View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14813_low_16 (Length: 386)

Name: NF14813_low_16
Description: NF14813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14813_low_16
NF14813_low_16
[»] chr3 (68 HSPs)
chr3 (1-90)||(27647477-27647566)
chr3 (1-90)||(21289131-21289220)
chr3 (1-89)||(53516899-53516987)
chr3 (1-86)||(7671806-7671891)
chr3 (3-91)||(4663458-4663546)
chr3 (1-89)||(19547489-19547577)
chr3 (1-89)||(25592324-25592412)
chr3 (1-95)||(43715066-43715160)
chr3 (7-90)||(11140246-11140329)
chr3 (7-90)||(27082670-27082753)
chr3 (7-90)||(42067578-42067661)
chr3 (4-94)||(876543-876633)
chr3 (1-86)||(3136273-3136358)
chr3 (7-92)||(29347584-29347669)
chr3 (7-90)||(29786921-29787004)
chr3 (7-89)||(38785406-38785488)
chr3 (7-89)||(42364251-42364333)
chr3 (8-96)||(44522016-44522105)
chr3 (19-90)||(27079715-27079786)
chr3 (7-90)||(35171517-35171600)
chr3 (7-94)||(40650062-40650149)
chr3 (8-90)||(31308876-31308958)
chr3 (7-89)||(44670582-44670664)
chr3 (7-89)||(45636089-45636171)
chr3 (1-100)||(29629303-29629400)
chr3 (1-80)||(32717662-32717741)
chr3 (7-90)||(44365620-44365703)
chr3 (94-145)||(54527713-54527764)
chr3 (1-63)||(45518664-45518726)
chr3 (3-91)||(23456452-23456541)
chr3 (7-89)||(42848530-42848614)
chr3 (1-89)||(52082340-52082435)
chr3 (3-90)||(36790208-36790294)
chr3 (98-145)||(50204523-50204570)
chr3 (94-145)||(51401560-51401611)
chr3 (8-90)||(4392979-4393061)
chr3 (54-92)||(5639666-5639704)
chr3 (9-89)||(40021079-40021160)
chr3 (3-87)||(40477759-40477844)
chr3 (8-89)||(47948720-47948801)
chr3 (3-86)||(1129448-1129532)
chr3 (3-90)||(26885291-26885379)
chr3 (8-91)||(29491661-29491745)
chr3 (54-90)||(32122271-32122307)
chr3 (7-90)||(39630214-39630298)
chr3 (31-87)||(43903074-43903130)
chr3 (54-90)||(52058876-52058912)
chr3 (98-145)||(8165766-8165813)
chr3 (3-89)||(16136942-16137029)
chr3 (3-90)||(26001194-26001280)
chr3 (98-145)||(38277453-38277500)
chr3 (98-141)||(40930175-40930218)
chr3 (278-345)||(44902210-44902276)
chr3 (90-141)||(45983630-45983681)
chr3 (6-91)||(42622172-42622258)
chr3 (46-91)||(52179321-52179367)
chr3 (23-88)||(6890431-6890496)
chr3 (101-142)||(23803060-23803101)
chr3 (6-90)||(43745670-43745755)
chr3 (9-86)||(46959557-46959634)
chr3 (98-134)||(2571399-2571435)
chr3 (3-91)||(4521590-4521677)
chr3 (98-134)||(10307897-10307933)
chr3 (8-91)||(30349004-30349088)
chr3 (53-89)||(33551162-33551198)
chr3 (3-35)||(36098926-36098958)
chr3 (54-90)||(46936658-46936694)
chr3 (89-145)||(54508092-54508148)
[»] chr7 (62 HSPs)
chr7 (1-89)||(43750075-43750163)
chr7 (1-89)||(18990091-18990179)
chr7 (1-90)||(45857792-45857881)
chr7 (1-69)||(20439133-20439201)
chr7 (1-96)||(11485989-11486084)
chr7 (283-369)||(38759783-38759869)
chr7 (1-94)||(31482369-31482462)
chr7 (1-68)||(30317216-30317283)
chr7 (1-87)||(41809204-41809290)
chr7 (7-87)||(40941877-40941957)
chr7 (1-89)||(42974895-42974983)
chr7 (7-89)||(3909928-3910010)
chr7 (7-96)||(30624047-30624136)
chr7 (1-86)||(30936410-30936495)
chr7 (1-89)||(44964139-44964227)
chr7 (7-86)||(1691315-1691394)
chr7 (278-369)||(22689657-22689748)
chr7 (7-90)||(30862788-30862871)
chr7 (7-90)||(41381496-41381579)
chr7 (90-150)||(44473515-44473575)
chr7 (7-91)||(23331698-23331784)
chr7 (7-86)||(28326684-28326763)
chr7 (46-89)||(29689288-29689331)
chr7 (7-90)||(41913418-41913501)
chr7 (7-85)||(21699613-21699691)
chr7 (31-89)||(21920040-21920098)
chr7 (54-92)||(31743297-31743335)
chr7 (7-89)||(38129709-38129791)
chr7 (54-91)||(17833929-17833966)
chr7 (31-91)||(31759991-31760051)
chr7 (31-95)||(48460589-48460653)
chr7 (98-145)||(4969893-4969940)
chr7 (7-89)||(27956377-27956460)
chr7 (98-145)||(29692551-29692598)
chr7 (1-91)||(43069078-43069166)
chr7 (3-86)||(46836904-46836987)
chr7 (3-86)||(47748122-47748205)
chr7 (7-89)||(41331729-41331811)
chr7 (57-89)||(2088868-2088900)
chr7 (90-150)||(8561569-8561628)
chr7 (13-89)||(8770695-8770770)
chr7 (98-134)||(33072112-33072148)
chr7 (3-91)||(41311052-41311139)
chr7 (98-145)||(26037213-26037260)
chr7 (54-89)||(27569643-27569678)
chr7 (98-145)||(29398145-29398192)
chr7 (98-145)||(33343108-33343155)
chr7 (54-89)||(34363984-34364019)
chr7 (94-145)||(36032550-36032601)
chr7 (7-90)||(42710930-42711013)
chr7 (98-145)||(45501579-45501626)
chr7 (3-91)||(15715902-15715991)
chr7 (54-91)||(27800399-27800436)
chr7 (5-42)||(34118528-34118565)
chr7 (8-92)||(41968747-41968832)
chr7 (54-90)||(1343018-1343054)
chr7 (3-86)||(1806484-1806568)
chr7 (54-90)||(10209985-10210021)
chr7 (41-93)||(22904850-22904902)
chr7 (54-101)||(23574354-23574402)
chr7 (98-134)||(34270392-34270428)
chr7 (98-134)||(46290141-46290177)
[»] chr1 (85 HSPs)
chr1 (1-89)||(632966-633054)
chr1 (1-99)||(26011260-26011358)
chr1 (9-89)||(48616773-48616853)
chr1 (5-89)||(42317147-42317231)
chr1 (1-90)||(28791686-28791775)
chr1 (5-90)||(9166872-9166957)
chr1 (1-91)||(33906317-33906407)
chr1 (10-94)||(33098982-33099066)
chr1 (7-87)||(51984936-51985016)
chr1 (1-87)||(2247069-2247155)
chr1 (1-87)||(11778954-11779040)
chr1 (1-91)||(50239552-50239642)
chr1 (7-90)||(31931022-31931105)
chr1 (8-87)||(51184044-51184123)
chr1 (7-89)||(922166-922248)
chr1 (7-89)||(27295058-27295140)
chr1 (1-91)||(35910160-35910250)
chr1 (3-85)||(52260817-52260899)
chr1 (7-91)||(16482574-16482658)
chr1 (7-86)||(51781428-51781507)
chr1 (1-87)||(2620648-2620734)
chr1 (7-89)||(18641888-18641970)
chr1 (1-91)||(23304405-23304495)
chr1 (4-86)||(26102794-26102876)
chr1 (7-89)||(50905581-50905663)
chr1 (8-90)||(52303012-52303094)
chr1 (7-92)||(28493807-28493892)
chr1 (7-92)||(35305148-35305233)
chr1 (1-90)||(47719291-47719379)
chr1 (1-89)||(7121957-7122045)
chr1 (7-91)||(45423607-45423691)
chr1 (7-95)||(46771056-46771144)
chr1 (7-83)||(51519788-51519864)
chr1 (31-90)||(7435512-7435571)
chr1 (10-93)||(34256449-34256532)
chr1 (7-90)||(38262458-38262541)
chr1 (7-90)||(41073269-41073352)
chr1 (7-89)||(5956851-5956933)
chr1 (7-89)||(8461850-8461932)
chr1 (1-91)||(27352845-27352935)
chr1 (3-92)||(35874258-35874348)
chr1 (7-89)||(37498744-37498826)
chr1 (7-89)||(39190881-39190963)
chr1 (54-89)||(24451738-24451773)
chr1 (94-145)||(28016300-28016351)
chr1 (5-68)||(36275039-36275102)
chr1 (3-89)||(48977196-48977283)
chr1 (46-89)||(51369329-51369372)
chr1 (8-89)||(31075935-31076017)
chr1 (8-90)||(45650006-45650088)
chr1 (54-91)||(4155788-4155825)
chr1 (31-88)||(38207879-38207936)
chr1 (7-88)||(44246322-44246403)
chr1 (8-80)||(6520310-6520382)
chr1 (3-94)||(51056192-51056283)
chr1 (3-89)||(477754-477841)
chr1 (98-141)||(5875226-5875269)
chr1 (98-141)||(6180310-6180353)
chr1 (1-32)||(10179191-10179222)
chr1 (98-145)||(13321996-13322043)
chr1 (7-86)||(23056768-23056847)
chr1 (98-141)||(35512849-35512892)
chr1 (98-141)||(38812864-38812907)
chr1 (98-145)||(39310797-39310844)
chr1 (98-145)||(41676571-41676618)
chr1 (8-94)||(44263641-44263728)
chr1 (3-89)||(47693206-47693293)
chr1 (3-89)||(51787788-51787875)
chr1 (98-141)||(51920442-51920485)
chr1 (3-93)||(5360523-5360612)
chr1 (61-91)||(44808402-44808432)
chr1 (53-86)||(12837774-12837807)
chr1 (8-89)||(26424166-26424247)
chr1 (8-89)||(44978869-44978950)
chr1 (53-86)||(47209049-47209082)
chr1 (53-90)||(51991530-51991567)
chr1 (98-134)||(1502731-1502767)
chr1 (98-134)||(23576425-23576461)
chr1 (8-91)||(24381314-24381398)
chr1 (3-63)||(32144988-32145048)
chr1 (54-94)||(35534243-35534283)
chr1 (3-90)||(38260801-38260889)
chr1 (54-94)||(38862175-38862215)
chr1 (47-83)||(41321370-41321406)
chr1 (39-83)||(45673333-45673377)
[»] chr4 (72 HSPs)
chr4 (1-93)||(47302392-47302484)
chr4 (1-90)||(46216090-46216179)
chr4 (1-90)||(39162123-39162212)
chr4 (1-93)||(56361631-56361721)
chr4 (1-86)||(53695715-53695800)
chr4 (3-91)||(29646622-29646710)
chr4 (1-94)||(36091054-36091147)
chr4 (1-92)||(9858241-9858332)
chr4 (1-90)||(31681336-31681425)
chr4 (1-90)||(31908442-31908531)
chr4 (7-90)||(14802711-14802794)
chr4 (1-85)||(46004642-46004726)
chr4 (7-89)||(3716325-3716407)
chr4 (7-89)||(27538915-27538997)
chr4 (7-89)||(41759985-41760067)
chr4 (7-89)||(51436138-51436220)
chr4 (10-94)||(1414426-1414510)
chr4 (31-91)||(12756000-12756060)
chr4 (7-91)||(34280553-34280637)
chr4 (5-85)||(36592357-36592437)
chr4 (7-99)||(43137689-43137781)
chr4 (7-89)||(28037685-28037767)
chr4 (7-89)||(30342825-30342907)
chr4 (7-89)||(30539569-30539651)
chr4 (20-89)||(18425455-18425524)
chr4 (54-99)||(39103910-39103955)
chr4 (31-87)||(44957267-44957323)
chr4 (7-83)||(52589077-52589153)
chr4 (94-145)||(19450907-19450958)
chr4 (94-145)||(19468314-19468365)
chr4 (3-86)||(48262565-48262647)
chr4 (9-87)||(38835854-38835932)
chr4 (8-90)||(52809269-52809351)
chr4 (7-92)||(37855118-37855203)
chr4 (8-89)||(48579234-48579315)
chr4 (3-90)||(9356702-9356790)
chr4 (94-142)||(40049681-40049729)
chr4 (54-90)||(53973828-53973864)
chr4 (98-145)||(18882278-18882325)
chr4 (54-89)||(40439006-40439041)
chr4 (7-89)||(53389171-53389253)
chr4 (3-89)||(53936832-53936919)
chr4 (8-90)||(18052264-18052346)
chr4 (84-142)||(24684960-24685018)
chr4 (8-89)||(38975277-38975356)
chr4 (3-89)||(39380719-39380805)
chr4 (48-89)||(30891453-30891494)
chr4 (54-91)||(31296890-31296927)
chr4 (7-93)||(47302025-47302113)
chr4 (46-91)||(49288534-49288579)
chr4 (54-90)||(4490873-4490909)
chr4 (53-89)||(19526724-19526760)
chr4 (54-90)||(32737560-32737596)
chr4 (7-91)||(48066329-48066413)
chr4 (31-90)||(31975548-31975607)
chr4 (98-145)||(44916654-44916701)
chr4 (7-90)||(46041700-46041783)
chr4 (54-89)||(46688102-46688137)
chr4 (98-145)||(52391418-52391465)
chr4 (31-86)||(52405536-52405591)
chr4 (3-89)||(1792148-1792233)
chr4 (46-91)||(44998409-44998455)
chr4 (54-91)||(595643-595680)
chr4 (46-87)||(3690512-3690553)
chr4 (3-96)||(17370597-17370689)
chr4 (54-91)||(19842436-19842473)
chr4 (101-142)||(50352425-50352466)
chr4 (54-86)||(19594934-19594966)
chr4 (46-89)||(24291978-24292022)
chr4 (53-89)||(24566735-24566771)
chr4 (54-90)||(49286980-49287016)
chr4 (7-91)||(55722474-55722558)
[»] chr2 (58 HSPs)
chr2 (1-93)||(20212472-20212563)
chr2 (1-90)||(11598113-11598203)
chr2 (1-89)||(37909379-37909467)
chr2 (2-90)||(6513583-6513671)
chr2 (1-89)||(6438493-6438580)
chr2 (1-89)||(12547364-12547452)
chr2 (1-87)||(36489360-36489446)
chr2 (7-91)||(58918-59002)
chr2 (7-86)||(11813521-11813600)
chr2 (1-89)||(7467120-7467215)
chr2 (8-89)||(34438511-34438592)
chr2 (7-87)||(6884161-6884241)
chr2 (1-79)||(5420237-5420315)
chr2 (7-87)||(34665573-34665653)
chr2 (7-90)||(4673926-4674009)
chr2 (7-94)||(11227622-11227709)
chr2 (7-90)||(14533146-14533229)
chr2 (8-91)||(38963389-38963472)
chr2 (1-60)||(40370494-40370553)
chr2 (7-89)||(5091997-5092079)
chr2 (1-63)||(19636416-19636478)
chr2 (1-63)||(19835009-19835071)
chr2 (7-95)||(42427895-42427983)
chr2 (22-89)||(32499150-32499217)
chr2 (31-89)||(15362817-15362875)
chr2 (7-89)||(15771634-15771716)
chr2 (31-89)||(41555773-41555831)
chr2 (46-88)||(42046076-42046118)
chr2 (3-87)||(30980882-30980967)
chr2 (7-87)||(5389525-5389605)
chr2 (8-90)||(1353506-1353586)
chr2 (54-89)||(17809400-17809435)
chr2 (98-145)||(26003357-26003404)
chr2 (7-89)||(3383511-3383593)
chr2 (46-91)||(713713-713758)
chr2 (54-95)||(11088210-11088251)
chr2 (3-92)||(33429130-33429218)
chr2 (281-345)||(5160929-5160992)
chr2 (98-145)||(4576337-4576384)
chr2 (54-89)||(4786362-4786397)
chr2 (98-141)||(8065247-8065290)
chr2 (7-86)||(37083211-37083290)
chr2 (98-141)||(38248431-38248474)
chr2 (3-89)||(45157530-45157617)
chr2 (52-90)||(8541695-8541733)
chr2 (99-141)||(34213961-34214003)
chr2 (31-89)||(38600159-38600217)
chr2 (54-92)||(42641222-42641260)
chr2 (3-87)||(4298221-4298306)
chr2 (45-86)||(12071158-12071199)
chr2 (104-145)||(17234955-17234996)
chr2 (6-90)||(35896735-35896820)
chr2 (90-142)||(8770889-8770941)
chr2 (48-88)||(9220833-9220873)
chr2 (98-134)||(24729588-24729624)
chr2 (98-142)||(25948162-25948206)
chr2 (3-35)||(35310152-35310184)
chr2 (3-35)||(37425534-37425566)
[»] scaffold0604 (1 HSPs)
scaffold0604 (1-87)||(2022-2108)
[»] chr5 (56 HSPs)
chr5 (1-93)||(27116458-27116550)
chr5 (1-89)||(28332120-28332209)
chr5 (1-89)||(12362676-12362764)
chr5 (1-88)||(2318744-2318831)
chr5 (1-91)||(4618030-4618120)
chr5 (1-95)||(13795588-13795682)
chr5 (1-89)||(21051622-21051710)
chr5 (8-92)||(34302643-34302727)
chr5 (1-69)||(36880806-36880874)
chr5 (1-99)||(13090904-13091002)
chr5 (3-96)||(9589202-9589295)
chr5 (9-87)||(3425403-3425481)
chr5 (1-95)||(41802100-41802194)
chr5 (7-87)||(6560828-6560908)
chr5 (1-76)||(37431667-37431745)
chr5 (8-87)||(21605650-21605729)
chr5 (7-93)||(6114098-6114184)
chr5 (7-89)||(43237677-43237759)
chr5 (7-92)||(1662018-1662103)
chr5 (1-86)||(14967235-14967320)
chr5 (3-90)||(29743894-29743982)
chr5 (7-90)||(6532578-6532661)
chr5 (9-91)||(2413925-2414007)
chr5 (9-94)||(9534865-9534950)
chr5 (31-91)||(5204967-5205027)
chr5 (31-91)||(40756891-40756951)
chr5 (7-86)||(32467046-32467125)
chr5 (7-89)||(42917117-42917199)
chr5 (7-88)||(3056386-3056467)
chr5 (54-91)||(4429417-4429454)
chr5 (7-91)||(2141240-2141324)
chr5 (7-91)||(13410540-13410624)
chr5 (7-83)||(18228783-18228859)
chr5 (98-145)||(3398340-3398387)
chr5 (94-141)||(23995423-23995470)
chr5 (3-90)||(35162350-35162437)
chr5 (8-89)||(231499-231581)
chr5 (3-93)||(2011379-2011468)
chr5 (7-89)||(2029353-2029435)
chr5 (46-87)||(33145223-33145264)
chr5 (7-87)||(24097873-24097953)
chr5 (3-79)||(35817668-35817744)
chr5 (54-89)||(5513045-5513080)
chr5 (54-89)||(23690872-23690907)
chr5 (6-89)||(29996510-29996593)
chr5 (54-93)||(34902025-34902064)
chr5 (31-89)||(5141017-5141075)
chr5 (54-91)||(2021679-2021716)
chr5 (54-91)||(7080119-7080156)
chr5 (21-86)||(31587996-31588061)
chr5 (54-91)||(40524443-40524480)
chr5 (193-225)||(26265175-26265207)
chr5 (98-134)||(30839912-30839948)
chr5 (98-134)||(36597710-36597746)
chr5 (90-142)||(41350325-41350377)
chr5 (54-86)||(43393127-43393159)
[»] chr8 (69 HSPs)
chr8 (1-89)||(26439841-26439930)
chr8 (3-89)||(43485361-43485447)
chr8 (1-89)||(529267-529355)
chr8 (278-369)||(3931499-3931590)
chr8 (1-92)||(16323556-16323647)
chr8 (1-89)||(37465684-37465772)
chr8 (9-91)||(13483222-13483304)
chr8 (1-91)||(17642072-17642162)
chr8 (1-89)||(2273010-2273098)
chr8 (5-89)||(4475046-4475129)
chr8 (8-91)||(39347455-39347538)
chr8 (1-90)||(19718669-19718758)
chr8 (1-90)||(42444536-42444625)
chr8 (7-99)||(37511078-37511170)
chr8 (1-89)||(43049537-43049624)
chr8 (8-91)||(6800097-6800180)
chr8 (7-87)||(44934901-44934981)
chr8 (7-90)||(14498627-14498710)
chr8 (7-90)||(29773444-29773527)
chr8 (7-89)||(28090192-28090274)
chr8 (7-92)||(38502181-38502266)
chr8 (7-91)||(23286563-23286647)
chr8 (7-90)||(15726214-15726297)
chr8 (7-92)||(29229501-29229586)
chr8 (8-89)||(37161504-37161585)
chr8 (7-90)||(945975-946058)
chr8 (8-91)||(23274620-23274703)
chr8 (7-90)||(36002355-36002438)
chr8 (7-89)||(34332112-34332194)
chr8 (3-87)||(1043060-1043145)
chr8 (31-92)||(7885874-7885935)
chr8 (90-145)||(9580112-9580167)
chr8 (7-74)||(10280575-10280642)
chr8 (94-145)||(16445743-16445794)
chr8 (98-145)||(28014869-28014916)
chr8 (54-93)||(32888029-32888068)
chr8 (54-92)||(41954-41992)
chr8 (3-89)||(29604335-29604420)
chr8 (19-89)||(39721970-39722040)
chr8 (6-90)||(39300411-39300496)
chr8 (9-96)||(2749632-2749720)
chr8 (54-94)||(9509219-9509259)
chr8 (7-87)||(12163267-12163347)
chr8 (7-87)||(12407695-12407775)
chr8 (54-90)||(12801106-12801142)
chr8 (3-99)||(43921115-43921211)
chr8 (3-89)||(2261029-2261116)
chr8 (3-90)||(2880250-2880336)
chr8 (3-90)||(17096602-17096688)
chr8 (102-145)||(24993459-24993502)
chr8 (98-145)||(27874692-27874739)
chr8 (54-93)||(27970008-27970047)
chr8 (8-90)||(29454534-29454617)
chr8 (27-90)||(31893677-31893740)
chr8 (8-90)||(36162189-36162272)
chr8 (98-145)||(36967081-36967128)
chr8 (98-141)||(38212955-38212998)
chr8 (54-92)||(23870631-23870669)
chr8 (6-91)||(40776941-40777027)
chr8 (3-89)||(41674484-41674569)
chr8 (46-99)||(5215684-5215737)
chr8 (3-91)||(6631225-6631314)
chr8 (54-90)||(417678-417714)
chr8 (98-134)||(2161518-2161554)
chr8 (98-134)||(3306066-3306102)
chr8 (3-90)||(4214815-4214903)
chr8 (98-134)||(6818148-6818184)
chr8 (46-89)||(28897266-28897310)
chr8 (90-126)||(38047941-38047977)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-79)||(29255-29333)
[»] scaffold0625 (1 HSPs)
scaffold0625 (1-89)||(6581-6669)
[»] chr6 (40 HSPs)
chr6 (1-89)||(11446736-11446824)
chr6 (1-90)||(34196127-34196216)
chr6 (1-90)||(6265252-6265341)
chr6 (1-86)||(30020676-30020761)
chr6 (1-90)||(15383522-15383611)
chr6 (7-90)||(32834098-32834181)
chr6 (7-87)||(2258905-2258985)
chr6 (7-91)||(13390383-13390467)
chr6 (1-89)||(17010361-17010449)
chr6 (31-91)||(21181137-21181197)
chr6 (31-90)||(1705605-1705664)
chr6 (1-88)||(8376342-8376429)
chr6 (7-90)||(26358877-26358960)
chr6 (7-87)||(17545607-17545687)
chr6 (8-79)||(24487612-24487683)
chr6 (7-89)||(6848510-6848592)
chr6 (31-89)||(24248804-24248862)
chr6 (3-99)||(9661742-9661839)
chr6 (7-92)||(24212909-24212994)
chr6 (7-99)||(1096211-1096303)
chr6 (7-91)||(8401740-8401824)
chr6 (27-87)||(24159816-24159876)
chr6 (3-89)||(8549874-8549961)
chr6 (98-145)||(34692474-34692521)
chr6 (27-89)||(1339374-1339436)
chr6 (9-99)||(4901275-4901365)
chr6 (54-91)||(32871887-32871924)
chr6 (55-99)||(1371399-1371443)
chr6 (55-99)||(1379147-1379191)
chr6 (31-87)||(2994673-2994729)
chr6 (31-87)||(14506918-14506974)
chr6 (7-90)||(4110550-4110633)
chr6 (3-89)||(4509430-4509517)
chr6 (54-89)||(10965719-10965754)
chr6 (31-86)||(19473674-19473729)
chr6 (53-94)||(9686771-9686813)
chr6 (98-139)||(17552598-17552639)
chr6 (98-134)||(14228137-14228173)
chr6 (98-134)||(28943780-28943816)
chr6 (94-134)||(33017855-33017895)
[»] scaffold0005 (1 HSPs)
scaffold0005 (7-90)||(36933-37016)
[»] scaffold0001 (1 HSPs)
scaffold0001 (48-91)||(404683-404726)
[»] scaffold0009 (2 HSPs)
scaffold0009 (3-88)||(214141-214226)
scaffold0009 (90-132)||(191318-191360)
[»] scaffold1844 (1 HSPs)
scaffold1844 (31-99)||(1106-1174)
[»] scaffold0072 (1 HSPs)
scaffold0072 (54-91)||(47946-47983)
[»] scaffold0131 (1 HSPs)
scaffold0131 (31-86)||(10672-10727)
[»] scaffold0060 (1 HSPs)
scaffold0060 (8-90)||(45760-45843)
[»] scaffold0493 (1 HSPs)
scaffold0493 (46-91)||(1379-1425)
[»] scaffold0077 (1 HSPs)
scaffold0077 (7-65)||(48034-48092)
[»] scaffold0022 (1 HSPs)
scaffold0022 (46-98)||(166780-166833)


