View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14813_high_3 (Length: 663)

Name: NF14813_high_3
Description: NF14813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14813_high_3
NF14813_high_3
[»] chr2 (46 HSPs)
chr2 (18-389)||(45132116-45132491)
chr2 (467-646)||(45133055-45133234)
chr2 (25-182)||(45105836-45105993)
chr2 (490-578)||(44219117-44219205)
chr2 (301-382)||(28668989-28669070)
chr2 (301-389)||(30466823-30466911)
chr2 (301-384)||(11941208-11941291)
chr2 (301-375)||(36242319-36242393)
chr2 (301-382)||(35171916-35171997)
chr2 (301-382)||(44946053-44946134)
chr2 (304-389)||(4852649-4852733)
chr2 (301-382)||(15038075-15038156)
chr2 (301-389)||(25293274-25293363)
chr2 (305-390)||(44929838-44929923)
chr2 (301-382)||(31778147-31778228)
chr2 (301-382)||(33827573-33827654)
chr2 (302-382)||(34516414-34516493)
chr2 (301-389)||(41329958-41330046)
chr2 (314-382)||(43374330-43374398)
chr2 (315-382)||(18692090-18692157)
chr2 (301-374)||(8259013-8259086)
chr2 (321-382)||(41314127-41314188)
chr2 (301-382)||(4567429-4567518)
chr2 (301-369)||(19849949-19850017)
chr2 (315-382)||(2140486-2140553)
chr2 (315-382)||(19054156-19054223)
chr2 (308-382)||(14486948-14487022)
chr2 (301-382)||(3943856-3943937)
chr2 (379-420)||(45132967-45133008)
chr2 (303-375)||(5394135-5394207)
chr2 (302-382)||(6714295-6714375)
chr2 (302-382)||(44610156-44610236)
chr2 (316-375)||(18976462-18976521)
chr2 (301-363)||(44976172-44976235)
chr2 (301-382)||(24196120-24196199)
chr2 (321-382)||(27269344-27269405)
chr2 (301-373)||(4769282-4769354)
chr2 (303-363)||(32845194-32845254)
chr2 (303-382)||(36390569-36390647)
chr2 (308-382)||(28194138-28194212)
chr2 (321-382)||(8192352-8192413)
chr2 (321-382)||(39957894-39957955)
chr2 (315-375)||(13747507-13747567)
chr2 (312-384)||(17324892-17324963)
chr2 (346-382)||(27290735-27290771)
chr2 (301-389)||(29361665-29361752)
[»] chr1 (49 HSPs)
chr1 (477-646)||(42226220-42226389)
chr1 (301-381)||(34778455-34778535)
chr1 (301-384)||(24122139-24122222)
chr1 (301-382)||(4621237-4621318)
chr1 (301-381)||(17935885-17935965)
chr1 (301-389)||(24674509-24674597)
chr1 (301-382)||(9500355-9500436)
chr1 (301-382)||(48699875-48699956)
chr1 (302-374)||(8779744-8779816)
chr1 (303-382)||(7766727-7766806)
chr1 (303-389)||(26513141-26513226)
chr1 (301-382)||(15059402-15059483)
chr1 (302-375)||(21726846-21726919)
chr1 (304-389)||(36155881-36155966)
chr1 (301-389)||(45331614-45331703)
chr1 (301-382)||(27454864-27454947)
chr1 (301-381)||(37351454-37351533)
chr1 (302-360)||(12876958-12877016)
chr1 (301-382)||(7197247-7197328)
chr1 (301-382)||(8254752-8254833)
chr1 (301-380)||(8077763-8077841)
chr1 (303-382)||(18533724-18533803)
chr1 (303-382)||(22909989-22910068)
chr1 (321-384)||(23041658-23041721)
chr1 (301-375)||(1379014-1379087)
chr1 (301-382)||(33905510-33905591)
chr1 (301-382)||(50202662-50202742)
chr1 (303-382)||(7578527-7578606)
chr1 (312-382)||(27159212-27159282)
chr1 (301-375)||(32930865-32930939)
chr1 (302-340)||(37047109-37047147)
chr1 (332-389)||(5315478-5315535)
chr1 (301-382)||(30677292-30677373)
chr1 (383-420)||(42226116-42226153)
chr1 (302-375)||(45859050-45859123)
chr1 (303-382)||(23734234-23734314)
chr1 (303-382)||(23741426-23741506)
chr1 (316-372)||(43769975-43770031)
chr1 (315-382)||(1486550-1486617)
chr1 (303-374)||(2272462-2272533)
chr1 (336-382)||(14603947-14603993)
chr1 (303-389)||(26820305-26820391)
chr1 (308-369)||(16899626-16899687)
chr1 (304-373)||(26608301-26608370)
chr1 (301-382)||(32729660-32729741)
chr1 (315-384)||(35138118-35138187)
chr1 (321-374)||(52135262-52135315)
chr1 (301-353)||(2537809-2537861)
chr1 (318-374)||(40145889-40145945)
[»] chr6 (27 HSPs)
chr6 (301-389)||(9690631-9690719)
chr6 (301-390)||(9844054-9844143)
chr6 (301-382)||(1345051-1345132)
chr6 (301-382)||(15360098-15360179)
chr6 (301-382)||(21982321-21982401)
chr6 (301-382)||(34147462-34147543)
chr6 (301-382)||(34160078-34160159)
chr6 (301-381)||(9239091-9239171)
chr6 (301-382)||(654146-654227)
chr6 (301-382)||(11448987-11449068)
chr6 (302-382)||(11007282-11007362)
chr6 (302-382)||(14212999-14213079)
chr6 (303-382)||(3222636-3222714)
chr6 (301-382)||(28672183-28672264)
chr6 (301-389)||(15730488-15730576)
chr6 (303-382)||(5360071-5360150)
chr6 (303-382)||(21148511-21148589)
chr6 (304-373)||(33718478-33718547)
chr6 (304-382)||(11841020-11841097)
chr6 (301-389)||(9208368-9208456)
chr6 (301-360)||(12390541-12390600)
chr6 (304-382)||(14504082-14504160)
chr6 (301-389)||(33499591-33499679)
chr6 (303-382)||(17081054-17081133)
chr6 (301-380)||(17149458-17149537)
chr6 (301-375)||(17706326-17706400)
chr6 (301-374)||(28741849-28741922)
[»] chr3 (52 HSPs)
chr3 (301-382)||(10083819-10083900)
chr3 (301-389)||(49258255-49258343)
chr3 (301-382)||(10190742-10190823)
chr3 (301-382)||(8097279-8097360)
chr3 (301-390)||(48104993-48105082)
chr3 (301-389)||(18176880-18176968)
chr3 (301-389)||(21363059-21363147)
chr3 (301-389)||(39041845-39041933)
chr3 (301-382)||(40133449-40133530)
chr3 (301-389)||(35493027-35493115)
chr3 (303-389)||(24407379-24407465)
chr3 (301-382)||(8456150-8456231)
chr3 (301-382)||(25289715-25289795)
chr3 (301-374)||(25379877-25379950)
chr3 (301-382)||(26174229-26174310)
chr3 (301-382)||(32151540-32151621)
chr3 (301-382)||(34492575-34492656)
chr3 (301-382)||(45272416-45272497)
chr3 (301-382)||(46576464-46576545)
chr3 (301-389)||(54475797-54475885)
chr3 (302-389)||(33398461-33398548)
chr3 (301-384)||(52821634-52821716)
chr3 (301-375)||(30257740-30257814)
chr3 (301-382)||(15566500-15566580)
chr3 (301-382)||(24165715-24165795)
chr3 (301-382)||(45529755-45529835)
chr3 (301-382)||(48977504-48977585)
chr3 (301-382)||(53233911-53233991)
chr3 (301-382)||(53424177-53424257)
chr3 (321-389)||(4048086-4048154)
chr3 (315-374)||(4252404-4252463)
chr3 (311-382)||(8958035-8958106)
chr3 (311-386)||(50731233-50731308)
chr3 (311-386)||(50781546-50781621)
chr3 (303-382)||(52455649-52455728)
chr3 (315-382)||(53848434-53848501)
chr3 (301-382)||(30807153-30807234)
chr3 (301-374)||(55371302-55371375)
chr3 (321-384)||(7485529-7485591)
chr3 (302-384)||(4462750-4462831)
chr3 (301-382)||(1178288-1178367)
chr3 (301-389)||(31537831-31537919)
chr3 (303-382)||(40940943-40941022)
chr3 (317-382)||(14997742-14997807)
chr3 (316-389)||(25017620-25017692)
chr3 (301-382)||(25344058-25344138)
chr3 (334-382)||(3747730-3747778)
chr3 (303-382)||(2511297-2511376)
chr3 (308-375)||(26158934-26159001)
chr3 (301-382)||(33698706-33698787)
chr3 (303-364)||(51532907-51532968)
chr3 (330-382)||(32094757-32094809)
[»] scaffold0217 (1 HSPs)
scaffold0217 (301-389)||(7302-7390)
[»] chr8 (41 HSPs)
chr8 (301-389)||(21603350-21603438)
chr8 (301-382)||(2639411-2639492)
chr8 (301-382)||(4718765-4718846)
chr8 (301-382)||(10292174-10292255)
chr8 (301-390)||(28193594-28193683)
chr8 (301-382)||(42328124-42328205)
chr8 (301-382)||(8765526-8765607)
chr8 (305-382)||(32879403-32879480)
chr8 (301-382)||(34237655-34237736)
chr8 (301-382)||(39349376-39349457)
chr8 (301-389)||(18128633-18128721)
chr8 (301-382)||(2618306-2618387)
chr8 (301-382)||(3734623-3734704)
chr8 (301-382)||(20306028-20306109)
chr8 (301-382)||(21092661-21092742)
chr8 (301-389)||(6953001-6953088)
chr8 (301-375)||(1219469-1219543)
chr8 (308-382)||(33747009-33747083)
chr8 (301-382)||(4698723-4698804)
chr8 (301-382)||(14633074-14633155)
chr8 (301-381)||(15259407-15259487)
chr8 (301-389)||(20470037-20470124)
chr8 (307-383)||(42643117-42643193)
chr8 (301-382)||(19471729-19471811)
chr8 (301-382)||(19542653-19542735)
chr8 (301-382)||(19589961-19590043)
chr8 (301-389)||(264393-264480)
chr8 (301-389)||(651441-651528)
chr8 (301-389)||(837176-837263)
chr8 (301-381)||(7557952-7558031)
chr8 (301-389)||(25248468-25248554)
chr8 (301-374)||(28964153-28964225)
chr8 (301-382)||(34610687-34610768)
chr8 (301-341)||(24999354-24999394)
chr8 (318-382)||(33534567-33534631)
chr8 (308-383)||(13579902-13579977)
chr8 (336-382)||(9713609-9713655)
chr8 (303-373)||(28088408-28088478)
chr8 (302-372)||(43817759-43817829)
chr8 (321-382)||(34639208-34639269)
chr8 (316-384)||(2166831-2166899)
[»] chr5 (47 HSPs)
chr5 (301-389)||(34310258-34310346)
chr5 (301-375)||(35425129-35425203)
chr5 (301-382)||(8484661-8484742)
chr5 (304-389)||(22693054-22693139)
chr5 (301-382)||(27498731-27498812)
chr5 (301-375)||(33709510-33709584)
chr5 (301-382)||(18207323-18207404)
chr5 (301-389)||(9659304-9659392)
chr5 (301-382)||(4603893-4603974)
chr5 (301-389)||(11926494-11926583)
chr5 (303-384)||(13659243-13659324)
chr5 (301-382)||(15641106-15641186)
chr5 (301-382)||(19456211-19456291)
chr5 (301-382)||(32059440-32059521)
chr5 (313-382)||(38630979-38631048)
chr5 (301-389)||(23270515-23270603)
chr5 (303-382)||(7085626-7085705)
chr5 (301-382)||(10869565-10869646)
chr5 (301-374)||(13038463-13038536)
chr5 (301-382)||(22392804-22392885)
chr5 (301-382)||(30485944-30486025)
chr5 (301-382)||(41351104-41351184)
chr5 (303-374)||(13108458-13108529)
chr5 (303-382)||(21236362-21236441)
chr5 (301-375)||(38684324-38684397)
chr5 (301-382)||(5049253-5049333)
chr5 (321-382)||(37495190-37495251)
chr5 (301-389)||(34049927-34050015)
chr5 (321-384)||(27487552-27487615)
chr5 (303-382)||(31287946-31288025)
chr5 (301-375)||(11464915-11464988)
chr5 (315-384)||(19145410-19145479)
chr5 (301-389)||(6014273-6014361)
chr5 (321-389)||(25750606-25750674)
chr5 (303-389)||(10399891-10399978)
chr5 (331-382)||(10631289-10631340)
chr5 (301-374)||(36954934-36955007)
chr5 (316-373)||(42193614-42193671)
chr5 (302-382)||(31206360-31206440)
chr5 (316-371)||(5067392-5067447)
chr5 (321-390)||(930478-930547)
chr5 (301-382)||(8821100-8821181)
chr5 (329-382)||(25548534-25548587)
chr5 (301-382)||(26009264-26009345)
chr5 (325-382)||(28614486-28614543)
chr5 (302-334)||(12647829-12647861)
chr5 (323-375)||(38086361-38086413)
[»] chr7 (48 HSPs)
chr7 (301-382)||(22120008-22120089)
chr7 (301-382)||(40542910-40542991)
chr7 (301-389)||(3851877-3851965)
chr7 (301-389)||(17196943-17197031)
chr7 (301-382)||(2751391-2751472)
chr7 (301-382)||(7275397-7275478)
chr7 (301-382)||(16374114-16374195)
chr7 (301-382)||(21835271-21835352)
chr7 (301-382)||(23092216-23092297)
chr7 (301-382)||(42913513-42913594)
chr7 (301-389)||(18044227-18044315)
chr7 (301-382)||(11997969-11998050)
chr7 (301-382)||(22703606-22703687)
chr7 (302-382)||(21217833-21217913)
chr7 (302-382)||(31197711-31197791)
chr7 (303-382)||(27312274-27312353)
chr7 (301-382)||(654705-654785)
chr7 (301-374)||(7175870-7175943)
chr7 (301-382)||(29861790-29861871)
chr7 (301-382)||(31712902-31712983)
chr7 (301-369)||(9683946-9684014)
chr7 (301-389)||(36772296-36772384)
chr7 (301-375)||(25102816-25102889)
chr7 (301-382)||(2344419-2344500)
chr7 (301-382)||(23012508-23012589)
chr7 (301-381)||(22638408-22638488)
chr7 (301-389)||(39145645-39145732)
chr7 (301-389)||(41907507-41907594)
chr7 (302-389)||(11909947-11910034)
chr7 (303-389)||(27009481-27009568)
chr7 (304-375)||(43785306-43785377)
chr7 (303-381)||(19421353-19421431)
chr7 (301-359)||(21373830-21373888)
chr7 (308-382)||(21574102-21574176)
chr7 (303-389)||(25333525-25333610)
chr7 (312-382)||(28089950-28090020)
chr7 (301-382)||(2103175-2103254)
chr7 (301-381)||(32849711-32849791)
chr7 (303-382)||(22643342-22643421)
chr7 (301-382)||(10091308-10091388)
chr7 (333-390)||(22696473-22696530)
chr7 (301-389)||(28950991-28951079)
chr7 (301-375)||(17212173-17212247)
chr7 (308-382)||(28647096-28647170)
chr7 (301-343)||(40332193-40332235)
chr7 (301-382)||(31274034-31274114)
chr7 (301-353)||(23636594-23636646)
chr7 (331-375)||(36395496-36395540)
[»] chr4 (52 HSPs)
chr4 (301-382)||(34723915-34723996)
chr4 (301-382)||(34844758-34844839)
chr4 (301-382)||(40058852-40058933)
chr4 (301-381)||(52983735-52983815)
chr4 (301-382)||(5609202-5609283)
chr4 (301-382)||(45787704-45787785)
chr4 (301-382)||(19660532-19660613)
chr4 (301-382)||(27528795-27528876)
chr4 (301-390)||(33696271-33696360)
chr4 (303-384)||(51595140-51595221)
chr4 (302-382)||(46714510-46714590)
chr4 (303-382)||(32986315-32986394)
chr4 (301-367)||(32942486-32942552)
chr4 (321-382)||(23639760-23639821)
chr4 (321-382)||(23645418-23645479)
chr4 (301-374)||(32990551-32990624)
chr4 (301-374)||(54127350-54127423)
chr4 (301-369)||(13550324-13550392)
chr4 (301-389)||(20566466-20566554)
chr4 (303-375)||(55961761-55961832)
chr4 (306-373)||(4064981-4065048)
chr4 (301-380)||(20077986-20078065)
chr4 (303-382)||(44343632-44343711)
chr4 (301-375)||(51535736-51535811)
chr4 (301-383)||(1985952-1986032)
chr4 (301-374)||(27574434-27574507)
chr4 (303-389)||(35229285-35229372)
chr4 (321-384)||(52494624-52494687)
chr4 (303-373)||(9517650-9517720)
chr4 (315-389)||(33289184-33289258)
chr4 (317-375)||(37302619-37302677)
chr4 (322-375)||(43719094-43719147)
chr4 (306-382)||(9978509-9978585)
chr4 (321-389)||(12824536-12824604)
chr4 (303-382)||(36131510-36131589)
chr4 (301-363)||(4585732-4585792)
chr4 (301-382)||(21387487-21387566)
chr4 (321-375)||(30879173-30879227)
chr4 (301-382)||(22488028-22488109)
chr4 (331-375)||(13871325-13871369)
chr4 (322-389)||(7093508-7093575)
chr4 (319-382)||(23131436-23131499)
chr4 (320-375)||(37172900-37172955)
chr4 (307-389)||(25852337-25852419)
chr4 (301-382)||(4912042-4912123)
chr4 (301-382)||(18875517-18875597)
chr4 (301-374)||(49287974-49288046)
chr4 (99-147)||(1820548-1820596)
chr4 (99-147)||(1840803-1840851)
chr4 (321-389)||(17637845-17637912)
chr4 (303-343)||(22625100-22625140)
chr4 (330-382)||(55158343-55158395)
[»] scaffold0576 (1 HSPs)
scaffold0576 (301-382)||(5082-5163)
[»] scaffold0102 (1 HSPs)
scaffold0102 (301-382)||(39208-39289)
[»] scaffold0070 (1 HSPs)
scaffold0070 (301-382)||(40441-40521)
[»] scaffold0049 (1 HSPs)
scaffold0049 (301-389)||(66870-66958)
[»] scaffold0328 (2 HSPs)
scaffold0328 (303-389)||(13040-13126)
scaffold0328 (301-391)||(15107-15196)
[»] scaffold0051 (1 HSPs)
scaffold0051 (301-382)||(52871-52952)
[»] scaffold0623 (1 HSPs)
scaffold0623 (301-382)||(1057-1137)
[»] scaffold0366 (2 HSPs)
scaffold0366 (301-382)||(9300-9380)
scaffold0366 (301-364)||(12019-12081)
[»] scaffold0019 (1 HSPs)
scaffold0019 (301-382)||(161925-162006)
[»] scaffold1175 (1 HSPs)
scaffold1175 (301-389)||(2419-2507)
[»] scaffold0026 (1 HSPs)
scaffold0026 (303-389)||(97359-97445)
[»] scaffold0020 (1 HSPs)
scaffold0020 (316-390)||(123058-123131)
[»] scaffold0459 (1 HSPs)
scaffold0459 (301-382)||(10695-10774)
[»] scaffold0199 (1 HSPs)
scaffold0199 (321-382)||(8451-8512)
[»] scaffold0016 (1 HSPs)
scaffold0016 (301-382)||(32404-32484)
[»] scaffold0068 (1 HSPs)
scaffold0068 (301-374)||(41653-41725)
[»] scaffold0717 (1 HSPs)
scaffold0717 (302-339)||(1-38)


Alignment Details
Target: chr2 (Bit Score: 315; Significance: 1e-177; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 18 - 389
Target Start/End: Original strand, 45132116 - 45132491
Alignment:
Q  18 agaataatggaaaatgaggtactcattcagatgcactgtgagaaggaaaatgacattgagatcaaaatatataacgtgctagaaaatcttgatctctttg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45132116 agaataatggaaaatgaggtactcattcagatgcactgtgagaaggaaaatgacattgagatcaaaatatataacgtgctagaaaatcttgatctctttg 45132215  T
Q  118 tcactgctagcagtgtattggcttttgggacttcaactcttggctttactattgtcgctcaggtatgcattgcaatttgcatgagtttaatttcataaga 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  45132216 tcactgctagcagtgtattggcttttgggacttcaactcttggctttactattgtcgctcaggtatgcattgcaatttgcaagagtttaatttcataaca 45132315  T
Q  218 cattatgatattataagcattcaataaaccattcatttgttcctatgagcatagtttagttaataagaacattggatcc----ctccggctttaaacggg 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    ||| |||||||||||||    
T  45132316 cattatgatattataagcattcaataaaccattcatttgttcctatgagcatagtctagttaataagaacattggatccatagctctggctttaaacggg 45132415  T
Q  314 gcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||  |||||| ||||    
T  45132416 gcccccacaagtgggcagtaggattggtcctctcggattaatcgattcttggatcggatacctgattttaaaaaaa 45132491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 467 - 646
Target Start/End: Original strand, 45133055 - 45133234
Alignment:
Q  467 gcacaacacaccaccatcctccacaacacaaccgtcctccaccaccatcttcttcaccggcgctccctccattctcaaccaccatcgtcctcacccacca 566  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45133055 gcacaacacaccaccatcctccacaacacaaccgtcctccaccaccatcttcttcaccggcgctccctccattctcaaccaccatcgtcctcacccacca 45133154  T
