View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14812_low_2 (Length: 633)

Name: NF14812_low_2
Description: NF14812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14812_low_2
NF14812_low_2
[»] chr8 (43 HSPs)
chr8 (103-615)||(30344074-30344588)
chr8 (193-346)||(24848004-24848157)
chr8 (103-150)||(2680234-2680281)
chr8 (105-191)||(28940714-28940799)
chr8 (103-149)||(32569575-32569621)
chr8 (395-454)||(3753004-3753063)
chr8 (395-454)||(19251732-19251791)
chr8 (395-454)||(19324916-19324975)
chr8 (2-41)||(32574490-32574529)
chr8 (395-454)||(45288147-45288206)
chr8 (104-150)||(4631640-4631686)
chr8 (104-150)||(18375557-18375603)
chr8 (104-150)||(36778476-36778522)
chr8 (104-150)||(41158640-41158686)
chr8 (105-150)||(40586443-40586488)
chr8 (1-41)||(27015391-27015431)
chr8 (103-150)||(8160418-8160465)
chr8 (103-150)||(8763009-8763056)
chr8 (103-150)||(24055837-24055884)
chr8 (104-146)||(2961008-2961050)
chr8 (104-150)||(7391318-7391364)
chr8 (104-146)||(27272686-27272728)
chr8 (105-150)||(1945184-1945229)
chr8 (103-139)||(12249910-12249946)
chr8 (103-139)||(23626054-23626090)
chr8 (103-147)||(27273877-27273921)
chr8 (103-139)||(39445261-39445297)
chr8 (103-139)||(41908017-41908053)
chr8 (103-150)||(25361511-25361558)
chr8 (103-150)||(25833996-25834043)
chr8 (105-144)||(27244398-27244437)
chr8 (103-150)||(41978855-41978902)
chr8 (101-144)||(42060658-42060701)
chr8 (105-139)||(29434280-29434314)
chr8 (5-38)||(4638753-4638786)
chr8 (103-144)||(6300487-6300528)
chr8 (105-146)||(11697110-11697151)
chr8 (105-150)||(25345992-25346037)
chr8 (103-148)||(36597310-36597355)
chr8 (103-144)||(37029917-37029958)
chr8 (103-147)||(5836239-5836283)
chr8 (103-147)||(22332003-22332047)
chr8 (103-147)||(30827035-30827079)
[»] chr6 (35 HSPs)
chr6 (102-615)||(18985189-18985703)
chr6 (262-424)||(11682650-11682814)
chr6 (420-579)||(11681897-11682058)
chr6 (443-540)||(11681792-11681891)
chr6 (353-425)||(22978679-22978753)
chr6 (353-425)||(23809650-23809724)
chr6 (395-454)||(34324997-34325056)
chr6 (103-191)||(11681668-11681756)
chr6 (2-41)||(1619802-1619841)
chr6 (353-425)||(2628006-2628080)
chr6 (103-150)||(24447791-24447838)
chr6 (104-150)||(1363219-1363265)
chr6 (105-150)||(4110057-4110102)
chr6 (1-38)||(19962466-19962503)
chr6 (103-147)||(6966235-6966279)
chr6 (398-454)||(22977466-22977522)
chr6 (398-454)||(23810880-23810936)
chr6 (395-446)||(2626560-2626611)
chr6 (103-146)||(18389166-18389209)
chr6 (103-146)||(33319049-33319092)
chr6 (103-150)||(35160119-35160166)
chr6 (104-142)||(875535-875573)
chr6 (104-150)||(15043827-15043873)
chr6 (109-149)||(1615103-1615143)
chr6 (104-139)||(1932347-1932382)
chr6 (104-147)||(2522023-2522066)
chr6 (103-146)||(5753125-5753168)
chr6 (104-146)||(2624721-2624763)
chr6 (104-150)||(9978707-9978753)
chr6 (105-150)||(1222381-1222426)
chr6 (1-38)||(2634783-2634820)
chr6 (104-144)||(13456734-13456774)
chr6 (107-139)||(29737644-29737676)
chr6 (105-149)||(33979182-33979226)
chr6 (104-148)||(35041995-35042039)
[»] chr5 (33 HSPs)
chr5 (105-615)||(23919814-23920325)
chr5 (193-314)||(39952558-39952679)
chr5 (302-368)||(1190757-1190823)
chr5 (102-150)||(13596915-13596963)
chr5 (103-150)||(1685046-1685093)
chr5 (104-150)||(34719454-34719500)
chr5 (104-150)||(36884780-36884826)
chr5 (105-150)||(3086433-3086478)
chr5 (105-150)||(25695539-25695584)
chr5 (103-150)||(752054-752101)
chr5 (107-150)||(14387898-14387941)
chr5 (103-146)||(36366123-36366166)
chr5 (104-146)||(7863528-7863570)
chr5 (102-148)||(20350823-20350869)
chr5 (104-146)||(22602634-22602676)
chr5 (104-150)||(43136273-43136319)
chr5 (102-147)||(4883070-4883115)
chr5 (105-150)||(41693138-41693183)
chr5 (105-146)||(42819330-42819371)
chr5 (102-146)||(32977099-32977143)
chr5 (103-147)||(34373667-34373711)
chr5 (104-139)||(5620643-5620678)
chr5 (104-139)||(9702716-9702751)
chr5 (104-139)||(9809820-9809855)
chr5 (104-147)||(17997459-17997502)
chr5 (105-148)||(19395652-19395695)
chr5 (105-139)||(12702061-12702095)
chr5 (104-138)||(38041490-38041524)
chr5 (104-141)||(4802095-4802132)
chr5 (102-150)||(30181407-30181458)
chr5 (102-147)||(38935347-38935392)
chr5 (103-147)||(10511663-10511707)
chr5 (103-135)||(33931125-33931157)
[»] scaffold0001 (2 HSPs)
scaffold0001 (199-579)||(12478-12844)
scaffold0001 (106-150)||(12951-12995)
[»] chr7 (39 HSPs)
chr7 (331-552)||(33097948-33098173)
chr7 (193-343)||(25350593-25350743)
chr7 (193-343)||(25356287-25356437)
chr7 (395-454)||(42921787-42921846)
chr7 (101-150)||(691285-691334)
chr7 (102-150)||(21669229-21669277)
chr7 (532-579)||(25350420-25350467)
chr7 (532-579)||(25356114-25356161)
chr7 (103-150)||(39278234-39278281)
chr7 (104-150)||(31896813-31896859)
chr7 (104-150)||(39647981-39648027)
chr7 (439-540)||(25350211-25350313)
chr7 (439-540)||(25355905-25356007)
chr7 (107-150)||(9151415-9151458)
chr7 (104-146)||(12960607-12960649)
chr7 (103-149)||(17817716-17817762)
chr7 (104-150)||(24682277-24682323)
chr7 (104-150)||(27732952-27732998)
chr7 (105-150)||(4850449-4850494)
chr7 (105-150)||(17172890-17172935)
chr7 (420-501)||(25350319-25350400)
chr7 (420-501)||(25356013-25356094)
chr7 (105-150)||(44806574-44806619)
chr7 (102-142)||(272588-272628)
chr7 (103-139)||(9226019-9226055)
chr7 (102-138)||(49023321-49023357)
chr7 (107-150)||(25731126-25731169)
chr7 (104-139)||(38434277-38434312)
chr7 (105-150)||(7854965-7855011)
chr7 (105-139)||(15595432-15595466)
chr7 (105-139)||(23476587-23476621)
chr7 (104-146)||(27840514-27840556)
chr7 (104-150)||(29469214-29469260)
chr7 (104-149)||(19049240-19049285)
chr7 (103-144)||(47573331-47573372)
chr7 (103-139)||(11834955-11834991)
chr7 (103-139)||(21597942-21597978)
chr7 (103-139)||(42996948-42996984)
chr7 (103-150)||(48527407-48527457)
[»] chr1 (30 HSPs)
chr1 (103-150)||(29693384-29693431)
chr1 (395-454)||(47388909-47388968)
chr1 (103-150)||(4893964-4894011)
chr1 (103-150)||(10763584-10763631)
chr1 (103-150)||(42682588-42682635)
chr1 (104-150)||(29840689-29840735)
chr1 (104-150)||(38896811-38896857)
chr1 (104-150)||(52037390-52037436)
chr1 (103-150)||(1375978-1376025)
chr1 (103-146)||(3929746-3929789)
chr1 (103-150)||(19320419-19320466)
chr1 (103-150)||(22194466-22194513)
chr1 (103-146)||(28565428-28565471)
chr1 (103-150)||(29184476-29184523)
chr1 (103-142)||(48183174-48183213)
chr1 (104-150)||(24289200-24289246)
chr1 (104-150)||(28573156-28573202)
chr1 (104-150)||(33074231-33074277)
chr1 (105-150)||(33363568-33363613)
chr1 (104-145)||(47137860-47137901)
chr1 (103-139)||(28631818-28631854)
chr1 (103-138)||(23909714-23909749)
chr1 (105-148)||(24294867-24294910)
chr1 (104-147)||(44407293-44407336)
chr1 (104-146)||(20767556-20767598)
chr1 (105-147)||(31620598-31620640)
chr1 (104-150)||(46623376-46623422)
chr1 (102-139)||(13662116-13662153)
chr1 (103-135)||(45005717-45005749)
chr1 (104-144)||(50394966-50395006)
[»] chr4 (43 HSPs)
chr4 (105-150)||(5483030-5483075)
chr4 (420-580)||(1967648-1967809)
chr4 (103-150)||(35707656-35707703)
chr4 (104-150)||(2118187-2118233)
chr4 (105-150)||(574177-574222)
chr4 (534-579)||(1967812-1967857)
chr4 (105-150)||(3759276-3759321)
chr4 (105-150)||(12680630-12680675)
chr4 (105-150)||(39713496-39713541)
chr4 (1-41)||(35534411-35534451)
chr4 (104-147)||(5759341-5759384)
chr4 (103-150)||(9887269-9887316)
chr4 (103-142)||(27892642-27892681)
chr4 (103-150)||(29713820-29713867)
chr4 (103-150)||(39404590-39404637)
chr4 (104-150)||(8964830-8964876)
chr4 (104-146)||(15650485-15650527)
chr4 (104-150)||(16653191-16653237)
chr4 (104-150)||(30527587-30527633)
chr4 (105-146)||(43014591-43014632)
chr4 (103-147)||(2777221-2777265)
chr4 (103-147)||(22115352-22115396)
chr4 (103-147)||(41983530-41983574)
chr4 (104-147)||(5271601-5271644)
chr4 (105-148)||(8532222-8532265)
chr4 (103-146)||(19591081-19591124)
chr4 (104-147)||(21353963-21354006)
chr4 (103-150)||(37352097-37352144)
chr4 (103-150)||(37356996-37357043)
chr4 (103-150)||(51348063-51348110)
chr4 (105-147)||(14828803-14828845)
chr4 (105-142)||(1975398-1975435)
chr4 (105-146)||(3839095-3839136)
chr4 (103-144)||(15521071-15521112)
chr4 (105-146)||(16895950-16895991)
chr4 (103-148)||(28974008-28974053)
chr4 (104-150)||(36741797-36741845)
chr4 (105-146)||(56541766-56541807)
chr4 (443-536)||(1967543-1967638)
chr4 (2-38)||(1975492-1975528)
chr4 (103-147)||(23479823-23479867)
chr4 (114-150)||(24549419-24549455)
chr4 (103-147)||(38009207-38009251)
[»] chr2 (23 HSPs)
chr2 (105-150)||(45003662-45003707)
chr2 (103-146)||(30922096-30922139)
chr2 (103-150)||(42782670-42782717)
chr2 (104-150)||(4289027-4289073)
chr2 (102-146)||(7364780-7364824)
chr2 (103-150)||(15084296-15084343)
chr2 (103-150)||(28609949-28609996)
chr2 (104-150)||(9542629-9542675)
chr2 (105-150)||(9916707-9916752)
chr2 (105-150)||(25123429-25123474)
chr2 (105-142)||(25124044-25124081)
chr2 (102-147)||(26828459-26828504)
chr2 (105-150)||(44800651-44800696)
chr2 (103-147)||(33908191-33908235)
chr2 (103-138)||(1691425-1691460)
chr2 (104-147)||(5253294-5253337)
chr2 (107-150)||(19488272-19488315)
chr2 (105-147)||(11707573-11707615)
chr2 (104-150)||(19484616-19484662)
chr2 (106-148)||(25573918-25573960)
chr2 (103-144)||(6342727-6342768)
chr2 (102-150)||(10874396-10874444)
chr2 (103-135)||(37224026-37224058)
[»] chr3 (29 HSPs)
chr3 (102-150)||(41053800-41053848)
chr3 (103-150)||(8396762-8396809)
chr3 (103-150)||(22477902-22477949)
chr3 (104-150)||(4137399-4137445)
chr3 (104-150)||(35860998-35861044)
chr3 (104-147)||(18688673-18688716)
chr3 (103-150)||(26776432-26776479)
chr3 (107-150)||(42614239-42614282)
chr3 (103-149)||(5240985-5241031)
chr3 (104-150)||(11950990-11951036)
chr3 (104-150)||(26100777-26100823)
chr3 (105-146)||(188736-188777)
chr3 (1-38)||(44198166-44198203)
chr3 (103-148)||(50742294-50742339)
chr3 (111-151)||(12001433-12001473)
chr3 (104-139)||(21165930-21165965)
chr3 (105-139)||(22522278-22522312)
chr3 (104-138)||(22759056-22759090)
chr3 (104-150)||(24560111-24560157)
chr3 (105-147)||(39576533-39576575)
chr3 (104-150)||(55290396-55290442)
chr3 (102-139)||(16496384-16496421)
chr3 (105-146)||(30766506-30766547)
chr3 (105-150)||(52843181-52843226)
chr3 (102-147)||(52852741-52852786)
chr3 (103-146)||(15315271-15315315)
chr3 (103-139)||(19893178-19893214)
chr3 (104-148)||(52462214-52462258)
chr3 (103-135)||(54934745-54934777)
[»] scaffold0069 (1 HSPs)
scaffold0069 (103-150)||(14644-14691)
[»] scaffold0057 (1 HSPs)
scaffold0057 (104-150)||(17400-17446)
[»] scaffold0249 (1 HSPs)
scaffold0249 (102-146)||(24916-24960)
[»] scaffold0051 (2 HSPs)
scaffold0051 (102-150)||(55556-55604)
scaffold0051 (105-139)||(61720-61754)
[»] scaffold0484 (1 HSPs)
scaffold0484 (103-150)||(8174-8221)
[»] scaffold0381 (1 HSPs)
scaffold0381 (103-150)||(11228-11275)
[»] scaffold0103 (2 HSPs)
scaffold0103 (103-146)||(13023-13066)
scaffold0103 (1-38)||(5189-5226)
[»] scaffold0009 (1 HSPs)
scaffold0009 (104-150)||(139571-139617)
[»] scaffold0242 (1 HSPs)
scaffold0242 (103-147)||(2707-2751)
[»] scaffold0088 (1 HSPs)
scaffold0088 (103-139)||(52691-52727)
[»] scaffold0171 (1 HSPs)
scaffold0171 (104-147)||(29638-29681)
[»] scaffold0047 (1 HSPs)
scaffold0047 (105-147)||(25614-25656)
[»] scaffold0027 (1 HSPs)
scaffold0027 (104-146)||(143213-143255)
[»] scaffold0005 (1 HSPs)
scaffold0005 (105-147)||(10864-10906)