Alignment Details
Target: chr3 (Bit Score: 86; Significance: 5e-41; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 27647566 - 27647477
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27647566 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 27647477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 21289131 - 21289220
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  21289131 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtacctatacactcaaatttttgagtgtaccatagaatttgcct 21289220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 53516899 - 53516987
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  53516899 tctcttcaaaaaataatacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttaagtgtaccatagaatttgcc 53516987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 7671891 - 7671806
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  7671891 tctcttcaaaaaataacacatttaactattaatttgtttattgggtgtaccaatacactcaaatttttgggtgtaccatagaattt 7671806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 4663458 - 4663546
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  4663458 tcttcaaaaaataacacatttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccatagaacttgcctt 4663546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19547577 - 19547489
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||  ||||||||||||||||||    
T  19547577 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtaccgatacactcaaatttttggatgtaccatagaatttgcc 19547489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25592324 - 25592412
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||| |||||||||||| |||||| | |||| |||||||||||||||||||  ||||||||| ||||||||    
T  25592324 tctcttcaaaaaataacacattaaactattaatttattgatttggtgtatcaatacactcaaatttttggatgtaccatataatttgcc 25592412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 43715066 - 43715160
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttta 95  Q
    |||||||||||||||| || ||||||||||| ||| |||||| | ||||||||||||| ||||||||||  |||||||||||||||||| |||||    
T  43715066 tctcttcaaaaaataatacgtttaactattagtttattgatttggtgtaccaatacacccaaatttttggatgtaccatagaatttgccatttta 43715160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 11140329 - 11140246
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| ||||||||||||||||||||    
T  11140329 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcct 11140246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 27082670 - 27082753
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||||||||||||||||| ||||||    
T  27082670 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgcct 27082753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 42067661 - 42067578
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| ||||||||||||||||||||    
T  42067661 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcct 42067578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 876543 - 876633
Alignment:
Q  4 cttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttt 94  Q
    |||||||||||||| |||||||||||||||||   |||| | |||||||||||||| ||||| ||| |||||||||| |||||||||||||    
T  876543 cttcaaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatataatttgccttttt 876633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3136358 - 3136273
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    |||||| |||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||   ||||| |||||||||    
T  3136358 tctcttaaaaaaataacacatttaactattaatttattgatttggtgtaccaatacacccaaatttttagatgtacaatagaattt 3136273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 29347584 - 29347669
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| |||||||||||||||| |||||    
T  29347584 caaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttaccttt 29347669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 29786921 - 29787004
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| ||| ||||||||||||||||||||    
T  29786921 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcct 29787004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 38785406 - 38785488
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| |||||||||| ||||||||    
T  38785406 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatataatttgcc 38785488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 42364251 - 42364333
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||  ||||||||||||||||   |||| | |||||||||||||||||||| ||| |||||||||||||||||||    
T  42364251 caaaaaataacttatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 42364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 44522105 - 44522016
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcctttttat 96  Q
    |||||||||| |||||||||||||||||   || || |||||||||||||||||||| | |||| |||||||||||||||||||| ||||    
T  44522105 aaaaaataactcatttaactattaatttaaagagtgaatgtaccaatacactcaaatatattgaatgtaccatagaatttgccttcttat 44522016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 27079715 - 27079786
Alignment:
Q  19 catttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||||||   |||| | |||||||||||||||||||| ||||||||||||||||| ||||||    
T  27079715 catttaactattaatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgcct 27079786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 35171517 - 35171600
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   | || | |||||||||||||||||||| ||| ||||||||||||| ||||||    
T  35171517 caaaaaataactcatttaactattaatttaagggtttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 35171600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 40650149 - 40650062
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttt 94  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||   |||||||||||| ||||||||||    
T  40650149 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttagttgtaccatagaacttgccttttt 40650062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 31308958 - 31308876
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||| |||||||||||||||||   |||| | ||| |||||||||||||||| ||  ||||||||||||||||||||    
T  31308958 aaaaaataactcatttaactattaatttaaggatttggtgttccaatacactcaaattgttaggtgtaccatagaatttgcct 31308876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 44670582 - 44670664
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   ||||   |||||||||||||||||||| ||| ||||||| |||||||||||    
T  44670582 caaaaaataactcatttaactattaatttaaggattttgtgtaccaatacactcaaattgttgggtgtaccttagaatttgcc 44670664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 45636171 - 45636089
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| ||| ||||||| |||||||||||    
T  45636171 caaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacactcaaattgttgggtgtaccctagaatttgcc 45636089  T

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Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 29629303 - 29629400
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttattatg 100  Q
    |||||||| ||||||||||||||||  |||||||| |||||| | |||||||||||||  ||||||||  |||||||||| | |||||| ||||| ||||    
T  29629303 tctcttcataaaataacacatttaa--attaatttattgatttggtgtaccaatacacctaaattttttggtgtaccataaagtttgccattttaatatg 29629400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32717741 - 32717662
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccata 80  Q
    |||||||| ||||||| |||||||||||||||||| ||||||   ||||  |||||||||||||||||  ||||||||||    
T  32717741 tctcttcagaaaataatacatttaactattaatttattgatttagtgtattaatacactcaaattttttggtgtaccata 32717662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 44365703 - 44365620
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||| ||||| ||| ||||| ||||||||||||||    
T  44365703 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacacttaaattgttgggtgtatcatagaatttgcct 44365620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 54527713 - 54527764
Alignment:
Q  94 tattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  54527713 tattatgtgcaaatttgcacatgttaagaaatttaaaatataaattttgtat 54527764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 45518726 - 45518664
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaa 63  Q
    |||||||||||||||||||||||||||||| |||| |||||  | | ||||||||||||||||    
T  45518726 tctcttcaaaaaataacacatttaactattgatttattgatctggtataccaatacactcaaa 45518664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 23456541 - 23456452
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| ||| |||||||||||||||||   || |||||||||| |||||||||||| | ||| |||||  ||||||||||||||    
T  23456541 tcttcaaaaaaaaactcatttaactattaatttaaagagtggatgtaccgatacactcaaatatattgggtgtaatatagaatttgcctt 23456452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 42848530 - 42848614
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgt--accaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||  ||||||||||||||||| ||| ||||||||||||| |||||    
T  42848530 caaaaaataactcatttaactattaatttaaggatttggtgtgcaccaatacactcaaattgttgggtgtaccatagaacttgcc 42848614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 52082340 - 52082435
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatg-------taccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||||||||| ||||  ||||| ||||       |||||||||||||| || |||  |||||||||||||||||||    
T  52082340 tctcttcaaaaaataacacatttaactattgatttaatgatttgatgtaccaaataccaatacactcatatctttaggtgtaccatagaatttgcc 52082435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 36790208 - 36790294
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| ||   |||||| |||||||||  || |||| |||||| ||||||||||| | ||||||||||||||||||||||||    
T  36790208 tcttcaaaaaacaatcaatttaattattaatttaatgtttgg-tgtaccgatacactcaaaatgttgagtgtaccatagaatttgcct 36790294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 50204570 - 50204523
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||    
T  50204570 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtat 50204523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 51401611 - 51401560
Alignment:
Q  94 tattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    |||||||| |||||||| |||||||||||| || ||||||||||||||||||    
T  51401611 tattatgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtat 51401560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 4393061 - 4392979
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||| | ||||| |||||||||  | ||| ||||||||  |||||||||||| || ||||||| |||||||||||||    
T  4393061 aaaaaataactcgtttaattattaatttaataatttgatgtacccctacactcaaattgttaagtgtactatagaatttgcct 4392979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 5639704 - 5639666
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  5639704 tacactcaaatatttgagtgtaccatagaatttgccttt 5639666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 40021160 - 40021079
Alignment:
Q  9 aaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcc 89  Q
    ||||| ||| |||||||||||||||||   || ||||||||||| ||||||||||| | |||  ||||||||||||||||||    
T  40021160 aaaaacaactcatttaactattaatttaaagagtggatgtaccagtacactcaaatatattggatgtaccatagaatttgcc 40021079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 40477844 - 40477759
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttg 87  Q
    |||||||||||||||  ||||||||||||||||   || ||| ||||||  ||||||||||| | ||| |||||||||||||||||    
T  40477844 tcttcaaaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttg 40477759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 47948720 - 47948801
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||| |||||||||||||||||   |||| | ||||||||| |||| ||||| ||| ||||| ||||||| |||||    
T  47948720 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatgcacttaaattgttgggtgtatcatagaacttgcc 47948801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 1129448 - 1129532
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaattt 86  Q
    ||||||||||| |||  ||||||||||||||||   || ||| ||||||  ||||||||||| | ||||||||||||||||||||    
T  1129448 tcttcaaaaaacaacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatgtattgagtgtaccatagaattt 1129532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 26885291 - 26885379
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| ||| |||||||||||||||||   || | | |||||| |||||||||||| | ||| |||||||||| |||||||||    
T  26885291 tcttcaaaaaacaactcatttaactattaatttaaagaattggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcct 26885379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 29491745 - 29491661
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaattt-ttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||  ||||||||||||||||   || ||| ||||||  ||||||||||| | ||| |||||||||||||||||||||    
T  29491745 aaaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcctt 29491661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 32122271 - 32122307
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||| ||||||||||||||||||||||||||||||    
T  32122271 tacacttaaatttttgagtgtaccatagaatttgcct 32122307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 39630214 - 39630298
Alignment:
Q  7 caaaaaataacacatttaactatt-aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||| |||||    ||| | ||||| |||||||||||||| |||  |||||||||||||||||||    
T  39630214 caaaaaataactcatttaactatttaatttaaaaattcggtgtactaatacactcaaattgttggatgtaccatagaatttgcct 39630298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 43903130 - 43903074
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    |||||| ||||| | ||||||  ||||||||||||||| ||||||||||||||||||    
T  43903130 aatttgatgatttggtgtaccggtacactcaaatttttaagtgtaccatagaatttg 43903074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 52058876 - 52058912
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||||||||||    
T  52058876 tacactcaaatatttgagtgtaccatagaatttgcct 52058912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 8165813 - 8165766
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| |||||||||||| || |||||| |||||||||||    
T  8165813 atgtgcaaatttgcacatgttaagaagtttaaaatataaattttgtat 8165766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 16136942 - 16137029
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| ||   ||||||||||||||||   || |||||||||| |||||||||||| | |||  ||||||||||||||||||    
T  16136942 tcttcaaaaaacaatttatttaactattaatttaaagagtggatgtaccgatacactcaaatatattggatgtaccatagaatttgcc 16137029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 26001280 - 26001194
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| ||   |||||| |||||||||  || |||| ||||||  |||||||||| | ||||||||||||||||||||||||    
T  26001280 tcttcaaaaaacaatcaatttaattattaatttaatgtttgg-tgtaccggtacactcaaaatattgagtgtaccatagaatttgcct 26001194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 38277500 - 38277453
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||| ||||||| |||||||||||| || ||||||||||||||||||    
T  38277500 atgtgtaaatttgcacatgttaagaagtttaaaatagaaattttgtat 38277453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 40930218 - 40930175
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaatttt 141  Q
    ||||||||||||| |||||||||||| || ||||||||||||||    
T  40930218 atgtgcaaatttgcacatgttaagaagtttaaaatagaaatttt 40930175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 44902210 - 44902276
Alignment:
Q  278 ttttctctctctcttattaacctttctgaccttttctatgccatattaatgagctcatttcttgaaac 345  Q
    |||||||||||||||||||| |||| | ||||||||| || |||||||| || ||| |||||||||||    
T  44902210 ttttctctctctcttattaatcttt-tcaccttttctgtgtcatattaaagaactcctttcttgaaac 44902276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 45983681 - 45983630
Alignment:
Q  90 tttttattatgtgcaaatttgtacatgttaagaaattgaaaatagaaatttt 141  Q
    ||||||| ||||||||||||| ||| |||||||| || ||||||||||||||    
T  45983681 tttttatcatgtgcaaatttgcacaggttaagaagtttaaaatagaaatttt 45983630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 42622172 - 42622258
Alignment:
Q  6 tcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||  ||||||||||||||||   || ||| ||||||  ||||||||||| | ||| |||||||||| ||||||||||    
T  42622172 tcaaaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccataaaatttgcctt 42622258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 52179321 - 52179367
Alignment:
Q  46 tgtaccaatacactcaaattttt-gagtgtaccatagaatttgcctt 91  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  52179321 tgtaccagtacactcaaatttttcgagtgtaccatagaaattgcctt 52179367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 6890496 - 6890431
Alignment:
Q  23 taactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgc 88  Q
    |||||||||||||    ||| |||||||||||||| ||||||||||||   |||||||||||||||    
T  6890496 taactattaatttaaaaatttgatgtaccaatacattcaaatttttgaaaataccatagaatttgc 6890431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 23803060 - 23803101
Alignment:
Q  101 tgcaaatttgtacatgttaagaaattgaaaatagaaattttg 142  Q
    |||||||||| |||||||||||| || |||||||||||||||    
T  23803060 tgcaaatttgcacatgttaagaagtttaaaatagaaattttg 23803101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 43745670 - 43745755
Alignment:
Q  6 tcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaattt-ttgagtgtaccatagaatttgcct 90  Q
    |||||||| |||  ||||||||||||||||   || ||| ||||||  || |||||||| | ||||||||||||||||||||||||    
T  43745670 tcaaaaaacaacttatttaactattaatttaaagagtgggtgtaccggtatactcaaatatattgagtgtaccatagaatttgcct 43745755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 46959634 - 46959557
Alignment:
Q  9 aaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||  |||||||||||||||||    ||| || ||||||||||||||||||| ||  |||||| |||||||||    
T  46959634 aaaaataattcatttaactattaatttaagaatttgacgtaccaatacactcaaattgttaggtgtacgatagaattt 46959557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 2571435 - 2571399
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  2571435 atgtgcaaatttgcacatgttaagaaatttaaaatag 2571399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 4521590 - 4521677
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| ||   |||||| |||||||||  || |||| ||||||  |||||||||| | ||| |||||||||||||||||||||    
T  4521590 tcttcaaaaaacaatcaatttaattattaatttaatgtttgg-tgtaccggtacactcaaaatgttgggtgtaccatagaatttgcctt 4521677  T

