Target Start/End: Original strand, 12330590 - 12330621
Alignment:
Q  168 tatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||||||||||||||||||||||||    
T  12330590 tatattacagggggtaaagatctattaaccct 12330621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 29309597 - 29309559
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  29309597 cctatattacagggggtaaagacctattaacccttaaat 29309559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 16432748 - 16432695
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttt 113  Q
    ||||||||||||||||  ||| | ||||| ||||| ||||||||||||||||||    
T  16432748 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcattttt 16432695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 25277731 - 25277764
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  25277731 cctatattacagggggtaaagacctattaaccct 25277764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 27543650 - 27543687
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaa 203  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  27543650 cctatattacagggggtaaagacctattaacccaaaaa 27543687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 31986227 - 31986287
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca--gggggtaaagatctattaaccc 198  Q
    ||||||||| ||||||| ||||||  |||||||||||  ||||||||||| ||||||||||    
T  31986227 tttacagggggcaaaactaaaagtgacctatattacacggggggtaaagacctattaaccc 31986287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 39515121 - 39515182
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaa 201  Q
    ||||||||| |  |||||||||||  |||||||||||||| ||||||  |||||||||||||    
T  39515121 tttacagggggtcaaaccaaaagtgacctatattacagggagtaaaggcctattaaccctaa 39515182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 960522 - 960554
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  960522 cctatattacagggggtaaagacctattaaccc 960554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 5703190 - 5703138
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||| ||||||||||| ||  ||||| ||||||||||||||||| |||||    
T  5703190 agattcttctgagtcacagtgcataggggacaatcttgaagaatctttatttt 5703138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 21397802 - 21397854
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||||||||||| |||| | |||| |||| ||||||||||||| |||||    
T  21397802 agattctgctgagtcataggggttagggtgcaaccttgaagaatctttatttt 21397854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 21792295 - 21792347
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||||||||||| |||| | |||| |||| ||||||||||||| |||||    
T  21792295 agattctgctgagtcataggggttagggtgcaaccttgaagaatctttatttt 21792347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 28575122 - 28575174
Alignment:
Q  152 aaaaccaaaagtatcctatattacaggg-ggtaaagatctattaaccctaaaa 203  Q
    ||||||||||||  |||||||||||||| |||||||  |||||||||||||||    
T  28575122 aaaaccaaaagtgccctatattacagggtggtaaagtcctattaaccctaaaa 28575174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 31343601 - 31343661
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||| | ||||||||||||  ||||||||||| |||||||||  | ||||||||||    
T  31343601 tttacaggggggaaaaccaaaagtgacctatattacatggggtaaagcaccattaacccta 31343661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 37402530 - 37402478
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    ||||||||||||  |||||||| ||||||||||||   |||||||||||||||    
T  37402530 aaaaccaaaagtgacctatattgcagggggtaaaggcttattaaccctaaaat 37402478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 39913854 - 39913921
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| ||||||||||  || || | ||||||||| ||||||||||||| ||||||||| |||||||||    
T  39913854 agattttgctgagtcaatggacttatggggcaatcgtgaagaatcttca-ttttacaaggacggaatct 39913921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 43400701 - 43400665
Alignment:
Q  168 tatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  43400701 tatattacagggggtaaagacctattaacccttaaat 43400665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 5e-40; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 52 - 199
Target Start/End: Complemental strand, 24234475 - 24234328
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagc 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||           ||||||||| ||    
T  24234475 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaatttttttttttacagggggc 24234377  T