[»] scaffold0006 (2 HSPs)
scaffold0006 (102-139)||(151878-151915)
scaffold0006 (103-139)||(64401-64437)


Alignment Details
Target: chr8 (Bit Score: 440; Significance: 0; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 103 - 615
Target Start/End: Complemental strand, 30344588 - 30344074
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatttttcnnnnnnnntagttctaaaggagagatgttcaaattacagatatttgtgaac 202  Q
    |||||||||||||||  ||||||| |||| |||||||||||||||||||        ||| ||||||||||||||||||||||||||||||||||||||     
T  30344588 aaactagttacaaacatgtgcttcgcacgagttgaattacgtatttttcaaaaaaattagctctaaaggagagatgttcaaattacagatatttgtgaat 30344489  T
Q  203 gaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatgtactacaaca 302  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30344488 gaaggtcacataatccgaatatttgtgatgcatggtctaagacatggcataaaagatagcataacaattattgtcattgcgtacataatgtactacaaca 30344389  T
Q  303 gaaatatagatgttgtcatgtagtgtacaaccaatttaaggttggttaccaaaaaagggttggattactaaatccaaaccacattcaaaacattgtcatc 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30344388 gaaatatagatgttgtcatgtagtgtacaaccaatttaaggttggttaccaaaaaagggttggattactaaatccaaaccacattcaaaacattgtcatc 30344289  T
Q  403 gaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaaaca--a 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  30344288 gaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaaacaaca 30344189  T
Q  501 ctgtaggaggaacacctaaatcgagtaacagcttgtcgtcctcttgtaggtgattgtccctaacaaattggaaccaaccagccggtcttgcaaatgccag 600  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30344188 ctgtaggagtaacacctaaatcgaataacagcttgtcgccctcttgtaggtgattgtccctaacaaattggaaccaaccagccggtcttgcaaatgccag 30344089  T
Q  601 ttcatggacacttgt 615  Q
    |||||||||||||||    
T  30344088 ttcatggacacttgt 30344074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 193 - 346
Target Start/End: Original strand, 24848004 - 24848157
Alignment:
Q  193 atttgtgaacgaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatg 292  Q
    ||||| ||||||||||| ||||||||||||||||  |||||||||||||||  ||  ||| ||||||| ||||||||  ||||||||| | ||||||| |    
T  24848004 atttgagaacgaaggtcgcataatccgaatatttacgatgcatggtctaaggcataacatcaaagataacataacaaccattgtcattacatacataacg 24848103  T
Q  293 tactacaacagaaatatagatgttgtcatgtagtgtacaaccaatttaaggttg 346  Q
    |||| || || ||||||||||| || |||||||||||||||||||| |||||||    
T  24848104 tactgcagcacaaatatagatgctgccatgtagtgtacaaccaattcaaggttg 24848157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 2680234 - 2680281
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  2680234 aaactagttacaaacccgtgcttcgcacgggttgaattacgtattttt 2680281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 28940714 - 28940799
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtatttttcnnnnnnnntagttctaaaggagagatgttcaaattacaga 191  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||         | ||||||||||||||||||||||||||||||    
T  28940714 actagttacaaacccgtgcttcgcacgggttgaattacgtactttt-taaaaaatttgttctaaaggagagatgttcaaattacaga 28940799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 32569575 - 32569621
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatttt 149  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  32569575 aaactagttacaaacccgtgcttcgcacgggttgaattacgtatttt 32569621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 454
Target Start/End: Complemental strand, 3753063 - 3753004
Alignment:
Q  395 ttgtcatcgaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaa 454  Q
    ||||||| |||||||||||||||||||||||||||   ||||||||||||||| ||||||    
T  3753063 ttgtcattgaaatattatacaaaatatacatgccataatacaatttccaaaagattagaa 3753004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 454
Target Start/End: Complemental strand, 19251791 - 19251732
Alignment:
Q  395 ttgtcatcgaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaa 454  Q
    ||||||| ||||||||||||||||||||||||||||  |||||||| |||||| ||||||    
T  19251791 ttgtcattgaaatattatacaaaatatacatgccagaatacaattttcaaaagattagaa 19251732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 454
Target Start/End: Complemental strand, 19324975 - 19324916
Alignment:
Q  395 ttgtcatcgaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaa 454  Q
    ||||||| ||||||||||||||||||||||||||||  |||||||| |||||| ||||||    
T  19324975 ttgtcattgaaatattatacaaaatatacatgccagaatacaattttcaaaagattagaa 19324916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 32574490 - 32574529
Alignment:
Q  2 ttactaatttaccaaaatacccctataagggcaaaatggt 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32574490 ttactaatttaccaaaatacccctataagggcaaaatggt 32574529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 454
Target Start/End: Original strand, 45288147 - 45288206
Alignment:
Q  395 ttgtcatcgaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaa 454  Q
    ||||||| |||||||||||||||||||||||||||   ||||||||||||||| ||||||    
T  45288147 ttgtcattgaaatattatacaaaatatacatgccaaaatacaatttccaaaagattagaa 45288206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 4631640 - 4631686
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  4631640 aactagttacaaacccgtgcttcgcacgggttgaattacctattttt 4631686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 18375557 - 18375603
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  18375557 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 18375603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 36778522 - 36778476
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  36778522 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 36778476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 41158686 - 41158640
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  41158686 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 41158640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 40586443 - 40586488
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  40586443 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 40586488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27015391 - 27015431
Alignment:
Q  1 tttactaatttaccaaaatacccctataagggcaaaatggt 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  27015391 tttactaatttaccaaaatacccccataagggcaaaatggt 27015431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 8160418 - 8160465
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  8160418 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 8160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 8763056 - 8763009
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  8763056 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 8763009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 24055884 - 24055837
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  24055884 aaactagttacaaacccgtgcttcgcacaggttgaataacgtattttt 24055837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 2961008 - 2961050
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  2961008 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 2961050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 7391364 - 7391318
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||||    
T  7391364 aactagttacaaacccgtgcttcgcacgggttgaataacgttttttt 7391318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 27272728 - 27272686
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  27272728 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 27272686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 1945229 - 1945184
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||    
T  1945229 actagttacaaacccgtgctttgcacgggttgaataacgtattttt 1945184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 12249910 - 12249946
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||||| ||||||||||||    
T  12249910 aaactagttacaaacccgtgcttcgcacgggttgaat 12249946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 23626054 - 23626090
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||||| ||||||||||||    
T  23626054 aaactagttacaaacccgtgcttcgcacgggttgaat 23626090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 27273921 - 27273877
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  27273921 aaactagttacaaacccgtgcttcgcacgggttcaataacgtatt 27273877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 39445297 - 39445261
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||||| ||||||||||||    
T  39445297 aaactagttacaaacccgtgcttcgcacgggttgaat 39445261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 41908053 - 41908017
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||||| ||||||||||||    
T  41908053 aaactagttacaaacccgtgcttcgcacgggttgaat 41908017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 25361558 - 25361511
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||| ||||| || |||||||    
T  25361558 aaactagttacaaacccgtgcttcacacgggatgaataacatattttt 25361511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 25833996 - 25834043
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  ||||| |||||| ||||||||||    
T  25833996 aaactagttacaaacccgtgctttgcacggattgaataacgtattttt 25834043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 27244398 - 27244437
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgt 144  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  27244398 actagttacaaacccatgcttcgcacgggttgaattacgt 27244437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 41978902 - 41978855
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||| |||| |||||||| |||||||||||| ||||||||||    
T  41978902 aaactagttagaaactcgtgcttcgcacgggttgaataacgtattttt 41978855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 42060658 - 42060701
Alignment:
Q  101 ccaaactagttacaaacccgtgcttcccacgggttgaattacgt 144  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||    
T  42060658 ccaaactagttacaaacccgtgcttcgcacgggttcaataacgt 42060701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 29434314 - 29434280
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||| ||||||||||||    
T  29434314 actagttacaaacccgtgcttcacacgggttgaat 29434280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 4638753 - 4638786
Alignment:
Q  5 ctaatttaccaaaatacccctataagggcaaaat 38  Q
    |||||||||| |||||||||||||||||||||||    
T  4638753 ctaatttacctaaatacccctataagggcaaaat 4638786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 6300487 - 6300528
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgt 144  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  6300487 aaactagttacaaacccgtgcttcgcacgggttcaataacgt 6300528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 11697151 - 11697110
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||||  |||||||||||| ||||||    
T  11697151 actagttacaaacccgtgctttgcacgggttgaataacgtat 11697110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 25346037 - 25345992
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||| |||||| ||||| |||||| ||||||||||    
T  25346037 actagttacaaacccatgcttcgcacggattgaataacgtattttt 25345992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 36597310 - 36597355
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattt 148  Q
    |||||||||||||||||||||||| |||||||| ||| || |||||    
