View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14813_low_15 (Length: 394)
Name: NF14813_low_15
Description: NF14813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14813_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 4231707 - 4232085
Alignment:
| Q |
1 |
tgaaattctgaataaattcaatatgatggattgcaattctgcattaacaccaactgag-tgagtatgagaaacaaaggaacaacatgtgagtaaaatgtt |
99 |
Q |
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| T |
4231707 |
tgaaattctgaataaattcaatatgatggattgcaattctgcattaacaccaactgaggtgagtatgagaaacaaaggaacaacatgtgagtaaaatgtt |
4231806 |
T |
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| Q |
100 |
gatcctaatttgtttaggcaattagtaggatcattgaggtcccatgtcaaaggattctgaggcacaacaatggagcagaatactatggcatcttattaag |
199 |
Q |
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| T |
4231807 |
gatcctaatttgtttaggcaattagtaggatcattgaggtaccatgtcaaaggattctgaggcacaacaatggagcagaatactatggcatcttattaag |
4231906 |
T |
|
| Q |
200 |
aaacaaagtgaattaaggacaagttgattattgattatttccctac-aactaattagtcgcaaatatcttcaccaaaccaatcaaaacggttcaatcccc |
298 |
Q |
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| T |
4231907 |
aaacaaagtgaattaaggacaagttgattattgattatttccatacaaactaattagtcgcaaatatcttcaccaaaccaatcaaaacggttcaattccc |
4232006 |
T |
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| Q |
299 |
tcttctatgtttcaatgtatgatgatgtttgtgggacgaatatcccttgtacttcgttttgtttgtgggttaagttcttttt |
380 |
Q |
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| T |
4232007 |
tcttctatgtttcaatgt---atgatgtttgtgggacgaatatcccttgtacttcatttcgtttgtgggttaagttcttttt |
4232085 |
T |
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