Q  567 tcaatccgttcaaagctttcctctctcatgccgccgtcagaaacatccgcttctccctcaagttgcgagaaacccgttca 646  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45133155 tcaattcgttcaaagctttcctctctcacgccgccgtcagaaacatccgcttctccctcaagttgtgagaaacccgttca 45133234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 45105836 - 45105993
Alignment:
Q  25 tggaaaatgaggtactcattcagatgcactgtgagaaggaaaatgacattgagatcaaaatatataacgtgctagaaaatcttgatctctttgtcactgc 124  Q
    |||||||||| ||||||||| |||| || |||||||||||||||| |||||||||||||||||  ||  |||| ||||||||| ||||  ||||||||||    
T  45105836 tggaaaatgaagtactcattgagatccattgtgagaaggaaaatggcattgagatcaaaatattgaatttgcttgaaaatcttcatcttattgtcactgc 45105935  T
Q  125 tagcagtgtattggcttttgggacttcaactcttggctttactattgtcgctcaggta 182  Q
     |||||||||||  ||||||||| ||||||||||||||| |||||||| |||||||||    
T  45105936 cagcagtgtatttccttttgggaattcaactcttggcttcactattgttgctcaggta 45105993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 490 - 578
Target Start/End: Complemental strand, 44219205 - 44219117
Alignment:
Q  490 caacacaaccgtcctccaccaccatcttcttcaccggcgctccctccattctcaaccaccatcgtcctcacccaccatcaatccgttca 578  Q
    |||||| |||||| ||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  44219205 caacaccaccgtcttccaccaccgtcttcttcaccagcgctccctccattgtcaaccaccatcgtcctcacccgccatcaatctgttca 44219117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 28668989 - 28669070
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||| |||||||||||||| ||||||    
T  28668989 ggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggataccgagtttt 28669070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 30466911 - 30466823
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||| |||||||| ||||||| | ||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| ||||    
T  30466911 ggctttaaaccgggcccccgcaagtgggcagtgggattggtcccttcggattagtcgattcttggatcggataccgagttttaaaaaaa 30466823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 301 - 384
Target Start/End: Complemental strand, 11941291 - 11941208
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||    
T  11941291 ggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaa 11941208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 301 - 375
Target Start/End: Complemental strand, 36242393 - 36242319
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||||||||||||| |||| ||||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  36242393 ggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggatacc 36242319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 35171916 - 35171997
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| |||||||||| |||||||||| ||||||    
T  35171916 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 35171997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 44946134 - 44946053
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  44946134 ggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 44946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 4852649 - 4852733
Alignment:
Q  304 tttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||||||  |||||||||||||| ||||||||  ||||||||||||||||||||||||||| || |||||||| ||||    
T  4852649 tttaaacggggccccg-caagtggacggtggaattggtcccctcggattaatcgattcttggatcggatgccaagttttaaaaaaa 4852733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 15038075 - 15038156
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| |||||| ||||||| |||||||||||||||  || ||||| ||||||||||||||||||||| ||||||    
T  15038075 ggctttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagtttt 15038156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 25293274 - 25293363
Alignment:
Q  301 ggctttaaacggggccccca-caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||||||||||  ||||||| || ||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  25293274 ggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 25293363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 44929923 - 44929838
Alignment:
Q  305 ttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 390  Q
    ||||||||| ||||| |||||||||||||||||||||||  | | |||| ||||||||||||||||||||| |||||||| |||||    
T  44929923 ttaaacgggacccccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagttttaaaaaaat 44929838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 31778147 - 31778228
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||| || ||||| ||  ||||||||||||||||| ||||||    
T  31778147 ggctttaaatggggcccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 33827654 - 33827573
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||  ||||||| |||||||||||||||  | |||||| ||||||||||||||||||||| ||||||    
T  33827654 ggctttaaacgggacccctgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccgagtttt 33827573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 302 - 382
Target Start/End: Complemental strand, 34516493 - 34516414
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| ||||  ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  34516493 gctttaaacggg-cccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagtttt 34516414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 41329958 - 41330046
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||  || ||||| ||| |||||||| |||||||| |||||||| ||||    
T  41329958 ggctttaaatggggcccccacaagtgggcggtgagattggtcccctcagattagtcggttcttggaccggataccgagttttaaaaaaa 41330046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 43374398 - 43374330
Alignment:
Q  314 gcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||| ||||||  ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  43374398 gcccccgcaagtgagcggtgggattggtcccttcggattagtcgattcttggatcggataccgagtttt 43374330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 315 - 382
Target Start/End: Original strand, 18692090 - 18692157
Alignment:
Q  315 cccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| |||||||||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  18692090 cccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagtttt 18692157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 8259013 - 8259086
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    |||||||| |||||||||| ||||| | |||||||||| || | ||||||||| ||||||||||||||||||||    
T  8259013 ggctttaatcggggcccccgcaagtaggcggtgggattagttccttcggattagtcgattcttggatcggatac 8259086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Original strand, 41314127 - 41314188
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||||||||  || ||||||||||||||| ||||||||||| ||||||    
T  41314127 caagtggacggtgggattggtcccctcagattaatcgattcttcgatcggataccaagtttt 41314188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 4567518 - 4567429
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattg--------gtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||||||||||| |||||||||||        ||||| |||||||| || |||||||||||||||||| ||||||    
T  4567518 ggctttaaacggggcccccacaagtgggcggtgggattgtgggattggtcctctcggattagtcaattcttggatcggatacccagtttt 4567429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 369
Target Start/End: Original strand, 19849949 - 19850017
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcg 369  Q
    |||||||||| |||||||| ||||||| ||||| |||||||||| ||  ||||||||||||||||||||    
T  19849949 ggctttaaacagggcccccgcaagtgggcggtgagattggtcctctcaaattaatcgattcttggatcg 19850017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 315 - 382
Target Start/End: Complemental strand, 2140553 - 2140486
Alignment:
Q  315 cccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||| ||||||| |||||||||||||||  |||||||| |||||| |||||||||||||| ||||||    
T  2140553 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagtttt 2140486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 315 - 382
Target Start/End: Original strand, 19054156 - 19054223
Alignment:
Q  315 cccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||| ||||||| |||||||||||||||  |||||||| |||||||||||||| |||||| ||||||    
T  19054156 cccccgcaagtgggcggtgggattggtccgctcggattagtcgattcttggatcagataccgagtttt 19054223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 14486948 - 14487022
Alignment:
Q  308 aacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||  ||||||| |||||||||||||||  |||||||| ||| | ||||||||||||||| ||||||    
T  14486948 aacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 14487022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 3943856 - 3943937
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||| ||| |||||||  ||||||||||||||  | |||||| ||| || |||||||||||||| ||||||    
T  3943856 ggctttaaacggggctcccgcaagtgggtggtgggattggtccccttggattagtcggttattggatcggataccaagtttt 3943937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 45132967 - 45133008
Alignment:
Q  379 ttttaataaaatgtaagggcaatgttggtttttcagcagaaa 420  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  45132967 ttttaataaaatgtaagggcagtgttggtttttcagcagaaa 45133008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 303 - 375
Target Start/End: Original strand, 5394135 - 5394207
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||||| |||||| || ||||||| ||||||||||||||| ||||||||| ||| | ||| |||||||||||    
T  5394135 ctttaaatggggccgccgcaagtgggcggtgggattggtccgttcggattagtcggtccttagatcggatacc 5394207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 302 - 382
Target Start/End: Complemental strand, 6714375 - 6714295
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| | ||| ||||||||||||| |||||||||  ||  |||| ||||||||||||| ||||||| ||||||    
T  6714375 gctttaaacgggactcccgcaagtggacggtgagattggtcccctcaaattagtcgattcttggattggataccgagtttt 6714295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 302 - 382
Target Start/End: Original strand, 44610156 - 44610236
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||| ||||||||  ||||||| |||||||||||||||  |||||||| ||| |||||||| || ||||| ||||||    
T  44610156 gctttaaatggggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagtttt 44610236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 18976521 - 18976462
Alignment:
Q  316 ccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||| ||||||| |||||||||||||||  ||| |||| |||||||||||||||||||||    
T  18976521 ccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggatacc 18976462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 44976235 - 44976172
Alignment:
Q  301 ggctttaaacggggc-ccccacaagtggacggtgggattggtcctttcggattaatcgattctt 363  Q
    ||||||||||||||| |||| ||||||| ||||||||||| ||| ||||||||| |||||||||    
T  44976235 ggctttaaacggggctccccgcaagtgggcggtgggattgatcccttcggattagtcgattctt 44976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 24196120 - 24196199
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||  |||| ||||||| |||||||||||||||  |||||||| |||||| || ||| ||||||| ||||||    
T  24196120 ggctttaaacggg--ccccgcaagtgggcggtgggattggtcccctcggattagtcgattttttgattggataccgagtttt 24196199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 27269405 - 27269344
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||| ||||||||||| |||  |||||||| ||||||||||||| ||||||| ||||||    
T  27269405 caagtgggcggtgggattgatcccctcggattagtcgattcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 373
Target Start/End: Original strand, 4769282 - 4769354
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggata 373  Q
    |||||||||||||| |||| ||||||||||||| | |||||||  ||  |||| ||||||||| |||||||||    
T  4769282 ggctttaaacgggggccccgcaagtggacggtgaggttggtcccctcaaattagtcgattcttagatcggata 4769354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 32845194 - 32845254
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattctt 363  Q
    |||||||| |||||||  ||||||| ||||||||||||||| |||| |||| |||||||||    
T  32845194 ctttaaacagggcccctgcaagtgggcggtgggattggtcccttcgaattagtcgattctt 32845254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 36390647 - 36390569
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||| ||| ||||| ||||||| |||||||||||||||  |||||| | ||||| |||| |||||||||| ||||||    
T  36390647 ctttaaatgggacccccgcaagtgggcggtgggattggtcc-ctcggatcagtcgatacttgaatcggataccgagtttt 36390569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 28194212 - 28194138
Alignment:
Q  308 aacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| ||||| | ||||||||||||||   || ||||| ||| | ||||||||||||||| ||||||    
T  28194212 aacggggcccccgcaagtaggcggtgggattggtctcgtcagattagtcggtccttggatcggataccgagtttt 28194138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 8192413 - 8192352
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||| |||||||||||| ||  |||||||| ||| | ||||||||||||||| ||||||    
T  8192413 caagtgggcggtgggattgggcccctcggattagtcggtccttggatcggataccgagtttt 8192352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Original strand, 39957894 - 39957955
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||| || |||||||||| |  |||||||| ||||||||||||| ||||||| ||||||    
T  39957894 caagtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagtttt 39957955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 13747567 - 13747507
Alignment:
Q  315 cccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||||| ||||||||||||||||||| ||  || ||||  ||||| |||||||||||||||    
T  13747567 cccccagaagtggacggtgggattgggcccctcagatttgtcgatccttggatcggatacc 13747507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 384
Target Start/End: Original strand, 17324892 - 17324963
Alignment:
Q  312 gggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    |||||||||||||||| |||||||||| ||||  ||  |||| ||||||||| ||||||||| | ||||||||    
T  17324892 gggcccccacaagtgggcggtgggattagtcccctcaaattagtcgattctt-gatcggatatcgagttttaa 17324963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 27290735 - 27290771
Alignment:
Q  346 tcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  27290735 tcggattagtcgattcttggatcggataccgagtttt 27290771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 29361665 - 29361752
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||| |||||  ||||||| | ||||||||| ||   |||||||||| ||||| ||||||||||| | |||||||| ||||    
T  29361665 ggctttaaacggagccccg-caagtgggcagtgggattgatctcctcggattaattgattcctggatcggatatcgagttttaaaaaaa 29361752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 2e-45; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 477 - 646
Target Start/End: Original strand, 42226220 - 42226389
Alignment:
Q  477 ccaccatcctccacaacacaaccgtcctccaccaccatcttcttcaccggcgctccctccattctcaaccaccatcgtcctcacccaccatcaatccgtt 576  Q
    |||||||| ||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42226220 ccaccatcttccacaacaccgtcgtcctccaccacaatcttcttcaccggcgctccctccattctcaaccaccatcgtcctcacccaccatcaatccgtt 42226319  T
Q  577 caaagctttcctctctcatgccgccgtcagaaacatccgcttctccctcaagttgcgagaaacccgttca 646  Q
    ||||| |  ||||||||| ||| | ||| |  || | | ||||||||||| |||| ||||||||||||||    
T  42226320 caaagttggcctctctcacgccactgtctgcgacgtactcttctccctcacgttgtgagaaacccgttca 42226389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 301 - 381
Target Start/End: Original strand, 34778455 - 34778535
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 381  Q
    ||||||||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||||||||||| |||||    
T  34778455 ggctttaaacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 301 - 384
Target Start/End: Original strand, 24122139 - 24122222
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||    
T  24122139 ggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaa 24122222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 4621318 - 4621237
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||| |||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  4621318 ggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 4621237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 381
Target Start/End: Original strand, 17935885 - 17935965
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 381  Q
    ||||||||||||||||||| ||||||| || ||||||||||||  |||||||| ||||||||||||||||||||| |||||    
T  17935885 ggctttaaacggggcccccgcaagtgggcgatgggattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 24674509 - 24674597
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  ||| |||| ||||||||||||||||||||| | |||||| ||||    
T  24674509 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgaattttaaaaaaa 24674597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 9500436 - 9500355