T  36597310 aaactagttacaaacccgtgcttcgcacgggttcaatgacatattt 36597355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 37029958 - 37029917
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgt 144  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  37029958 aaactagttacaaacccgtgcttcgcacgggttcaataacgt 37029917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 5836283 - 5836239
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||| ||||||| |||||||| ||| |||||||    
T  5836283 aaactagttacaaacctgtgcttcgcacgggttcaataacgtatt 5836239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 22332003 - 22332047
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||| ||||||||||| |||||||| ||| |||||||    
T  22332003 aaactagttacagacccgtgcttcgcacgggttcaataacgtatt 22332047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 30827079 - 30827035
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||||||||||||  ||||||| ||| |||||||    
T  30827079 aaactagttacaaacccgtgcttcgtacgggttcaataacgtatt 30827035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 413; Significance: 0; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 102 - 615
Target Start/End: Original strand, 18985189 - 18985703
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtatttttcnnnnnnnntagttctaaaggagagatgttcaaattacagatatttgtgaa 201  Q
    ||||||||||||||||||||||||| ||||||||||||||| | |||||         ||  ||||||||||| ||||||||||||||||||||||||||    
T  18985189 caaactagttacaaacccgtgcttcgcacgggttgaattacatgttttt-taaaaaattaactctaaaggagatatgttcaaattacagatatttgtgaa 18985287  T
Q  202 cgaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatgtactacaac 301  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |    
T  18985288 cgaaggtcacataatccgaatatttgtgatgcatggtctaagacatggcattaaagatagcataacaattattgtcattgcgtacataatgtactccagc 18985387  T
Q  302 agaaatatagatgttgtcatgtagtgtacaaccaatttaaggttggttaccaaaaaagggttggattactaaatccaaaccacattcaaaacattgtcat 401  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18985388 agaaatatagatgttgtcatgtagtgtataaccaatttaaggttggttaccaaaaaagggttggattactaaatccaaaccacattcaaaacattgtcat 18985487  T
Q  402 cgaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaaaca-- 499  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||      
T  18985488 cgaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaacttttcttcaagcaagatcatttttacggaccaactccacaaacaac 18985587  T
Q  500 actgtaggaggaacacctaaatcgagtaacagcttgtcgtcctcttgtaggtgattgtccctaacaaattggaaccaaccagccggtcttgcaaatgcca 599  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18985588 actgtaggaggaacacctaaatcgaatagcagcttgtcgtcctcttgtaggtgattgtccctaacaaattggaaccaaccagccggtcttgcaaatgcca 18985687  T
Q  600 gttcatggacacttgt 615  Q
    ||||||||||||||||    
T  18985688 gttcatggacacttgt 18985703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 262 - 424
Target Start/End: Original strand, 11682650 - 11682814
Alignment:
Q  262 cataacaattattgtcattgcgtacataatgtactacaacagaaatatagatgttgtcatgtagtgtacaaccaatttaaggttggttaccaaaaaaggg 361  Q
    ||||| || |||||||||| | ||||||||||||| ||||| | ||||||||| || |||||||   |||||| ||||||||||| |||  |||||||||    
T  11682650 cataataactattgtcatttcatacataatgtactgcaacacacatatagatgatgccatgtagccaacaacctatttaaggttgattataaaaaaaggg 11682749  T
Q  362 ttggattactaaatccaaaccaca-ttcaaa-acattgtcatcgaaatattatacaaaatataca 424  Q
    |||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  11682750 ttggattattaaatccaaaccacatttcaaacacattgtcattgaaatattatacaaaatataca 11682814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 420 - 579
Target Start/End: Original strand, 11681897 - 11682058
Alignment:
Q  420 atacatgccagcgtacaatttccaaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaaacaac--tgtaggaggaacacct 517  Q
    ||||||| |||| ||||| | ||||| | |||||||||||||| ||||||||| ||||||| | |||| ||| |||||||||  |||||||   |||||     
T  11681897 atacatgtcagcatacaactgccaaaggattagaacttttcttaaagcaagattatttctacgaaccacctcaacaaacaacattgtaggaaagacaccc 11681996  T
Q  518 aaatcgagtaacagcttgtcgtcctcttgtaggtgattgtccctaacaaattggaaccaacc 579  Q
    ||||| | || |  |||||||||||||||||||||||||||||||||||| |||||||||||    
T  11681997 aaatcaaatagctacttgtcgtcctcttgtaggtgattgtccctaacaaactggaaccaacc 11682058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 443 - 540
Target Start/End: Original strand, 11681792 - 11681891
Alignment:
Q  443 aaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaaacaac--tgtaggaggaacacctaaatcgagtaacagcttgtcgtc 540  Q
    ||||| |||||| ||||||| ||||||||| ||||||| | |||| ||| |||||||||  ||||||||||||||||||||| | || ||||||||||||    
T  11681792 aaaagattagaaattttcttaaagcaagattatttctacgaaccacctcaacaaacaacattgtaggaggaacacctaaatcaaatagcagcttgtcgtc 11681891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 425
Target Start/End: Original strand, 22978679 - 22978753
Alignment:
Q  353 aaaaaagggttggattactaaatccaaaccaca--ttcaaaacattgtcatcgaaatattatacaaaatatacat 425  Q
    |||||||||||||||||||| |||||||||| |  ||||| |||| ||||||||||||||||||||| |||||||    
T  22978679 aaaaaagggttggattactatatccaaaccataatttcaacacatagtcatcgaaatattatacaaattatacat 22978753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 425
Target Start/End: Complemental strand, 23809724 - 23809650
Alignment:
Q  353 aaaaaagggttggattactaaatccaaaccaca--ttcaaaacattgtcatcgaaatattatacaaaatatacat 425  Q
    |||||||||||||||||||| |||||||||| |  ||||| |||| ||||||||||||||||||||| |||||||    
T  23809724 aaaaaagggttggattactatatccaaaccataatttcaacacatagtcatcgaaatattatacaaattatacat 23809650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 395 - 454
Target Start/End: Complemental strand, 34325056 - 34324997
Alignment:
Q  395 ttgtcatcgaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaa 454  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  34325056 ttgtcattgaaatattatacaaaatatacatgccagaatacaatttccaaaagattagaa 34324997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 11681668 - 11681756
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatttttcnnnnnnnntagttctaaaggagagatgttcaaattacaga 191  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||         |   ||||||||||||||||||||||||||||    
T  11681668 aaactagttacaaacccgtgcttcgcacgggttgaattacgtacttttttaaaaaaattactctaaaggagagatgttcaaattacaga 11681756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 1619802 - 1619841
Alignment:
Q  2 ttactaatttaccaaaatacccctataagggcaaaatggt 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1619802 ttactaatttaccaaaatacccctataagggcaaaatggt 1619841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 425
Target Start/End: Original strand, 2628006 - 2628080
Alignment:
Q  353 aaaaaagggttggattactaaatccaaaccaca--ttcaaaacattgtcatcgaaatattatacaaaatatacat 425  Q
    |||||||||||||||||||| |||||||||| |  ||||| |||  ||||||||||||||||||||| |||||||    
T  2628006 aaaaaagggttggattactatatccaaaccataatttcaacacacagtcatcgaaatattatacaaattatacat 2628080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 24447838 - 24447791
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  24447838 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 24447791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 1363265 - 1363219
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  1363265 aactagttacaaacccgtgcttcgcacgggttgaattacatattttt 1363219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 4110102 - 4110057
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  4110102 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 4110057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19962503 - 19962466
Alignment:
Q  1 tttactaatttaccaaaatacccctataagggcaaaat 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19962503 tttactaatttaccaaaatacccctataagggcaaaat 19962466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 6966235 - 6966279
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  6966235 aaactagttacaaacccgtgcttcgcacgggttgaataacgtatt 6966279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 454
Target Start/End: Original strand, 22977466 - 22977522
Alignment:
Q  398 tcatcgaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaa 454  Q
    |||| |||||||||||||||||||||||||||   ||||||||||||||| ||||||    
T  22977466 tcattgaaatattatacaaaatatacatgccaaaatacaatttccaaaagattagaa 22977522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 454
Target Start/End: Complemental strand, 23810936 - 23810880
Alignment:
Q  398 tcatcgaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaa 454  Q
    |||| |||||||||||||||||||||||||||   ||||||||||||||| ||||||    
T  23810936 tcattgaaatattatacaaaatatacatgccaaaatacaatttccaaaagattagaa 23810880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 446
Target Start/End: Original strand, 2626560 - 2626611
Alignment:
Q  395 ttgtcatcgaaatattatacaaaatatacatgccagcgtacaatttccaaaa 446  Q
    ||||||| |||||||||||||||||||||||||||   ||||||||||||||    
T  2626560 ttgtcattgaaatattatacaaaatatacatgccaaaatacaatttccaaaa 2626611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 18389166 - 18389209
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  18389166 aaactagttacaaacccgtgcttcgcacgggttgaataacgtat 18389209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 146
Target Start/End: Complemental strand, 33319092 - 33319049
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  33319092 aaactagttacaaacccgtgcttcgcacgggttgaataacgtat 33319049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 35160166 - 35160119
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  35160166 aaactagttacaaatccgtgcttcgcacgggttgaataacgtattttt 35160119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 142
Target Start/End: Complemental strand, 875573 - 875535
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattac 142  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  875573 aactagttacaaacccgtgcttcgcacgggttgaattac 875535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 15043827 - 15043873
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  15043827 aactagttacaaacccgtgcttcgcacggattgaataacgtattttt 15043873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 1615103 - 1615143
Alignment:
Q  109 gttacaaacccgtgcttcccacgggttgaattacgtatttt 149  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  1615103 gttacaaacccatgcttcacacgggttgaattacgtatttt 1615143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 1932382 - 1932347
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaat 139  Q
    ||||||||||||||||||||||| ||||||||||||    
T  1932382 aactagttacaaacccgtgcttcgcacgggttgaat 1932347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 2522066 - 2522023
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  2522066 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 2522023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 5753125 - 5753168
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||    
T  5753125 aaactagttacaaacccgtacttcgcacgggttgaataacgtat 5753168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 2624721 - 2624763
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||| || |||||||||||| ||||||    
T  2624721 aactagttacaaacccgtgcatcgcacgggttgaataacgtat 2624763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 9978707 - 9978753
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||| |||||||| |||||||||||| || |||||||    