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Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 10307933 - 10307897
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  10307933 atgtgcaaatttgcacatgttaagaaatttaaaatag 10307897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 30349088 - 30349004
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcctt 91  Q
    |||||| ||| ||||||||||| |||||   || || ||||||| |||||||||||| |  |||||||||| |||||||||||||    
T  30349088 aaaaaaaaactcatttaactatgaatttaaagagtgaatgtaccgatacactcaaatataatgagtgtaccgtagaatttgcctt 30349004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 33551198 - 33551162
Alignment:
Q  53 atacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  33551198 atacactcaaattttttagtgtaccataaaatttgcc 33551162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 36098958 - 36098926
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaattt 35  Q
    ||||||||||||||| |||||||||||||||||    
T  36098958 tcttcaaaaaataactcatttaactattaattt 36098926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 46936694 - 46936658
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||||  ||||||||||||||||||||    
T  46936694 tacactcaaattttttggtgtaccatagaatttgcct 46936658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 54508148 - 54508092
Alignment:
Q  89 ctttttattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||| || ||||||||||||| |||| | ||||| || ||||||||||||||||||    
T  54508148 cttttaatcatgtgcaaatttgcacatttaaagaagtttaaaatagaaattttgtat 54508092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43750163 - 43750075
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43750163 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 43750075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 18990179 - 18990091
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||| |||||||||||||||| |||||| | |||||||||||||||||||||||  |||||||||||||||||||    
T  18990179 tctcttcaaaaaataacatatttaactattaatttattgatttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcc 18990091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 45857792 - 45857881
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||||||||||||||||||||||||  ||||| | |||||||||||||||| || |||| ||||||||||||||||||||    
T  45857792 tctcttcaaaaaataacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcct 45857881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20439133 - 20439201
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttg 69  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  20439133 tctcttcaaaaaataacacatttaattattaatttgttgattgggtgtaccaatacactcaaatttttg 20439201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 11486084 - 11485989
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttat 96  Q
    |||||||||||||||||||||||||||||||||||  ||||| | ||||||||||| || |||| |||| ||||||||||||||||||| ||||||    
T  11486084 tctcttcaaaaaataacacatttaactattaatttaatgatttggtgtaccaatactcttaaatctttgggtgtaccatagaatttgcccttttat 11485989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 369
Target Start/End: Complemental strand, 38759869 - 38759783
Alignment:
Q  283 tctctctcttattaacctttctgaccttttctatgccatattaatgagctcatttcttgaaacgggatgccgtatacatgtttattt 369  Q
    |||||||||||||||||||  || ||||||||||  ||||||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  38759869 tctctctcttattaaccttgatggccttttctatatcatattaatgagctcatttcttgaaactggatgccatatacaggtttattt 38759783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 31482462 - 31482369
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttt 94  Q
    |||||||||||| ||| |||||||||||||||||   ||||| | ||||||||||||||||||| ||||||||||||||||||||  |||||||    
T  31482462 tctcttcaaaaactaatacatttaactattaattcaatgatttggtgtaccaatacactcaaatatttgagtgtaccatagaattgaccttttt 31482369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30317283 - 30317216
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaattttt 68  Q
    ||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  30317283 tctcttcaaaaaataacacatttaactattaatttattgatttggtgtaccaatacacccaaattttt 30317216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41809290 - 41809204
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    |||||||||||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||| |||| |||||||| |||||||||    
T  41809290 tctcttcaaaaaataatacatttaactactaatttaatgatttggtgtaccaatacactcaaaatttttagtgtaccgtagaatttg 41809204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 40941957 - 40941877
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||||| |||||||||||||||||   ||||   |||||||||||||||||||| |||||||||||||||||||||    
T  40941957 caaaaaataactcatttaactattaatttaaagattttgtgtaccaatacactcaaattgttgagtgtaccatagaatttg 40941877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 42974983 - 42974895
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||| ||||||||||||||||||||||| ||||||  ||||| | ||||||||| |||||| || |||| |||||||||||||||||||    
T  42974983 tctcatcaaaaaataacacatttaactactaatttaatgatttggtgtaccaatgcactcatatgtttgggtgtaccatagaatttgcc 42974895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 3910010 - 3909928
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| ||| |||||||||||||||||||    
T  3910010 caaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 3909928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 30624047 - 30624136
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttat 96  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| ||| ||||||||||||| ||||||| ||||    
T  30624047 caaaaaataactcatttaactattaatttaaaaatttggtgtaccaatacactcaaattattgggtgtaccatagaacttgccttattat 30624136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30936410 - 30936495
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    |||||||||||||| ||||||||||||||||||||  |||||   |||||||||||||||| || |||| ||||| ||||||||||    
T  30936410 tctcttcaaaaaatcacacatttaactattaatttaatgattttgtgtaccaatacactcatatctttgggtgtatcatagaattt 30936495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 44964139 - 44964227
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||| || | ||||||||||||||||  ||||| | ||||||||||||||||||| |||  |||||||||| ||||||||    
T  44964139 tctcttcaaaaaacaaaatatttaactattaatttaatgatttgttgtaccaatacactcaaatctttaggtgtaccatataatttgcc 44964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 1691315 - 1691394
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||| |||||||||||||||||   |||| |||||||||||||||||||||  |||  |||||||||||||||    
T  1691315 caaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaatggttggatgtaccatagaattt 1691394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 278 - 369
Target Start/End: Complemental strand, 22689748 - 22689657
Alignment:
Q  278 ttttctctctctcttattaacctttctgaccttttctatgccatattaatgagctcatttcttgaaacgggatgccgtatacatgtttattt 369  Q
    |||| ||||||| ||| ||||||||||  ||||| ||||||||||||||||| ||||||||||||||| | ||||| ||| || ||||||||    
T  22689748 ttttttctctcttttactaacctttctagcctttcctatgccatattaatgacctcatttcttgaaactgaatgccatatgcaagtttattt 22689657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 30862871 - 30862788
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||| ||||| ||| ||||||||||||| ||||||    
T  30862871 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcct 30862788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 41381579 - 41381496
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| ||||||||||||| |||   |||| |||||||||||||||||||||| ||  |||||||||| |||||||||    
T  41381579 caaaaaataactcatttaactattactttaaagatttgatgtaccaatacactcaaattgtttggtgtaccatataatttgcct 41381496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 44473515 - 44473575
Alignment:
Q  90 tttttattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtatatgaa 150  Q
    ||||||| ||||||||||||| |||||||||||| || |||||||||||||||||| ||||    
T  44473515 tttttatcatgtgcaaatttgaacatgttaagaagtttaaaatagaaattttgtatttgaa 44473575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 23331784 - 23331698
Alignment:
Q  7 caaaaaataacacatttaactatta--atttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||  |||||||||||||  ||||   |||| | |||||||||||||||||||| || ||||||||||||||||||||||    
T  23331784 caaaaaataattcatttaactattataatttaaggatttggtgtaccaatacactcaaattgttaagtgtaccatagaatttgcctt 23331698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 28326763 - 28326684
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| |||  ||||| |||||||||    
T  28326763 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtacgatagaattt 28326684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 29689288 - 29689331
Alignment:
Q  46 tgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  29689288 tgtaccagtacactcaaatttttgagtgtaccatagaatttgcc 29689331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 41913418 - 41913501
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||  ||||||||||||||||   |||| | |||||||||||||||||||| |||  ||||||||| |||||||||    
T  41913418 caaaaaataacttatttaactattaatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatataatttgcct 41913501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 21699613 - 21699691
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatt 85  Q
    |||||||| || |||||||||||||||||   |||| | |||||||||||||| ||||| ||| |||||||||||||||    
T  21699613 caaaaaatgactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaatt 21699691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 21920040 - 21920098
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||| ||||| | ||||||  ||||||||||||||||||||||||||||||||||||    
T  21920040 aatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaatttgcc 21920098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 31743335 - 31743297
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31743335 tacactcaaatttttgagtgtaccatagaatttgccttt 31743297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 38129709 - 38129791
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| ||| || |||||||||| |||||    
T  38129709 caaaaaataactcatttaactattaatttaaaaatttggtgtaccaatacactcaaattattgggtctaccatagaacttgcc 38129791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 17833966 - 17833929
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17833966 tacactcaaatttttgagtgtaccatagaatttgcctt 17833929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 31760051 - 31759991
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||| ||||| | ||||||  ||||||||||||||||||||||||||| ||||||||||    
T  31760051 aatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccataaaatttgcctt 31759991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 48460589 - 48460653
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttta 95  Q
    |||||| ||||| | ||||||  ||||||||||||||||||||||||||||||||| ||| ||||    
T  48460589 aatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaatttacctattta 48460653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 4969940 - 4969893
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||    
T  4969940 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtat 4969893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 27956460 - 27956377
Alignment:
Q  7 caaaaaataacacatttaactattaatttgtt-gattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||    |||| | |||||||||| ||||||||| ||  |||||||||||||||||||    
T  27956460 caaaaaataactcatttaactattaattttaaagatttggtgtaccaatatactcaaattgttaggtgtaccatagaatttgcc 27956377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 29692551 - 29692598
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||||    
T  29692551 atgtgcaaatttgtacatgttaagaagtttaaaatagaaatttggtat 29692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 43069166 - 43069078
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||| |||||||||||||||||  ||||||||||  | ||| | ||||||||||||||||| | |||  |||||||||| ||||||||||    
T  43069166 tctctccaaaaaataacacattt--ctattaatttaataatttggtgtaccaatacactcaagtctttaggtgtaccataaaatttgcctt 43069078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 46836904 - 46836987
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||||| ||||||| |||| |||||| |||||| ||| |||||||||| | ||| |||||  ||||||||| |||||    
T  46836904 tcttcaaaaaatatcacatttgactactaatttattgatttgatataccaatacatttaaaattttggatgtaccataaaattt 46836987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 47748122 - 47748205
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||||||| |||||||||||||||||   || | | | |||||||||| ||||||||||  |||||||||| |||||    
T  47748122 tcttcaaaaaataactcatttaactattaatttaaggacttggtataccaatacattcaaatttttaggtgtaccataaaattt 47748205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 41331811 - 41331729
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||| ||||   |||| | |||||||||||||||||||| ||  |||||||||| || |||||    
T  41331811 caaaaaataactcatttaactattgatttaaggatttggtgtaccaatacactcaaattgttaggtgtaccataaaacttgcc 41331729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 2088900 - 2088868
Alignment:
Q  57 actcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||||||||||||    
T  2088900 actcaaatttttgagtgtaccatagaatttgcc 2088868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 8561628 - 8561569
Alignment:
Q  90 tttttattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtatatgaa 150  Q
    ||||||| ||||||||||||| |||||||||||  || |||||||||||||||||| ||||    
T  8561628 tttttatcatgtgcaaatttg-acatgttaagacgtttaaaatagaaattttgtatttgaa 8561569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 8770695 - 8770770
Alignment:
Q  13 ataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||  ||||| | |||||||||||| | || | |||| ||||| |||||||||||||    
T  8770695 ataacacatttaactattaatttaatgatttggtgtaccaatacagttaattctttgtgtgta-catagaatttgcc 8770770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 33072148 - 33072112
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||||||||||||||||||| |||||||    
T  33072148 atgtgcaaatttgtacatgttaagaaatttaaaatag 33072112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 41311139 - 41311052
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||||   |||||| |||||||||  |  |||| ||||||  |||||||||| | |||||||||||||||||||||||||    
T  41311139 tcttcaaaaaataatcaatttaattattaatttaatatttgg-tgtaccggtacactcaaaatgttgagtgtaccatagaatttgcctt 41311052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 26037260 - 26037213
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| | |||||||||| || ||||||||||||||||||    
T  26037260 atgtgcaaatttgcagatgttaagaagtttaaaatagaaattttgtat 26037213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 27569643 - 27569678
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||| ||||||||||||||||||||    
T  27569643 tacactcaaattttttagtgtaccatagaatttgcc 27569678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 29398145 - 29398192
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    |||| |||||||| |||||||||||| || ||||||||||||||||||    
T  29398145 atgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtat 29398192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 33343155 - 33343108
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| ||||||||||||||| ||||||| || |||||||    
T  33343155 atgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtat 33343108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 34363984 - 34364019
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||| |||||||||||||||||||||||||    
T  34363984 tacactcaaacttttgagtgtaccatagaatttgcc 34364019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 36032550 - 36032601
Alignment:
Q  94 tattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||| ||||||  ||||||||||||||| |||||| |||||||||||    
T  36032550 tattatgtgaaaattttcacatgttaagaaatttaaaataaaaattttgtat 36032601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 42711013 - 42710930
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||    ||| | ||||||||| |||| ||||| ||   |||||||||||||||||||    
T  42711013 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatgcacttaaattattagatgtaccatagaatttgcct 42710930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 45501626 - 45501579
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| |||| ||||||| || ||||||||||||||||||    
T  45501626 atgtgcaaatttgcacatcttaagaagtttaaaatagaaattttgtat 45501579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 15715991 - 15715902
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| ||| ||||||||||| |||||   || ||| ||||||  ||||||||||| |  || |||||||||||||||||||||    
T  15715991 tcttcaaaaaacaactcatttaactatgaatttaaagagtgggtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcctt 15715902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 27800399 - 27800436
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  27800399 tacactcaaatttttggatgtaccatagaatttgcctt 27800436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 34118565 - 34118528
Alignment:
Q  5 ttcaaaaaataacacatttaactattaatttgttgatt 42  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  34118565 ttcaaaaaataacacatttagctattaatttattgatt 34118528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 41968747 - 41968832
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgag-tgtaccatagaatttgccttt 92  Q
    |||||||||| |||||||| ||||||||   || ||  |||||| |||||||||||| | | || |||||||||||||||||||||    
T  41968747 aaaaaataactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattaggtgtaccatagaatttgccttt 41968832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 1343054 - 1343018
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  1343054 tacactcaaattgttgggtgtaccatagaatttgcct 1343018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 1806568 - 1806484
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaattt 86  Q
    ||||||||||| |||  ||||||||||||||||   || | | ||||||  ||||||||||| | ||||||||||||||||||||    
T  1806568 tcttcaaaaaacaacttatttaactattaatttaaagagtaggtgtaccggtacactcaaatatattgagtgtaccatagaattt 1806484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 10210021 - 10209985
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  10210021 tacactcaaatatttgaatgtaccatagaatttgcct 10209985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 22904850 - 22904902
Alignment:
Q  41 ttggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttt 93  Q
    |||||||||||  |||||||||| | ||| |||||||||| ||||||||||||    
T  22904850 ttggatgtaccggtacactcaaaatgttgggtgtaccataaaatttgcctttt 22904902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 23574402 - 23574354
Alignment:
Q  54 tacactcaaattttt-gagtgtaccatagaatttgcctttttattatgt 101  Q
    ||||||||||||||| ||||||||||||||| |||||| ||| ||||||    
T  23574402 tacactcaaatttttcgagtgtaccatagaaattgcctatttgttatgt 23574354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 34270428 - 34270392
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  34270428 atgtgcaaatttgcacatgttaagaaatttaaaatag 34270392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 46290177 - 46290141
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  46290177 atgtgcaaatttgcacatgttaagaaatttaaaatag 46290141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 632966 - 633054
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  632966 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 633054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 26011260 - 26011358
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttattat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||| |||||| |||||| ||||    
T  26011260 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtatcaatacactcaaatttttgggtgtaccataaaatttgtcttttttttat 26011358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 48616773 - 48616853
Alignment:
Q  9 aaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48616773 aaaaataacacatttaactattaatttattgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 48616853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 42317147 - 42317231
Alignment:
Q  5 ttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| ||||||||    
T  42317147 ttcaaaaaataacacatttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccatataatttgcc 42317231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 28791686 - 28791775
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||||||||||||||||||||||||||||| | | ||||||||||||| |||||||||||||||||| || |||||||||    
T  28791686 tctcttcaaaaaataacacatttaactattaatttgttgacttggtgtaccaatacacccaaatttttgagtgtaccgtaaaatttgcct 28791775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 9166957 - 9166872
Alignment:
Q  5 ttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||| |||||| ||| |||||||||    
T  9166957 ttcaaaaaataacacatttaactattaatttattgatttggtgtaccaatacactcaaatttttgggtgtactatataatttgcct 9166872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 33906407 - 33906317
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||   ||||||||| ||||| ||||    
T  33906407 tctcttcaaaaaataacacatttaactattaatttgttgattgagtgtaccaatatactcaaatttttagatgtaccatataatttacctt 33906317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 33098982 - 33099066
Alignment:
Q  10 aaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttt 94  Q
    |||||||||||||||||||||||||| ||||||   |||||||||||||||||||| |||| ||||||||| |||||||||||||    
T  33098982 aaaataacacatttaactattaatttattgattttgtgtaccaatacactcaaattgttgaatgtaccatataatttgccttttt 33099066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 51985016 - 51984936
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||||| |||||||||||||||||   |||| |||||||||||||||||||||| |||||||||||||||||||||    
T  51985016 caaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaattattgagtgtaccatagaatttg 51984936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2247155 - 2247069
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||||||||| |||||||||||||||||||  ||||| | ||||||||||||||||||| |||  |||||||||||||||||    
T  2247155 tctcttcaaaaaatagcacatttaactattaatttaatgatttggtgtaccaatacactcaaatctttaggtgtaccatagaatttg 2247069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 11778954 - 11779040
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    |||||||||||||||| ||||||||||||||||||  ||||| | ||||||||||||||||||| |||| |||||||||| ||||||    
T  11778954 tctcttcaaaaaataaaacatttaactattaatttaatgatttgttgtaccaatacactcaaatctttgggtgtaccatataatttg 11779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 50239552 - 50239642
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||||||||||||||||||||||||||||  |||||   |||||||||||||||| || ||||| || |||||||||||||||||    
T  50239552 tctcttcaaaaaataacacatttaactattaatttaatgatttagtgtaccaatacactcatatatttgaatgcaccatagaatttgcctt 50239642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 31931022 - 31931105
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   |||| |||||||||||||||||||||| |||  |||||||||||||||||||    
T  31931022 caaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaattgttggatgtaccatagaatttgcct 31931105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 51184123 - 51184044
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||| ||||||||||||||||||  ||||| | ||||||||||||||||||| |||| |||||||||||||||||    
T  51184123 aaaaaataaaacatttaactattaatttaatgatttgttgtaccaatacactcaaatctttgggtgtaccatagaatttg 51184044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 922166 - 922248
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| |||||||||||||||||||    
T  922166 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 922248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 27295140 - 27295058
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| |||||||||||||||||||    
T  27295140 caaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 27295058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 35910250 - 35910160
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||||||||||||||||||||||||| |||| | | ||||||||||||| ||||  ||| | ||||||||||||||| ||||    
T  35910250 tctcttcaaaaaataacacatttaactattaatttattgacttggtgtaccaatacacccaaaaattttaatgtaccatagaattttcctt 35910160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 52260899 - 52260817
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatt 85  Q
    ||||||||| ||||||||||||||||||||||| |||||| | |||||||||||| |||| | ||||||||||||||| ||||    
T  52260899 tcttcaaaagataacacatttaactattaatttattgatttggtgtaccaatacattcaattctttgagtgtaccatataatt 52260817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 16482658 - 16482574
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||| ||||| ||| |||||||||||||||||||||    
T  16482658 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattattgggtgtaccatagaatttgcctt 16482574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 51781428 - 51781507
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| ||||||||||||||||    
T  51781428 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaattt 51781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2620734 - 2620648
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||||||||||||||||||||||||||||| ||||||   |||||||||| |  |||||||||   ||||||||||||||||    
T  2620734 tctcttcaaaaaataacacatttaactattaatttattgatttagtgtaccaatatatccaaatttttagatgtaccatagaatttg 2620648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 18641970 - 18641888
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   ||||   |||||||||||||||||||| ||||||||||||||||| |||||    
T  18641970 caaaaaataactcatttaactattaatttaaggatttagtgtaccaatacactcaaattgttgagtgtaccatagaacttgcc 18641888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 23304495 - 23304405
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||| ||||||||||||||||||||||||||||  |||||   |||||||||||||||  || |||| |||||||||||| ||||||||    
T  23304495 tctcttaaaaaaataacacatttaactattaatttaatgattttgtgtaccaatacactcgtatctttgggtgtaccatagattttgcctt 23304405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 26102794 - 26102876
Alignment:
Q  4 cttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    |||||||||||||| |||||||||||||||||   |||| | |||| ||||||||| ||||| ||||||||||||||||||||    
T  26102794 cttcaaaaaataactcatttaactattaatttaaggatttggtgtatcaatacacttaaattattgagtgtaccatagaattt 26102876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 50905663 - 50905581
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| ||||||||||||| |||||    
T  50905663 caaaaaataactcatttaactattaatttaaggattcggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 50905581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 52303094 - 52303012
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||| |||||||||||||||||    ||| |||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  52303094 aaaaaataactcatttaactattaatttaagaatttgatgtaccaatacactcaaattattgggtgtatcatagaatttgcct 52303012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 28493892 - 28493807
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    ||||||||||| |||||||||||||||||   |||| | |||| ||||||||| ||||| ||| ||||||||||||||||||||||    
T  28493892 caaaaaataactcatttaactattaatttaaggatttggtgtaacaatacacttaaattattgggtgtaccatagaatttgccttt 28493807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 35305233 - 35305148
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    |||||||||||  ||||||||||||||||    ||| | |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  35305233 caaaaaataacttatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgccttt 35305148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 47719291 - 47719379
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||||||||||| | ||||||||||  ||||| |||||||||||||||| |||||||||| ||||   ||||||||||||    
T  47719291 tctcttcaaaaaataacacatt-acctattaatttaatgatttgatgtaccaatacacttaaatttttgaatgtattgtagaatttgcct 47719379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7122045 - 7121957
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||| |||||||| || ||||||||||||||||||  ||||| | ||||||||||||||||||| |||  || ||||||||||||||||    
T  7122045 tctcgtcaaaaaacaaaacatttaactattaatttaatgatttgttgtaccaatacactcaaatctttaggtataccatagaatttgcc 7121957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 45423691 - 45423607
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||| ||||| |||  |||||||||||| |||||||    
T  45423691 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttggatgtaccatagaacttgcctt 45423607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 46771056 - 46771144
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttta 95  Q
    ||||||||||| |||||||||||||||||   |||| | | |||||||||||||||||| ||  ||||||||||||| |||||| ||||    
T  46771056 caaaaaataactcatttaactattaatttaaggatttggtataccaatacactcaaattgttaggtgtaccatagaacttgcctattta 46771144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 51519864 - 51519788
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaa 83  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| ||| |||||||||||||    
T  51519864 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaa 51519788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 7435571 - 7435512
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||| ||||| | ||||||  |||||||||||||||||||||||||||||||||||||    
T  7435571 aatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaatttgcct 7435512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 34256532 - 34256449
Alignment:
Q  10 aaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttt 93  Q
    |||||||| | ||||| |||||||||  | ||| | |||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  34256532 aaaataactcgtttaattattaatttaataatttggtgtaccgatacactcaaattgttgggtgtaccatagaatttgcctttt 34256449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 38262458 - 38262541
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||| ||||||||    ||| | |||||||||||||||||||| || |||||||||||||| ||||||    
T  38262458 caaaaaataactcatttaacaattaatttaagaatttggtgtaccaatacactcaaattgttaagtgtaccatagaacttgcct 38262541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 41073352 - 41073269
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||  |||||||||||||||||   ||||   |||||||||||||||||||  ||| ||||||||||||||||||||    
T  41073352 caaaaaataattcatttaactattaatttaaggattttgtgtaccaatacactcaaatggttgggtgtaccatagaatttgcct 41073269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 5956851 - 5956933
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||| ||||| ||| |||||||||| ||||||||    
T  5956851 caaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacacttaaattgttgggtgtaccatataatttgcc 5956933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 8461850 - 8461932
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||  |||  |||||||||||| |||||    
T  8461850 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaatggttggatgtaccatagaagttgcc 8461932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 27352935 - 27352845
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||||| |||||||||||||||||||||   | |||   |||| |||||||||||||| ||||  ||||||||||||||| ||||    
T  27352935 tctcttcaaaaactaacacatttaactattaattcaataattttgtgtatcaatacactcaaatctttggatgtaccatagaatttacctt 27352845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 35874258 - 35874348
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaattt-ttgagtgtaccatagaatttgccttt 92  Q
    ||||||||||| |||  ||||||||||||||||   || ||  ||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  35874258 tcttcaaaaaacaacttatttaactattaatttaaagagtgagtgtaccaatacactcaaatatattgggtgtaccatagaatttgccttt 35874348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 37498826 - 37498744
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||  ||||||||||||||||    ||| | |||||||||||||||||||| |||  ||||||||||||||||||    
T  37498826 caaaaaataacttatttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 37498744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 39190881 - 39190963
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| |||  |||||||||||| |||||    
T  39190881 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaacttgcc 39190963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 89
Target Start/End: Complemental strand, 24451773 - 24451738
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||||||||||||||||||||||||    
T  24451773 tacactcaaatttttgagtgtaccatagaatttgcc 24451738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 28016351 - 28016300
Alignment:
Q  94 tattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||||||| |||||||||||| || |||||| |||||||||||    
T  28016351 tattatgtgcaaatttgcacatgttaagaattttaaaatataaattttgtat 28016300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 36275039 - 36275102
Alignment:
Q  5 ttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaattttt 68  Q
    |||||||||||||||||||||||| |||||| |||||| | | ||  |||||||||||||||||    
T  36275039 ttcaaaaaataacacatttaactactaatttattgatttggtatattaatacactcaaattttt 36275102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 48977196 - 48977283
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaattt-ttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||  ||||||||||||||||   || ||| ||||||  ||||||||||| | |||||||||||||||||||||||    
T  48977196 tcttcaaaaaacaacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgagtgtaccatagaatttgcc 48977283  T