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| |||||||||||||| ||||| ||||||||  ||||||||| ||||||||||||||||||| | ||||||    
T  9500436 ggctttaaacggagcccccacaagtgggcggtgagattggtctcttcggattagtcgattcttggatcggatatcgagtttt 9500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 48699875 - 48699956
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| |||||| ||||||| ||||||||||| ||| ||||||||| ||||||||||||||||||| | ||||||    
T  48699875 ggctttaaacggagcccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagtttt 48699956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 374
Target Start/End: Complemental strand, 8779816 - 8779744
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    |||||||||||||||||||||||| | |||||||||||||||  |||||||| ||||||||| ||||||||||    
T  8779816 gctttaaacggggcccccacaagtaggcggtgggattggtcccctcggattagtcgattcttagatcggatac 8779744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 7766806 - 7766727
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||| ||||||| |||||||||||||||  |||||||| |||||||||| |||||||| | ||||||    
T  7766806 ctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 7766727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 303 - 389
Target Start/End: Complemental strand, 26513226 - 26513141
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||| ||||||||||||| |||||||| ||||||  |||||||| ||||||||||||||| ||||| |||||||| ||||    
T  26513226 ctttaaacggg-cccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagttttaaaaaaa 26513141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 15059483 - 15059402
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||| |||| ||||||| ||||| |||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  15059483 ggctttaaacggggtccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 15059402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 302 - 375
Target Start/End: Original strand, 21726846 - 21726919
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||||||||||| ||||||||||||| ||||||| ||| |||  || |||||||||||||||||||||||||||    
T  21726846 gctttaaacgggtcccccacaagtgggcggtggggttgatcccctcagattaatcgattcttggatcggatacc 21726919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 36155966 - 36155881
Alignment:
Q  304 tttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||| |||||||| || |||| ||||||||||||||| |||  |||| ||||||||||||||||||||| |||||||| ||||    
T  36155966 tttaaacagggcccccgcaggtgggcggtgggattggtcccttcaaattagtcgattcttggatcggataccgagttttaaaaaaa 36155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 45331703 - 45331614
Alignment:
Q  301 ggctttaaacggggc-ccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||| |||| ||||||||||||||||||  |||  || |||||||||||||||| |||||||||| |||||||| ||||    
T  45331703 ggctttaaacggggctccccgcaagtggacggtgggattaatcccctcagattaatcgattcttgaatcggataccgagttttaaaaaaa 45331614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 27454947 - 27454864
Alignment:
Q  301 ggctttaaacggggcccccac--aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| |  | |||| |||||||||||||||  |||||||| ||||||||||||||||||||||||||||    
T  27454947 ggctttaaacgggccccccccgcatgtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacctagtttt 27454864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 381
Target Start/End: Complemental strand, 37351533 - 37351454
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 381  Q
    ||||||||||||| ||||||||||||| |||||||||||||||  |||||||| ||| | ||||||||||||||| |||||    
T  37351533 ggctttaaacggg-cccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 302 - 360
Target Start/End: Complemental strand, 12877016 - 12876958
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgatt 360  Q
    |||||||||||||||||| |||||||||||||||||||||||  |||||||||| ||||    
T  12877016 gctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattaatggatt 12876958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 7197328 - 7197247
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||| ||||||  ||||||| ||||| |||||||||  |||||||| ||||||| ||||||||||||| ||||||    
T  7197328 ggctttaaacgaggcccctgcaagtgggcggtgagattggtcccctcggattagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 8254833 - 8254752
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| ||||||||||| |||  | | |||| |||||||||| |||||||||| ||||||    
T  8254833 ggctttaaacggggcccccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaatcggataccgagtttt 8254752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 380
Target Start/End: Original strand, 8077763 - 8077841
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtt 380  Q
    |||||||||| |||||||| ||||||| |||||||||||||||  || |||||||||||| |||||||||| ||| ||||    
T  8077763 ggctttaaacagggcccccgcaagtgggcggtgggattggtcccctc-gattaatcgattattggatcggagaccgagtt 8077841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 18533803 - 18533724
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||  ||||||| | |||||||||||||  ||  |||||||||||||| ||||||||||| ||||||    
T  18533803 ctttaaacggggcccctgcaagtgggccgtgggattggtcccctcatattaatcgattcttagatcggataccaagtttt 18533724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 303 - 382
Target Start/End: Original strand, 22909989 - 22910068
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||| |||||| ||||||| |||||||||| ||||  |||||||| ||||| ||| ||||||||||| ||||||    
T  22909989 ctttaaacggagcccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagtttt 22910068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 321 - 384
Target Start/End: Original strand, 23041658 - 23041721
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    ||||||||| |||||||||||||  ||| |||| ||||||||||||||||||||| ||||||||    
T  23041658 caagtggacagtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttaa 23041721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 1379014 - 1379087
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||  || ||||| ||||||||| |||||||||||    
T  1379014 ggctttaaacggg-cccccgcaagtggacggtgagattggtcccctcagattagtcgattcttagatcggatacc 1379087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 33905591 - 33905510
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||| ||  |||||||||||||||||| |||  ||  ||| |||||||||| ||||||||||| ||||||    
T  33905591 ggctttaaacggggcctccgtaagtggacggtgggattgatcccctcaaatttatcgattctttgatcggataccgagtttt 33905510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 50202662 - 50202742
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||| | ||||||| |||||| ||||||||  |||||||||||||||||| ||||||||| | ||||||    
T  50202662 ggctttaaacgggaccctcgcaagtgggcggtggaattggtcccctcggattaatcgattctt-gatcggatatcgagtttt 50202742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 382
Target Start/End: Original strand, 7578527 - 7578606
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||| | |||||||  |||||||||||| |  |||||||| | |||| |||||||||||||| ||||||    
T  7578527 ctttaaacggggccctcgcaagtgggtggtgggattggttccctcggattagttgatttttggatcggataccgagtttt 7578606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 382
Target Start/End: Original strand, 27159212 - 27159282
Alignment:
Q  312 gggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||| |||||||||||||||||||||||  || ||||| |||||  |||||||||||| | ||||||    
T  27159212 gggcccccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagtttt 27159282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 32930865 - 32930939
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||||||||||||| |||  |||||||| |||||||||| |||  || ||||||||||||||| ||| |||||||    
T  32930865 ggctttaaacggggtccctgcaagtggatggtgggattgatcccctcagattaatcgattcttagattggatacc 32930939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 37047109 - 37047147
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattgg 340  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  37047109 gctttaaatggggcccccacaagtggacggtgggattgg 37047147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 5315478 - 5315535
Alignment:
Q  332 tgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||  |||||| | ||||||||||||||||||||| |||||||| ||||    
T  5315478 tgggattggtcccctcggataagtcgattcttggatcggataccgagttttaaaaaaa 5315535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 30677292 - 30677373
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| ||| ||||| ||||||| |||||||||||||||  || ||||| ||| |||||||| |||||| | ||||||    
T  30677292 ggctttaaatgggacccccgcaagtgggcggtgggattggtcccctcagattagtcggttcttggaccggatatcgagtttt 30677373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 42226116 - 42226153
Alignment:
Q  383 aataaaatgtaagggcaatgttggtttttcagcagaaa 420  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  42226116 aataaaatgtaagggcaatgttggtttttcaccagaaa 42226153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 302 - 375
Target Start/End: Complemental strand, 45859123 - 45859050
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||||||| |||||||| |||||||  ||| ||||||||||  |||||||| | |||| ||||||||||||||    
T  45859123 gctttaaacagggcccccgcaagtgggtggtaggattggtcccctcggattagttgattattggatcggatacc 45859050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 382
Target Start/End: Original strand, 23734234 - 23734314
Alignment:
Q  303 ctttaaacgggg-cccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| ||||| ||||||| |||||  ||||||||  || ||||| |||||||||| |||||||||| ||||||    
T  23734234 ctttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagtttt 23734314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 382
Target Start/End: Original strand, 23741426 - 23741506
Alignment:
Q  303 ctttaaacgggg-cccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| ||||| ||||||| |||||  ||||||||  || ||||| |||||||||| |||||||||| ||||||    
T  23741426 ctttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagtttt 23741506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 372
Target Start/End: Complemental strand, 43770031 - 43769975
Alignment:
Q  316 ccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggat 372  Q
    |||||||| ||| ||||||||||||||| |||| |||| |||||||| |||||||||    
T  43770031 ccccacaaatgggcggtgggattggtcccttcgaattagtcgattctaggatcggat 43769975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 315 - 382
Target Start/End: Original strand, 1486550 - 1486617
Alignment:
Q  315 cccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||| ||||||||||||||||| |||||  || ||||| ||| | ||||||||||||||| ||||||    
T  1486550 cccccgcaagtggacggtgggatcggtcccctccgattagtcggtccttggatcggataccgagtttt 1486617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 374
Target Start/End: Original strand, 2272462 - 2272533
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    |||||||||||||||| ||||| || |||| |||||| |||  |||||||| ||||||||  ||||||||||    
T  2272462 ctttaaacggggcccctacaagggggcggtaggattgatcccatcggattagtcgattctaagatcggatac 2272533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 382
Target Start/End: Original strand, 14603947 - 14603993
Alignment:
Q  336 attggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  14603947 attggtcccctcggattagtcgattcttggatcggataccgagtttt 14603993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 26820305 - 26820391
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||| ||| ||||  |||||||| ||||| |||| ||  ||||||||| ||||||||||||| | ||||| |||||||| ||||    
T  26820305 ctttaaatgggacccctgcaagtggatggtggaattgatcgcttcggattagtcgattcttggattgaataccgagttttaaaaaaa 26820391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 16899626 - 16899687
Alignment:
Q  308 aacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcg 369  Q
    |||||||||||  ||||||||||||| |||||||||  |||||||| ||| | |||||||||    
T  16899626 aacggggcccctgcaagtggacggtgagattggtcccctcggattagtcggtccttggatcg 16899687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 373
Target Start/End: Original strand, 26608301 - 26608370
Alignment:
Q  304 tttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggata 373  Q
    ||||||| || ||||||||||||    ||| |||||||||||| |||||| |||||| ||||||||||||    
T  26608301 tttaaacaggccccccacaagtgactagtgagattggtccttttggattagtcgattgttggatcggata 26608370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 32729660 - 32729741
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| |||| |||| ||||||| ||||||||||| |||  | |||||| ||| |  |||||||||||||| ||||||    
T  32729660 ggctttaaatggggtccccgcaagtgggcggtgggattgatccccttggattagtcggtctttggatcggataccgagtttt 32729741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 384
Target Start/End: Original strand, 35138118 - 35138187
Alignment:
Q  315 cccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    ||||| ||||||| ||||||||||| | |  |||||||| ||| | ||||||||||||||| ||||||||    
T  35138118 cccccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagttttaa 35138187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 374
Target Start/End: Original strand, 52135262 - 52135315
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    |||||||||||||||||||||||  ||  |||| ||| ||||||||||||||||    
T  52135262 caagtggacggtgggattggtcccctcatattagtcggttcttggatcggatac 52135315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 2537809 - 2537861
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggatta 353  Q
    ||||||||||||| ||||| ||||||| ||| |||||||||||  ||||||||    
T  2537809 ggctttaaacgggccccccgcaagtgggcggagggattggtcccctcggatta 2537861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 40145945 - 40145889
Alignment:
Q  318 ccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    ||||||||||  |||| | |||||||  |||||||| ||||||||||||||||||||    
T  40145945 ccacaagtgggtggtgagtttggtcccctcggattagtcgattcttggatcggatac 40145889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 9690719 - 9690631
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| ||||    
T  9690719 ggctttaaacggggccctcacaagtggacggtgggattggtcctctcggattagtcgattcttggatcggataccgagttttaaaaaaa 9690631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 9844054 - 9844143
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 390  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||| ||||||||| ||||||||||||||||||| | |||||| |||||||    
T  9844054 ggctttaaacggggccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggatatcgagttttcataaaat 9844143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 1345051 - 1345132
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| |||||||||||||||||||||||  | |||||| ||||||||||||||||||||| ||||||    
T  1345051 ggctttaaacgggccccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagtttt 1345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 15360179 - 15360098
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  15360179 ggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 15360098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 21982401 - 21982321
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  21982401 ggctttaaacggggcccccgcaagtgggcggtgggattggtcc-ctcggattagtcgattcttggatcggataccgagtttt 21982321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 34147462 - 34147543
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  34147462 ggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34147543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 34160078 - 34160159
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  34160078 ggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34160159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 381
Target Start/End: Original strand, 9239091 - 9239171
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 381  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||    
T  9239091 ggctttaaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 654227 - 654146
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||  |||||||| |||||| |||||||||||||| ||||||    
T  654227 ggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 11448987 - 11449068
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| |||||||||| |||||||| | ||||||    
T  11448987 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 382
Target Start/End: Original strand, 11007282 - 11007362
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||| |||||||||| ||||||| |||||||||||| ||  |||||||| ||||||||| ||||||||||||||||||    
T  11007282 gctttaagcggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattctttgatcggatacctagtttt 11007362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 382
