View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14813_low_25 (Length: 246)

Name: NF14813_low_25
Description: NF14813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14813_low_25
NF14813_low_25
[»] chr6 (20 HSPs)
chr6 (1-223)||(9888759-9888981)
chr6 (77-148)||(12766941-12767012)
chr6 (77-148)||(21802613-21802684)
chr6 (153-219)||(9910167-9910233)
chr6 (77-147)||(14224500-14224570)
chr6 (102-148)||(31881860-31881906)
chr6 (100-148)||(34794531-34794579)
chr6 (77-148)||(187764-187835)
chr6 (77-148)||(14313858-14313929)
chr6 (77-148)||(25527724-25527795)
chr6 (77-148)||(34250717-34250788)
chr6 (102-148)||(4125896-4125942)
chr6 (102-148)||(7448248-7448294)
chr6 (102-148)||(12026206-12026252)
chr6 (102-148)||(14306811-14306857)
chr6 (102-148)||(21801958-21802004)
chr6 (106-147)||(17312108-17312149)
chr6 (100-148)||(188442-188490)
chr6 (108-148)||(21847378-21847418)
chr6 (104-148)||(22022283-22022327)
[»] chr1 (32 HSPs)
chr1 (80-148)||(7306956-7307024)
chr1 (98-148)||(8061041-8061091)
chr1 (98-148)||(43504467-43504517)
chr1 (95-148)||(4007565-4007618)
chr1 (77-148)||(11917127-11917198)
chr1 (77-148)||(18407210-18407281)
chr1 (100-147)||(43320587-43320634)
chr1 (77-148)||(45737994-45738065)
chr1 (77-148)||(51362495-51362565)
chr1 (102-148)||(1116453-1116499)
chr1 (98-148)||(38011862-38011912)
chr1 (99-148)||(27521946-27521995)
chr1 (100-148)||(18406547-18406595)
chr1 (104-148)||(27225697-27225741)
chr1 (77-148)||(16536366-16536437)
chr1 (77-148)||(36605409-36605480)
chr1 (77-148)||(41321507-41321578)
chr1 (77-148)||(41322204-41322275)
chr1 (77-148)||(41576020-41576091)
chr1 (77-148)||(42831210-42831281)
chr1 (77-148)||(50144060-50144131)
chr1 (102-148)||(4601712-4601758)
chr1 (102-148)||(19071731-19071777)
chr1 (102-148)||(19119621-19119667)
chr1 (98-148)||(19997619-19997669)
chr1 (102-148)||(25068344-25068390)
chr1 (102-148)||(28044498-28044544)
chr1 (102-148)||(45737324-45737370)
chr1 (102-147)||(27930784-27930829)
chr1 (95-148)||(43319928-43319981)
chr1 (100-148)||(11916468-11916516)
chr1 (104-148)||(27931314-27931358)
[»] chr3 (25 HSPs)
chr3 (99-147)||(33979290-33979338)
chr3 (77-148)||(1263067-1263138)
chr3 (98-148)||(25480545-25480595)
chr3 (102-148)||(27255307-27255353)
chr3 (100-148)||(16067244-16067292)
chr3 (77-148)||(4558029-4558100)
chr3 (77-148)||(4558747-4558818)
chr3 (77-148)||(11056568-11056639)
chr3 (77-152)||(13625909-13625984)
chr3 (77-148)||(18364627-18364698)
chr3 (77-148)||(18365289-18365360)
chr3 (77-148)||(23308933-23309004)
chr3 (77-148)||(33115242-33115313)
chr3 (77-148)||(44500051-44500122)
chr3 (77-148)||(47794660-47794731)
chr3 (77-148)||(48842031-48842101)
chr3 (102-148)||(1262419-1262465)
chr3 (102-148)||(2756615-2756661)
chr3 (102-148)||(11345367-11345413)
chr3 (77-147)||(25259947-25260017)
chr3 (102-148)||(30605354-30605400)
chr3 (102-148)||(32737179-32737225)
chr3 (102-148)||(45241223-45241269)
chr3 (102-148)||(54403581-54403627)
chr3 (95-148)||(54605777-54605830)
[»] chr8 (19 HSPs)
chr8 (77-148)||(32905336-32905407)
chr8 (77-148)||(40791043-40791114)
chr8 (98-148)||(34923860-34923909)
chr8 (102-147)||(37304902-37304947)
chr8 (100-148)||(41312389-41312437)
chr8 (77-148)||(3075303-3075374)
chr8 (77-148)||(14879517-14879588)