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Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 51369372 - 51369329
Alignment:
Q  46 tgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  51369372 tgtatcaatacactcaaattgttgagtgtaccatagaatttgcc 51369329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 31075935 - 31076017
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcc 89  Q
    |||||||||| ||||||| |||||||||  ||| ||| ||||||  ||||||||||| | ||| |||||||||||||||||||    
T  31075935 aaaaaataactcatttaattattaatttaatgaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 31076017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 45650088 - 45650006
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||| | ||| | ||| |||||| ||||| | ||||||  ||||||||||||||| | |||||||||||||||||||    
T  45650088 aaaaaataactcgtttcaatataaatttgatgatttggtgtaccggtacactcaaattttttaatgtaccatagaatttgcct 45650006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 4155825 - 4155788
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  4155825 tacactcaaatatttgagtgtaccatagaatttgcctt 4155788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 38207879 - 38207936
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgc 88  Q
    |||||| ||||| | |||||| ||||||||||||||||||| |||||||| |||||||    
T  38207879 aatttgatgatttggtgtaccgatacactcaaatttttgagcgtaccatataatttgc 38207936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 44246322 - 44246403
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgc 88  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||| || || |||||  | |||||||||||||||    
T  44246322 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacattcgaacttttggatataccatagaatttgc 44246403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 6520310 - 6520382
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccata 80  Q
    |||||||||  |||||||||||||||||    ||| |||||||||||||||||||||| |||  |||||||||    
T  6520310 aaaaaataattcatttaactattaatttaaaaattcgatgtaccaatacactcaaattgttggatgtaccata 6520382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 51056283 - 51056192
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgccttttt 94  Q
    |||||||||||||||  ||||||||||||||||   || ||| ||||||  ||||||||||| | ||  ||||||||||||||||||||||||    
T  51056283 tcttcaaaaaataacttatttaactattaatttaaagagtgg-tgtaccggtacactcaaatatattaggtgtaccatagaatttgccttttt 51056192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 477754 - 477841
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| ||| |||||||| ||||||||   || ||  |||||| |||||||||||| | ||| |||||||||||||||||||    
T  477754 tcttcaaaaaacaactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 477841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 5875226 - 5875269
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaatttt 141  Q
    ||||||||||||| |||||||||||| || ||||||||||||||    
T  5875226 atgtgcaaatttgcacatgttaagaagtttaaaatagaaatttt 5875269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 6180353 - 6180310
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaatttt 141  Q
    ||||||||||||| |||||||||||| || ||||||||||||||    
T  6180353 atgtgcaaatttgcacatgttaagaagtttaaaatagaaatttt 6180310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 10179191 - 10179222
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  10179191 tctcttcaaaaaataacacatttaactattaa 10179222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 13322043 - 13321996
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| | |||||||||| || ||||||||||||||||||    
T  13322043 atgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgtat 13321996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 23056847 - 23056768
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||| ||||| |||  ||||||||| |||||    
T  23056847 caaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacacttaaattattggatgtaccatataattt 23056768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 35512892 - 35512849
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaatttt 141  Q
    ||||||||||||| |||||||||||| || ||||||||||||||    
T  35512892 atgtgcaaatttgcacatgttaagaagtttaaaatagaaatttt 35512849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 38812907 - 38812864
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaatttt 141  Q
    ||||||||||||| |||||||||||| || ||||||||||||||    
T  38812907 atgtgcaaatttgcacatgttaagaagttcaaaatagaaatttt 38812864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 39310797 - 39310844
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| ||||||||| || || ||||||||||||||||||    
T  39310797 atgtgcaaatttgcacatgttaaaaagtttaaaatagaaattttgtat 39310844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 41676571 - 41676618
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| ||||||||||||||| ||||||  ||||||||||    
T  41676571 atgtgcaaatttgcacatgttaagaaattcaaaataataattttgtat 41676618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 44263728 - 44263641
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaattt-ttgagtgtaccatagaatttgccttttt 94  Q
    |||||| ||| |||||||||||||||||   ||  |  |||| |||||||||||||| | ||| ||||||||||||||||||||||||    
T  44263728 aaaaaacaactcatttaactattaatttaaagagcgagtgtatcaatacactcaaatatattgggtgtaccatagaatttgccttttt 44263641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 47693293 - 47693206
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| ||| | |||||||||||||||   || |||||||| |  ||||||||||| | ||| |||||||||||||||||||    
T  47693293 tcttcaaaaaacaactcttttaactattaatttaaagagtggatgtatcggtacactcaaatatattgggtgtaccatagaatttgcc 47693206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 51787788 - 51787875
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| ||| |||||||||||||||||   || ||| ||||||  ||||||||||| | |||  ||||||||||||||||||    
T  51787788 tcttcaaaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattggatgtaccatagaatttgcc 51787875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 51920442 - 51920485
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaatttt 141  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||    
T  51920442 atgtgcaaatttgcacatgttaataaatttaaaatagaaatttt 51920485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 5360523 - 5360612
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttt 93  Q
    ||||||||||| ||   |||||| |||||||||  || |||| ||||||  |||||||||| | ||| |||||||||||||||||||||||    
T  5360523 tcttcaaaaaacaatcaatttaattattaatttaatgtttgg-tgtaccggtacactcaaaatgttgggtgtaccatagaatttgcctttt 5360612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 91
Target Start/End: Complemental strand, 44808432 - 44808402
Alignment:
Q  61 aaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||||||||||||||||||||||||    
T  44808432 aaatttttgagtgtaccatagaatttgcctt 44808402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 12837807 - 12837774
Alignment:
Q  53 atacactcaaatttttgagtgtaccatagaattt 86  Q
    |||||||||||||||| |||||||||||||||||    
T  12837807 atacactcaaattttttagtgtaccatagaattt 12837774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 26424166 - 26424247
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||| ||| ||||||| |||||||||  | |||   ||||||  |||||||||||| |||||| ||||||||||||||||    
T  26424166 aaaaaacaactcatttaattattaatttaataatttagtgtaccggtacactcaaattgttgagtataccatagaatttgcc 26424247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 44978950 - 44978869
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||| ||| | ||||| |||||||||  | ||| | ||||||  |||||||||||| ||| |||||||||||||||||||    
T  44978950 aaaaaaaaactcgtttaattattaatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgcc 44978869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 47209082 - 47209049
Alignment:
Q  53 atacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||||||||| ||||||||||||||||    
T  47209082 atacactcaaatttttgggtgtaccatagaattt 47209049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 51991567 - 51991530
Alignment:
Q  53 atacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  51991567 atacacttaaattttggagtgtaccatagaatttgcct 51991530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 1502731 - 1502767
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  1502731 atgtgcaaatttgcacatgttaagaaatttaaaatag 1502767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 23576425 - 23576461
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  23576425 atgtgcaaatttgcacatgttaagaaatttaaaatag 23576461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 24381398 - 24381314
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||| |||||||||||||||||   || ||  ||||||  ||||||||||| | ||  |||||||||||||||||||||    
T  24381398 aaaaaataactcatttaactattaatttaaagagtgagtgtaccggtacactcaaatctattaggtgtaccatagaatttgcctt 24381314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 32144988 - 32145048
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaa 63  Q
    ||||||||||||||| ||||||||||| |||||   |||| ||||||||  ||||||||||    
T  32144988 tcttcaaaaaataactcatttaactataaatttaaggatttgatgtaccggtacactcaaa 32145048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 35534243 - 35534283
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgccttttt 94  Q
    |||||||||| | ||| ||||||||||||||||||||||||    
T  35534243 tacactcaaaatattgggtgtaccatagaatttgccttttt 35534283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 38260889 - 38260801
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgag-tgtaccatagaatttgcct 90  Q
    ||||||||||| |||  ||||||||||||||||   || ||| ||||||  ||||||||||| | | || |||||||||||||||||||    
T  38260889 tcttcaaaaaacaacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattagatgtaccatagaatttgcct 38260801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 38862215 - 38862175
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgccttttt 94  Q
    |||||||||||||||  |||||||||||||||||| |||||    
T  38862215 tacactcaaatttttaggtgtaccatagaatttgcattttt 38862175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 41321370 - 41321406
Alignment:
Q  47 gtaccaatacactcaaatttttgagtgtaccatagaa 83  Q
    ||||||||||||||||| || ||||||||||||||||    
T  41321370 gtaccaatacactcaaaattgtgagtgtaccatagaa 41321406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 45673377 - 45673333
Alignment:
Q  39 gattggatgtaccaatacactcaaatttttgagtgtaccatagaa 83  Q
    |||| |||||| ||||||||||||||| ||| |||||||||||||    
T  45673377 gatttgatgtatcaatacactcaaattgttgggtgtaccatagaa 45673333  T