Target Start/End: Original strand, 14212999 - 14213079
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| |||| |||||||  ||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  14212999 gctttaaacgggggccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagtttt 14213079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 3222714 - 3222636
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||  ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  3222714 ctttaaacggggccccg-caagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 3222636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 28672183 - 28672264
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||  |||||||| |||||||||||||| |||||| ||||||    
T  28672183 ggctttaaacgggcccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 15730576 - 15730488
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||| |||||||||| |||| ||||||||||||||   |||||||| ||||||||| ||||||||| | |||||||| ||||    
T  15730576 ggctttaaacgtggcccccacacgtgggcggtgggattggtcacctcggattagtcgattctttgatcggatatcgagttttaaaaaaa 15730488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 5360150 - 5360071
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||  ||||||||||||| |||||||||||||||  ||| |||| ||||||||| ||||||||||| ||||||    
T  5360150 ctttaaacggaacccccacaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 21148589 - 21148511
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||  ||||||| |||||||||||||||  |||||||| |||||||||| |||||||||| ||||||    
T  21148589 ctttaaacggggccccg-caagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 21148511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 304 - 373
Target Start/End: Complemental strand, 33718547 - 33718478
Alignment:
Q  304 tttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggata 373  Q
    ||||||||||||| |  ||||||||||||||||||| |||  |||||||| |||||||||||||||||||    
T  33718547 tttaaacggggcctctgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggata 33718478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 382
Target Start/End: Original strand, 11841020 - 11841097
Alignment:
Q  304 tttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||| | ||||||||||||||||| ||||  ||| |||| |||||| |||||||||||||| ||||||    
T  11841020 tttaaacggggcccc-ataagtggacggtgggattagtcccctcgaattagtcgattattggatcggataccgagtttt 11841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 9208368 - 9208456
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||   || || || ||||||||||||||  ||||| |||||||| ||||    
T  9208368 ggctttaaatggggcccccgcaagtgggcggtgggattggtctcctcagaatagtcgattcttggatcaaataccgagttttaaaaaaa 9208456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 12390541 - 12390600
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgatt 360  Q
    |||||||||| |||||||| ||||||| |||||||||||||||  |||||||| ||||||    
T  12390541 ggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgatt 12390600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 382
Target Start/End: Complemental strand, 14504160 - 14504082
Alignment:
Q  304 tttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||| |||| |||| ||||||| ||||||||||| |||| ||| |||| ||||| |||| |||||||||| ||||||    
T  14504160 tttaaatggggtccccgcaagtgggcggtgggattgatcctctcgaattagtcgatccttgtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 33499591 - 33499679
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||| ||| || |||||||||| |||||||||||||||  |||||||| ||  ||  |||| |||||||| |||||||| ||||    
T  33499591 ggctttaaatgggccctccacaagtgggcggtgggattggtcccctcggattagtcagttgatggaccggataccgagttttaaaaaaa 33499679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 17081133 - 17081054
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  ||| || | | | ||||||||||| ||||| ||||||    
T  17081133 ctttaaatggggcccccgcaagtgggcggtgggattggtcccctcgaataagttgtttcttggatcgaataccgagtttt 17081054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 380
Target Start/End: Complemental strand, 17149537 - 17149458
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtt 380  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||  ||| |||| ||| | |||| ||| |||||| ||||    
T  17149537 ggctttaaatggggcccccgcaagtgaacggtgggattggtcccctcgaattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 375
Target Start/End: Complemental strand, 17706400 - 17706326
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||||||||| |||||| | ||||||||||||| |||||||    |||||| | || ||||||||||||||||||    
T  17706400 ggctttaaactgggccctcgcaagtggacggtgtgattggtttcctcggataagtcaattcttggatcggatacc 17706326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 28741922 - 28741849
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    ||||| ||||||  ||||||||| |||| |||| |||||||||| ||| |||| ||| | ||||||||||||||    
T  28741922 ggcttaaaacggaacccccacaaatggatggtgtgattggtcctctcgaattagtcggtccttggatcggatac 28741849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 8e-29; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 10083900 - 10083819
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  10083900 ggctttaaacggggcccccacaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 10083819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 49258343 - 49258255
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  49258343 ggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 49258255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 10190823 - 10190742
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  10190823 ggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 10190742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 8097360 - 8097279
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  8097360 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 8097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 48104993 - 48105082
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 390  Q
    |||||||||| |||||||||||||||| ||||| ||||||||| ||||||||| ||||||||||||||||||||| ||||| || |||||    
T  48104993 ggctttaaacagggcccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagtttaaaaaaaat 48105082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 18176968 - 18176880
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||  |||||||| ||||    
T  18176968 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccatcggattagtcgattcttggatcggatacagagttttaaaaaaa 18176880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 21363059 - 21363147
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||| |||||| ||||||| ||||||||||||| |  |||||||||||||||||||||||||||||| |||||||| ||||    
T  21363059 ggctttaaacggagcccccgcaagtgggcggtgggattggttccctcggattaatcgattcttggatcggataccgagttttaaaaaaa 21363147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 39041933 - 39041845
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||| |||||||  ||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  39041933 ggctttaaacggggcccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttaaaaaaa 39041845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 40133530 - 40133449
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  40133530 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 40133449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 35493027 - 35493115
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||| | ||||| |||||||| ||||    
T  35493027 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggattgaataccgagttttaaaaaaa 35493115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 24407379 - 24407465
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||  | ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  24407379 ctttaaacggggccatcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 24407465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 8456231 - 8456150
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| | |||||||||||||  |||||||| |||||||||| |||||||||| ||||||    
T  8456231 ggctttaaacggggcccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 8456150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 25289795 - 25289715
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  25289795 ggctttaaacggggcccccgcaagtgggcggtgggattggtcc-ctcgaattagtcgattcttggatcggataccgagtttt 25289715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 25379877 - 25379950
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    ||||||||||||||||||| |||| || |||||||||||||||  |||||||| ||||||||||||||||||||    
T  25379877 ggctttaaacggggcccccgcaagcgggcggtgggattggtcccctcggattagtcgattcttggatcggatac 25379950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 26174229 - 26174310
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||  |||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  26174229 ggctttaaatagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 26174310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 32151540 - 32151621
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  32151540 ggctttaaacggggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 34492656 - 34492575
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||| | |||||||||||| |||||| ||||||    
T  34492656 ggctttaaacggggcccccgcaagtgggcggtgggattggtccattcagattagttgattcttggatctgataccgagtttt 34492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 45272497 - 45272416
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| | || |||||||||||||||| ||||||    
T  45272497 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagttgactcttggatcggataccgagtttt 45272416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 46576464 - 46576545
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||  | |||||| ||||||||||||||||||||| ||||||    
T  46576464 ggctttaaacggggcccccgcaagtgggcggtcggattggtccccttggattagtcgattcttggatcggataccgagtttt 46576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 54475797 - 54475885
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||||||| || ||||||| |||||||||||||||  | |||||| |||||||||||||| |||||| |||||||| ||||    
T  54475797 ggctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagttttaaaaaaa 54475885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 33398548 - 33398461
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||||||||| ||||||| ||||||||||||| |  ||| |||| ||||||||||||||||||||| | |||||| ||||    
T  33398548 gctttaaacggggcccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttggatcggataccgaattttaaaaaaa 33398461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 301 - 384
Target Start/End: Complemental strand, 52821716 - 52821634
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    ||||||||||||||||||   |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||    
T  52821716 ggctttaaacggggccccgt-aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaa 52821634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 30257740 - 30257814
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||||||| ||||||||| ||||||| |||||| ||||||||  |||||||| |||||||||||||||||||||    
T  30257740 ggctttaaatggggcccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggatacc 30257814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 15566580 - 15566500
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||  || ||||| ||||||||||||||||||||| ||||||    
T  15566580 ggctttaaacggg-cccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagtttt 15566500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 24165795 - 24165715
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||  ||||||| ||||||||||| |||  |||||||| ||||||||||||||||||||| ||||||    
T  24165795 ggctttaaacggggccccg-caagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagtttt 24165715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 45529835 - 45529755
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||    
T  45529835 ggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagtttt 45529755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 48977504 - 48977585
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||  ||||||| |||||||||||||||  |||||||| ||| | ||||||||||||||| ||||||    
T  48977504 ggctttaaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 48977585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 53233991 - 53233911
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||| |||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||    
T  53233991 ggctctaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagtttt 53233911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 53424257 - 53424177
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| ||||||  |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  53424257 ggctttaaacggg-cccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 53424177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 4048086 - 4048154
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||||||||||||||  |||||||| | ||||||||||||||||||| |||||||| ||||    
T  4048086 caagtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagttttaaaaaaa 4048154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 315 - 374
Target Start/End: Complemental strand, 4252463 - 4252404
Alignment:
Q  315 cccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    |||||||||||||||||||||||||||||  |||||||| ||||| ||||||||||||||    
T  4252463 cccccacaagtggacggtgggattggtcccctcggattagtcgatccttggatcggatac 4252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 382
Target Start/End: Complemental strand, 8958106 - 8958035
Alignment:
Q  311 ggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| ||||||| |||||||||||||||  || |||||||||||||||||||| |||||| ||||||    
T  8958106 ggggcccccgcaagtgggcggtgggattggtcccctctgattaatcgattcttggatcagataccgagtttt 8958035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 50731308 - 50731233
Alignment:
Q  311 ggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaata 386  Q
    ||||||| ||||||||| |||||||||||||||  || ||||| ||||| ||||||||||||||| ||||||||||    
T  50731308 ggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttttaata 50731233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 50781546 - 50781621
Alignment:
Q  311 ggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaata 386  Q
    ||||||| ||||||||| |||||||||||||||  || ||||| ||||| ||||||||||||||| ||||||||||    
T  50781546 ggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttttaata 50781621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 52455728 - 52455649
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||| ||||||   ||||||||||||||  |||||||| ||||||||||||| ||||||| ||||||    
T  52455728 ctttaaacggggcccccgcaagtgactggtgggattggtcccctcggattagtcgattcttggattggataccgagtttt 52455649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 315 - 382
Target Start/End: Complemental strand, 53848501 - 53848434
Alignment:
Q  315 cccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  53848501 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 53848434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 30807234 - 30807153
Alignment:
Q  301 ggctttaaacggggccccca-caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||||  ||||||| |||| |||||||||| | ||||||| ||||||||||||||||||||| ||||||    
T  30807234 ggctttaaacggggccccccgcaagtgggcggtaggattggtccct-cggattagtcgattcttggatcggataccgagtttt 30807153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 55371375 - 55371302
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    ||||| ||||||||||| | ||||||| |||||||||||||||  |||||||| ||||| ||||||||||||||    
T  55371375 ggcttaaaacggggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 321 - 384
Target Start/End: Complemental strand, 7485591 - 7485529
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    ||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||| ||||||||    
T  7485591 caagtggccggtgggattggtccct-cggattagtcgattcttggatcggataccgagttttaa 7485529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 302 - 384
Target Start/End: Original strand, 4462750 - 4462831
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    |||||||||||||||||  ||||||||||||||||||| |||  |||||||| |  |||||||||| ||||||| ||||||||    
T  4462750 gctttaaacggggccccg-caagtggacggtgggattgatccactcggattagtttattcttggattggataccgagttttaa 4462831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 1178288 - 1178367