Q  152 aaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    |||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  24234376 aaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 24234328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 24235531 - 24235689
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||           |    
T  24235531 catgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-ttttacaaggacagaatctaaaaataaattt 24235629  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaaccct 199  Q
    |||||||| ||||||||||||||  |||||||||||| |||||||||| |||||||||||    
T  24235630 ttacagggggcaaaaccaaaagtgccctatattacagaggggtaaagacctattaaccct 24235689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 22056642 - 22056482
Alignment:
Q  38 tgtcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnn 137  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||             
T  22056642 tgtcatgtaggtgccacatcatagattctgctgagtcacagagctcagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaa 22056544  T
Q  138 nntttacagggagcaaaaccaaaagtatcctatattacaggg-ggtaaagatctattaaccc 198  Q
      ||||||||| ||||||||||||||  |||||||||||||| | |||||| ||||||||||    
T  22056543 aatttacagggggcaaaaccaaaagtgccctatattacagggagttaaagacctattaaccc 22056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 41 - 198
Target Start/End: Original strand, 22058179 - 22058336
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| |||||||||           |    
T  22058179 catgtaggtgccacatcatagattctgctgagtcatagggctcaaggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaagaat 22058277  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccc 198  Q
    |||||||| ||||||||||||||  ||||||||||| ||||||||||| ||||||||||    
T  22058278 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccc 22058336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 181
Target Start/End: Complemental strand, 24914586 - 24914456
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||| |||||||||            ||||||||     
T  24914586 gccacatcatagattctgctgagtcacaggacttagggggcaatcttgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaaaattacagggg 24914488  T
Q  150 gcaaaaccaaaagtatcctatattacaggggg 181  Q
    |||||| ||||||| |||||||||||||||||    
T  24914487 gcaaaatcaaaagtgtcctatattacaggggg 24914456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 200
Target Start/End: Original strand, 56013 - 56171
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||| ||||||||  |||||||||                
T  56013 catgtaggtgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttca-ttttacaacgacggaatctaaaaaaaaaaaa 56111  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||  ||||| |||||||  |||||||||||||||||||||| ||||||||||||    
T  56112 ttacaggggacaaaatcaaaagtgccctatattacagggggtaaagacctattaacccta 56171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 202
Target Start/End: Complemental strand, 34762319 - 34762178
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaa 159  Q
    ||||||||||||||||  ||||| ||||||||||  ||||||||||||||||| ||||| ||| |||||           ||||||||||||||||||||    
T  34762319 agattctgctgagtcaatgggcttagggggcaattgtgaagaatcttcatttt-acaaggacgaaatctataaaaaaaaatttacagggagcaaaaccaa 34762221  T
Q  160 aagtatcctatattacagggggtaaagatctattaaccctaaa 202  Q
    ||||  ||||||||||||| |||||||| |||||| |||||||    
T  34762220 aagtgccctatattacaggaggtaaagacctattagccctaaa 34762178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 5999857 - 5999795
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||    
T  5999857 gccacatcatagattctgctgagtcacagagctcagggggcaatcctgaagaatctttatttt 5999795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 12322713 - 12322861
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||| ||||||||| |||||||||            ||||||||     
T  12322713 gccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttca-ttttacaaggacggaatctaaaaaaaaaaa-ttacagggg 12322810  T
Q  150 gcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccct 199  Q
    |||||| |||||||  ||||||||||| ||||||||||| |||||||||||    
T  12322811 gcaaaatcaaaagtgccctatattacaggggggtaaagacctattaaccct 12322861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 54952 - 54807
Alignment:
Q  51 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggag 150  Q
    |||||||| ||||||||||||||||  | ||| ||||||||||| |||| |||||||| ||||||||| |||||||||           |||||||||      
T  54952 ccacatcaaagattctgctgagtcaatgagcttagggggcaatcgtgaataatcttca-ttttacaaggacggaatctaattttttttttttacagggga 54854  T