chr8 (77-148)||(32904228-32904299)
chr8 (102-148)||(5551575-5551621)
chr8 (102-148)||(6099485-6099531)
chr8 (102-148)||(8442678-8442724)
chr8 (102-148)||(11760076-11760122)
chr8 (102-148)||(14880197-14880243)
chr8 (102-148)||(24778010-24778056)
chr8 (102-148)||(34679933-34679979)
chr8 (95-148)||(11140109-11140162)
chr8 (96-148)||(37266151-37266203)
chr8 (77-145)||(39998367-39998435)
chr8 (104-148)||(44284359-44284403)
[»] chr7 (28 HSPs)
chr7 (77-148)||(32388156-32388227)
chr7 (77-148)||(38669990-38670061)
chr7 (102-148)||(5228647-5228693)
chr7 (77-148)||(19156084-19156155)
chr7 (77-148)||(20755483-20755554)
chr7 (77-148)||(40344445-40344516)
chr7 (98-148)||(10412564-10412614)
chr7 (102-148)||(29615536-29615582)
chr7 (78-148)||(36848506-36848576)
chr7 (77-148)||(2790075-2790146)
chr7 (77-148)||(11639891-11639962)
chr7 (85-148)||(20261590-20261653)
chr7 (77-148)||(29823325-29823396)
chr7 (77-148)||(38790067-38790138)
chr7 (77-148)||(40401560-40401631)
chr7 (77-148)||(42813587-42813658)
chr7 (102-148)||(3341449-3341495)
chr7 (102-148)||(14078376-14078422)
chr7 (102-148)||(14388404-14388450)
chr7 (102-148)||(22711654-22711700)
chr7 (102-148)||(27619642-27619688)
chr7 (98-148)||(36687312-36687362)
chr7 (102-148)||(38987772-38987818)
chr7 (102-148)||(40400922-40400968)
chr7 (102-147)||(8535443-8535488)
chr7 (95-144)||(30738203-30738252)
chr7 (95-148)||(38670692-38670745)
chr7 (95-148)||(42813035-42813088)
[»] chr2 (23 HSPs)
chr2 (77-148)||(11942946-11943017)
chr2 (102-148)||(40947451-40947497)
chr2 (77-148)||(11563791-11563862)
chr2 (98-148)||(1366421-1366471)
chr2 (102-148)||(5475142-5475188)
chr2 (102-148)||(7940002-7940048)
chr2 (77-145)||(12414301-12414369)
chr2 (77-145)||(12426361-12426429)
chr2 (102-148)||(3044947-3044993)
chr2 (102-148)||(7939346-7939392)
chr2 (98-148)||(14335716-14335766)
chr2 (102-148)||(16111175-16111221)
chr2 (102-148)||(37009014-37009060)
chr2 (98-148)||(40020763-40020813)
chr2 (95-148)||(8313668-8313721)
chr2 (95-148)||(13873994-13874047)
chr2 (95-148)||(14014119-14014172)
chr2 (99-148)||(16599541-16599590)
chr2 (95-148)||(32875169-32875222)
chr2 (99-148)||(38910691-38910740)
chr2 (77-121)||(8726721-8726765)
chr2 (100-148)||(10357129-10357177)
chr2 (104-148)||(44332391-44332435)
[»] chr4 (32 HSPs)
chr4 (95-148)||(56310075-56310128)
chr4 (77-148)||(17730189-17730260)
chr4 (77-148)||(46095401-46095472)
chr4 (102-148)||(13482203-13482249)
chr4 (102-148)||(25010066-25010112)
chr4 (77-146)||(37423138-37423207)
chr4 (100-148)||(17722768-17722816)
chr4 (104-148)||(51019673-51019717)
chr4 (77-148)||(615429-615500)
chr4 (77-148)||(12250669-12250740)
chr4 (77-148)||(16192324-16192395)
chr4 (77-148)||(26705678-26705749)
chr4 (77-148)||(33047238-33047309)
chr4 (77-148)||(44665194-44665265)
chr4 (77-148)||(45847776-45847847)
chr4 (77-148)||(47030491-47030562)
chr4 (102-148)||(755535-755581)
chr4 (102-148)||(19313365-19313411)
chr4 (102-148)||(23722060-23722106)
chr4 (102-148)||(30192529-30192575)
chr4 (102-148)||(35667292-35667338)
chr4 (78-148)||(35667390-35667460)
chr4 (102-148)||(35667575-35667621)
chr4 (102-148)||(35667765-35667811)
chr4 (102-148)||(41919917-41919963)
chr4 (102-148)||(54096724-54096770)
chr4 (102-148)||(55068863-55068909)
chr4 (102-148)||(55815006-55815052)