T  9978707 aactagttacaaactcgtgcttcgcacgggttgaataacatattttt 9978753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 1222426 - 1222381
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| || || |||||| ||||||||||    
T  1222426 actagttacaaacccgtgcttcgcatggattgaataacgtattttt 1222381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2634783 - 2634820
Alignment:
Q  1 tttactaatttaccaaaatacccctataagggcaaaat 38  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  2634783 tttactaatttaccaaaatacccttctaagggcaaaat 2634820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 13456734 - 13456774
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgt 144  Q
    ||||||||||||||||||||||| |||||||| ||| ||||    
T  13456734 aactagttacaaacccgtgcttcgcacgggttcaataacgt 13456774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 139
Target Start/End: Complemental strand, 29737676 - 29737644
Alignment:
Q  107 tagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||| ||||||||||||    
T  29737676 tagttacaaacccgtgcttcgcacgggttgaat 29737644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 33979226 - 33979182
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtatttt 149  Q
    |||||||||||||||||| ||| |||||||| ||| |||||||||    
T  33979226 actagttacaaacccgtgtttcgcacgggtttaataacgtatttt 33979182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 35042039 - 35041995
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattt 148  Q
    ||||||||||||||||||| ||| |||||||| ||| ||||||||    
T  35042039 aactagttacaaacccgtgtttcgcacgggttcaataacgtattt 35041995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 410; Significance: 0; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 105 - 615
Target Start/End: Complemental strand, 23920325 - 23919814
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtatttttcnnnnnnnntagttctaaaggagagatgttcaaattacagatatttgtgaacga 204  Q
    |||||||||||||||||||||| ||||||||||||||| | |||||         ||  ||||||||||| |||||||||||||||||||||||||||||    
T  23920325 actagttacaaacccgtgcttcgcacgggttgaattacatgttttt-taaaaaattaactctaaaggagatatgttcaaattacagatatttgtgaacga 23920227  T
Q  205 aggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatgtactacaacaga 304  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  23920226 aggtcacataatccgaatatttgtgatgcatggtctaagacatggcattaaagatagcataacaattattgtcattgcgtacataatgtactccagcaga 23920127  T
Q  305 aatatagatgttgtcatgtagtgtacaaccaatttaaggttggttaccaaaaaagggttggattactaaatccaaaccacattcaaaacattgtcatcga 404  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23920126 aatatagatgttgtcatgtagtgtataaccaatttaaggttggttaccaaaaaagggttggattactaaatccaaaccacattcaaaacattgtcatcga 23920027  T
Q  405 aatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaaaca--act 502  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||  |||    
T  23920026 aatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaacttttcttcaagcaagatcatttttacggaccaactccacaaacaacact 23919927  T
Q  503 gtaggaggaacacctaaatcgagtaacagcttgtcgtcctcttgtaggtgattgtccctaacaaattggaaccaaccagccggtcttgcaaatgccagtt 602  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23919926 gtaggaggaacacctaaatcgaatagcagcttgtcgtcctcttgtaggtgattgtccctaacaaattggaaccaaccagccggtcttgcaaatgccagtt 23919827  T
Q  603 catggacacttgt 615  Q
    |||||||||||||    
T  23919826 catggacacttgt 23919814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 193 - 314
Target Start/End: Complemental strand, 39952679 - 39952558
Alignment:
Q  193 atttgtgaacgaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatg 292  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| | |||||||||    
T  39952679 atttgagaacgaaggtcgcataatccgaatatttgtgatgcatggtctaaagcatggcataaaagatagcataacaattattgtcattacatacataatg 39952580  T
Q  293 tactacaacagaaatatagatg 314  Q
    |||| || || |||||||||||    
T  39952579 tactgcagcataaatatagatg 39952558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 302 - 368
Target Start/End: Original strand, 1190757 - 1190823
Alignment:
Q  302 agaaatatagatgttgtcatgtagtgtacaaccaatttaaggttggttaccaaaaaagggttggatt 368  Q
    ||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  1190757 agaaatatagatgctatcatgtagtgtacaaccaatttaaggttgattaccaaaaaagggttagatt 1190823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 13596963 - 13596915
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13596963 caaactagttacaaacccgtgcttcgcacgggttgaattacgtattttt 13596915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 1685046 - 1685093
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  1685046 aaactagttacaaacccgtgcttcgcacgggttgaattatgtattttt 1685093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 34719500 - 34719454
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  34719500 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 34719454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 36884780 - 36884826
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  36884780 aactagttacaaacccgtgcttcacacgggttgaataacgtattttt 36884826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 3086433 - 3086478
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  3086433 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 3086478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 25695539 - 25695584
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  25695539 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 25695584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 752054 - 752101
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  752054 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 752101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 14387898 - 14387941
Alignment:
Q  107 tagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  14387898 tagttacaaacccgtgcttcgcacgggttgaataacgtattttt 14387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 36366123 - 36366166
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  36366123 aaactagttacaaacccgtgcttcgcacgggttgaataacgtat 36366166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 7863528 - 7863570
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  7863528 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 7863570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 20350869 - 20350823
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtattt 148  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  20350869 caaactagttacaaacccgtgcttcgcacgggttcaataacgtattt 20350823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 22602634 - 22602676
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  22602634 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 22602676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 43136273 - 43136319
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  43136273 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 43136319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 4883115 - 4883070
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||||    
T  4883115 caaactagttacaaacccgtgcttcgcacgggttcaataacgtatt 4883070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 41693183 - 41693138
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||||    
T  41693183 actagttacaaactcgtgcttcgcacgggttgaataacgtattttt 41693138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 42819330 - 42819371
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  42819330 actagttacaaacccgtgcttcgcacgggttgaataacgtat 42819371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 32977099 - 32977143
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||||    
T  32977099 caaactagttacaaaccggtgcttcgcacgggttgaataacgtat 32977143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 34373667 - 34373711
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  34373667 aaactagttacaaacccgtgcttcgcacgggtttaataacgtatt 34373711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 139
Target Start/End: Original strand, 5620643 - 5620678
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaat 139  Q
    ||||||||||||||||||||||| ||||||||||||    
T  5620643 aactagttacaaacccgtgcttcgcacgggttgaat 5620678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 9702751 - 9702716
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaat 139  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9702751 aactagttacaaacccgtgcttcgcacgggttgaat 9702716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 139
Target Start/End: Original strand, 9809820 - 9809855
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaat 139  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9809820 aactagttacaaacccgtgcttcgcacgggttgaat 9809855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 17997502 - 17997459
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  17997502 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 17997459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 19395695 - 19395652
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattt 148  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||    
T  19395695 actagttacaaacccgtgcttcgcacgggttcaataacgtattt 19395652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 12702061 - 12702095
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||| ||||||||||||    
T  12702061 actagttacaaacccgtgcttcgcacgggttgaat 12702095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 138
Target Start/End: Original strand, 38041490 - 38041524
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaa 138  Q
    ||||||||||||||||||||||| |||||||||||    
T  38041490 aactagttacaaacccgtgcttcgcacgggttgaa 38041524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 4802095 - 4802132
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaatta 141  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  4802095 aactagttacaaacccgtgcttcgcacgggttgtatta 4802132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 30181458 - 30181407
Alignment:
Q  102 caaactagttacaaacccgtgc---ttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||   ||| |||||||||||| ||||||||||    
T  30181458 caaactagttacaaacccgtgcgaattcgcacgggttgaataacgtattttt 30181407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 38935392 - 38935347
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||||||  ||||||| ||| |||||||    
T  38935392 caaactagttacaaacccgtgcttcgtacgggttcaataacgtatt 38935347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 10511663 - 10511707
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||| |||||||| |||||||| ||| |||||||    
T  10511663 aaactagttacaaactcgtgcttcacacgggttcaataacgtatt 10511707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 33931157 - 33931125
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggtt 135  Q
    |||||||||||||||||||||||| ||||||||    
T  33931157 aaactagttacaaacccgtgcttcgcacgggtt 33931125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 199 - 579
Target Start/End: Complemental strand, 12844 - 12478
Alignment:
Q  199 gaacgaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatgtactac 298  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||| ||||||||| | ||||||||||||| |    
T  12844 gaacgaaggtcgcataatccgaatatttgtgatgcatgatctaaggcatggcataaaagataacataacaatcattgtcattacatacataatgtactgc 12745  T