Q  151 caaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||||||| |||||||||||||| || ||||| ||||||||||    
T  54853 caaaaccaaaagtgtcctatattacaggagg-aaagacctattaaccc 54807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 199
Target Start/End: Complemental strand, 12321721 - 12321561
Alignment:
Q  39 gtcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnn 138  Q
    ||||||| || ||||||||| |||||||||| |||||   |||| | ||||||||| ||||||||||||||||| ||||| ||| |||||              
T  12321721 gtcatgtaggtgccacatcaaagattctgctaagtcaataggcttaaggggcaatcgtgaagaatcttcatttt-acaaggacgaaatctataaaaaaaa 12321623  T
Q  139 ntttacagggagcaaaaccaaaagtatcctatattacaggggg-taaagatctattaaccct 199  Q
      |||||||  ||||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  12321622 aattacaggaggcaaaaccaaaagtaccctatattacagggggataaagacctattaaccct 12321561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 14328645 - 14328703
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||    
T  14328645 tttacagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 14328703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 14421655 - 14421713
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||    
T  14421655 tttacagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 14421713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 203
Target Start/End: Original strand, 6000582 - 6000733
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct--nnnnnnnnnnntttacaggga 149  Q
    ||||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| | ||||||||| | |||||||              ||||||||     
T  6000582 cacatcaaagattctgctgagtcacagggcatagggggcaatcctgaagaatcttta-ttttacaaggatggaatctgaagaaaaaaaaaattacaggg- 6000679  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaa 203  Q
    | ||||||||||||   |||||||||||||||||||| ||||||||||||||||    
T  6000680 ggaaaaccaaaagtgctctatattacagggggtaaagctctattaaccctaaaa 6000733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 200
Target Start/End: Original strand, 33485017 - 33485135
Alignment:
Q  82 tcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaaaagtatcctatattaca-gggg 180  Q
    ||||||||||||| ||||||||||| ||||| ||||| ||||||| |           ||||||||| ||||||||||||||| ||||||||||| ||||    
T  33485017 tcagggggcaatcctgaagaatctttatttt-acaaggacggaattttaaaaaaaaaatttacagggggcaaaaccaaaagtaccctatattacaggggg 33485115  T
Q  181 gtaaagatctattaacccta 200  Q
    |||||| ||| |||||||||    
T  33485116 gtaaagctctgttaacccta 33485135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 3063492 - 3063541
Alignment:
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  3063492 gcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccct 3063541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 33483755 - 33483696
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacaggg-ggtaaagatctattaaccc 198  Q
    ||||||| | |||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  33483755 tttacagagggcaaaaccaaaagtgtcctatattacagggtggtaaagacctattaaccc 33483696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 14327427 - 14327361
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaatct 206  Q
    ||||||||| ||||||||||||||  | |||||||||||||||||||  ||||||||| | ||||||    
T  14327427 tttacagggggcaaaaccaaaagtgacgtatattacagggggtaaaggcctattaacctttaaatct 14327361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 14420437 - 14420371
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaatct 206  Q
    ||||||||| ||||||||||||||  | |||||||||||||||||||  ||||||||| | ||||||    
T  14420437 tttacagggggcaaaaccaaaagtgacgtatattacagggggtaaaggcctattaacctttaaatct 14420371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 19412448 - 19412402
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaag 186  Q
    ||||||||| | |||||||||| || |||||||||||||||||||||    
T  19412448 tttacaggggggaaaaccaaaaataacctatattacagggggtaaag 19412402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 29942468 - 29942506
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  29942468 cctatattacagggggtaaagacctattaacccttaaat 29942506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 24387786 - 24387827
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaatcta 207  Q
    |||||||||||||||||||||| |||||||||| ||| ||||    
T  24387786 cctatattacagggggtaaagacctattaacccaaaattcta 24387827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 30409671 - 30409732
Alignment:
Q  143 acagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    |||||| | ||||||||||||  |||||||| |||| |||||||  ||||||||||||||||    