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Target: chr4 (Bit Score: 81; Significance: 5e-38; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 47302484 - 47302392
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttt 93  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  47302484 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccataaaattttcctttt 47302392  T

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Target: chr4; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 46216090 - 46216179
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||    
T  46216090 tctcttcaaaaaataacacatttaattattaatttgttgattgggtgtaccaatacactcaaatttttgggtgtacaatagaatttgcct 46216179  T

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Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 39162123 - 39162212
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||||||||||||||||||||||||||| |||| | | ||||||||||||| |||||||||||||||||||||||||| ||||    
T  39162123 tctcttcaaaaaataacacatttaactattaatttattgacttggtgtaccaatacacccaaatttttgagtgtaccatagaattggcct 39162212  T

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Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 56361631 - 56361721
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttt 93  Q
    ||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||  ||||| |||||||||||||||||    
T  56361631 tctcttcaaaaaataacacatttaactattaatttattgatttggtgtaccaatacactcaaattttt--gtgtaacatagaatttgcctttt 56361721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 53695715 - 53695800
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||||||||| | |||||||||||||||    
T  53695715 tctcttcaaaaaataacacatttgactattaattttttgatttgatgtaccaatacattcaaatttttaaatgtaccatagaattt 53695800  T

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Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 29646710 - 29646622
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaa-tttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||||||||| |||||||||||||||| |||||| | |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  29646710 tcttcaaaaaataacatatttaactattaatttattgatttggtgtaccaatacactcaaaatttttga-tgtaccatagaatttgcctt 29646622  T

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Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 36091147 - 36091054
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttt 94  Q
    |||||||||||||||||||||||||||||||||||  ||||| | |||||||||||||||| || ||||  ||||||||| |||||||||||||    
T  36091147 tctcttcaaaaaataacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttggatgtaccatataatttgccttttt 36091054  T

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Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9858332 - 9858241
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    |||||||||||||||||||||||||||||||||||  ||||| | |||| ||||||||||| || |||| |||||| |||||||||||||||    
T  9858332 tctcttcaaaaaataacacatttaactattaatttaatgatttggtgtatcaatacactcatatctttgggtgtactatagaatttgccttt 9858241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 31681425 - 31681336
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||| |||||||||||| |||||||||||||| |||||| | |||||||||||||  ||||||||  ||||||||||||||||||||    
T  31681425 tctcttcgaaaaataacacacttaactattaatttattgatttggtgtaccaatacaccaaaatttttaggtgtaccatagaatttgcct 31681336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 31908531 - 31908442
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||| ||||||||||||||||||||  ||||| | |||||||||||||||| || |||| ||||| ||||||||||||||    
T  31908531 tctcttcaaaaaatcacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtatcatagaatttgcct 31908442  T