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| |||||||| ||| |||| ||||||||||||||| | ||||||| |||| |||||||||||||||| ||||||    
T  1178288 ggctttaaatggggcccc-acacgtgggcggtgggattggtccct-cggattagtcgaatcttggatcggataccgagtttt 1178367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 31537919 - 31537831
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||| |||||  ||||||| ||||| |||||||||  ||| |||| || |||||||||||||||| | |||||||| ||||    
T  31537919 ggctttaaacggagcccctgcaagtgggcggtgagattggtcccctcgaattagtcaattcttggatcggatatcgagttttaaaaaaa 31537831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 382
Target Start/End: Original strand, 40940943 - 40941022
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||||||||||  ||| ||||||||||  ||| |||| || ||||||| ||| |||||| ||||||    
T  40940943 ctttaaacggggcccccacaagtgggtggtaggattggtcccctcgaattactcaattcttgaatcagataccgagtttt 40941022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 14997742 - 14997807
Alignment:
Q  317 cccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| || ||||||||||||||  ||| ||||||||||||||| ||| |||||| ||||||    
T  14997742 cccacaagtagaaggtgggattggtcccctcgaattaatcgattcttgtatcagataccgagtttt 14997807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 389
Target Start/End: Original strand, 25017620 - 25017692
Alignment:
Q  316 ccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||| ||||||| ||||||||||||| | || |||||| ||||||||||||||| ||||| |||||||| ||||    
T  25017620 ccccgcaagtgggcggtgggattggttcctt-ggattagtcgattcttggatcgaataccgagttttaaaaaaa 25017692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 25344138 - 25344058
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| | ||||| || |||||||||| |  |||||||| ||||||||| ||||| ||||| ||||||    
T  25344138 ggctttaaacggggcccccgctagtgggcgatgggattggttc-ctcggattagtcgattcttagatcgaataccgagtttt 25344058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 3747730 - 3747778
Alignment:
Q  334 ggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  3747730 ggattggtcccctcggattagtcgattcttggatcggataccgagtttt 3747778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 2511376 - 2511297
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||| || || ||||||| ||||||||||||||   ||| |||| | |||||||| |||||||||| ||||||    
T  2511376 ctttaaacgggacctccgcaagtgggcggtgggattggtctcctcgaattagtagattcttgaatcggataccaagtttt 2511297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 26158934 - 26159001
Alignment:
Q  308 aacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||| |||||| ||||||| ||||||||||| |||  |||||||| ||| | |||||||||||||||    
T  26158934 aacggagcccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggatacc 26159001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 33698787 - 33698706
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||| ||| ||| |||  ||||||||||||||  ||  |||| |||||||| ||||||||| || ||||||    
T  33698787 ggctttaaacggggctcccgcaaatgggtggtgggattggtcccctcaaattagtcgattctcggatcggatgccgagtttt 33698706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 364
Target Start/End: Original strand, 51532907 - 51532968
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttg 364  Q
    ||||||| ||| ||||| |||||||||||||||||||||||  || ||||| ||| ||||||    
T  51532907 ctttaaatgggacccccgcaagtggacggtgggattggtcccctcagattagtcggttcttg 51532968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 32094809 - 32094757
Alignment:
Q  330 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||| ||  |||| ||| ||||||||||||||||| ||||||    
T  32094809 ggtgggattggtcctctcatattagtcggttcttggatcggataccgagtttt 32094757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 7390 - 7302
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  7390 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttttaaaaaaa 7302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 7e-26; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 21603350 - 21603438
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  21603350 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 21603438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 2639492 - 2639411
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  2639492 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2639411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 4718765 - 4718846
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  4718765 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 4718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 10292174 - 10292255
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| | ||||||||||||| ||||| ||||||    
T  10292174 ggctttaaacggggcccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagtttt 10292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 28193594 - 28193683
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 390  Q
    |||||||||||||||||| |||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||| || |||||    
T  28193594 ggctttaaacggggcccctacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttaaaaaaaat 28193683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 42328124 - 42328205
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  42328124 ggctttaaacggggcccccacaagtggacgatgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 42328205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 8765607 - 8765526
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  8765607 ggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 8765526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 32879403 - 32879480
Alignment:
Q  305 ttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||| ||||||||||||| ||||||| ||||||    
T  32879403 ttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggattggataccgagtttt 32879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 34237736 - 34237655
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||  |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  34237736 ggctttaaacggggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 39349376 - 39349457
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| ||||||||||| |||  |||||||| ||||||||||||||||||||| ||||||    
T  39349376 ggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccaagtttt 39349457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 18128633 - 18128721
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| || ||||| ||| ||||||||||| ||||| |||||||| ||||    
T  18128633 ggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagttttaaaaaaa 18128721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 2618306 - 2618387
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| |||||| ||||||| |||||||||||||||  |||||||| |||||||||||||||||| || ||||||    
T  2618306 ggctttaaacggagcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggattccgagtttt 2618387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 3734704 - 3734623
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||| ||| | |||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  3734704 ggctttaaacggggcccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 3734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 20306028 - 20306109
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||  ||| |||| ||||| ||||||||||||||| ||||||    
T  20306028 ggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagtttt 20306109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 21092661 - 21092742
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||  ||| |||| ||||| ||||||||||||||| ||||||    
T  21092661 ggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagtttt 21092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 6953088 - 6953001
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||| |||||||| ||||| | ||||||||||||||| | ||||||| ||||||||||||||| ||||| |||||||| ||||    
T  6953088 ggctttaaacagggcccccgcaagttggcggtgggattggtccct-cggattagtcgattcttggatcgaataccgagttttaaaaaaa 6953001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 1219469 - 1219543
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||||||||||||||||||| |||||| |||| |||| ||||| ||||||||| ||||||||| ||||| |||||    
T  1219469 ggctttaaacggggcccccataagtgggcggtaggatcggtcccttcggattagtcgattcttagatcgaatacc 1219543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 33747009 - 33747083
Alignment:
Q  308 aacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||| |||||| |||||||||||||| |||||| || |||||||| ||||| ||||||||||||||| ||||||    
T  33747009 aacggagcccccgcaagtggacggtggaattggttctctcggattagtcgatccttggatcggataccgagtttt 33747083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 4698804 - 4698723
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| |||||| ||||||  |||||||||||||||  |||||||| ||||||| ||||| ||||||| ||||||    
T  4698804 ggctttaaacggagcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcatggattggataccgagtttt 4698723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 14633074 - 14633155
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||| ||||| ||  |||||||||| |||||||||||||||  | |||||| ||||||||||||||||||||| ||||||    
T  14633074 ggctttgaacggagcgtccacaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccaagtttt 14633155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 381
Target Start/End: Complemental strand, 15259487 - 15259407
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 381  Q
    ||||||||||||||||||| ||||||| |||||  ||||||||  ||| |||| |||||||||||||||||| || |||||    
T  15259487 ggctttaaacggggcccccgcaagtgggcggtgtaattggtcccctcgaattagtcgattcttggatcggatgccgagttt 15259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 20470037 - 20470124
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||| | |||||| ||||||| ||||||||||||| | | ||||||| |||||| |||||||||||||| |||||||| ||||    
T  20470037 ggctttaaacagagcccccgcaagtgggcggtgggattggttcct-cggattagtcgatttttggatcggataccgagttttaaaaaaa 20470124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 307 - 383
Target Start/End: Complemental strand, 42643193 - 42643117
Alignment:
Q  307 aaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttta 383  Q
    |||||||| |||| ||||||| |||||||||||||||  ||| |||| | ||||||||||||||||||| |||||||    
T  42643193 aaacgggggccccgcaagtgggcggtgggattggtcccctcgcattagttgattcttggatcggataccgagtttta 42643117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 19471729 - 19471811
Alignment:
Q  301 ggctttaaacggggccccca-caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||||  ||||||| || ||||||||||||  ||| |||| ||||| ||||||||||||||| ||||||    
T  19471729 ggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtttt 19471811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 19542653 - 19542735
Alignment:
Q  301 ggctttaaacggggccccca-caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||||  ||||||| || ||||||||||||  ||| |||| ||||| ||||||||||||||| ||||||    
T  19542653 ggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtttt 19542735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 19590043 - 19589961
Alignment:
Q  301 ggctttaaacggggccccca-caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||||  ||||||| || ||||||||||||  ||| |||| ||||| ||||||||||||||| ||||||    
T  19590043 ggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtttt 19589961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 264480 - 264393
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||| ||||||||| ||| ||||| ||||| |||  ||| |||| ||||||||||||||||||||| | |||||| ||||    
T  264480 ggctttaaacggg-cccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaattttaaaaaaa 264393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 651441 - 651528
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||| ||||||||| ||| ||||| ||||| |||  ||| |||| ||||||||||||||||||||| | |||||| ||||    
T  651441 ggctttaaacggg-cccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaattttaaaaaaa 651528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 837176 - 837263
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||| ||||||||| ||| ||||| ||||| |||  ||| |||| ||||||||||||||||||||| | |||||| ||||    
T  837176 ggctttaaacggg-cccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaattttaaaaaaa 837263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 381
Target Start/End: Complemental strand, 7558031 - 7557952
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 381  Q
    ||||||||||||  ||||| |||||||||||||||||||||||  ||| |||| |||||| ||| |||||||||| |||||    
T  7558031 ggctttaaacgga-cccccgcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 25248468 - 25248554
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||  |||||||| |||||| || ||||||||||| |||||||| ||||    
T  25248468 ggctttaaacggg-ccctcgcaagtgggcggtgggattggtcccctcggattagtcgatt-tttgatcggataccgagttttaaaaaaa 25248554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 28964153 - 28964225
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    ||||||||||||||||||| ||||||| | |||||||||||||  ||| |||| ||||||||| ||||| ||||    
T  28964153 ggctttaaacggggcccccgcaagtgggc-gtgggattggtcccctcgaattagtcgattcttagatcgaatac 28964225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 34610768 - 34610687
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||| | ||| | ||||||| |||| | ||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  34610768 ggctttaaacgagcccctcgcaagtgggcggtagaattggtcccctcgaattagtcgattcttggatcggataccgagtttt 34610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 24999354 - 24999394
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggt 341  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  24999354 ggctttaaacggggcccccgcaagtgggcggtgggattggt 24999394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 33534631 - 33534567
Alignment:
Q  318 ccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||  ||||||||||||| ||||||||| ||| | |||||||||| |||| ||||||    
T  33534631 ccacaagtggatcgtgggattggtcccttcggattagtcggtccttggatcggttaccgagtttt 33534567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 308 - 383
Target Start/End: Complemental strand, 13579977 - 13579902
Alignment:
Q  308 aacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttta 383  Q
    ||||| |||||||||||||||||||| ||||||| |  |||||||||| | | ||| ||||||||||  |||||||    
T  13579977 aacggagcccccacaagtggacggtgagattggttccatcggattaattggtccttagatcggatactgagtttta 13579902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 382
Target Start/End: Original strand, 9713609 - 9713655
Alignment:
Q  336 attggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  9713609 attggtccactcggattagtcgattcttggatcggataccgagtttt 9713655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 28088408 - 28088478
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggata 373  Q
    ||||||| |||||| || ||||||| ||||||||||| |||  || || || |||||||||||||||||||    
T  28088408 ctttaaatggggcctccgcaagtgggcggtgggattgatcccctcagaatagtcgattcttggatcggata 28088478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 302 - 372
Target Start/End: Complemental strand, 43817829 - 43817759
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggat 372  Q
    ||||||||| || ||||| ||||||| |||||| |||||||   ||  |||||||||||||||||||||||    
T  43817829 gctttaaacaggacccccgcaagtgggcggtggaattggtctcctcaaattaatcgattcttggatcggat 43817759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 34639269 - 34639208
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| |||||||||| |||| |||||||| | |||| || ||||||| ||||||    
T  34639269 caagtggacggtaggattggtcccttcgaattaatcggtccttgaattggataccaagtttt 34639208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 316 - 384
Target Start/End: Original strand, 2166831 - 2166899
Alignment:
Q  316 ccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    |||| ||||||| |||||||||||||||  || ||||| |||||| || ||| ||||||| ||||||||    
T  2166831 ccccgcaagtgggcggtgggattggtcccctcagattagtcgattttttgattggataccgagttttaa 2166899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 7e-26; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 34310258 - 34310346
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||| |||||| ||||||||||||||||||||||  ||| |||||||||||||||||||||||||| |||||||| ||||    
T  34310258 ggctttaaacgggacccccataagtggacggtgggattggtcccctcgaattaatcgattcttggatcggataccgagttttaaaaaaa 34310346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 35425129 - 35425203