T  30409671 acaggggggaaaaccaaaagtgacctatattgcaggaggtaaaggcctattaaccctaaaat 30409732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 5999763 - 5999715
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    |||||||||| |  ||||||||| ||||||||||| |||||||||||||    
T  5999763 aaaaccaaaaatgccctatattagagggggtaaagctctattaacccta 5999715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 9234847 - 9234811
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaa 202  Q
    ||||||||||||||||||||  |||||||||||||||    
T  9234847 cctatattacagggggtaaaactctattaaccctaaa 9234811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 10344082 - 10344050
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  10344082 cctatattacagggggtaaagacctattaaccc 10344050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 13114430 - 13114398
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  13114430 cctatattacagggggtaaagacctattaaccc 13114398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 13114624 - 13114680
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaac 196  Q
    ||||||||||| |||||| ||| |  | |||||||||||||||||||| ||||||||    
T  13114624 tttacagggaggaaaaccgaaaatgacatatattacagggggtaaagacctattaac 13114680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 22574056 - 22574088
Alignment:
Q  167 ctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||||||||||||| |||||||||||    
T  22574056 ctatattacagggggtaaagacctattaaccct 22574088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 26644700 - 26644748
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||||||  ||||||||||| |||| ||||| ||||||||||||    
T  26644700 aaaaccaaaagtgacctatattacaaggggaaaagacctattaacccta 26644748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 26750666 - 26750714
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    ||||||||||||  ||||||||||| |||| ||||| ||||||||||||    
T  26750666 aaaaccaaaagtgacctatattacaaggggaaaagacctattaacccta 26750714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 30381623 - 30381567
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaacc 197  Q
    |||||| ||| |||||| ||| || ||||||||||||||| |||||| |||||||||    
T  30381623 ttacagtgaggaaaaccgaaaataacctatattacaggggataaagacctattaacc 30381567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 30953810 - 30953882
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaatctaaaaag 212  Q
    ||||||||||| |||||||||||| || ||||||||| ||| ||||   |||||||| ||||||  |||||||    
T  30953810 tttacagggagtaaaaccaaaagtttcatatattacatgggataaaaccctattaactctaaaaaataaaaag 30953882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 203
Target Start/End: Original strand, 196 - 350
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct-nnnnnnnnnnntttacaggg 148  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||| |||||||||            |||||||||    
T  196 gccacatcatagattctgctgagtcaaagggctcagggggcaatcttgaagaatcttca-ttttataaggacggaatctaaaaaaaaactttttacaggg 294  T
Q  149 agcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaaccctaaaa 203  Q
     ||||||||||||||  ||||||||||| ||||||||||| |||||||||||||||    
T  295 ggcaaaaccaaaagtgccctatattacatgggggtaaagacctattaaccctaaaa 350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0804 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 2893 - 2732
Alignment:
Q  38 tgtcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaa-gaacggaatctnnnnnnnn 136  Q
    |||||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||  ||||||| | |||||||||            
T  2893 tgtcatgtaggtgccatatcatagattctgctgagtcacggggctcagggggcaatcttgaagaattttca--tttacaagggacggaatctaaaaaaaa 2796  T
Q  137 nnntttacagggagcaaaaccaaaagtatcctatattacagggg-gtaaagatctattaaccct 199  Q
       ||||||||  ||||||||||||||  ||||||||||||||| ||||||| |||||||||||    
T  2795 aaatttacaggaggcaaaaccaaaagtgccctatattacaggggagtaaagacctattaaccct 2732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 200
Target Start/End: Original strand, 11488 - 11628
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaa 159  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| | ||||||||| |||||||||           ||||||||| ||||||||||    
T  11488 agattctgctgagtcataggggtcagggggcaatcctgaagaatcttta-ttttacaaggacggaatctaaaaaaaaaaatttacagggggcaaaaccaa 11586  T
Q  160 aagtatcctatattaca-gggggtaaagatctattaacccta 200  Q
    |||||   ||||||||| |||||||||| |||||||||||||    
T  11587 aagtactatatattacaggggggtaaagctctattaacccta 11628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 10227 - 10079