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Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 14802794 - 14802711
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   |||| | |||| ||||||||||||||| ||||||||||||||||||||||||    
T  14802794 caaaaaataactcatttaactattaatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgcct 14802711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 46004642 - 46004726
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatt 85  Q
    ||||||||||||||||||||||| || |||||| | || ||| | ||||||||||||||||||||||||  ||||||||||||||    
T  46004642 tctcttcaaaaaataacacattttacgattaatatattaatttggtgtaccaatacactcaaatttttggatgtaccatagaatt 46004726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 3716407 - 3716325
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| |||  ||||||||||||||||||    
T  3716407 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcc 3716325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 27538997 - 27538915
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| ||||||||||||| |||||    
T  27538997 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 27538915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 41759985 - 41760067
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| |||  ||||||||||||||||||    
T  41759985 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 41760067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 51436138 - 51436220
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| ||| |||||||||||||||||||    
T  51436138 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 51436220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 1414426 - 1414510
Alignment:
Q  10 aaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttt 94  Q
    |||| |||||||||||||||||||||  ||||| | ||||||||||||||||||| |||  |||| ||||| |||||||||||||    
T  1414426 aaaaaaacacatttaactattaatttaatgatttggtgtaccaatacactcaaatctttaggtgtgccataaaatttgccttttt 1414510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 12756060 - 12756000
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||| ||||| | |||||| |||||||||||||||||||||||||||||||||||||||    
T  12756060 aatttgatgatttggtgtaccgatacactcaaatttttgagtgtaccatagaatttgcctt 12756000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 34280553 - 34280637
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||||  ||||||||||||||||   |||| | |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  34280553 caaaaaataacttatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcctt 34280637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 36592357 - 36592437
Alignment:
Q  5 ttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatt 85  Q
    ||||||||||||| |||||||||||||||||   |||| | |||| ||||||||||||||||||| |||||||||| ||||    
T  36592357 ttcaaaaaataactcatttaactattaatttaaggatttggtgtaacaatacactcaaatttttgggtgtaccataaaatt 36592437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 43137689 - 43137781
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttattat 99  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||| ||||| ||| ||||||||||||| ||||||| |||||||    
T  43137689 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgccttattattat 43137781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 28037767 - 28037685
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||| |||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| ||| |||||||||||||||    
T  28037767 caaaaagtaactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgcaccatagaatttgcc 28037685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 30342907 - 30342825
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||  ||| |||||||||| ||||||||    
T  30342907 caaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaatggttgggtgtaccatataatttgcc 30342825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 30539651 - 30539569
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||| ||||| ||| ||||||||||||| |||||    
T  30539651 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 30539569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 18425455 - 18425524
Alignment:
Q  20 atttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||||  ||||| | |||||||||||||||| || |||| |||||||||||||||||||    
T  18425455 atttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 18425524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 54 - 99
Target Start/End: Original strand, 39103910 - 39103955
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctttttattat 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  39103910 tacactcaaatttttgagtgtaccatagaatttgccttttttttat 39103955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 44957267 - 44957323
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    |||||| ||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  44957267 aatttgatgatttggtgtaccgatacactcaaatttttgagtgtaccatagaatttg 44957323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 52589153 - 52589077
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaa 83  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| |||  ||||||||||||    
T  52589153 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatagaa 52589077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 19450907 - 19450958
Alignment:
Q  94 tattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||    
T  19450907 tattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtat 19450958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 19468365 - 19468314
Alignment:
Q  94 tattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||    
T  19468365 tattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtat 19468314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 48262647 - 48262565
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    |||||||||||||||  |||||| |||||||||  || |||| |||||| ||||||||||| |||| |||||||||||||||||    
T  48262647 tcttcaaaaaataactaatttaattattaatttaatgtttgg-tgtaccgatacactcaaaattttaagtgtaccatagaattt 48262565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 38835932 - 38835854
Alignment:
Q  9 aaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||| ||| |||||||||||||||||    ||| |||||||||||||||||||||| ||  |||||||||||||||||    
T  38835932 aaaaaaaactcatttaactattaatttaagaatttgatgtaccaatacactcaaattattaggtgtaccatagaatttg 38835854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 52809269 - 52809351
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| |||  |||||||||| ||||||||    
T  52809269 aaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacactcaaattgttggatgtaccatagtatttgcct 52809351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 37855203 - 37855118
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    ||||||||||| |||||||||||||||||   |||| | |||||| ||||||||||||| ||  || || ||||||||||||||||    
T  37855203 caaaaaataactcatttaactattaatttaaggatttggtgtacctatacactcaaattgttaggtatatcatagaatttgccttt 37855118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 48579234 - 48579315
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||| |||||||||||||||||   |||| | |||||||||||| ||||||| |||  ||||||||| ||||||||    
T  48579234 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacattcaaattgttggatgtaccatataatttgcc 48579315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 9356702 - 9356790
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| ||| |||||||||||||||||   || || || |||||||||||| |||| | ||| ||||||||||||||||||||    
T  9356702 tcttcaaaaaacaactcatttaactattaatttaaagactgaatttaccaatacactaaaatatattgggtgtaccatagaatttgcct 9356790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 40049729 - 40049681
Alignment:
Q  94 tattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttg 142  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  40049729 tattatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttg 40049681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 53973828 - 53973864
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||||||||||||||||||||||||||    
T  53973828 tacactcaaatttttgagtgtaccatagaatttgcct 53973864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 18882278 - 18882325
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||    
T  18882278 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtat 18882325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 40439006 - 40439041
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||||||||||||||||||||||||    
T  40439006 tacactcaaatttttgagtgtaccatagaatttgcc 40439041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 53389171 - 53389253
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatt-tttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   ||||   |||||| ||||||||||||| ||||| ||||||||||||||||||    
T  53389171 caaaaaataactcatttaactattaatttaaagatttagtgtaccgatacactcaaattgtttga-tgtaccatagaatttgcc 53389253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 53936832 - 53936919
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| ||| |||||||||||||||||   || ||| ||||||  ||||||||||| | ||| |||||||||||||||||||    
T  53936832 tcttcaaaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 53936919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 18052264 - 18052346
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||| | ||||| |||||||||  | ||| ||||||||  |||||||||||| || ||||||| |||||||||||||    
T  18052264 aaaaaataactcgtttaattattaatttaataatttgatgtacccctacactcaaattgttaagtgtactatagaatttgcct 18052346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 24685018 - 24684960
Alignment:
Q  84 tttgcctttttattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttg 142  Q
    |||| |||| ||| ||||||||||||| |||||||||||| || |||||||||||||||    
T  24685018 tttgtctttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttg 24684960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 38975356 - 38975277
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||| |||||||||||||||||   ||||   ||||| |||||||||||  ||||| |||||||||||||||||||    
T  38975356 aaaaaataactcatttaactattaatttaaagattttgtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 38975277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 39380719 - 39380805
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||| |||||| ||| ||||||| | |||||||  ||||| | ||||||  |||||| |||||||||| ||||||||||||||||||    
T  39380719 tcttaaaaaaaaaactcatttaattgttaatttaatgatttggtgtaccggtacacttaaatttttgaatgtaccatagaatttgcc 39380805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 30891453 - 30891494
Alignment:
Q  48 taccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  30891453 taccaatacactcaaatctttgggtgtaccatagaatttgcc 30891494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 31296890 - 31296927
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  31296890 tacactcaaattttttagtgtaccatagaatttgcctt 31296927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 47302113 - 47302025
Alignment:
Q  7 caaaaaataacacatttaactatta--atttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttt 93  Q
    |||||| |||| |||||||||||||  ||||   |||| |||||||||||||||||||||| ||  ||| |||||| ||||||||||||    
T  47302113 caaaaagtaactcatttaactattataatttaaggatttgatgtaccaatacactcaaattgttaggtgcaccataaaatttgcctttt 47302025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 49288579 - 49288534
Alignment:
Q  46 tgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||||||||||||  | ||||||||||||||||||||    
T  49288579 tgtaccaatacactcaaattttcaattgtaccatagaatttgcctt 49288534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 4490909 - 4490873
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||||||||||||||| |||||||||||||    
T  4490909 tacactcaaatttttgagtgtactatagaatttgcct 4490873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 19526760 - 19526724
Alignment:
Q  53 atacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||| |||||||||||||||||||||||||||||    
T  19526760 atacacttaaatttttgagtgtaccatagaatttgcc 19526724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 32737560 - 32737596
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||| ||||||||||||||||||||||||    
T  32737560 tacactcaaattattgagtgtaccatagaatttgcct 32737596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 48066329 - 48066413
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||   ||| ||||||||||||  ||||| | | |||||||||||||||||  |||  ||||||||||||||||||||    
T  48066329 caaaaaataatttattgaactattaatttaatgatttggtataccaatacactcaaatgattggatgtaccatagaatttgcctt 48066413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 31975607 - 31975548
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||| ||||| | ||||||  |||| |||||||||| |||||||||||||||||||||    
T  31975607 aatttgatgatttggtgtaccggtacattcaaatttttaagtgtaccatagaatttgcct 31975548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 44916654 - 44916701
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| |||| |||| ||||| ||||||||||||||||||    
T  44916654 atgtgcaaatttgcacatattaaaaaatttaaaatagaaattttgtat 44916701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 46041783 - 46041700
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   |||| | |||| ||||||||||||||| |||  |||||  ||||| ||||||    
T  46041783 caaaaaataactcatttaactattaatttaaagatttggtgtatcaatacactcaaattgttggatgtactttagaacttgcct 46041700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 89
Target Start/End: Complemental strand, 46688137 - 46688102
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||||| |||||||||    
T  46688137 tacactcaaatttttgagtgtaccattgaatttgcc 46688102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 52391465 - 52391418
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||| ||||||| |||||||||||| || ||||||||||||||||||    
T  52391465 atgtgtaaatttgcacatgttaagaagtttaaaatagaaattttgtat 52391418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 52405591 - 52405536
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    |||||| ||||| | ||||||  |||||||||||||||||||||||| ||||||||    
T  52405591 aatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccctagaattt 52405536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 1792148 - 1792233
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| ||   |||||| |||||||||  || |||| ||||||  |||||||||| | |||||||||||||||||||||||    
T  1792148 tcttcaaaaaacaatcaatttaattattaatttaatgtttgg-tgtaccggtacactcaaaatattgagtgtaccatagaatttgcc 1792233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 44998455 - 44998409
Alignment:
Q  46 tgtaccaatacactcaaattt-ttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  44998455 tgtaccaatacacccaaatttattgggtgtaccatagaatttgcctt 44998409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 595643 - 595680
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  595643 tacactcaaacttttgagtgtatcatagaatttgcctt 595680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 3690553 - 3690512
Alignment:
Q  46 tgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    |||||| ||||||||||| | |||||||||||||||||||||    
T  3690553 tgtaccgatacactcaaaatgttgagtgtaccatagaatttg 3690512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 17370597 - 17370689
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttat 96  Q
    ||||||||||| ||   |||||| |||||||||  || |||| ||||||  |||||||||| | ||| ||||||||||||||||||| ||||||    
T  17370597 tcttcaaaaaacaatcaatttaattattaatttaatgtttgg-tgtaccggtacactcaaaatgttgggtgtaccatagaatttgccattttat 17370689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 19842473 - 19842436
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  19842473 tacactcaaatttttggatgtaccatagaatttgcctt 19842436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 50352466 - 50352425
Alignment:
Q  101 tgcaaatttgtacatgttaagaaattgaaaatagaaattttg 142  Q
    |||||||||| ||||||||||||||| ||||||| |||||||    
T  50352466 tgcaaatttgcacatgttaagaaatttaaaatagtaattttg 50352425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 19594966 - 19594934
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||||||| |||||||||||||||||    
T  19594966 tacactcaaatttttaagtgtaccatagaattt 19594934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 24292022 - 24291978
Alignment:
Q  46 tgtaccaatacactcaaattt-ttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||    
T  24292022 tgtaccaatacacccaaatttattgggtgtaccatagaatttgcc 24291978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 24566735 - 24566771
Alignment:
Q  53 atacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||||  |||||||||||||||||||    
T  24566735 atacactcaaatttttaggtgtaccatagaatttgcc 24566771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 49286980 - 49287016
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||| |||||||||||||| |||||||||    
T  49286980 tacactcaaattattgagtgtaccataaaatttgcct 49287016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 55722558 - 55722474
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| || ||||||||||||||   ||||   |||||||||||| ||||||| ||   |||| |||||||||||||||    
T  55722558 caaaaaataactcaattaactattaatttaaggatttagtgtaccaatacattcaaattgttagatgtatcatagaatttgcctt 55722474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 5e-38; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 20212472 - 20212563
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttt 93  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  20212472 tctcttcaaaaaataacacatttaactattaatttgttgattgg-tgtaccaatacacttaaatttttgagtgtaccatagaatttgcctttt 20212563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 11598203 - 11598113
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  11598203 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcct 11598113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 37909467 - 37909379
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||    
T  37909467 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtactaatacactcaaatttttgagtgtactatagaatttgcc 37909379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 6513583 - 6513671
Alignment:
Q  2 ctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||| |||  ||||||||||||||||||||    
T  6513583 ctcttcaaaaaataacacatttaactattaatttattgatttagtgtaccaatacactcaaatctttaggtgtaccatagaatttgcct 6513671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6438493 - 6438580
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||||||||||||||  ||||| | |||||||||||||| | || ||||||||||||||||||||||||    
T  6438493 tctcttcaaaaaataacacatttaactattaatttaatgatttggtgtaccaatacact-atatctttgagtgtaccatagaatttgcc 6438580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12547452 - 12547364
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||||||||||||||  ||||| | |||| ||||||||||| || |||| |||||||||||||||||||    
T  12547452 tctcttcaaaaaataacacatttaactattaatttaatgatttggtgtatcaatacactcatatctttgggtgtaccatagaatttgcc 12547364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36489446 - 36489360
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    |||||||||||||||| |||||||||||||||||| ||||||   ||||||||||||||||||| |||| |||||| ||||||||||    
T  36489446 tctcttcaaaaaataatacatttaactattaatttattgatttagtgtaccaatacactcaaatctttgggtgtacaatagaatttg 36489360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 59002 - 58918
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| |||||||||||||||||   |||| |||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  59002 caaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaattattgggtgtaccatagattttgcctt 58918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 11813521 - 11813600
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    |||||||||||||||||||||||||||||   |||| | |||||||||||||||||||| ||| ||||||||||||||||    
T  11813521 caaaaaataacacatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 11813600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7467215 - 7467120
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaa-------tacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||| |||||||||||||||| |||||| | ||||||||       |||||||||||||||| |||||||||||||||||||    
T  7467215 tctcttcaaaaaataacagatttaactattaatttattgatttggtgtaccaaataccaatacactcaaatttttgggtgtaccatagaatttgcc 7467120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 34438511 - 34438592
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||||||| |||||| | ||| |||||||||||||||| |||  ||||||||| ||||||||    
T  34438511 aaaaaataacacatttaactattaatttattgatttggtgttccaatacactcaaattattggatgtaccataaaatttgcc 34438592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 6884241 - 6884161
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| |||||||||||||||||    
T  6884241 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttg 6884161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5420315 - 5420237
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccat 79  Q
    ||||||||||||||| |||||||||||||||||||  ||||| | ||||||||||||||||||| |||  |||||||||    
T  5420315 tctcttcaaaaaatagcacatttaactattaatttaatgatttggtgtaccaatacactcaaatctttaggtgtaccat 5420237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 34665653 - 34665573
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| || ||||||||||||||    
T  34665653 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtataccatagaatttg 34665573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 4673926 - 4674009
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| |||  |||||||||||||||||||    
T  4673926 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccatagaatttgcct 4674009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 11227709 - 11227622
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttt 94  Q
    |||||||||||  ||||||||||||||||   |||| | |||||||||||||||||||| |||  |||||||||||||||||| ||||    
T  11227709 caaaaaataacttatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgccatttt 11227622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 14533146 - 14533229
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||| | ||||| ||| ||||||||||||||||||||    
T  14533146 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacatttaaattgttgggtgtaccatagaatttgcct 14533229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 38963389 - 38963472
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||| |||||||||||||||||   |||| |||||||||||||| ||||||| |||  ||||||||| ||||||||||    
T  38963389 aaaaaataacccatttaactattaatttaaggatttgatgtaccaatacattcaaattgttggatgtaccatacaatttgcctt 38963472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 40370553 - 40370494
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactc 60  Q
    ||||||||||||||||||||||||||||||||||| |||||| | | |||||||||||||    
T  40370553 tctcttcaaaaaataacacatttaactattaatttattgatttggtttaccaatacactc 40370494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 5092079 - 5091997
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||   ||||||||||||||||||    
T  5092079 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttagatgtaccatagaatttgcc 5091997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19636416 - 19636478
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaa 63  Q
    |||||||||||||||||| |||||||||||||||| |||||  | ||||||||||||||||||    
T  19636416 tctcttcaaaaaataacatatttaactattaatttattgatctggtgtaccaatacactcaaa 19636478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19835009 - 19835071
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaa 63  Q
    |||||||||||||||||| |||||||||||||||| |||||  | ||||||||||||||||||    
T  19835009 tctcttcaaaaaataacatatttaactattaatttattgatctggtgtaccaatacactcaaa 19835071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 42427895 - 42427983
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttta 95  Q
    |||||||||||  ||||||||||||||||   |||| | |||||||||||||| ||||| ||| ||||||||||||| ||||| |||||    
T  42427895 caaaaaataacttatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgccatttta 42427983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 32499217 - 32499150
Alignment:
Q  22 ttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||| |||||| | |||| ||||||||||||||| ||  |||||||||||||||||||    
T  32499217 ttaactattaatttattgatttggtgtatcaatacactcaaattctttggtgtaccatagaatttgcc 32499150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 15362817 - 15362875
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||| ||||| | ||||||  ||||||||||||||||||||||||||||||||||||    
T  15362817 aatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaatttgcc 15362875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 15771634 - 15771716
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||  ||| ||||||||||||  ||||||| |||||||||||||| ||||  ||| |||||| ||||||||||||    
T  15771634 caaaaaataacttattgaactattaatttaatgattgggtgtaccaatacacttaaataattgggtgtactatagaatttgcc 15771716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 41555773 - 41555831
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||| ||||| | |||||| ||||||| |||||||||||||||||||||||||||||    
T  41555773 aatttgatgatttggtgtaccgatacacttaaatttttgagtgtaccatagaatttgcc 41555831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 42046118 - 42046076
Alignment:
Q  46 tgtaccaatacactcaaatttttgagtgtaccatagaatttgc 88  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  42046118 tgtaccaatacactcaaattgttgagtgtaccatagaatttgc 42046076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 30980967 - 30980882
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttg 87  Q
    ||||||||||| ||| |||||||||||||||||   || || ||||||||||||||| |||| | ||| |||||||||||||||||    
T  30980967 tcttcaaaaaacaactcatttaactattaatttaaagagtgaatgtaccaatacactaaaatatattgggtgtaccatagaatttg 30980882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 5389525 - 5389605
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||||| |||||||||||||||||    ||| | ||||||||||||||||||||  ||  ||||||||||||||||    
T  5389525 caaaaaataactcatttaactattaatttaagtatttggtgtaccaatacactcaaattggtggatgtaccatagaatttg 5389605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 1353586 - 1353506
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||| |||||||||||  ||||   |||| | |||||||||||||||| ||| ||| ||||||||||||||||||||    
T  1353586 aaaaaataacccatttaactat--atttaaggatttggtgtaccaatacactcatattattgggtgtaccatagaatttgcct 1353506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 17809400 - 17809435
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||||||||||||||||||||||||    
T  17809400 tacactcaaatttttgagtgtaccatagaatttgcc 17809435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 26003357 - 26003404
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||    
T  26003357 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtat 26003404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 3383511 - 3383593
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||| || |||||||||||||||||   |||| | |||||||||||||||||||  |||  ||||||||| ||||||||    
T  3383511 caaaaaatcactcatttaactattaatttaaggatttggtgtaccaatacactcaaatggttggatgtaccataaaatttgcc 3383593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 713713 - 713758
Alignment:
Q  46 tgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||| ||||||| |||||||||||||||||||||||||| ||||    
T  713713 tgtaccgatacacttaaatttttgagtgtaccatagaatttacctt 713758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 11088251 - 11088210
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgccttttta 95  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  11088251 tacactcaaatatttgggtgtaccatagaatttgccttttta 11088210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 33429218 - 33429130
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    ||||||||||| ||   |||||| |||||||||  || |||| ||||||  |||||||||| | ||||||||||||||||||||||||||    
T  33429218 tcttcaaaaaaaaatcaatttaattattaatttaatgtttgg-tgtaccggtacactcaaaatgttgagtgtaccatagaatttgccttt 33429130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 5160992 - 5160929
Alignment:
Q  281 tctctctctcttattaacctttctgaccttttctatgccatattaatgagctcatttcttgaaac 345  Q
    |||||||||||||||||| ||| | || |||||| ||||||||||| |||||| |||||||||||    
T  5160992 tctctctctcttattaactttt-tcacattttctgtgccatattaaagagctcctttcttgaaac 5160929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 4576337 - 4576384
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||| | | ||||||||||||| ||||||||||||||||||    
T  4576337 atgtgcaaattcgcatatgttaagaaatttaaaatagaaattttgtat 4576384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 89
Target Start/End: Complemental strand, 4786397 - 4786362
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||| |||||||||||||||||||||||||||||    
T  4786397 tacacttaaatttttgagtgtaccatagaatttgcc 4786362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 8065290 - 8065247
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaatttt 141  Q
    ||||||||||||| |||||||||||| || ||||||||||||||    
T  8065290 atgtgcaaatttgcacatgttaagaagtttaaaatagaaatttt 8065247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 37083290 - 37083211
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||| ||||| |||  ||||||||| |||||    
T  37083290 caaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacacttaaattgttggatgtaccatataattt 37083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 38248431 - 38248474
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaatttt 141  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||    
T  38248431 atgtgcaaatttgcacatgttaagaaatttaaaatagtaatttt 38248474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 45157617 - 45157530
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| ||| |||||||| ||||||||   || ||| ||||||  ||||||||||| | ||| |||||||||||||||||||    
T  45157617 tcttcaaaaaacaactcatttaaccattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 45157530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 8541695 - 8541733
Alignment:
Q  52 aatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  8541695 aatacactcaaatttttgaatgcaccatagaatttgcct 8541733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 34213961 - 34214003
Alignment:
Q  99 tgtgcaaatttgtacatgttaagaaattgaaaatagaaatttt 141  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||    
T  34213961 tgtgcaaatttgcacatgttaagaaatttaaaatagtaatttt 34214003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 38600159 - 38600217
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||| ||||| | ||||| | |||||| ||||||||||||||| |||||||||||||    
T  38600159 aatttgatgatttggtgtacgagtacacttaaatttttgagtgtatcatagaatttgcc 38600217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 42641222 - 42641260
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  42641222 tacactcaaaattttgggtgtaccatagaatttgccttt 42641260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 4298221 - 4298306
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttg 87  Q
    ||||||||||| ||| ||| |||||||||||||   || ||| ||||||  ||||||||||| | |||||||||||||| ||||||    
T  4298221 tcttcaaaaaacaactcatgtaactattaatttaaagaatgggtgtaccggtacactcaaatatattgagtgtaccataaaatttg 4298306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 12071199 - 12071158
Alignment:
Q  45 atgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||||||||||||| ||| || |||||||||||||    
T  12071199 atgtaccaatacactcaaattgttgggtataccatagaattt 12071158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 17234955 - 17234996
Alignment:
Q  104 aaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||    
T  17234955 aaatttgcacatgttaagaaatttaaaatagtaattttgtat 17234996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 35896735 - 35896820
Alignment:
Q  6 tcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaattt-ttgagtgtaccatagaatttgcct 90  Q
    |||||||| |||  ||||||||||||||||   |  ||| ||||||  ||||||||||| | ||||||||||||||||||||||||    
T  35896735 tcaaaaaacaacttatttaactattaatttaaagtgtgggtgtaccggtacactcaaatatattgagtgtaccatagaatttgcct 35896820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 8770889 - 8770941
Alignment:
Q  90 tttttattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttg 142  Q
    ||||||| ||||||||||||| |||||||||||| || ||| ||| |||||||    
T  8770889 tttttatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttg 8770941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 9220873 - 9220833
Alignment:
Q  48 taccaatacactcaaatttttgagtgtaccatagaatttgc 88  Q
    ||||| ||||||||||| |||| ||||||||||||||||||    
T  9220873 taccagtacactcaaatatttgggtgtaccatagaatttgc 9220833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 24729588 - 24729624
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  24729588 atgtgcaaatttgcacatgttaagaaatttaaaatag 24729624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 25948206 - 25948162
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttg 142  Q
    ||||||||||||| ||||||||||||||| | ||| |||||||||    
T  25948206 atgtgcaaatttgcacatgttaagaaatttataattgaaattttg 25948162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 35310152 - 35310184
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaattt 35  Q
    ||||||||||||||| |||||||||||||||||    
T  35310152 tcttcaaaaaataactcatttaactattaattt 35310184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 37425534 - 37425566
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaattt 35  Q
    ||||||||||||||| |||||||||||||||||    
T  37425534 tcttcaaaaaataactcatttaactattaattt 37425566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2108 - 2022
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2108 tctcttcaaaaaataagacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttg 2022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 27116550 - 27116458
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttt 93  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  27116550 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgggtgtaccataaaattttcctttt 27116458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 28332209 - 28332120
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||    
T  28332209 tctcttcaaaaaataacacatttaactattaatttgttgatttggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 28332120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12362676 - 12362764
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  12362676 tctcttcaaaaaataagacatttaactattaatttattgattgggtgtaccaatacacttaaatttttgagtgtaccatagaatttgcc 12362764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2318744 - 2318831
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  | ||||||| |||||||    
T  2318744 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttggatataccataaaatttgc 2318831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4618030 - 4618120
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||||||||||| |||||||||||||||| |||||| | |||||||||||||||||||||||  |||||||||| ||||||||||    
T  4618030 tctcttcaaaaaataacatatttaactattaatttattgatttggtgtaccaatacactcaaatttttaggtgtaccataaaatttgcctt 4618120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 13795588 - 13795682
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttta 95  Q
    ||||||||||||||||||||||||||||||||||| |||||| | ||||||||| |||||||||||||   ||||||||||||||| || |||||    
T  13795588 tctcttcaaaaaataacacatttaactattaatttattgattaggtgtaccaatgcactcaaattttttgatgtaccatagaatttaccatttta 13795682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21051622 - 21051710
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||||| |||   ||||||||||||||||||    
T  21051622 tctcttcaaaaaataacacatttaactattaatttattgatttggtgtaccaatacattcaaatctttagatgtaccatagaatttgcc 21051710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 34302727 - 34302643
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    |||||||||| |||||||||||||||||   |||| |||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  34302727 aaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaattattgggtgtaccatagaatttgccttt 34302643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 36880874 - 36880806
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttg 69  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||    
T  36880874 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacatttaaatttttg 36880806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13091002 - 13090904
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttattat 99  Q
    |||||||||||||||||||||||||||||||||||  | ||| | |||||||||||||||| || |||| |||||||||||||||| ||| || |||||    
T  13091002 tctcttcaaaaaataacacatttaactattaatttaataatttggtgtaccaatacactcatatctttgggtgtaccatagaatttacctattaattat 13090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 9589295 - 9589202
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttat 96  Q
    |||||||||||||||| ||||||||||||||||  ||||| | ||| |||||||||||| || |||| ||||||||||||||||||||| ||||    
T  9589295 tcttcaaaaaataacatatttaactattaatttaatgatttggtgtgccaatacactcatatctttgggtgtaccatagaatttgccttgttat 9589202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 3425403 - 3425481
Alignment:
Q  9 aaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    |||||||||||||||| |||||||||| || ||| ||||||||||||||| |||| ||||||||||| |||||||||||    
T  3425403 aaaaataacacatttatctattaatttattaatttgatgtaccaatacacccaaaattttgagtgtatcatagaatttg 3425481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 41802194 - 41802100
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttta 95  Q
    |||||||||||||||||| ||||||||||||||||  ||||| | ||||||||||||||| ||  |||| ||||||| || ||||||||||||||    
T  41802194 tctcttcaaaaaataacatatttaactattaatttaatgatttggtgtaccaatacactcgaacctttgggtgtaccgtaaaatttgccttttta 41802100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 6560908 - 6560828
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| |||||||||||||||||    
T  6560908 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaatttg 6560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37431667 - 37431745
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaattt---gttgattggatgtaccaatacactcaaatttttgagtgtac 76  Q
    |||||||||||||||||||||||||||||||||||    |||||| | ||||||||||||||||||| |||||||||||    
T  37431667 tctcttcaaaaaataacacatttaactattaatttataattgatttggtgtaccaatacactcaaatctttgagtgtac 37431745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 21605729 - 21605650
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    |||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| |||||||||||||||||    
T  21605729 aaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttg 21605650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 6114098 - 6114184
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttt 93  Q
    ||||||||||| |||||||||||||||||   |||| | || ||||||||||||||||| |||  ||||||||||||||||||||||    
T  6114098 caaaaaataactcatttaactattaatttaaggatttggtggaccaatacactcaaattgttggatgtaccatagaatttgcctttt 6114184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 43237677 - 43237759
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| ||| |||||||||||||||||||    
T  43237677 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 43237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 1662018 - 1662103
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    ||||||||||| |||||||||||||||||   ||||   |||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  1662018 caaaaaataacccatttaactattaatttaaggattttgtgtaccaatacactcaaattgttgggtgtaccatagaacttgccttt 1662103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14967320 - 14967235
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    |||||| ||||||||||||||||||||| ||||||  |||||   |||||||||||||||| || |||| ||||||||||||||||    
T  14967320 tctctttaaaaaataacacatttaactactaatttaatgatttagtgtaccaatacactcatatctttgggtgtaccatagaattt 14967235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 29743982 - 29743894
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttg-attggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||||||||||||||||| |||||||   | ||| | |||||||||||||| |||||||||| ||||||||| |||||||||    
T  29743982 tcttcaaaaaataacacatttaactcttaattttaaggatttggtgtaccaatacacttaaatttttgaatgtaccatataatttgcct 29743894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 6532661 - 6532578
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||| ||||| ||| ||||||||||||||||||||    
T  6532661 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacacttaaattgttgggtgtaccatagaatttgcct 6532578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 2414007 - 2413925
Alignment:
Q  9 aaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| |||||| |||||||||| |||||||    
T  2414007 aaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattattgagtctaccatagaacttgcctt 2413925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 9534950 - 9534865
Alignment:
Q  9 aaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttttt 94  Q
    ||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| |||||| |||||||||| ||||| ||||    
T  9534950 aaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattattgagtctaccatagaacttgccatttt 9534865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 5204967 - 5205027
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||| ||||| | ||||||  ||||||||||||||||||||||||||||||||||||||    
T  5204967 aatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaatttgcctt 5205027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 40756891 - 40756951
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||| ||||| | ||||||  ||||||||||||||||||||||||||||||||||||||    
T  40756891 aatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaatttgcctt 40756951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 32467125 - 32467046
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||  |||| ||||||||||||  ||||| |||||||||||||||| ||||  |||||||||||||| |||||    
T  32467125 caaaaaataattcattgaactattaatttaatgatttgatgtaccaatacacttaaatgattgagtgtaccatataattt 32467046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 42917199 - 42917117
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||| |||| |||||||||||||||||    ||| | |||||||||||||||||||| ||| ||| |||||||||||||||    
T  42917199 caaaaagtaactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgcaccatagaatttgcc 42917117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 3056467 - 3056386
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgc 88  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||| ||||| ||| ||||||||||||| ||||    
T  3056467 caaaaaataactcatttaactattaatttaaaaatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgc 3056386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 4429454 - 4429417
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4429454 tacactcaaatttttgagtgtaccatagaatttgcctt 4429417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 2141324 - 2141240
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| ||| || ||||||| || |||||||    
T  2141324 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattattgggtctaccataaaacttgcctt 2141240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 13410624 - 13410540
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| |||||||||||||||||    ||| | |||||||||||||||||||| |||  ||||||||| ||||| ||||    
T  13410624 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttggatgtaccataaaatttacctt 13410540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 18228783 - 18228859
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaa 83  Q
    ||||||||||| |||||||||||||||||   |||| | | |||||||||||||||||| ||  |||||||||||||    
T  18228783 caaaaaataactcatttaactattaatttaaggatttggtataccaatacactcaaattgttaggtgtaccatagaa 18228859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 3398387 - 3398340
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||    
T  3398387 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtat 3398340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 23995423 - 23995470
Alignment:
Q  94 tattatgtgcaaatttgtacatgttaagaaattgaaaatagaaatttt 141  Q
    |||||||||||||||||||||||||||||| || ||||||| ||||||    
T  23995423 tattatgtgcaaatttgtacatgttaagaagtttaaaatagtaatttt 23995470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 35162437 - 35162350
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| ||| ||||||| |||||||||   |||| | ||||||| |||||| ||||||||| |||||||||| | |||||||    
T  35162437 tcttcaaaaaaaaactcatttaattattaatttaaagatttggtgtaccagtacacttaaatttttgggtgtaccataaagtttgcct 35162350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 231581 - 231499
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaattt-ttgagtgtaccatagaatttgcc 89  Q
    |||||||||| |||| ||||||||||||  |   ||||||||||| ||||||||| ||| ||||||||||||||||| |||||    
T  231581 aaaaaataactcattaaactattaatttaatatatggatgtaccagtacactcaattttattgagtgtaccatagaaattgcc 231499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 2011379 - 2011468
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttt 93  Q
    ||||||||||| ||   |||||| |||||||||  || |||| ||||||  |||||||||| | |||||||||||||||||||||||||||    
T  2011379 tcttcaaaaaacaatcaatttaattattaatttaatgtttgg-tgtaccggtacactcaaaatgttgagtgtaccatagaatttgcctttt 2011468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 2029435 - 2029353
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||| ||||| ||   |||||||| |||||||||    
T  2029435 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttagatgtaccatggaatttgcc 2029353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 33145223 - 33145264
Alignment:
Q  46 tgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  33145223 tgtaccaatacactcatatttttgggtgtaccatagaatttg 33145264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 24097953 - 24097873
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||||| |||| ||||||||||||  | ||| | ||||||| |||||||||||  ||| || ||||||||||||||    
T  24097953 caaaaaataactcattgaactattaatttaataatttggtgtaccattacactcaaatgattgggtttaccatagaatttg 24097873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 35817668 - 35817744
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccat 79  Q
    ||||||||||||||| |||||||||||||||||     || | |||| |||||||||||||||||||  ||||||||    
T  35817668 tcttcaaaaaataactcatttaactattaatttaaaattttggtgtatcaatacactcaaatttttggatgtaccat 35817744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 5513045 - 5513080
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| ||||||||||||||||||||||||    
T  5513045 tacactcaaatatttgagtgtaccatagaatttgcc 5513080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 23690872 - 23690907
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23690872 tacactcaaattttttagtgtaccatagaatttgcc 23690907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 29996593 - 29996510
Alignment:
Q  6 tcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||| ||| ||||||| |||| ||||   |||| |||||| | ||||||||| |||||||  ||||||||||||||||||    
T  29996593 tcaaaaaacaactcatttaattattgatttaacgatttgatgtaacgatacactcatatttttggatgtaccatagaatttgcc 29996510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 34902025 - 34902064
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctttt 93  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  34902025 tacactcaaatgtttgggtgtaccatagaatttgcctttt 34902064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 5141017 - 5141075
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||| ||||| | ||||||  ||||||||||||||||||||| ||||| ||||||||    
T  5141017 aatttgatgatttggtgtaccggtacactcaaatttttgagtgtgccatataatttgcc 5141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 2021716 - 2021679
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  2021716 tacactcaaatatttgggtgtaccatagaatttgcctt 2021679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 7080156 - 7080119
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  7080156 tacactcaaatatttgaatgtaccatagaatttgcctt 7080119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 31588061 - 31587996
Alignment:
Q  21 tttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||| |||||||||  | ||| | ||||||| |||||||||||||||  ||||||||||||||||    
T  31588061 tttaattattaatttaataatttggtgtaccagtacactcaaatttttaggtgtaccatagaattt 31587996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 40524443 - 40524480
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  40524443 tacactcaaatatttgaatgtaccatagaatttgcctt 40524480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 26265175 - 26265207
Alignment:
Q  193 actactattagttgttttaacatataaaatgtt 225  Q
    |||||||||||||||||||||||||| ||||||    
T  26265175 actactattagttgttttaacatatacaatgtt 26265207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 30839948 - 30839912
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  30839948 atgtgcaaatttgcacatgttaagaaatttaaaatag 30839912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 36597746 - 36597710
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  36597746 atgtgcaaatttgcacatgttaagaaatttaaaatag 36597710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 41350377 - 41350325
Alignment:
Q  90 tttttattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttg 142  Q
    ||||||| ||||||||||||| |||||||||||| || ||| ||| |||||||    
T  41350377 tttttatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttg 41350325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 43393127 - 43393159
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||||||||||||||||||| |||||    
T  43393127 tacactcaaatttttgagtgtaccatataattt 43393159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 7e-34; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 26439841 - 26439930
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaa-tttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  26439841 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatgcactcaaattttttgagtgtaccatagaatttgcc 26439930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 43485361 - 43485447
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| ||||||||    
T  43485361 tcttcaaaaaataacacatttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccataaaatttgcc 43485447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 529355 - 529267
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||||||||||||||||||||||| |||| | | ||||||||||||| ||||||||| ||||||||||||||||||||    
T  529355 tctcttcaaaaaataacacatttaactattaatttattgacttggtgtaccaatacacccaaattttttagtgtaccatagaatttgcc 529267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 278 - 369
Target Start/End: Original strand, 3931499 - 3931590
Alignment:
Q  278 ttttctctctctcttattaacctttctgaccttttctatgccatattaatgagctcatttcttgaaacgggatgccgtatacatgtttattt 369  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||  |||||| ||||||||    
T  3931499 ttttttctctctcttattaacctttctggccttttctatgtcatattaatgagctcatttcttgaaactggatgctatatacaggtttattt 3931590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16323647 - 16323556
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    |||||||||| |||||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  16323647 tctcttcaaataataacacatttaactattaatttattgatttggtgtaccaatacactcaaatctttgggtgtatcatagaatttgccttt 16323556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 37465772 - 37465684
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||| |||||||||||||||| |||||| | |||||||||||||| |||||||||  ||||||||||||||||||    
T  37465772 tctcttcaaaaaataacatatttaactattaatttattgatttggtgtaccaatacacttaaatttttggatgtaccatagaatttgcc 37465684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 13483222 - 13483304
Alignment:
Q  9 aaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||||||||| |||||||||| |||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  13483222 aaaaataacacatttatctattaatttattgatttgatgtcccaatacacccaaaattttgagtgtaccatagaatttgcctt 13483304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 17642162 - 17642072
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||||||||||||||||||||||||||||  ||||| | |||||||||||||||| || ||||  ||||||||||||||||||||    
T  17642162 tctcttcaaaaaataacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttggatgtaccatagaatttgcctt 17642072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2273098 - 2273010
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||| ||||||||||||||||||||||||||||  ||||| | |||||||||||||||| || |||| |||||||||||||||||||    
T  2273098 tctcttaaaaaaataacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 2273010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 4475129 - 4475046
Alignment:
Q  5 ttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||| | ||||||||||||||||||||||| | |||||||||||||||||||||||| ||| |||||||||||||||    
T  4475129 ttcaaaaaataatagatttaactattaatttgttgatttggtgtaccaatacactcaaatttttgggtg-accatagaatttgcc 4475046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 39347455 - 39347538
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||   ||||||||| ||||||||||    
T  39347455 aaaaaataacacatttaactattaatttattgatttaatgtaccaatacactcaaattttttgatgtaccataaaatttgcctt 39347538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 19718669 - 19718758
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| ||||||||||||| |||||||||  ||||| | ||||| ||||||||||||||||||  |||||||||||||||||||    
T  19718669 tctcttcaaaatataacacatttaattattaatttaatgatttggtgtactaatacactcaaatttttggatgtaccatagaatttgcct 19718758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 42444536 - 42444625
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||||||| |||||||||||||||||||  ||||| | ||||||||||||||||||| |||   |||||||||||||||||||    
T  42444536 tctcttcaaaaaatagcacatttaactattaatttaatgatttggtgtaccaatacactcaaatctttagatgtaccatagaatttgcct 42444625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 37511170 - 37511078
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttattat 99  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||    
T  37511170 caaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatcgaatttgccttattattat 37511078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43049624 - 43049537
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||||||||||| ||||||||  ||||| | |||||||||||| |||||||||||  ||||||||||||||||||    
T  43049624 tctcttcaaaaaataacacatttaac-attaatttaatgatttggtgtaccaatacattcaaatttttggatgtaccatagaatttgcc 43049537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 6800097 - 6800180
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||| ||||||||||||||||||||   ||||| | ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  6800097 aaaaaaaaacacatttaactattaattcaatgatttggtgtaccaatacactcaaatctttgagtgtaccataaaatttgcctt 6800180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 44934981 - 44934901
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||||| |||||||||||||||||   |||| |||||||||||||| ||||||| ||| |||||||||||||||||    
T  44934981 caaaaaataactcatttaactattaatttaaggatttgatgtaccaatacattcaaattgttgggtgtaccatagaatttg 44934901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 14498627 - 14498710
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| ||||||||||||| ||||||    
T  14498627 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 14498710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 29773527 - 29773444
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||  |||||||||||||||||   |||| | |||||||||||||||||||| ||| ||||||||||||||||||||    
T  29773527 caaaaaataaatcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcct 29773444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 28090274 - 28090192
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||| ||||||||| ||| |||||||||||||||||||    
T  28090274 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatatactcaaattattgggtgtaccatagaatttgcc 28090192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 38502266 - 38502181
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||| ||||| ||| ||||||||||||| ||||||||    
T  38502266 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgccttt 38502181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 23286647 - 23286563
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| |||||||||||||||||   |||| | ||||||||||||| |||||| ||  |||||||||||||||||||||    
T  23286647 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacgcaaattgttaggtgtaccatagaatttgcctt 23286563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 15726214 - 15726297
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||  ||||||||||||||||   |||| | |||||||||||||||||||| |||  |||||||||||||||||||    
T  15726214 caaaaaataacttatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaatttgcct 15726297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 29229501 - 29229586
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    ||||||||||| || ||||||||||||||    ||| | |||||||||||||||||||  ||| ||||||||||||||||||||||    
T  29229501 caaaaaataactcacttaactattaatttaagaatttggtgtaccaatacactcaaatggttgggtgtaccatagaatttgccttt 29229586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 37161585 - 37161504
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||| |||||||||||||||||   |||| |||||||| ||||||||||||| ||| ||||| ||||||| |||||    
T  37161585 aaaaaataactcatttaactattaatttaaggatttgatgtacctatacactcaaattgttgggtgtagcatagaacttgcc 37161504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 946058 - 945975
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||  |||  |||||| ||||||||||||    
T  946058 caaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaatggttggatgtaccgtagaatttgcct 945975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 23274703 - 23274620
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||| | |||||||||||||||   |||| | || ||||||||||||||||| | ||||||||| |||||||||||||    
T  23274703 aaaaaataactcctttaactattaatttaaagatttggtgcaccaatacactcaaattgtagagtgtaccgtagaatttgcctt 23274620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 36002438 - 36002355
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   |||| | ||||| |||||||||||||| |||  |||||||||||| ||||||    
T  36002438 caaaaaataactcatttaactattaatttaaggatttggtgtactaatacactcaaattgttggatgtaccatagaacttgcct 36002355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 34332194 - 34332112
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||    ||| | ||||||||| |||| ||||| ||| |||||||||||||||||||    
T  34332194 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatgcacttaaattattgggtgtaccatagaatttgcc 34332112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 1043145 - 1043060
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttg 87  Q
    |||||||||||||||  ||||||||||||||||   || ||| |||||| |||||||||||| | ||| |||||||||||||||||    
T  1043145 tcttcaaaaaataacttatttaactattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccatagaatttg 1043060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 7885935 - 7885874
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    |||||| ||||| ||||||||  |||||||| |||||||| |||||||||||||||||||||    
T  7885935 aatttgatgatttgatgtaccggtacactcagatttttgaatgtaccatagaatttgccttt 7885874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 9580112 - 9580167
Alignment:
Q  90 tttttattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||| ||||||||||||  |||||||||||| || ||||||||||||||||||    
T  9580112 tttttatcatgtgcaaatttacacatgttaagaagtttaaaatagaaattttgtat 9580167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 10280642 - 10280575
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgt 74  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| ||||    
T  10280642 caaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgt 10280575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 16445743 - 16445794
Alignment:
Q  94 tattatgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||||||| |||| ||||||| || ||||||||||||||||||    
T  16445743 tattatgtgcaaatttgcacatattaagaagtttaaaatagaaattttgtat 16445794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 28014869 - 28014916
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||    
T  28014869 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtat 28014916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 32888029 - 32888068
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctttt 93  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  32888029 tacactcaaatatttgagtgtaccatagaatttgcctttt 32888068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 41954 - 41992
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  41954 tacactcaaatatttgagtgtaccatagaatttgccttt 41992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 29604335 - 29604420
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| ||   |||||| |||||||||  || ||| ||||||||||||| ||||| | |||||||||||||||||||||||    
T  29604335 tcttcaaaaaacaatcaatttaattattaatttaatgtttg-atgtaccaatacattcaaaatattgagtgtaccatagaatttgcc 29604420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 39722040 - 39721970
Alignment:
Q  19 catttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||| |||||||||  | ||  |||||||  |||||||||||| ||||||||||||||||||||||||    
T  39722040 catttaaatattaatttaattatctgatgtacggatacactcaaatatttgagtgtaccatagaatttgcc 39721970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 39300411 - 39300496
Alignment:
Q  6 tcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcct 90  Q
    |||||||| ||| |||||||||||||||||   || |||||||| || |||| |||||| | ||| ||||||||||||||||||||    
T  39300411 tcaaaaaacaactcatttaactattaatttaaagagtggatgtagcagtacattcaaatatattgggtgtaccatagaatttgcct 39300496  T