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  35425129 ggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtcgattcttggatcggatacc 35425203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 8484742 - 8484661
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  8484742 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 8484661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 22693054 - 22693139
Alignment:
Q  304 tttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  22693054 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 22693139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 27498812 - 27498731
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  27498812 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 27498731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 301 - 375
Target Start/End: Complemental strand, 33709584 - 33709510
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||||||||||| ||||||||||||| |||||||||||||||  |||||||| |||||||||||||||||||||    
T  33709584 ggctttaaacgggacccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacc 33709510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 18207323 - 18207404
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  18207323 ggctttaaacgaggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 18207404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 9659392 - 9659304
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||| | ||||||||||| ||||||| |||||||| ||||    
T  9659392 ggctttaaatgggccccccgcaagtggacggtgggattggtcccttcggattagttgattcttggatgggataccgagttttaaaaaaa 9659304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 4603893 - 4603974
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||  |||||||||||||||||||||||  |||||||| ||| | ||||||||||||||| ||||||    
T  4603893 ggctttaaacggggcccctgcaagtggacggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 4603974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 11926583 - 11926494
Alignment:
Q  301 ggctttaaacggggccccca-caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||||||||||  |||||||  ||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  11926583 ggctttaaacggggccccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 11926494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 13659324 - 13659243
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    ||||||||||| ||||| ||||||| ||||||||||| |||  |||||||||||||||||||||||||||||| | ||||||    
T  13659324 ctttaaacgggacccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggataccgaattttaa 13659243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 15641186 - 15641106
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||    
T  15641186 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagtttt 15641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 19456291 - 19456211
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||  ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  19456291 ggctttaaacggggccccg-caagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 19456211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 32059521 - 32059440
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||| | ||||||||||||||| ||||||    
T  32059521 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 32059440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 313 - 382
Target Start/End: Complemental strand, 38631048 - 38630979
Alignment:
Q  313 ggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||| ||||||| |||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  38631048 ggcccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagtttt 38630979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 23270603 - 23270515
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||| |||||| ||| |||||||||||||||||||  |||||||| | ||||||||||| ||||||| |||||||| ||||    
T  23270603 ggctttaaacggagcccccgcaaatggacggtgggattggtcccctcggattagttgattcttggattggataccaagttttaaaaaaa 23270515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 7085705 - 7085626
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| |||| ||||||| |||||||||||||||  |||||||| |||||||||| |||||||||| ||||||    
T  7085705 ctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 7085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 10869646 - 10869565
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| |||||| || ||||||| |||||||||||||||  |||||||| ||| ||||||||||||||||| ||||||    
T  10869646 ggctttaaatggggcctccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccaagtttt 10869565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 13038536 - 13038463
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    ||||||||||||||||||| ||||||| ||||||||||| |||  ||| |||| ||||||||||||||||||||    
T  13038536 ggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13038463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 22392804 - 22392885
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||  || ||||| |||||| |||||||||||||| ||||||    
T  22392804 ggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagtttt 22392885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 30485944 - 30486025
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||  |||||| ||||||| |||||||||||||||  |||||||| || |||||||||||||||||| ||||||    
T  30485944 ggctttaaacgatgcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttggatcggataccgagtttt 30486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 41351184 - 41351104
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  41351184 ggctttaaacggggctccg-caagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 41351104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 13108529 - 13108458
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    ||||||||||||||||| ||||||| ||||||||||| |||  ||| |||| ||||||||||||||||||||    
T  13108529 ctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 21236441 - 21236362
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||| ||||||| |||||||||| ||||  || ||||| |||||||||| |||||||||| ||||||    
T  21236441 ctttaaacggggcccccgcaagtgggcggtgggattagtcccctcagattagtcgattcttgaatcggataccgagtttt 21236362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 38684324 - 38684397
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||||||||||| ||||| ||||||  |||||||||||||||  |||||||| |||||||||||||||||||||    
T  38684324 ggctttaaacggg-cccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggatacc 38684397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 5049253 - 5049333
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||  ||| |||| ||||||||||||||| ||||| ||||||    
T  5049253 ggctttaaacggg-cccccgcaaatggacggtgggattggtcccatcgaattagtcgattcttggatcgaataccaagtttt 5049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Original strand, 37495190 - 37495251
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  37495190 caagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 37495251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 34049927 - 34050015
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||  |||||||| | ||||||   |||||||||| |||||||| ||||    
T  34049927 ggctttaaacggggcccccgcaagtggtcggtaggattggtcccctcggattagttgattctcaaatcggataccgagttttaaaaaaa 34050015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 321 - 384
Target Start/End: Complemental strand, 27487615 - 27487552
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||  ||||||||    
T  27487615 caagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacagagttttaa 27487552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 31288025 - 31287946
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||| ||||||| ||||||||||||||   ||| |||| ||| |||||||| |||||||| ||||||    
T  31288025 ctttaaacggggcccccgcaagtgggcggtgggattggtctcctcgaattagtcggttcttggaccggataccgagtttt 31287946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 375
Target Start/End: Complemental strand, 11464988 - 11464915
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||||||||||||||||  |||||||  ||||||||||||||  ||| |||| |||||||||||||||||||||    
T  11464988 ggctttaaacggggccccg-caagtgggtggtgggattggtcccctcgaattagtcgattcttggatcggatacc 11464915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 315 - 384
Target Start/End: Complemental strand, 19145479 - 19145410
Alignment:
Q  315 cccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    ||||| ||||||| |||||||||||||||  |||||||| | | ||||||||||||||||| ||||||||    
T  19145479 cccccgcaagtgggcggtgggattggtcccctcggattagttggttcttggatcggataccgagttttaa 19145410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 6014361 - 6014273
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||||| || | ||||||| ||||| |||| ||||  ||| |||| ||||||||||||||||||| | |||||||| ||||    
T  6014361 ggctttaaacggggtccacgcaagtgggcggtgagattagtcccctcgaattagtcgattcttggatcggatatcgagttttaaaaaaa 6014273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 389
Target Start/End: Complemental strand, 25750674 - 25750606
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||  |||| ||||||||| ||| ||||| ||||||||||||||||||||| |||||||| ||||    
T  25750674 caagtggggggtgagattggtcccttcagattagtcgattcttggatcggataccgagttttaaaaaaa 25750606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 10399891 - 10399978
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtc-ctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||||||||  ||||||||||||||||||||| |  ||| |||| ||||||||||||||  ||| | |||||||| ||||    
T  10399891 ctttaaacggggcccccgtaagtggacggtgggattggtcaccctcgaattagtcgattcttggatcaaatagcgagttttaaaaaaa 10399978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 10631340 - 10631289
Alignment:
Q  331 gtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  10631340 gtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 10631289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 36954934 - 36955007
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    ||||||||| ||| ||||| ||||||||| |||||||| ||||  ||  |||| ||||||||||||||||||||    
T  36954934 ggctttaaatgggccccccgcaagtggactgtgggattagtcccctcatattagtcgattcttggatcggatac 36955007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 373
Target Start/End: Original strand, 42193614 - 42193671
Alignment:
Q  316 ccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggata 373  Q
    |||| ||||||| ||||||| |||||||| |||||||| |||||||||||||| ||||    
T  42193614 ccccgcaagtgggcggtggggttggtcctctcggattagtcgattcttggatcagata 42193671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 382
Target Start/End: Original strand, 31206360 - 31206440
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||| ||| |||||||||||||||||||||||||| |   |||||||| ||| | |||||  |||||||| ||||||    
T  31206360 gctttaaatgggacccccacaagtggacggtgggattggactcctcggattagtcggtccttgggccggataccgagtttt 31206440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 371
Target Start/End: Original strand, 5067392 - 5067447
Alignment:
Q  316 ccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcgga 371  Q
    |||| ||||||| |||||||||||||||  || ||||| |||||||||||||||||    
T  5067392 ccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcgga 5067447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 930547 - 930478
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 390  Q
    ||||||||| ||| |||||||||  |||||||| ||| | ||||||||||||| | |||||||| |||||    
T  930547 caagtggacagtgtgattggtcccctcggattagtcggtccttggatcggatatcgagttttaaaaaaat 930478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 8821100 - 8821181
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||  |||| || ||||||||  |||||||||||||  |||| |||| || ||||||||||| |||||| ||||||    
T  8821100 ggctttaaattgggctccaacaagtgggtggtgggattggtcacttcgaattagtctattcttggatcagataccgagtttt 8821181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 25548587 - 25548534
Alignment:
Q  329 cggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||| | ||| |||| ||||||||||||||| ||||| ||||||    
T  25548587 cggtgggattggtcatctcgaattagtcgattcttggatcgaataccgagtttt 25548534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 26009345 - 26009264
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| |||||||   |||||||| ||||  |||||||| ||| |||||| |||| ||| | ||||||    
T  26009345 ggctttaaacggggcccccgcaagtgggtagtgggattagtcccctcggattagtcggttcttgaatcgaatatcgagtttt 26009264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 28614543 - 28614486
Alignment:
Q  325 tggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||| |||  ||| |||| |||||| |||||||||||||| ||||||    
T  28614543 tggacggtgggattgatcccctcgaattagtcgatttttggatcggataccgagtttt 28614486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 12647829 - 12647861
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgg 334  Q
    ||||||||||| |||||||||||||||||||||    
T  12647829 gctttaaacggagcccccacaagtggacggtgg 12647861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 38086413 - 38086361
Alignment:
Q  323 agtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||||||||||||||||||| |||  |||| ||| |||||||||| ||||||    
T  38086413 agtggacggtgggattggtcccttcaaattagtcggttcttggatcagatacc 38086361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 5e-24; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 22120008 - 22120089
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  22120008 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22120089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 40542991 - 40542910
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  40542991 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 40542910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 3851877 - 3851965
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||| ||||||| ||||||||||| |||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  3851877 ggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 3851965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 17197031 - 17196943
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  ||| |||| ||||||||||||||||||||| |||||||| ||||    
T  17197031 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttaaaaaaa 17196943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 2751391 - 2751472
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  2751391 ggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2751472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 7275397 - 7275478
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||| |||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  7275397 ggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 16374114 - 16374195
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  16374114 ggctttaaacgggacccccgcaaatggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 16374195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 21835271 - 21835352
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||| | ||||||    
T  21835271 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatatcgagtttt 21835352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 23092216 - 23092297
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||| |||||||||||||||||||  |||||||| ||||||| ||||||||||||| ||||||    
T  23092216 ggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggattagtcgattcatggatcggataccgagtttt 23092297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 42913594 - 42913513
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| |||||||||||||||||||||||  |||||||| | ||||||| ||||||||||| ||||||    
T  42913594 ggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagtttt 42913513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 18044227 - 18044315
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||||||||||||||||||  ||||| ||||||||  || ||||| ||||||||||||||||||||| |||||||| ||||    
T  18044227 ggctttaaacggggcccccacaagtgggtggtggaattggtcccctcagattagtcgattcttggatcggataccgagttttaaaaaaa 18044315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 11997969 - 11998050
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||| |||||||| ||||||| |||||||||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  11997969 ggctttaaactgggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 11998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 22703606 - 22703687