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacaggga 149  Q
    ||||| ||| ||||| ||||||||||  ||| | ||||||||||  ||||||||||||||||| ||||| || ||||||           |||||||||     
T  10227 gccacctcagagattttgctgagtcaatgggattagggggcaattgtgaagaatcttcatttt-acaaggactgaatctaattttttttttttacagggg 10129  T
Q  150 gcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||| ||||||  |||||||||||||||||||||| |||||||||||    
T  10128 gcaaaactaaaagtgccctatattacagggggtaaagacctattaaccct 10079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 8230 - 8077
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnttt-acaggg 148  Q
    ||||| ||| ||||||||||||||||  ||||| ||||||||||| |||| |||||||||||| ||||| |||||||||           ||| ||||||    
T  8230 gccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcatttt-acaaggacggaatcttaatttttttattttacaggg 8132  T
Q  149 agcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaaccctaaaa 203  Q
     |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  8131 -gcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctaaaa 8077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 15812 - 15659
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnttt-acaggg 148  Q
    ||||| ||| ||||||||||||||||  ||||| ||||||||||| |||| |||||||||||| ||||| |||||||||           ||| ||||||    
T  15812 gccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcatttt-acaaggacggaatcttaatttttttattttacaggg 15714  T
Q  149 agcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaaccctaaaa 203  Q
     |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  15713 -gcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctaaaa 15659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 25764 - 25611
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnttt-acaggg 148  Q
    ||||| ||| ||||||||||||||||  ||||| ||||||||||| |||| |||||||||||| ||||| |||||||||           ||| ||||||    
T  25764 gccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcatttt-acaaggacggaatcttaatttttttattttacaggg 25666  T
Q  149 agcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaaccctaaaa 203  Q
     |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  25665 -gcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctaaaa 25611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 203
Target Start/End: Complemental strand, 4864 - 4702
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnnt 140  Q
    ||||| || ||||||||| ||||||||||||||||   | || | ||||||||| ||||||||||||||||| ||||| |||||||||           |    
T  4864 catgtaggtgccacatcaaagattctgctgagtcaattgacttacggggcaatcgtgaagaatcttcatttt-acaaggacggaatctaatttttttttt 4766  T
Q  141 ttacagggagcaaaaccaaaagtatcctatattacag-ggggtaaagatctattaaccctaaaa 203  Q
    |||||||  ||||||||||||||  |||||||||||| |||||||||| |||||||||||||||    
T  4765 ttacaggaggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctaaaa 4702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 5793 - 5879
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| || ||||||||| | ||||||||||||||  ||||| ||||||||||| ||||| ||||||| ||||||||| |||||||||    
T  5793 catgtaggtgccacatcaaatattctgctgagtcaatgggcttagggggcaatcgtgaagtatcttca-ttttacaaggacggaatct 5879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 64640 - 64503
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaa 159  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| | ||||||||| ||| |||||            |||||||| ||||||||||    
T  64640 agattctgctgagtcacaggggtcagggggcaatcctgaagaatcttta-ttttacaaggacgaaatctaaaaaaaaaaa-ttacagggggcaaaaccaa 64543  T
Q  160 aagtatcctatattaca-gggggtaaagatctattaaccc 198  Q
    ||||| ||||||||||| ||||||||||| ||||||||||    
T  64542 aagtaccctatattacaggggggtaaagacctattaaccc 64503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 65962 - 66104
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct-nnnnnnnnnnntttacagggagcaaaacca 158  Q
    ||||||||||||||||  ||||| ||||||||||| ||||||||||||| ||||||||| |||||||||            ||||||||| |||||||||    
T  65962 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttca-ttttacaaggacggaatctaatttttttttttttacagggggcaaaacca 66060  T
Q  159 aaagtatcctatattaca-gggggtaaagatctattaaccctaa 201  Q
    ||||| || ||||||||| ||||||||||| |||||||||||||    
T  66061 aaagtgtcatatattacaggggggtaaagacctattaaccctaa 66104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 3972 - 3913
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  3972 tttacagggggcaaaaccaaaagtgtcctacattacagggggtaaagacctattaaccct 3913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 4955 - 5016