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Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 2749632 - 2749720
Alignment:
Q  9 aaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaattt-ttgagtgtaccatagaatttgcctttttat 96  Q
    ||||| ||| |||||||| ||||||||   || |||||||||   ||||||||||| | ||| ||||||||||||||||||||||||||    
T  2749632 aaaaacaactcatttaaccattaatttaaagagtggatgtacaggtacactcaaatatattgggtgtaccatagaatttgcctttttat 2749720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 9509219 - 9509259
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgccttttt 94  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  9509219 tacactcaaatatttgaatgtaccatagaatttgccttttt 9509259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 12163267 - 12163347
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||||| |||||||||||||||||    ||| ||||||||||| || ||||||  ||| ||| |||||||||||||    
T  12163267 caaaaaataactcatttaactattaatttaagaatttgatgtaccaatgcattcaaatggttgggtgcaccatagaatttg 12163347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 12407695 - 12407775
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||||| |||||||||||||||||    ||| ||||||||||| || ||||||  ||| ||| |||||||||||||    
T  12407695 caaaaaataactcatttaactattaatttaagaatttgatgtaccaatgcattcaaatggttgggtgcaccatagaatttg 12407775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 12801142 - 12801106
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||||| ||||||||||||||||||||    
T  12801142 tacactcaaatttttgggtgtaccatagaatttgcct 12801106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 43921211 - 43921115
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttattat 99  Q
    |||| ||||||||| | |||||||||||| ||   ||||| | ||||||||||||||||||| |||  || ||||||| |||||| ||| |||||||    
T  43921211 tctttaaaaaataatatatttaactattagttcaatgatttggtgtaccaatacactcaaatctttaggtataccataaaatttgtcttattattat 43921115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 2261116 - 2261029
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaattt-ttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||  |||||| |||||||||   || ||| ||||||  ||||||||||| | |||||||||||||||||||||||    
T  2261116 tcttcaaaaaacaacttatttaattattaatttaaagagtgggtgtaccggtacactcaaatatattgagtgtaccatagaatttgcc 2261029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 2880250 - 2880336
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| ||   |||||| |||||||||  || |||| ||||||  |||||||||| | ||||||||||||||||||||||||    
T  2880250 tcttcaaaaaacaatcaatttaattattaatttaatgtttgg-tgtaccggtacactcaaaatgttgagtgtaccatagaatttgcct 2880336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 17096602 - 17096688
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| ||   |||||| |||||||||  || |||| |||||| ||||||||||| | ||| ||||||||||||||||||||    
T  17096602 tcttcaaaaaacaatcaatttaattattaatttaatgtttgg-tgtaccgatacactcaaaatgttgggtgtaccatagaatttgcct 17096688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 24993502 - 24993459
Alignment:
Q  102 gcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||| ||||||||||||||| |||||| |||||||||||    
T  24993502 gcaaatttgcacatgttaagaaatttaaaataaaaattttgtat 24993459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 27874692 - 27874739
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| |||||||||||| || |||||| |||||||||||    
T  27874692 atgtgcaaatttgcacatgttaagaagtttaaaatacaaattttgtat 27874739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 27970047 - 27970008
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctttt 93  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  27970047 tacactcaaattgttgggtgtaccatagaatttgcctttt 27970008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 29454534 - 29454617
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||  ||||||||||||||||   || ||| ||||||  ||||||||||| | ||| ||||||||||||||||||||    
T  29454534 aaaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 29454617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 31893677 - 31893740
Alignment:
Q  27 tattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||| | ||| | ||||||  |||||| ||||||||||||||||| ||||||||||||    
T  31893677 tattaatttgataatttggtgtaccggtacacttaaatttttgagtgtaccgtagaatttgcct 31893740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 36162272 - 36162189
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcct 90  Q
    |||||| |||||||||||||||||||||   || |||||||||   ||||||||||| | ||| |||||| |||||||||||||    
T  36162272 aaaaaacaacacatttaactattaatttaaagagtggatgtactggtacactcaaatatattgggtgtactatagaatttgcct 36162189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 36967081 - 36967128
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| |||||||||||| || |||||||||| |||||||    
T  36967081 atgtgcaaatttgcacatgttaagaagtttaaaatagaaactttgtat 36967128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 38212955 - 38212998
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaatttt 141  Q
    ||||||||||||| |||||||||||| || ||||||||||||||    
T  38212955 atgtgcaaatttgcacatgttaagaagtttaaaatagaaatttt 38212998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 23870631 - 23870669
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  23870631 tacactcaaatatttgagtgtaccataaaatttgccttt 23870669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 40776941 - 40777027
Alignment:
Q  6 tcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcctt 91  Q
    |||||||| |||  ||||||||||||||||    | || |||||| ||||||||||||| ||||| |||||||||||||||| ||||    
T  40776941 tcaaaaaacaacttatttaactattaatttaaaaagtgaatgtacgaatacactcaaatattttgggtgtaccatagaattttcctt 40777027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 41674569 - 41674484
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| ||   |||||| |||||||||  || |||| ||||||  |||||||||| | |||||||||||||||||||||||    
T  41674569 tcttcaaaaaacaatcaatttaattattaatttaatgtttgg-tgtaccggtacactcaaaatgttgagtgtaccatagaatttgcc 41674484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 5215684 - 5215737
Alignment:
Q  46 tgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttattat 99  Q
    |||||| ||||||||||| | |||||||||||||| |||||||| | |||||||    
T  5215684 tgtaccgatacactcaaaatattgagtgtaccataaaatttgccatattattat 5215737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 6631225 - 6631314
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| |||  ||||||||||||||||   || ||| | ||||  ||||||||||| | ||| |||||||||||||||||||||    
T  6631225 tcttcaaaaaacaactaatttaactattaatttaaagaatgggtataccggtacactcaaatatattgggtgtaccatagaatttgcctt 6631314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 417714 - 417678
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||| | ||||||||||||||||||||||||    
T  417714 tacactcaaaatattgagtgtaccatagaatttgcct 417678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 2161554 - 2161518
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  2161554 atgtgcaaatttgcacatgttaagaaatttaaaatag 2161518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 3306066 - 3306102
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  3306066 atgtgcaaatttgcacatgttaagaaatttaaaatag 3306102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 4214815 - 4214903
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||||||   ||||||||||||||||   || ||| | ||||  ||||||||||| | ||| ||||||||||||||||||||    
T  4214815 tcttcaaaaaataatttatttaactattaatttaaagagtgggtataccggtacactcaaatatattgggtgtaccatagaatttgcct 4214903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 6818184 - 6818148
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    |||||||||||||||||||||||||| || |||||||    
T  6818184 atgtgcaaatttgtacatgttaagaagtttaaaatag 6818148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 28897266 - 28897310
Alignment:
Q  46 tgtaccaatacactcaaattt-ttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||    
T  28897266 tgtaccaatacacccaaatttattgggtgtaccatagaatttgcc 28897310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 38047941 - 38047977
Alignment:
Q  90 tttttattatgtgcaaatttgtacatgttaagaaatt 126  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  38047941 tttttattatgtgcaaatttgcacatgttaagtaatt 38047977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29333 - 29255
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  29333 tctcttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgggtgtaccat 29255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6581 - 6669
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||||| |||||||||||||||| |||||| | |||||||||||||||||||||||  |||||||||||||||||||    
T  6581 tctcttcaaaaaataacatatttaactattaatttattgatttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcc 6669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11446824 - 11446736
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||| || |||| |||||||||||||||||||    
T  11446824 tctcttcaaaaaataacacatttaactattaatttattgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 11446736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 34196127 - 34196216
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||| ||||||||||| |||||||||||||||| |||||| |||  | |||||||||||||||||||||||||||||| |||||||||    
T  34196127 tctcttaaaaaaataacatatttaactattaatttattgatttgattaatcaatacactcaaatttttgagtgtaccataaaatttgcct 34196216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 6265252 - 6265341
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||||||||||| |||||||||||| |||||| |  ||| ||||||||||||||||||   |||||||||||||||||||    
T  6265252 tctcttcaaaaaataacacattaaactattaatttattgatttggggtatcaatacactcaaatttttagatgtaccatagaatttgcct 6265341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30020676 - 30020761
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    ||||||||||||||||||||||||||||||||||| |||||| | | || ||||||||||||| |||||  |||||||||||||||    
T  30020676 tctcttcaaaaaataacacatttaactattaatttattgatttggtatatcaatacactcaaacttttggatgtaccatagaattt 30020761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 15383522 - 15383611
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||||||||||||||| ||||||||| ||||||  ||||| | | ||||||||||||||||||||||  ||||||||| |||||||||    
T  15383522 tctcttcaaaaaataacatatttaactaataatttactgatttggtataccaatacactcaaatttttggatgtaccatataatttgcct 15383611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 32834098 - 32834181
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||| ||||||||||||  ||||| | |||||||||||||||||||| ||  ||||||||||||||||||||    
T  32834098 caaaaaataactcattgaactattaatttaatgatttggtgtaccaatacactcaaattattaggtgtaccatagaatttgcct 32834181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 2258985 - 2258905
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||||||| |||||||||||||||||   ||||   |||||||||||||||||||| ||| |||||||||||||||||    
T  2258985 caaaaaataactcatttaactattaatttaaggatttagtgtaccaatacactcaaattgttgggtgtaccatagaatttg 2258905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 13390467 - 13390383
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| |||||||||||||||||   |||| | |||||||||||||| ||||| ||| ||||||||||||| |||||||    
T  13390467 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccatagaacttgcctt 13390383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17010449 - 17010361
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||||||||||||||||||||||| |||| | | ||||| ||||||  ||||  ||| |||||| |||||||||||||    
T  17010449 tctcttcaaaaaataacacatttaactattaatttattgaattggtgtactaatacatccaaaaattttagtgtagcatagaatttgcc 17010361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 21181197 - 21181137
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||| ||||| | |||||| |||||||||||||||||||||||||||||||||||||||    
T  21181197 aatttgatgatttggtgtaccgatacactcaaatttttgagtgtaccatagaatttgcctt 21181137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 1705664 - 1705605
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    |||||| ||||| | |||||| ||||||||||||||||||||||||||||||||||||||    
T  1705664 aatttgatgatttggtgtaccgatacactcaaatttttgagtgtaccatagaatttgcct 1705605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8376342 - 8376429
Alignment:
Q  1 tctcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgc 88  Q
    |||||||||||||||||||||||||||| |||||| |||| | | |||||||||||| |||||||| |   ||||||||| |||||||    
T  8376342 tctcttcaaaaaataacacatttaactaataatttattgacttggtgtaccaatacattcaaatttgtagatgtaccataaaatttgc 8376429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 26358877 - 26358960
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   | || | |||||||||||||||||||| ||| ||||||||||||| ||||||    
T  26358877 caaaaaataactcatttaactattaatttaagggtttggtgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 26358960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 17545687 - 17545607
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    |||||||||||  ||||||||||||||||    ||| | |||||||||||||||||||| ||| |||||||||||||||||    
T  17545687 caaaaaataacttatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttg 17545607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 24487612 - 24487683
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccat 79  Q
    |||||||||| |||||||||||||||||   |||| | |||||||||||||||||||| ||| |||||||||    
T  24487612 aaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccat 24487683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 6848592 - 6848510
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||| |||||||||||||||||   ||||   | ||||||| |||||||||| ||| |||||||||||||||||||    
T  6848592 caaaaaataactcatttaactattaatttaaggattttgtataccaatgcactcaaattgttgggtgtaccatagaatttgcc 6848510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 24248862 - 24248804
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||| ||||| | ||||||  ||||||||||||||||||||||||||||||||||||    
T  24248862 aatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaatttgcc 24248804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 9661839 - 9661742
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcctttttattat 99  Q
    ||||||||||| ||| |||||||||||||||||   || ||| ||||||  ||||||||||| | ||| ||||||||||||||||||| || ||||||    
T  9661839 tcttcaaaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgccattatattat 9661742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 24212994 - 24212909
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgccttt 92  Q
    |||||||| || |||||||||||||||||   ||||   |||||||||||||||||||  |||  |||||||||||||||||||||    
T  24212994 caaaaaatcactcatttaactattaatttaaggatttagtgtaccaatacactcaaatggttggatgtaccatagaatttgccttt 24212909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 1096303 - 1096211
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttattat 99  Q
    ||||||||||| |||||||||||||||||   ||||   |||||||||||| | ||| | ||| ||||||||||||| ||||||| |||||||    
T  1096303 caaaaaataactcatttaactattaatttaaagatttagtgtaccaatacaataaaaatattgggtgtaccatagaacttgccttattattat 1096211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 8401740 - 8401824
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||| |||||||||||||||||   |||| | ||||| |||||||||||||  |||  ||||||||| ||||||||||    
T  8401740 caaaaaataactcatttaactattaatttaaagatttggtgtacgaatacactcaaatggttggatgtaccatataatttgcctt 8401824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 24159816 - 24159876
Alignment:
Q  27 tattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    ||||||| || ||||| | ||||||| ||||||||||||||| ||||||||||||||||||    
T  24159816 tattaatgtgatgatttggtgtaccagtacactcaaattttttagtgtaccatagaatttg 24159876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 8549874 - 8549961
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||| |||||||| ||||||||   || ||  |||||| |||||||||||| | ||| |||||||||||||||||||    
T  8549874 tcttcaaaaaataactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 8549961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 34692521 - 34692474
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaattttgtat 145  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||    
T  34692521 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtat 34692474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 1339436 - 1339374
Alignment:
Q  27 tattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    |||||||||| ||||| | |||| |  ||||||||||||||| ||||||||||||||||||||    
T  1339436 tattaatttgatgatttggtgtatcggtacactcaaatttttaagtgtaccatagaatttgcc 1339374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 4901275 - 4901365
Alignment:
Q  9 aaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttattat 99  Q
    ||||||||  |||||||||||||||||   ||||  ||||||||||||||||||||| ||   ||||||||| |||||| ||| |||||||    
T  4901275 aaaaataattcatttaactattaatttaaggatttaatgtaccaatacactcaaattgttagatgtaccataaaatttgtcttgttattat 4901365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 32871924 - 32871887
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    |||||||||| |||||||||||||||||||||||||||    
T  32871924 tacactcaaacttttgagtgtaccatagaatttgcctt 32871887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 1371443 - 1371399
Alignment:
Q  55 acactcaaatttttgagtgtaccatagaatttgcctttttattat 99  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||    
T  1371443 acactcaaatttttgagtgtgccatagaatttgtcttattattat 1371399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 1379191 - 1379147
Alignment:
Q  55 acactcaaatttttgagtgtaccatagaatttgcctttttattat 99  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||    
T  1379191 acactcaaatttttgagtgtgccatagaatttgtcttattattat 1379147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 2994673 - 2994729
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    |||||| ||||| | |||||| ||||||||||| ||| |||||||||||||||||||    
T  2994673 aatttgatgatttggtgtaccgatacactcaaaatttggagtgtaccatagaatttg 2994729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 14506974 - 14506918
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttg 87  Q
    |||||| ||||| | ||||||  ||||||||||||||| ||||||||||||||||||    
T  14506974 aatttgatgatttggtgtaccggtacactcaaatttttcagtgtaccatagaatttg 14506918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 4110633 - 4110550
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   ||||   |||||||||| | | ||||| ||| ||||||||||||| ||||||    
T  4110633 caaaaaataactcatttaactattaatttaaggatttagtgtaccaatatatttaaattattgggtgtaccatagaacttgcct 4110550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 4509517 - 4509430
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcc 89  Q
    |||||||||||||||  ||||||||||||||||   || ||| ||||||  ||||||||||| | ||  |||||||||||||||||||    
T  4509517 tcttcaaaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattaggtgtaccatagaatttgcc 4509430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 89
Target Start/End: Complemental strand, 10965754 - 10965719
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcc 89  Q
    ||||||||||||||| ||||||||||||||||||||    
T  10965754 tacactcaaatttttaagtgtaccatagaatttgcc 10965719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 19473729 - 19473674
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    |||||| ||||| | ||||||  |||||||||||||||||||||||| ||||||||    
T  19473729 aatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccctagaattt 19473674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 9686813 - 9686771
Alignment:
Q  53 atacactcaaattt-ttgagtgtaccatagaatttgccttttt 94  Q
    |||||||||||| | ||||||||||||||||||||||||||||    
T  9686813 atacactcaaatatattgagtgtaccatagaatttgccttttt 9686771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 17552598 - 17552639
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatagaaatt 139  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||    
T  17552598 atgtgcaaatttgcacatgttaagaaatttaaaatagtaatt 17552639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 14228137 - 14228173
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  14228137 atgtgcaaatttgcacatgttaagaaatttaaaatag 14228173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 28943780 - 28943816
Alignment:
Q  98 atgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  28943780 atgtgcaaatttgcacatgttaagaaatttaaaatag 28943816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 33017895 - 33017855
Alignment:
Q  94 tattatgtgcaaatttgtacatgttaagaaattgaaaatag 134  Q
    ||||||||||||||||| ||||||||| ||||| |||||||    
T  33017895 tattatgtgcaaatttgcacatgttaaaaaatttaaaatag 33017855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 36933 - 37016
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcct 90  Q
    ||||||||||| |||||||||||||||||   |||| | |||| ||||||||||||||| ||||||||||||||||||||||||    
T  36933 caaaaaataactcatttaactattaatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaatttgcct 37016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 48 - 91
Target Start/End: Complemental strand, 404726 - 404683
Alignment:
Q  48 taccaatacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  404726 taccaatacactcaaatttttgagtgtaccatagaatttgcctt 404683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 214226 - 214141
Alignment:
Q  3 tcttcaaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgc 88  Q
    ||||| ||||||||| | ||| | ||| |||||| |||||   ||||||| |||||||||||||||||||||||||||||||||||    
T  214226 tcttcgaaaaataactcgtttcaatatgaatttgatgattttgtgtaccagtacactcaaatttttgagtgtaccatagaatttgc 214141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 191318 - 191360
Alignment:
Q  90 tttttattatgtgcaaatttgtacatgttaagaaattgaaaat 132  Q
    ||||||||||||||||||||| ||||||||||||||| |||||    
T  191318 tttttattatgtgcaaatttgcacatgttaagaaatttaaaat 191360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1844 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1844
Description:

Target: scaffold1844; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 1174 - 1106
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaatttgcctttttattat 99  Q
    |||||| ||||| | ||||||  ||||||||||||||| |||||||||||||||||||||| |||||||    
T  1174 aatttgatgatttggtgtaccggtacactcaaatttttaagtgtaccatagaatttgccttgttattat 1106  T

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Target: scaffold0072 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 47946 - 47983
Alignment:
Q  54 tacactcaaatttttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  47946 tacactcaaatttttaagtgtaccatagaatttgcctt 47983  T

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Target: scaffold0131 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 10727 - 10672
Alignment:
Q  31 aatttgttgattggatgtaccaatacactcaaatttttgagtgtaccatagaattt 86  Q
    |||||| ||||| | ||||||  ||||||||||||||| |||||||||||||||||    
T  10727 aatttgatgatttggtgtaccggtacactcaaattttttagtgtaccatagaattt 10672  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 45843 - 45760
Alignment:
Q  8 aaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcct 90  Q
    |||||| ||| || ||||||||||||||   |||| |||||| | |||||||||||| |||||  |||||||||||||||||||    
T  45843 aaaaaacaactcacttaactattaatttaaagatttgatgtatcgatacactcaaatattttggatgtaccatagaatttgcct 45760  T

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Target: scaffold0493 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 1425 - 1379
Alignment:
Q  46 tgtaccaatacactcaaattt-ttgagtgtaccatagaatttgcctt 91  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  1425 tgtaccaatacacccaaatttattgggtgtaccatagaatttgcctt 1379  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 48092 - 48034
Alignment:
Q  7 caaaaaataacacatttaactattaatttgttgattggatgtaccaatacactcaaatt 65  Q
    ||||||||||  |||||||||||||||||   |||| | ||||||||||||||||||||    
T  48092 caaaaaataaatcatttaactattaatttaaggatttggtgtaccaatacactcaaatt 48034  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 166780 - 166833
Alignment:
Q  46 tgtaccaatacactcaaattt-ttgagtgtaccatagaatttgcctttttatta 98  Q
    |||||| |||||| ||||||| |||| |||||||||||||||||||||| ||||    
T  166780 tgtaccgatacacccaaatttattgaatgtaccatagaatttgccttttaatta 166833  T

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