Q  299 aacagaaatatagatgttgtcatgtagtgtacaaccaatttaaggttggttaccaaaaaagggttggattactaaatccaaaccacattcaaaacat--t 396  Q
    | ||||||| ||||||||| |||||||||||||||||||||||||||||                  |||||||||||||||| |||||||| ||||  |    
T  12744 agcagaaatgtagatgttgccatgtagtgtacaaccaatttaaggttgg------------------attactaaatccaaacgacattcaacacatatt 12663  T
Q  397 gtcatcgaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaa 496  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||| |  ||| ||| | ||    
T  12662 gtcatcgaaatattatacaaaatatacatgccagcatacaatttccaaaagtttagaacttttcttcaagtaagataatttctacgagccacctcaagaa 12563  T
Q  497 acaac--tgtaggaggaacacctaaatcgagtaacagcttgtcgtcctcttgtaggtgattgtccctaacaaattggaaccaacc 579  Q
    |||||  ||||||||||||||||||||||| || |||||||||| |||||||||||| |||||||||||||||||| ||||||||    
T  12562 acaacattgtaggaggaacacctaaatcgaatagcagcttgtcgccctcttgtaggtaattgtccctaacaaattgtaaccaacc 12478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 12995 - 12951
Alignment:
Q  106 ctagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||| ||||||| |||||||||||||||||| ||||    
T  12995 ctagttacaaacctgtgcttcgcacgggttgaattacgtaatttt 12951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 2e-63; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 331 - 552
Target Start/End: Original strand, 33097948 - 33098173
Alignment:
Q  331 aaccaatttaaggttggttaccaaaaaagggttggattactaaatccaaaccacattcaaaac--attgtcatcgaaatattatacaaaatatacatgcc 428  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||| |||||  |||||||| ||||||||||||||||||||||||||    
T  33097948 aaccaatttaaggttgattagcaaaaatgggttggattactaaatccaaaccacatttaaaacgtattgtcattgaaatattatacaaaatatacatgcc 33098047  T
Q  429 agcgtacaatttccaaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaaacaac--tgtaggaggaacacctaaatcgagt 526  Q
    | | ||||| ||||||||| |||||||||||||||||||||||| ||||||| | |||| ||| |||||||||  ||||||||||||| | ||||||| |    
T  33098048 atcttacaacttccaaaagattagaacttttcttcaagcaagattatttctacgaaccacctcaacaaacaacattgtaggaggaacatccaaatcgaat 33098147  T
Q  527 aacagcttgtcgtcctcttgtaggtg 552  Q
    | |||||||||  |||||||||||||    
T  33098148 agcagcttgtcaccctcttgtaggtg 33098173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 25350593 - 25350743
Alignment:
Q  193 atttgtgaacgaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatg 292  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||||||  ||| ||||||| ||| ||||||||| ||||| ||| | || ||||||    
T  25350593 atttgagaacgaaggacgcataatccgaatatttgtgatgcatggtctaaggcatgacataaaaaataacataacaatcattgttattacatagataatg 25350692  T
Q  293 tactacaacagaaatatagatgttgtcatgtagtgtacaaccaatttaagg 343  Q
    ||||||| || ||||||||||| ||||||||||||||||||||||||||||    
T  25350693 tactacagcataaatatagatgatgtcatgtagtgtacaaccaatttaagg 25350743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 25356287 - 25356437
Alignment:
Q  193 atttgtgaacgaaggtcacataatccgaatatttgtgatgcatggtctaagatatggcataaaagatagcataacaattattgtcattgcgtacataatg 292  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||||||  ||| ||||||| ||| ||||||||| ||||| ||| | || ||||||    
T  25356287 atttgagaacgaaggacgcataatccgaatatttgtgatgcatggtctaaggcatgacataaaaaataacataacaatcattgttattacatagataatg 25356386  T
Q  293 tactacaacagaaatatagatgttgtcatgtagtgtacaaccaatttaagg 343  Q
    ||||||| || ||||||||||| ||||||||||||||||||||||||||||    
T  25356387 tactacagcataaatatagatgatgtcatgtagtgtacaaccaatttaagg 25356437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 395 - 454
Target Start/End: Complemental strand, 42921846 - 42921787
Alignment:
Q  395 ttgtcatcgaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaa 454  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  42921846 ttgtcattgaaatattatacaaaatatacatgccagaatacaatttccaaaagattagaa 42921787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 691334 - 691285
Alignment:
Q  101 ccaaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  691334 ccaaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 691285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 21669229 - 21669277
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  21669229 caaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 21669277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 532 - 579
Target Start/End: Original strand, 25350420 - 25350467
Alignment:
Q  532 cttgtcgtcctcttgtaggtgattgtccctaacaaattggaaccaacc 579  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||    
T  25350420 cttgtcatcctcttgtaggtgattgtccctaacaaactggaaccaacc 25350467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 532 - 579
Target Start/End: Original strand, 25356114 - 25356161
Alignment:
Q  532 cttgtcgtcctcttgtaggtgattgtccctaacaaattggaaccaacc 579  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||    
T  25356114 cttgtcatcctcttgtaggtgattgtccctaacaaactggaaccaacc 25356161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 39278281 - 39278234
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  39278281 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 39278234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 31896813 - 31896859
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  31896813 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 31896859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 39647981 - 39648027
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  39647981 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 39648027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 439 - 540
Target Start/End: Original strand, 25350211 - 25350313
Alignment:
Q  439 ttccaaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaaacaac--tgtaggaggaacacctaaatcgagtaacagcttgt 536  Q
    ||||||||| |||||| ||||||| || |||||| ||||||| |||||| ||| |||||||||  || |||||||||||| |||||||  | ||||||||    
T  25350211 ttccaaaagattagaaattttcttaaa-caagattatttctacggaccacctcaacaaacaacactgcaggaggaacacccaaatcgaaaagcagcttgt 25350309  T
Q  537 cgtc 540  Q
    ||||    
T  25350310 cgtc 25350313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 439 - 540
Target Start/End: Original strand, 25355905 - 25356007
Alignment:
Q  439 ttccaaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaaacaac--tgtaggaggaacacctaaatcgagtaacagcttgt 536  Q
    ||||||||| |||||| ||||||| || |||||| ||||||| |||||| ||| |||||||||  || |||||||||||| |||||||  | ||||||||    
T  25355905 ttccaaaagattagaaattttcttaaa-caagattatttctacggaccacctcaacaaacaacactgcaggaggaacacccaaatcgaaaagcagcttgt 25356003  T
Q  537 cgtc 540  Q
    ||||    
T  25356004 cgtc 25356007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 9151458 - 9151415
Alignment:
Q  107 tagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  9151458 tagttacaaacccgtgcttcgcacgggttgaataacgtattttt 9151415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 12960649 - 12960607
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  12960649 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 12960607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 17817762 - 17817716
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatttt 149  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||    
T  17817762 aaactagttacaaacccgtgcttcgcacgggttgaataacgtgtttt 17817716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 24682277 - 24682323
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  24682277 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 24682323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 27732952 - 27732998
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  27732952 aactagttacaaacccgtgcttcgcactggttgaataacgtattttt 27732998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 4850494 - 4850449
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| |||||||||||| || |||||||    
T  4850494 actagttacaaacccgtgcttcacacgggttgaataacatattttt 4850449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 17172935 - 17172890
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||    
T  17172935 actagttacaaacccgtgcttcgcacggattgaataacgtattttt 17172890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 501
Target Start/End: Original strand, 25350319 - 25350400
Alignment:
Q  420 atacatgccagcgtacaatttccaaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaaacaac 501  Q
    |||||||||| | ||||| | ||||| | |||||||||||||||||||||||| ||||||| | |||| ||| | |||||||    
T  25350319 atacatgccaacatacaactgccaaaggattagaacttttcttcaagcaagattatttctacgaaccacctcaataaacaac 25350400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 501
Target Start/End: Original strand, 25356013 - 25356094
Alignment:
Q  420 atacatgccagcgtacaatttccaaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaaacaac 501  Q
    |||||||||| | ||||| | ||||| | |||||||||||||||||||||||| ||||||| | |||| ||| | |||||||    
T  25356013 atacatgccaacatacaactgccaaaggattagaacttttcttcaagcaagattatttctacgaaccacctcaataaacaac 25356094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 44806619 - 44806574
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||    
T  44806619 actagttacaaatccgtgcttcgcactggttgaattacgtattttt 44806574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 272588 - 272628
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattac 142  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  272588 caaactagttacaaatccgtgcttcgcacgggttgaattac 272628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 9226019 - 9226055
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||||| ||||||||||||    
T  9226019 aaactagttacaaacccgtgcttcgcacgggttgaat 9226055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 49023357 - 49023321
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaa 138  Q
    ||||||||||||||||||||||||| |||||||||||    
T  49023357 caaactagttacaaacccgtgcttcgcacgggttgaa 49023321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 25731169 - 25731126
Alignment:
Q  107 tagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||| |||||||| |||||||| ||||||||||||||    
T  25731169 tagttacaaactcgtgcttcgcacgggttaaattacgtattttt 25731126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 139
Target Start/End: Original strand, 38434277 - 38434312
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaat 139  Q
    ||||||||||||||||||||||| ||||||||||||    
T  38434277 aactagttacaaacccgtgcttcgcacgggttgaat 38434312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 7854965 - 7855011
Alignment:
Q  105 actagttacaaacccgtg-cttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||||    
T  7854965 actagttacaaacccgtggcttcgcacgggttgaataacgtattttt 7855011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 15595466 - 15595432
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||| ||||||||||||    
T  15595466 actagttacaaacccgtgcttcgcacgggttgaat 15595432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 23476587 - 23476621
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||| ||||||||||||    
T  23476587 actagttacaaacccgtgcttcacacgggttgaat 23476621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 27840556 - 27840514
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  27840556 aactagttacaaacccgtgctttgcacgggttgaataacgtat 27840514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 29469260 - 29469214