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca--gggggtaaagatctattaaccct 199  Q
    ||||||||| ||||||||||||||  |||||||||||  |||||||||||  ||||||||||    
T  4955 tttacagggggcaaaaccaaaagtgacctatattacagggggggtaaagacttattaaccct 5016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 198
Target Start/End: Original strand, 24857 - 24995
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaa 159  Q
    ||||| |||||||||| |||| ||||||||||||| ||||||||||| | ||||||||| ||||||| |           |||| |||| |||||| |||    
T  24857 agattttgctgagtcataggggtcagggggcaatcctgaagaatcttta-ttttacaaggacggaatgtgaaaaaaaatatttatagggggcaaaatcaa 24955  T
Q  160 aagtatcctatattac-agggggtaaagatctattaaccc 198  Q
    ||||| |||||||||| ||||||||||| |||||||||||    
T  24956 aagtaccctatattacaagggggtaaagctctattaaccc 24995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 23743 - 23685
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca-gggggtaaagatctattaacc 197  Q
    ||||||||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||    
T  23743 tttacagggggcaaaatcaaaagtgtcttatattacatgggggtaaagacctattaacc 23685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 16031 - 15947
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaat 126  Q
    ||||| || ||||||||||||||| || |||||||  ||||| |||||||||||| |||||||||||| ||||||||| |||||||    
T  16031 catgtaggtgccacatcatagattttgttgagtcaatgggcttagggggcaatctcgaagaatcttca-ttttacaaggacggaat 15947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 202
Target Start/End: Original strand, 17381 - 17516
Alignment:
Q  66 tgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatctnnnnnnnnnnntttacagggagcaaaaccaaaagtat 165  Q
    ||||||||||  ||||| ||||||||||| ||||||||||||| ||||||||| ||||||| |            |||||| |  ||||||||||||||     
T  17381 tgctgagtcattgggcttagggggcaatcgtgaagaatcttca-ttttacaaggacggaatttaaaaaaaaaaaattacagaggacaaaaccaaaagtac 17479  T
Q  166 cctatattacagggggtaaagatctattaaccctaaa 202  Q
    |||||||||||| || ||| || ||||||||||||||    
T  17480 cctatattacagaggataatgacctattaaccctaaa 17516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 15919 - 15870
Alignment:
Q  151 caaaaccaaaagtatcctatattacagggggtaaagatctattaacccta 200  Q
    |||||| |||||| || ||||||||||||| |||||| ||||||||||||    
T  15919 caaaacaaaaagtgtcatatattacaggggataaagacctattaacccta 15870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 4176 - 4217
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccctaaaatcta 207  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  4176 cctatattacagggggtaaagacctattaaccctaaaatcta 4217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 35657 - 35596
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaa 201  Q
    ||||||||| ||||||||||||||  ||||||||  |||||||||||| |||||||||||||    
T  35657 tttacagggggcaaaaccaaaagtgacctatattttagggggtaaagacctattaaccctaa 35596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 636 - 698
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaa 203  Q
    |||||||| | ||||||| || |  |||||||||||| ||||||||| |||||||||||||||    
T  636 ttacaggggggaaaaccataaatgacctatattacagagggtaaagacctattaaccctaaaa 698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 9966 - 9919
Alignment:
Q  152 aaaaccaaaagtatcctatattacagggggtaaagatctattaaccct 199  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||||    
T  9966 aaaaccaaaagtaccctatattacagggggtaaagttttattaaccct 9919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 2717 - 2775
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccc 198  Q
    |||||| || ||||| ||||||||| ||||||||||||||||||||  |||||||||||    
T  2717 tttacatggggcaaatccaaaagtaccctatattacagggggtaaaactctattaaccc 2775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 37389 - 37447
Alignment:
Q  141 ttacagggagcaaaaccaaaagtatcctatattacagggg-gtaaagatctattaaccc 198  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||||  |||||||||||    
T  37389 ttacagggggcaaaaccaaaagtatcctatatgacaggggtgtaaaactctattaaccc 37447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 227423 - 227366
Alignment:
Q  145 agggagcaaaaccaaaagtatcctatattacaggg-ggtaaagatctattaaccctaa 201  Q
    |||| ||||||||||||||  |||||||||||||| |||||||| |||||||||||||    
T  227423 agggggcaaaaccaaaagtgacctatattacagggaggtaaagacctattaaccctaa 227366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 228585 - 228645
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattaca--gggggtaaagatctattaaccc 198  Q