chr4 (102-147)||(6232370-6232415)
chr4 (99-148)||(13772391-13772440)
chr4 (104-148)||(20545027-20545071)
chr4 (104-148)||(29429708-29429752)
[»] scaffold0068 (1 HSPs)
scaffold0068 (77-148)||(59255-59326)
[»] chr5 (23 HSPs)
chr5 (77-148)||(3933987-3934058)
chr5 (77-148)||(19408534-19408605)
chr5 (85-148)||(20570836-20570899)
chr5 (77-148)||(31476973-31477044)
chr5 (77-148)||(36737457-36737528)
chr5 (77-148)||(36742116-36742187)
chr5 (102-152)||(13686626-13686676)
chr5 (102-148)||(32458521-32458567)
chr5 (98-147)||(31601553-31601602)
chr5 (99-147)||(27028650-27028698)
chr5 (77-148)||(8573357-8573428)
chr5 (77-148)||(13685963-13686034)
chr5 (77-148)||(17781054-17781124)
chr5 (77-148)||(27979226-27979297)
chr5 (102-148)||(4055417-4055463)
chr5 (102-148)||(6029474-6029520)
chr5 (102-148)||(9017667-9017713)
chr5 (85-143)||(38498043-38498101)
chr5 (110-148)||(42598996-42599034)
chr5 (102-147)||(1932031-1932076)
chr5 (107-148)||(4877383-4877424)
chr5 (104-148)||(20570150-20570194)
chr5 (104-148)||(31850026-31850070)
[»] scaffold0115 (1 HSPs)
scaffold0115 (102-148)||(31362-31408)
[»] scaffold2113 (1 HSPs)
scaffold2113 (77-148)||(721-792)
[»] scaffold0533 (1 HSPs)
scaffold0533 (77-148)||(9481-9551)
[»] scaffold0368 (1 HSPs)
scaffold0368 (77-148)||(11266-11337)
[»] scaffold0289 (1 HSPs)
scaffold0289 (77-148)||(3403-3474)
[»] scaffold0189 (1 HSPs)
scaffold0189 (102-148)||(11309-11355)
[»] scaffold0361 (1 HSPs)
scaffold0361 (100-148)||(16503-16551)


Alignment Details
Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 9888759 - 9888981
Alignment:
Q  1 ttgctaggttttataaatatactgactccatcccaaatcgtgaggaaataaattccaatcacacttattnnnnnnngagtaaactacattctcttctcct 100  Q
    |||||||||||||||||||||||||||||||||||||  || ||||||||||||| ||||||| |||||       ||||||||||||||||| || | |    
T  9888759 ttgctaggttttataaatatactgactccatcccaaaatgtaaggaaataaattcaaatcacatttattaaaaaaagagtaaactacattctcctccctt 9888858  T
Q  101 taaagatgcttgaattatactctcctccacttttatgttaaaatataccctcgaaggactcatatcgattctaacaccttattcactatttcctagctcg 200  Q
    |||| ||| |||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9888859 taaaaatgtttgaattatactccactccacttttatgttaaaatatactctcgaaggactcatatcgattctaacaccttattcactttttcctagctcg 9888958  T
Q  201 tcgctggtattaatggttcgtag 223  Q
    |||||||||||| | ||||||||    
T  9888959 tcgctggtattagtagttcgtag 9888981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 12766941 - 12767012
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || |||||||||||||||||||| |||| ||||| ||  |||||||||||||||    
T  12766941 gagtaaattacactctcctccccttaaagatgcttgaattacactcccctcccctcctatgttaaaatatac 12767012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 21802684 - 21802613
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| ||  || |||||||||||||||| |||||||||| || ||||||||||||||||    
T  21802684 gagtaaattacactctcctcctctaaaagatgcttgaattacactctcctcccctcttatgttaaaatatac 21802613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 9910167 - 9910233
Alignment:
Q  153 gaaggactcatatcgattctaacaccttattcactatttcctagctcgtcgctggtattaatggttc 219  Q
    |||||||||||||||||||||||| ||||||   ||||||||| ||||||| ||| |||| ||||||    
T  9910167 gaaggactcatatcgattctaacatcttatttgttatttcctaactcgtcgttggcattagtggttc 9910233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 14224570 - 14224500