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||| ||||||||||||  |||||||||||| ||||||||||    
T  29469260 aactagttataaacccgtgctttgcacgggttgaataacgtattttt 29469214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 19049240 - 19049285
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtatttt 149  Q
    |||||||||||||||||| |||| |||||||||||| |||| ||||    
T  19049240 aactagttacaaacccgtacttcgcacgggttgaataacgtgtttt 19049285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 47573331 - 47573372
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgt 144  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  47573331 aaactagttacaaacccgtgcttcgcacgggttcaataacgt 47573372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 11834955 - 11834991
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  11834955 aaactagttccaaacccgtgcttcgcacgggttgaat 11834991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 21597942 - 21597978
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  21597942 aaactagttccaaacccgtgcttcgcacgggttgaat 21597978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 42996984 - 42996948
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  42996984 aaactagttacaaacccgtgcttcgcacaggttgaat 42996948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 48527407 - 48527457
Alignment:
Q  103 aaactagttacaaacccgtgc---ttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||   ||| |||||||||||| ||||||||||    
T  48527407 aaactagttacaaacccgtgcgaattcgcacgggttgaataacgtattttt 48527457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 29693431 - 29693384
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  29693431 aaactagttacaaacccgtgcttcgcacgggttgaattacgtattttt 29693384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 395 - 454
Target Start/End: Original strand, 47388909 - 47388968
Alignment:
Q  395 ttgtcatcgaaatattatacaaaatatacatgccagcgtacaatttccaaaagtttagaa 454  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  47388909 ttgtcattgaaatattatacaaaatatacatgccagaatacaatttccaaaagattagaa 47388968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 4894011 - 4893964
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  4894011 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 4893964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 10763631 - 10763584
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  10763631 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 10763584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 42682635 - 42682588
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  42682635 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 42682588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 29840689 - 29840735
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  29840689 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 29840735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 38896857 - 38896811
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  38896857 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 38896811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 52037390 - 52037436
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  52037390 aactagttacaaacccgtgcttcgcacgggttgaattatgtattttt 52037436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 1376025 - 1375978
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  1376025 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 1375978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 3929746 - 3929789
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  3929746 aaactagttacaaacccgtgcttcgcacgggttgaataacgtat 3929789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 19320419 - 19320466
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  19320419 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 19320466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 22194466 - 22194513
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  22194466 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 22194513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 28565428 - 28565471
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  28565428 aaactagttacaaacccgtgcttcgcacgggttgaataacgtat 28565471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 29184476 - 29184523
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  29184476 aaactagttacaaacccgtgcttcgcacggattgaataacgtattttt 29184523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 142
Target Start/End: Original strand, 48183174 - 48183213
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattac 142  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  48183174 aaactagttacaaacccgtgcttcgcacgggttgaattac 48183213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 24289200 - 24289246
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  24289200 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 24289246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 28573202 - 28573156
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  28573202 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 28573156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 33074231 - 33074277
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  33074231 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 33074277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 33363613 - 33363568
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||    
T  33363613 actagttacaaacccgtgcttcgcacggattgaataacgtattttt 33363568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 47137901 - 47137860
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgta 145  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  47137901 aactagttacaaacccgtgcttcgcacgggttgaataacgta 47137860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 28631854 - 28631818
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||||| ||||||||||||    
T  28631854 aaactagttacaaacccgtgcttcgcacgggttgaat 28631818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 23909714 - 23909749
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaa 138  Q
    |||||||||||||||||||||||| |||||||||||    
T  23909714 aaactagttacaaacccgtgcttcgcacgggttgaa 23909749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 24294910 - 24294867
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattt 148  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||    
T  24294910 actagttacaaacccgtgcttcgcacgggttcaataacgtattt 24294867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 44407336 - 44407293
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  44407336 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 44407293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 20767598 - 20767556
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||    
T  20767598 aactagttacaaacccgtgcttcgcacggcttgaataacgtat 20767556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 31620640 - 31620598
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||| |||||||| ||| |||||||    
T  31620640 actagttacaaacccgtgcttcgcacgggttcaataacgtatt 31620598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 46623376 - 46623422
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||| |||||||||| |||| ||||||| ||||||||||    
T  46623376 aactagttacaatcccgtgcttcgcacgagttgaataacgtattttt 46623422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 13662116 - 13662153
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  13662116 caaattagttacaaacccgtgcttcgcacgggttgaat 13662153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 45005749 - 45005717
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggtt 135  Q
    |||||||||||||||||||||||| ||||||||    
T  45005749 aaactagttacaaacccgtgcttcgcacgggtt 45005717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 50394966 - 50395006
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgt 144  Q
    ||||||||||||||||||||||| |||||||| ||| ||||    
T  50394966 aactagttacaaacccgtgcttcgcacgggttcaataacgt 50395006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 5483075 - 5483030
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  5483075 actagttacaaacccgtgcttcgcacgggttgaattacgtattttt 5483030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 580
Target Start/End: Original strand, 1967648 - 1967809
Alignment:
Q  420 atacatgccagcgtacaatttccaaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaaaca--actgtaggaggaacacct 517  Q
    |||||||| ||| ||||| || |||||| |||||||||||||| ||||||||| |||||||   |||| ||| |||||||  |||||| ||| || | |     
T  1967648 atacatgctagcatacaactttcaaaagattagaacttttcttgaagcaagattatttctacaaaccacctcaacaaacaacactgtatgagaaatatcc 1967747  T
Q  518 aaatcgagtaacagcttgtcgtcctcttgtaggtgattgtccctaacaaattggaaccaacca 580  Q
    |||| || ||||    |||| |||||||||||||| ||||||||||||||  |||||||||||    
T  1967748 aaattgaataactatgtgtcatcctcttgtaggtggttgtccctaacaaa-cggaaccaacca 1967809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 35707656 - 35707703
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  35707656 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 35707703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 2118233 - 2118187
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  2118233 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 2118187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 574177 - 574222
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  574177 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 574222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 534 - 579
Target Start/End: Original strand, 1967812 - 1967857
Alignment:
Q  534 tgtcgtcctcttgtaggtgattgtccctaacaaattggaaccaacc 579  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||    
T  1967812 tgtcgtcctcttgtaggtggttgtccctaacaaactggaaccaacc 1967857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 3759321 - 3759276
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  3759321 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 3759276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 12680630 - 12680675
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  12680630 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 12680675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 39713496 - 39713541
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  39713496 actagttacaaacccgtgcttcgcacgggttgaataacgtattttt 39713541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35534451 - 35534411
Alignment:
Q  1 tttactaatttaccaaaatacccctataagggcaaaatggt 41  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  35534451 tttactaatttaccaaaatacccctataaaggcaaaatggt 35534411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 5759384 - 5759341
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  5759384 aactagttacaaacccgtgcttcgcacgggttgaataacgtatt 5759341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 9887269 - 9887316
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  9887269 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 9887316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 142
Target Start/End: Original strand, 27892642 - 27892681