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||    
T  22703606 ggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattctttgatcggatacccagtttt 22703687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 382
Target Start/End: Complemental strand, 21217913 - 21217833
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| ||||||||||||| ||||||||||| |||  |||||||| | ||||||||||||||||||| ||||||    
T  21217913 gctttaaacgggccccccacaagtgggcggtgggattgatcccctcggattagttgattcttggatcggataccgagtttt 21217833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 382
Target Start/End: Original strand, 31197711 - 31197791
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||| ||||||| |||||||||||||||  || ||||| ||||||||||||||||||| | ||||||    
T  31197711 gctttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcgagtttt 31197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 303 - 382
Target Start/End: Original strand, 27312274 - 27312353
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||| |||||| ||||||| |||||||||||||||  || ||||| ||||||||||||||||||||| ||||||    
T  27312274 ctttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagtttt 27312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 654785 - 654705
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||  |||||||| ||| ||||||||||||||||| ||||||    
T  654785 ggctttaaacggg-cccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccgagtttt 654705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 7175943 - 7175870
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    |||||||||| || ||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||    
T  7175943 ggctttaaacaggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatac 7175870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 29861790 - 29861871
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| ||||||||||| |||  ||| |||| ||||||||| ||||||||||| ||||||    
T  29861790 ggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttagatcggataccgagtttt 29861871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 31712983 - 31712902
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||| |||| ||| | ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  31712983 ggctttaagcgggaccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 369
Target Start/End: Original strand, 9683946 - 9684014
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcg 369  Q
    |||||||||||||| |||||||||||| |||| |||| |||||  ||||||||||||||||||||||||    
T  9683946 ggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcgattcttggatcg 9684014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 36772384 - 36772296
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||||||||||   ||||| |||||| ||| ||||| |||||||| ||||||||| ||||||||||| |||||||| ||||    
T  36772384 ggctttaaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgattctttgatcggataccgagttttaaaaaaa 36772296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 375
Target Start/End: Complemental strand, 25102889 - 25102816
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||||||||| |||||||| |||||| |||||||||||||| | ||||||||| |||||||||||||| ||||||    
T  25102889 ggctttaaacagggcccccgcaagtg-acggtgggattggttccttcggattagtcgattcttggatcagatacc 25102816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 2344419 - 2344500
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||||| ||||||  |||||||||||||||  |||||||| ||| | ||||||||||||||| ||||||    
T  2344419 ggctttaaacgggacccccgcaagtgagcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 2344500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 23012589 - 23012508
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| ||||||||||||||||| |||||||||||||||  ||| |||| || |||| | ||||||||||| ||||||    
T  23012589 ggctttaaatggggcccccacaagtgggcggtgggattggtcccctcgtattagtcaattcattgatcggataccgagtttt 23012508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 381
Target Start/End: Original strand, 22638408 - 22638488
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 381  Q
    |||||||||||||||| || ||||||| ||||||||||| ||   ||| |||| ||||||||||||||||||||| |||||    
T  22638408 ggctttaaacggggcctccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 39145732 - 39145645
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||| ||||  |||||||||||||||||||||||  ||| |||| |||||||||| ||| |||||| |||||||| ||||    
T  39145732 ggctttaaacggg-cccctgcaagtggacggtgggattggtcccctcgaattagtcgattcttgaatcagataccaagttttaaaaaaa 39145645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 41907594 - 41907507
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||| ||||||| |||||||  ||||||||||||||   | ||||| ||||||||||||||||||||| |||||||| ||||    
T  41907594 ggctttaaacgtggcccccgcaagtgggtggtgggattggtcccc-cagattagtcgattcttggatcggataccgagttttaaaaaaa 41907507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 11910034 - 11909947
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||| |||||| ||||||||||||||||||||||||| ||| |||| ||||| |||| ||  |||| | |||||||| ||||    
T  11910034 gctttaaacgaggcccctacaagtggacggtgggattggtcctctcgaattagtcgatccttgaattagatatcgagttttaaaaaaa 11909947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 27009481 - 27009568
Alignment:
Q  303 ctttaaacggggcccccacaa-gtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||  ||| ||||||||||||||||||||  ||  |||| ||||||||||||| ||||||| |||||||| ||||    
T  27009481 ctttaaacggggcccctgcaaagtggacggtgggattggtcccctcaaattagtcgattcttggattggataccgagttttaaaaaaa 27009568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 304 - 375
Target Start/End: Complemental strand, 43785377 - 43785306
Alignment:
Q  304 tttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||||||||||| || ||||||||||||| |||||||||  | |||||| |||||| ||||||||||||||    
T  43785377 tttaaacggggcctccgcaagtggacggtgagattggtccccttggattagtcgatttttggatcggatacc 43785306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 381
Target Start/End: Original strand, 19421353 - 19421431
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 381  Q
    ||||||| ||||| ||||||||||| ||||||||||||||   |||||||| |||||||||| ||| |||||| |||||    
T  19421353 ctttaaatggggcgcccacaagtgggcggtgggattggtctcctcggattagtcgattcttgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 21373830 - 21373888
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgat 359  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||  ||||||| |||||    
T  21373830 ggctttaaacggggcccccgcaagtggacggtgagattggtcctcacggattagtcgat 21373888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 21574176 - 21574102
Alignment:
Q  308 aacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||| | ||||| |||||||||  |||||||| ||| | ||||||||||||||| ||||||    
T  21574176 aacggggcccccacaagtaggcggtgagattggtcccctcggattagtcggtccttggatcggataccgagtttt 21574102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 25333525 - 25333610
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||| || ||||| ||||||| | |||||||||||||  |||||||| ||||||||||||||||| ||| |||||||| ||||    
T  25333525 ctttaaacaggccccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttggatcgga-accgagttttaaaaaaa 25333610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 312 - 382
Target Start/End: Original strand, 28089950 - 28090020
Alignment:
Q  312 gggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||| ||||||| || || |||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  28089950 gggcccccgcaagtgggcgatgagattggtcccctcggattagtcgattcttggatcggataccgagtttt 28090020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 2103175 - 2103254
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||  |||||||| ||||||| | ||||||||||| ||||||    
T  2103175 ggctttaaatggggcccccgcaagtgggcggtgggattggtcc-ctcggattagtcgattcat-gatcggataccgagtttt 2103254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 381
Target Start/End: Original strand, 32849711 - 32849791
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 381  Q
    ||||||||| ||| | |||| |||||| | |||||||||||||  || ||||| ||||||||||||||||||||| |||||    
T  32849711 ggctttaaatgggactcccataagtgggcagtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 22643421 - 22643342
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||| |||| | ||||||| ||||| |||| ||||  |||||||||||||||||| |||| |||||| ||||||    
T  22643421 ctttaaacggagccctcgcaagtggccggtgtgattagtcccctcggattaatcgattctttgatcagataccaagtttt 22643342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 10091308 - 10091388
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| |||| |||| ||||||| ||||||||||| |||  |||||||| ||||||||| |||| |||||| ||||||    
T  10091308 ggctttaaatggggtccccgcaagtgggcggtgggattgatcccctcggattagtcgattctt-gatccgataccgagtttt 10091388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 390
Target Start/End: Original strand, 22696473 - 22696530
Alignment:
Q  333 gggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 390  Q
    |||||||||||| |||||||| ||| | ||||||||||||||| |||||||| |||||    
T  22696473 gggattggtcctctcggattagtcggtccttggatcggataccgagttttaaaaaaat 22696530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 28950991 - 28951079
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||| ||| | ||||| | |||||||||||||||  ||| | ||  | |||||||||||||||||| |||||||| ||||    
T  28950991 ggctttaaacgggtccctcgcaagtcggcggtgggattggtcccctcgaactagacaattcttggatcggataccgagttttaaaaaaa 28951079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 17212173 - 17212247
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||| ||||||| ||||  ||||||   ||||||||||||||  |||||||| |||||||||||||| ||||||    
T  17212173 ggcttaaaacgggacccctgcaagtgagtggtgggattggtcccctcggattagtcgattcttggatcagatacc 17212247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 28647096 - 28647170
Alignment:
Q  308 aacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||||| ||||||||||||| |  ||| |||| ||  | ||||||||||||| | ||||||    
T  28647096 aacggggcccccacaagtgggcggtgggattggttccctcgaattagtctgtccttggatcggatatcgagtttt 28647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 343
Target Start/End: Original strand, 40332193 - 40332235
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcc 343  Q
    ||||||| |||||||| |||||||||| |||||||||||||||    
T  40332193 ggctttagacggggcctccacaagtgggcggtgggattggtcc 40332235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 31274034 - 31274114
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||| ||  ||||||| | ||| |||||||||  ||| |||| |||||||||||| |||||||| ||||||    
T  31274034 ggctttaaacggggctccg-caagtgggcagtgagattggtcccctcgaattagtcgattcttggaccggataccgagtttt 31274114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 23636646 - 23636594
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggatta 353  Q
    ||||||||| ||||||| ||||||| |||||||||||||| | | ||||||||    
T  23636646 ggctttaaatggggccctcacaagtagacggtgggattggacttctcggatta 23636594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 36395496 - 36395540
Alignment:
Q  331 gtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||| ||||||||| |||||||| ||||||||||||| |||||||    
T  36395496 gtggaattggtcctctcggattagtcgattcttggattggatacc 36395540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 5e-24; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 34723915 - 34723996
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| |||||||  ||||||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  34723915 ggctttaaacggggcccccgcaagtgggtggtgggattggtcctctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 34844839 - 34844758
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  34844839 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 40058933 - 40058852
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  40058933 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 40058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 301 - 381
Target Start/End: Original strand, 52983735 - 52983815
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 381  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||    
T  52983735 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 5609283 - 5609202
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||  |||||||| ||||||||||||||||||||| ||||||    
T  5609283 ggctttaaatggggcccccgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttt 5609202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 45787785 - 45787704
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||| |||||||| |||||||||||||||||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  45787785 ggctttaaacagggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 45787704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 19660613 - 19660532
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||| |||||||| ||||||| ||||||||||| |||  |||||||| ||||||||||||||||||||| ||||||    
T  19660613 ggctttaaacagggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttt 19660532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 27528876 - 27528795
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||| ||||||||||| ||||||| ||||| |||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  27528876 ggctttatacggggcccccgcaagtgggcggtgagattggtcccctcggattagtcgattcttggatcggataccgagtttt 27528795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 33696360 - 33696271
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 390  Q
    ||||||||| ||||||||| ||||||| ||||| |||||||||| |||||||| || |||||||||||||||| | |||||||| |||||    
T  33696360 ggctttaaatggggcccccgcaagtgggcggtgagattggtcctctcggattagtcaattcttggatcggatatcgagttttaaaaaaat 33696271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 51595140 - 51595221
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    |||||||||||  |||| |||||||||||||| |||| ||  ||||||||||||||||||||||||||||||| ||||||||    
T  51595140 ctttaaacgggatccccgcaagtggacggtggaattgatctcttcggattaatcgattcttggatcggataccgagttttaa 51595221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 382
Target Start/End: Original strand, 46714510 - 46714590
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||| ||||||| |||||||||||||||  |||||||| || ||||||| |||||||||| ||||||    
T  46714510 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttgaatcggataccgagtttt 46714590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 303 - 382
Target Start/End: Original strand, 32986315 - 32986394
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  ||||| || ||||||||||||||||||||| ||||||    
T  32986315 ctttaaatggggcccccgcaagtgggcggtgggattggtcccctcggaatagtcgattcttggatcggataccgagtttt 32986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 32942486 - 32942552
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggat 367  Q
    ||||||||||||  |||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  32942486 ggctttaaacggcccccccacaagtggacggtgggattggtcccctcggataaatcgattcttggat 32942552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 321 - 382
Target Start/End: Original strand, 23639760 - 23639821
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  23639760 caagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 321 - 382
Target Start/End: Original strand, 23645418 - 23645479
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  23645418 caagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 32990551 - 32990624
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  ||||| || ||||||||||||||| ||||    
T  32990551 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggactagtcgattcttggatcgaatac 32990624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 54127423 - 54127350
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||| |||||||| |||||||    
T  54127423 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggaccggatac 54127350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 369
Target Start/End: Original strand, 13550324 - 13550392
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcg 369  Q
    |||||||||||||| |||||||||||| |||| |||| |||||  ||||||||||||||||||||||||    
T  13550324 ggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcgattcttggatcg 13550392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 20566466 - 20566554
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||||||||| |||||| ||||||| || ||||||||||||  || ||||| ||||||||||||||||||| | |||||||| ||||    