    ||||||||| ||||||| ||||||  |||||||||||  ||||||||||| ||||||||||    
T  228585 tttacagggggcaaaactaaaagtgacctatattacacggggggtaaagacctattaaccc 228645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 10413 - 10349
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacagggggtaaagatctattaaccctaaaat 204  Q
    ||||||||||| |||||||||| |  | ||||||| |||||||||| | ||||||||||||||||    
T  10413 tttacagggaggaaaaccaaaaatgacttatattagagggggtaaaaacctattaaccctaaaat 10349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 203
Target Start/End: Complemental strand, 7889 - 7854
Alignment:
Q  168 tatattacagggggtaaagatctattaaccctaaaa 203  Q
    |||||||||||||||||||| |||||||||||||||    
T  7889 tatattacagggggtaaagacctattaaccctaaaa 7854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1571 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1571
Description:

Target: scaffold1571; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 183 - 130
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttt 113  Q
    ||||||||||||||||  ||| | ||||| ||||| ||||||||||||||||||    
T  183 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcattttt 130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1147 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1147
Description:

Target: scaffold1147; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 2598 - 2545
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttt 113  Q
    ||||||||||||||||  ||| | ||||| ||||| ||||||||||||||||||    
T  2598 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcattttt 2545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 110468 - 110427
Alignment:
Q  140 tttacagggagcaaaaccaaaagtatcctatattacaggggg 181  Q
    ||||||||||||||||||||||||  | ||||||||||||||    
T  110468 tttacagggagcaaaaccaaaagtgacatatattacaggggg 110427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 91082 - 91049
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccct 199  Q
    |||||||||||||||||||||| |||||||||||    
T  91082 cctatattacagggggtaaagacctattaaccct 91049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 4452 - 4484
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  4452 cctatattacagggggtaaagacctattaaccc 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 20985 - 20910
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||||| ||||||||||||||||   | || ||||||||||| |||| | |||||| ||||||||| |||||||||    
T  20985 cacatcagagattctgctgagtcaatagacttagggggcaatcgtgaaaattcttca-ttttacaaggacggaatct 20910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 34851 - 34883
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  34851 cctatattacagggggtaaagacctattaaccc 34883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 36199 - 36147
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||||||||||| |||| | ||||||||||| |||| |||||| |||||    
T  36199 agattctgctgagtcataggggttagggggcaatcctgaaaaatctttatttt 36147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 29; Significance: 0.0000003; HSPs: 3)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 2797 - 2745
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||||||||||| |||| | ||||||||||| |||| |||||| |||||    
T  2797 agattctgctgagtcatagggattagggggcaatcctgaataatctttatttt 2745  T

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Target: scaffold0093; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 7420 - 7368
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttt 112  Q
    |||||||||||||||| |||| | ||||||||||| |||| |||||| |||||    
T  7420 agattctgctgagtcatagggattagggggcaatcctgaataatctttatttt 7368  T

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Target: scaffold0093; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 8967 - 9034
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttttacaagaacggaatct 128  Q
    ||||| |||||||||| |||| | ||| ||||||| ||||||||||| | ||||||||| |||||||||    
T  8967 agattttgctgagtcataggggttaggaggcaatcctgaagaatcttta-ttttacaaggacggaatct 9034  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 1859 - 1827
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  1859 cctatattacagggggtaaagacctattaaccc 1827  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 26340 - 26308
Alignment:
Q  166 cctatattacagggggtaaagatctattaaccc 198  Q
    |||||||||||||||||||||| ||||||||||    
T  26340 cctatattacagggggtaaagacctattaaccc 26308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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