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattac 142  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  27892642 aaactagttacaaacccgtgcttcgcacgggttgaattac 27892681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 29713867 - 29713820
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  29713867 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 29713820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 39404590 - 39404637
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||| || |||||||    
T  39404590 aaactagttacaaacccgtgcttcgcacgggttgaataacatattttt 39404637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 8964876 - 8964830
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  8964876 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 8964830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 15650485 - 15650527
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  15650485 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 15650527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 16653237 - 16653191
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  16653237 aactagttacaaacccgtgctttgcacgggttgaataacgtattttt 16653191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 30527587 - 30527633
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  30527587 aactagttacaaacccgtgcttcgtacgggttgaataacgtattttt 30527633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 43014591 - 43014632
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  43014591 actagttacaaacccgtgcttcgcacgggttgaataacgtat 43014632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 2777265 - 2777221
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  2777265 aaactagttacaaacccgtgcttcgcacgggttcaataacgtatt 2777221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 22115352 - 22115396
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||||||||||| || ||| |||||||    
T  22115352 aaactagttacaaacccgtgcttcccacggattcaataacgtatt 22115396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 41983530 - 41983574
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  41983530 aaactagttacaaacccgtgcttcgcacgggttcaataacgtatt 41983574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 5271601 - 5271644
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  5271601 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 5271644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 8532265 - 8532222
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattt 148  Q
    |||||||||||| ||||||||| |||||||||||| ||||||||    
T  8532265 actagttacaaatccgtgcttcgcacgggttgaataacgtattt 8532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 146
Target Start/End: Complemental strand, 19591124 - 19591081
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||    
T  19591124 aaactagttacaaacccgtgcttcgcacgggtttaataacgtat 19591081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 21354006 - 21353963
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  21354006 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 21353963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 37352144 - 37352097
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  ||| |||||||| ||||||||||    
T  37352144 aaactagttacaaacccgtgctttgcacaggttgaataacgtattttt 37352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 37357043 - 37356996
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  ||| |||||||| ||||||||||    
T  37357043 aaactagttacaaacccgtgctttgcacaggttgaataacgtattttt 37356996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 51348110 - 51348063
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||| ||| |||||||||||| | ||||||||    
T  51348110 aaactagttacaaacccgtgtttcgcacgggttgaataatgtattttt 51348063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 147
Target Start/End: Original strand, 14828803 - 14828845
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||| |||||||| ||| |||||||    
T  14828803 actagttacaaacccgtgcttcgcacgggttcaataacgtatt 14828845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 1975435 - 1975398
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattac 142  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  1975435 actagttacaaacccatgcttcgcacgggttgaattac 1975398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 3839095 - 3839136
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||||| || ||||||||| ||||||    
T  3839095 actagttacaaacccgtgcttcgcaagggttgaataacgtat 3839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 15521112 - 15521071
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgt 144  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  15521112 aaactagttacaaacccgtgcttcgcacgggttcaataacgt 15521071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 16895991 - 16895950
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||| |||||| |||||||||||| ||||||    
T  16895991 actagttacaaacccatgcttcgcacgggttgaataacgtat 16895950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 28974053 - 28974008
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattt 148  Q
    |||||||||||||||||||||||| |||||||| ||| || |||||    
T  28974053 aaactagttacaaacccgtgcttcgcacgggttcaataacatattt 28974008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 36741797 - 36741845
Alignment:
Q  104 aactagttacaaacccgtgct--tcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||   || |||||||||||||||||||||||    
T  36741797 aactagttacaaacccgtgcgactcgcacgggttgaattacgtattttt 36741845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 56541807 - 56541766
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||| ||||||| |||||||||||| ||||||    
T  56541807 actagttacaaacctgtgcttcgcacgggttgaataacgtat 56541766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 443 - 536
Target Start/End: Original strand, 1967543 - 1967638
Alignment:
Q  443 aaaagtttagaacttttcttcaagcaagatcatttctaaggaccaactccacaaacaac--tgtaggaggaacacctaaatcgagtaacagcttgt 536  Q
    ||||| |||||| ||||||| ||||||||| ||||| | | ||||  || |||||||||  ||||||||||||||| ||||| | || ||||||||    
T  1967543 aaaagattagaaattttcttaaagcaagattatttcaacgaaccacgtcaacaaacaacactgtaggaggaacacccaaatcaaatagcagcttgt 1967638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 1975492 - 1975528
Alignment:
Q  2 ttactaatttaccaaaatacccctataagggcaaaat 38  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  1975492 ttactaatttaccaaaataaccccataagggcaaaat 1975528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 23479867 - 23479823
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||||| |||| ||| ||| |||||||    
T  23479867 aaactagttacaaacccgtgcttcgcacgagttcaataacgtatt 23479823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 24549455 - 24549419
Alignment:
Q  114 aaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  24549455 aaacccgtgcttcgcacgggttgaataacgtattttt 24549419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 38009251 - 38009207
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||| |||||||| |||||||| ||| |||||||    
T  38009251 aaactagttacaaacacgtgcttcacacgggttcaataacgtatt 38009207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 45003662 - 45003707
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  45003662 actagttacaaacccgtgcttcgcacgggttgaattacgtattttt 45003707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 30922096 - 30922139
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  30922096 aaactagttacaaacccgtgcttcacacgggttgaattacgtat 30922139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 42782717 - 42782670
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  42782717 aaactagttacaaacccgtgcttcacacgggttgaataacgtattttt 42782670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 4289027 - 4289073
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  4289027 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 4289073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 7364824 - 7364780
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||    
T  7364824 caaactagttacaaacccgtgcttcgcacgggttgaataacgtat 7364780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 15084296 - 15084343
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  15084296 aaactagttacaaactcgtgcttcgcacgggttgaattacatattttt 15084343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 28609996 - 28609949
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  28609996 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 28609949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 9542629 - 9542675
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||    
T  9542629 aactagttacaaacccgtgcttcgcacgggttgaataacatattttt 9542675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 9916707 - 9916752
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||    
T  9916707 actagttacaaacccgtgcttcgcacaggttgaataacgtattttt 9916752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 25123429 - 25123474
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||    
T  25123429 actagctacaaacccgtgcttcgcacgggctgaattacgtattttt 25123474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 142
Target Start/End: Original strand, 25124044 - 25124081
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattac 142  Q
    |||||||||||||||||||||| |||||||||||||||    
T  25124044 actagttacaaacccgtgcttcgcacgggttgaattac 25124081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 26828504 - 26828459
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||||    
T  26828504 caaactagttacaaacccgtgcttcgcacgggttcaataacgtatt 26828459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 44800696 - 44800651
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||||    
T  44800696 actagttacaaactcgtgcttcgcacgagttgaattacgtattttt 44800651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 33908235 - 33908191
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  33908235 aaactagttacaaacccgtgcttcgcacgggttcaataacgtatt 33908191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 1691425 - 1691460
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaa 138  Q
    |||||||||||||||||||||||| |||||||||||    
T  1691425 aaactagttacaaacccgtgcttcgcacgggttgaa 1691460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 5253337 - 5253294
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  5253337 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 5253294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 19488315 - 19488272
Alignment:
Q  107 tagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||    
T  19488315 tagttacaaacccgtgtttcgcacgggttgaataacgtattttt 19488272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 11707615 - 11707573
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||| |||||||| ||| |||||||    
T  11707615 actagttacaaacccgtgcttcgcacgggttcaataacgtatt 11707573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 19484616 - 19484662
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||| |||||||||||||| |||||||||||| || |||||||    
T  19484616 aactagttgcaaacccgtgcttcgcacgggttgaataacatattttt 19484662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 25573918 - 25573960
Alignment:
Q  106 ctagttacaaacccgtgcttcccacgggttgaattacgtattt 148  Q
    ||||||||||||||||||||| |||||||  ||||||||||||    