T  20566466 ggctttaaacggagcccccgcaagtgggcgctgggattggtcccctcagattagtcgattcttggatcggatatcgagttttaaaaaaa 20566554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 303 - 375
Target Start/End: Complemental strand, 55961832 - 55961761
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||||||||||||||| |||||||| ||||||||||||| | |||||||||||||||||||| |||| |||||    
T  55961832 ctttaaacggggcccc-acaagtgggcggtgggattggttccttcggattaatcgattcttgaatcgaatacc 55961761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 306 - 373
Target Start/End: Original strand, 4064981 - 4065048
Alignment:
Q  306 taaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggata 373  Q
    ||||||| |||||||||||||| |||||||||||||||  |||||||| |||||| ||||||||||||    
T  4064981 taaacggagcccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggata 4065048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 380
Target Start/End: Complemental strand, 20078065 - 20077986
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtt 380  Q
    |||||||||||||||||||  |||||| |||||||||| || |  |||||||| ||||||||||||||||||||| ||||    
T  20078065 ggctttaaacggggcccccgtaagtgggcggtgggattagttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 382
Target Start/End: Original strand, 44343632 - 44343711
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| ||| ||||||| |||||||||||||||  ||| |||| |||||||||| |||||||||| ||||||    
T  44343632 ctttaaacggggctcccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagtttt 44343711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 51535736 - 51535811
Alignment:
Q  301 ggctttaaacggggccccca-caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||||||||||||||||||| ||||||| |||||||||||||||  ||| |||| ||||||||| |||||||||||    
T  51535736 ggctttaaacggggcccccagcaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggatacc 51535811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 383
Target Start/End: Original strand, 1985952 - 1986032
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttta 383  Q
    |||||||||||| |||||||||||||| |||||| |||||| || |||||||| ||||||||||||| ||||||| |||||||    
T  1985952 ggctttaaacggagcccccacaagtgggcggtggaattggt-ctatcggattagtcgattcttggat-ggataccgagtttta 1986032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 27574434 - 27574507
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    ||||||||| ||||||||| ||||||| ||||| | |||||||  ||||||||||| |||||||||||||||||    
T  27574434 ggctttaaaaggggcccccgcaagtgggcggtgagtttggtcccctcggattaatcaattcttggatcggatac 27574507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 35229285 - 35229372
Alignment:
Q  303 ctttaaacggggcccc-cacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||| |||| ||||||||  |||||||||||||||  ||| |||| ||||||||||||||||||||| | |||||| ||||    
T  35229285 ctttaaacgggtccccccacaagtgagcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaattttaaaaaaa 35229372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 321 - 384
Target Start/End: Original strand, 52494624 - 52494687
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 384  Q
    ||||||| |||||||||||||||  ||| |||| ||||||||||||||||||||| ||||||||    
T  52494624 caagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttaa 52494687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 373
Target Start/End: Complemental strand, 9517720 - 9517650
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggata 373  Q
    ||||||||||||||||| || ||||  |||| |||||||||  |||||||| |||||||||||||||||||    
T  9517720 ctttaaacggggcccccgcaggtgggtggtgagattggtcccctcggattagtcgattcttggatcggata 9517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 315 - 389
Target Start/End: Original strand, 33289184 - 33289258
Alignment:
Q  315 cccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||| |||||||||||||| |||| ||||  |||||||| |||||||||||||||||||||  ||||||| ||||    
T  33289184 cccctacaagtggacggtgagattagtcccctcggattagtcgattcttggatcggataccgggttttaaaaaaa 33289258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 317 - 375
Target Start/End: Original strand, 37302619 - 37302677
Alignment:
Q  317 cccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||||||||| || |||||||||||| ||||||||| |||||||||| ||||||||||    
T  37302619 cccacaagtgggcgatgggattggtcccttcggattagtcgattcttgaatcggatacc 37302677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 375
Target Start/End: Complemental strand, 43719147 - 43719094
Alignment:
Q  322 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||||| |||||||||||||| | |||||||| |||||||||||||||||||||    
T  43719147 aagtgggcggtgggattggtcatctcggattagtcgattcttggatcggatacc 43719094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 9978585 - 9978509
Alignment:
Q  306 taaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||| ||| ||||| ||||||| |||||||||||||||  |||||||| | ||||||| ||||||||||| ||||||    
T  9978585 taaatgggtcccccgcaagtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagtttt 9978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 12824536 - 12824604
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||||||   ||| |||| ||||||||||||||||||||  |||||||| ||||    
T  12824536 caagtggacggtgggattggtctcatcgaattagtcgattcttggatcggatacggagttttaaaaaaa 12824604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 36131589 - 36131510
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||| |||||  |||||| |||||||||||||||  |||||||| |||||| || |||| |||||| ||||||    
T  36131589 ctttaaacgggacccccgtaagtgggcggtgggattggtcccctcggattagtcgattattagatcagataccgagtttt 36131510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 4585792 - 4585732
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattctt 363  Q
    ||||||||||||| ||||| ||||||| |||||| |||||||||||||||||| |||||||||    
T  4585792 ggctttaaacggg-cccccgcaagtgggcggtgg-attggtcctttcggattagtcgattctt 4585732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 21387566 - 21387487
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||||  |||| ||||||| |||||||  ||||||  |||||||| |||||| |||||||||||||| ||||||    
T  21387566 ggctttaaacgggatccccgcaagtgggcggtggg--tggtcccctcggattagtcgattattggatcggataccaagtttt 21387487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 375
Target Start/End: Complemental strand, 30879227 - 30879173
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    ||||||||||||||||||||| |  || |||||||||||||||||||| ||||||    
T  30879227 caagtggacggtgggattggttccctcagattaatcgattcttggatcagatacc 30879173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 22488109 - 22488028
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||| ||| ||||||||||| |||  ||  |||| ||| | ||||||||||||||| ||||||    
T  22488109 ggctttaaacggggcccccgcaaatgggcggtgggattgatcccctcaaattagtcggtccttggatcggataccaagtttt 22488028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 13871325 - 13871369
Alignment:
Q  331 gtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||    
T  13871325 gtgggattggtccttttggattagtcgattcttagatcggatacc 13871369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 7093508 - 7093575
Alignment:
Q  322 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    |||||| ||||||||||||||| |||| |||| ||| | ||||||||||||| | |||||||| ||||    
T  7093508 aagtgggcggtgggattggtcccttcgaattagtcggtccttggatcggatatcgagttttaaaaaaa 7093575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 23131499 - 23131436
Alignment:
Q  319 cacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| |||| ||||||||||  ||| |||| ||||||||| ||||||||||| ||||||    
T  23131499 cacaagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagtttt 23131436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 320 - 375
Target Start/End: Original strand, 37172900 - 37172955
Alignment:
Q  320 acaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 375  Q
    |||||||  ||||| ||||| ||||||||||||| ||||| |||||||||||||||    
T  37172900 acaagtgagcggtgagattgatcctttcggattagtcgatccttggatcggatacc 37172955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 25852337 - 25852419
Alignment:
Q  307 aaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||| ||| | ||||||| |  ||||||||||||  |||||||| ||| |||||||| |||||||| |||||||| ||||    
T  25852337 aaacgggaccctcgcaagtgggcaatgggattggtcccctcggattagtcggttcttggaccggataccgagttttaaaaaaa 25852419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 4912042 - 4912123
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||||||||| |||||| |||||||  |||| ||||| |||   || |||| |||||||||||||| |||||| ||||||    
T  4912042 ggctttaaacggagcccccgcaagtgggtggtgtgattgatccccccgaattagtcgattcttggatcagataccgagtttt 4912123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 18875597 - 18875517
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||| |||||||||||||   ||||||||| |||  |||||||| || ||| ||||||| |||||| ||||||    
T  18875597 ggctttaaacggg-cccccacaagtgggtagtgggattgatcccctcggattagtcaatttttggatcagataccgagtttt 18875517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 49287974 - 49288046
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    ||||||||||||| | ||| ||||||| || || |||||||||  |||||||| |||||||||||||| |||||    
T  49287974 ggctttaaacggg-ctcccgcaagtgggcgctgagattggtcccctcggattagtcgattcttggatcagatac 49288046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 1820596 - 1820548
Alignment:
Q  99 gaaaatcttgatctctttgtcactgctagcagtgtattggcttttggga 147  Q
    ||||||||| | ||||||||||||| ||||||||| ||| |||||||||    
T  1820596 gaaaatcttcaactctttgtcactggtagcagtgtcttgccttttggga 1820548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 1840851 - 1840803
Alignment:
Q  99 gaaaatcttgatctctttgtcactgctagcagtgtattggcttttggga 147  Q
    ||||||||| | ||||||||||||| ||||||||| ||| |||||||||    
T  1840851 gaaaatcttcaactctttgtcactggtagcagtgtcttgccttttggga 1840803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 389
Target Start/End: Complemental strand, 17637912 - 17637845
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||| |||||  ||||||||  |||||||| |||||||||| |||||||||| |||||||| ||||    
T  17637912 caagtgggcggtgatattggtcccctcggattagtcgattcttg-atcggataccgagttttaaaaaaa 17637845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 343
Target Start/End: Complemental strand, 22625140 - 22625100
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcc 343  Q
    ||||||| ||||||||| ||||||| |||||||||||||||    
T  22625140 ctttaaatggggcccccgcaagtgggcggtgggattggtcc 22625100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 55158395 - 55158343
Alignment:
Q  330 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||  |||||||| |||||| |||||||||| ||| ||||||    
T  55158395 ggtgggattggtcccctcggattagtcgatttttggatcggaaaccgagtttt 55158343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 5163 - 5082
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  5163 ggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 39208 - 39289
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| |||||||||||||| |||||| ||||||    
T  39208 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 39289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 40441 - 40521
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  40441 ggctttaaacggggcccccgcaagtgggcggtgggattggtcc-ctcggattagtcgattcttggatcggataccgagtttt 40521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 66870 - 66958
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||| | ||||||||||||||| |||||||| ||||    
T  66870 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttaaaaaaa 66958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 303 - 389
Target Start/End: Complemental strand, 13126 - 13040
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||| ||||||||||||||||||| |||  || ||||| | ||||||||||||||||||| |||||||| ||||    
T  13126 ctttaaacggggcccccgcaagtggacggtgggattgatcccctcagattagttgattcttggatcggataccgagttttaaaaaaa 13040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 391
Target Start/End: Original strand, 15107 - 15196
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaatg 391  Q
    ||||||||| ||| ||||| ||||||| ||| ||||||||||   |||||||| || |||||||||||||||| | ||||| || ||||||    
T  15107 ggctttaaatgggccccccgcaagtgggcgg-gggattggtctcctcggattagtcaattcttggatcggataacaagtttaaaaaaaatg 15196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 52952 - 52871
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||||||||||||| || |||| |||| ||||||||||| |||||||| |||||||||| |||||||||| ||||||    
T  52952 ggctttaaacggggcccccgcaggtgggcggtaggattggtcctctcggattagtcgattcttgaatcggataccgagtttt 52871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 1137 - 1057
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| ||||||||| |||||||||||||||||||||||  ||| |||| ||||||||| ||||||||||| ||||||    
T  1137 ggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagtttt 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 46; Significance: 7e-17; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 9380 - 9300
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| ||||||||| |||||||||||||||||||||||  ||| |||| ||||||||| ||||||||||| ||||||    
T  9380 ggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagtttt 9300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 364
Target Start/End: Complemental strand, 12081 - 12019
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttg 364  Q
    ||||||||| |||||||| ||||||||||||||||||||||||  ||| |||| || |||||||    
T  12081 ggctttaaatggggcccc-acaagtggacggtgggattggtcccctcgaattagtcaattcttg 12019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 161925 - 162006
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    |||||| || ||||||||| ||||||| |||||||||||||||  |||||||| |||||||||||||| |||||| ||||||    
T  161925 ggcttttaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 162006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 389
Target Start/End: Complemental strand, 2507 - 2419
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| ||  | |||| |||||||||| |||||||| ||||    
T  2507 ggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccgagttttaaaaaaa 2419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 389
Target Start/End: Complemental strand, 97445 - 97359
Alignment:
Q  303 ctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 389  Q
    ||||||||||| ||||| ||||||| |||||||||||||||| ||| |||| ||| || ||||| |||||||| |||||||| ||||    
T  97445 ctttaaacgggacccccgcaagtgggcggtgggattggtcctctcgtattagtcggtttttggaccggataccgagttttaaaaaaa 97359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 316 - 390
Target Start/End: Complemental strand, 123131 - 123058
Alignment:
Q  316 ccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 390  Q
    |||||||||||   ||||||||||||||  ||||||||||||| |||||||||||||||| |||||||| |||||    
T  123131 ccccacaagtgtgtggtgggattggtcccctcggattaatcga-tcttggatcggataccaagttttaaaaaaat 123058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 10774 - 10695
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| |||||||| ||||||||||||||||||||||||  ||| |||| || |||||| ||||||||||| ||||||    
T  10774 ggctttaaatggggcccc-acaagtggacggtgggattggtcccctcgaattagtcaattctt-gatcggataccgagtttt 10695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 8512 - 8451
Alignment:
Q  321 caagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||| |||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||    
T  8512 caagtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttt 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 301 - 382
Target Start/End: Original strand, 32404 - 32484
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 382  Q
    ||||||||| | ||||||| |||||||  ||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||    
T  32404 ggctttaaatgtggcccccgcaagtgggtggtgggattggtcccctcggattagtcgattctt-gatcggataccgagtttt 32484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 41725 - 41653
Alignment:
Q  301 ggctttaaacggggcccccacaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 374  Q
    ||||||||||||||||||  ||||||| |  ||||||||||||  |||||||| ||||||||| ||||||||||    
T  41725 ggctttaaacggggcccctgcaagtgggcaatgggattggtcccctcggattagtcgattctt-gatcggatac 41653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 38 - 1
Alignment:
Q  302 gctttaaacggggcccccacaagtggacggtgggattg 339  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  38 gctttaaacggggcccccacatgtgggcggtgggattg 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University