T  25573918 ctagttacaaacccgtgcttcgcacgggtgaaattacgtattt 25573960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 6342727 - 6342768
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgt 144  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  6342727 aaactagttacaaacccgtgcttcgcacgggtttaataacgt 6342768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 10874396 - 10874444
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||| |||||||||| |||| ||||||| || |||||||    
T  10874396 caaactagttacaatcccgtgcttcgcacgagttgaataacatattttt 10874444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 37224058 - 37224026
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggtt 135  Q
    |||||||||||||||||||||||| ||||||||    
T  37224058 aaactagttacaaacccgtgcttcgcacgggtt 37224026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 41053848 - 41053800
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  41053848 caaactagttacaaacccgtgcttcgcacgggttgaattacatattttt 41053800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 8396809 - 8396762
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  8396809 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 8396762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 22477949 - 22477902
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  22477949 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 22477902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 4137399 - 4137445
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  4137399 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 4137445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 35861044 - 35860998
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  35861044 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 35860998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 18688716 - 18688673
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  18688716 aactagttacaaacccgtgcttcgcacgggttgaataacgtatt 18688673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 26776432 - 26776479
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||| || |||||||    
T  26776432 aaactagttacaaacccgtgcttcgcacgggttgaataacatattttt 26776479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 42614239 - 42614282
Alignment:
Q  107 tagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  42614239 tagttacaaacccgtgcttcgcacgggttgaattacatattttt 42614282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 5241031 - 5240985
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatttt 149  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||    
T  5241031 aaactagttacaaacccgtgcttcgcacgggttgaataacgtgtttt 5240985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 11950990 - 11951036
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||||    
T  11950990 aactagttacaaacccatgcttcgcacgggttgaataacgtattttt 11951036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 26100777 - 26100823
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||||    
T  26100777 aactagttacaaacccgtgcttcgcacgggttgaataatgtattttt 26100823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 188777 - 188736
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  188777 actagttacaaacccgtgcttcgcacgggttgaataacgtat 188736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 44198166 - 44198203
Alignment:
Q  1 tttactaatttaccaaaatacccctataagggcaaaat 38  Q
    |||||||||||||||||||||| |||||||||||||||    
T  44198166 tttactaatttaccaaaatacctctataagggcaaaat 44198203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 50742339 - 50742294
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattt 148  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||||    
T  50742339 aaactagttacaaacccgtgcttcgcacgggttcaataacgtattt 50742294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 12001433 - 12001473
Alignment:
Q  111 tacaaacccgtgcttcccacgggttgaattacgtatttttc 151  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  12001433 tacaaacccgtgcttcgcacgggttgaataacgtatttttc 12001473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 139
Target Start/End: Original strand, 21165930 - 21165965
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaat 139  Q
    ||||||||||||||||||||||| ||||||||||||    
T  21165930 aactagttacaaacccgtgcttcgcacgggttgaat 21165965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 22522312 - 22522278
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||| ||||||||||||    
T  22522312 actagttacaaacccgtgcttcgcacgggttgaat 22522278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 138
Target Start/End: Original strand, 22759056 - 22759090
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaa 138  Q
    ||||||||||||||||||||||| |||||||||||    
T  22759056 aactagttacaaacccgtgcttcgcacgggttgaa 22759090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 24560111 - 24560157
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||| ||  |||||||||||| ||||||||||    
T  24560111 aactagttacaaacccgtgttttacacgggttgaataacgtattttt 24560157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 39576575 - 39576533
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||| |||| ||||||| |||||||    
T  39576575 actagttacaaacccgtgcttcgcacgagttgaataacgtatt 39576533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 55290396 - 55290442
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||| |||||||  ||||||||||| ||||||||||    
T  55290396 aactagttacaaacctgtgcttcgtacgggttgaataacgtattttt 55290442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 16496421 - 16496384
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  16496421 caaattagttacaaacccgtgcttcgcacgggttgaat 16496384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 30766547 - 30766506
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||| ||||||| |||||||||||| ||||||    
T  30766547 actagttacaaacctgtgcttcgcacgggttgaataacgtat 30766506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 52843226 - 52843181
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||| |||| ||||||| | ||||||||    
T  52843226 actagttacaaacccgtgcttcgcacgagttgaataatgtattttt 52843181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 52852741 - 52852786
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||| |||||||| |||||||| ||| |||||||    
T  52852741 caaactagttacaaactcgtgcttcgcacgggttcaataacgtatt 52852786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 15315271 - 15315315
Alignment:
Q  103 aaactagttacaaacccgtgc-ttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||||    
T  15315271 aaactagttacaaacccgtgctttcgcacgggttgaataacgtat 15315315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 19893178 - 19893214
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    ||||||||||||||||||||||||  |||||||||||    
T  19893178 aaactagttacaaacccgtgcttcatacgggttgaat 19893214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 52462214 - 52462258
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattt 148  Q
    ||||||||||||| ||||||||| |||||||| ||| ||||||||    
T  52462214 aactagttacaaatccgtgcttcgcacgggttcaataacgtattt 52462258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 54934777 - 54934745
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggtt 135  Q
    |||||||||||||||||||||||| ||||||||    
T  54934777 aaactagttacaaacccgtgcttcgcacgggtt 54934745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 14691 - 14644
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  14691 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 14644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 17400 - 17446
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  17400 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttt 17446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 24916 - 24960
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||    
T  24916 caaactagttacaaacccgtgcttcgcacgggttgaataacgtat 24960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 55604 - 55556
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  55604 caaactagttacaaacccgtgcttcgcacgagttgaataacgtattttt 55556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 61754 - 61720
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||| ||||||||||||    
T  61754 actagttacaaacccgtgcttcgcacgggttgaat 61720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 8174 - 8221
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||| |||||||||||| || |||||||    
T  8174 aaactagttacaaacccgtgcttcgcacgggttgaataacatattttt 8221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 11275 - 11228
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  11275 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttt 11228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 146
Target Start/End: Complemental strand, 13066 - 13023
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  13066 aaactagttacaaacccgtgcttcgcacgggttgaataacgtat 13023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5226 - 5189
Alignment:
Q  1 tttactaatttaccaaaatacccctataagggcaaaat 38  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  5226 tttactaatttaccaaaatacccttctaagggcaaaat 5189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 139617 - 139571
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtattttt 150  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||    
T  139617 aactagttacaaactcgtgtttcgcacgggttgaattacgtattttt 139571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 2707 - 2751
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||    
T  2707 aaactagttacaaacccgtgcttcacacgggttcaataacgtatt 2751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 52691 - 52727
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||||||||||||||||| ||||||||||||    
T  52691 aaactagttacaaacccgtgcttcgcacgggttgaat 52727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 29638 - 29681
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  29638 aactagttacaaacccgtgcttcgcacgggttcaataacgtatt 29681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 147
Target Start/End: Original strand, 25614 - 25656
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||| |||||||| ||| |||||||    
T  25614 actagttacaaacccgtgcttcgcacgggttcaataacgtatt 25656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 143213 - 143255
Alignment:
Q  104 aactagttacaaacccgtgcttcccacgggttgaattacgtat 146  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||    
T  143213 aactagttacaaacccgtgcttcgcacaggttgaataacgtat 143255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 10906 - 10864
Alignment:
Q  105 actagttacaaacccgtgcttcccacgggttgaattacgtatt 147  Q
    |||||||||||||||||||||| |||||||| ||| |||||||    
T  10906 actagttacaaacccgtgcttcgcacgggttcaataacgtatt 10864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 151878 - 151915
Alignment:
Q  102 caaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  151878 caaattagttacaaacccgtgcttcgcacgggttgaat 151915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 64401 - 64437
Alignment:
Q  103 aaactagttacaaacccgtgcttcccacgggttgaat 139  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  64401 aaactagttataaacccgtgcttcgcacgggttgaat 64437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University