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatata 147  Q
    ||||||| |||| |||| |  ||| |||||||||||||||| ||||||||| ||| |||||||||||||||    
T  14224570 gagtaaattacactctcattccctcaaagatgcttgaattacactctcctctactcttatgttaaaatata 14224500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 31881860 - 31881906
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||    
T  31881860 aaagatgcttgaattacactcccctccccttttatgttaaaatatac 31881906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 34794579 - 34794531
Alignment:
Q  100 ttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||||| |||| ||||| || ||||||||||||||||    
T  34794579 ttaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 34794531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 187764 - 187835
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| ||||||||| || ||| |||||||||||||||| |||| ||| | || ||| ||||||||||||    
T  187764 gagtaaattacattctcctcccctcaaagatgcttgaattacactcaccttccctcttaagttaaaatatac 187835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 14313929 - 14313858
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  14313929 gagtaaattacactcccatcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 14313858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 25527724 - 25527795
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||||||||| || ||| ||||||||||||    
T  25527724 gagtaaattacactcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatac 25527795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 34250788 - 34250717
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||| |||| || | | |||||||||||||||| ||||| |||| || ||||| ||||||||||    
T  34250788 gagtaaactacactctcctcccttcaaagatgcttgaattacactcttctcccctcttatgctaaaatatac 34250717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 4125896 - 4125942
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||| ||||| |||||||||| || ||||||||||||||||    
T  4125896 aaagatgcttaaattacactctcctcccctcttatgttaaaatatac 4125942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 7448248 - 7448294
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||| | || ||||||||||||||||    
T  7448248 aaagatgcttgaattacactctccttctctcttatgttaaaatatac 7448294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 12026252 - 12026206
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  12026252 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 12026206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 14306811 - 14306857
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| | |||||||| || ||||||||||||||||    
T  14306811 aaagatgcttgaattacattctcctcccctcttatgttaaaatatac 14306857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 21801958 - 21802004
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| |||||| | ||||||||||||||||    
T  21801958 aaagatgcttgaattacactcccctccattcttatgttaaaatatac 21802004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 17312149 - 17312108
Alignment:
Q  106 atgcttgaattatactctcctccacttttatgttaaaatata 147  Q
    |||||||||||| |||| |||||||| |||||||||||||||    
T  17312149 atgcttgaattacactcccctccactcttatgttaaaatata 17312108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 188490 - 188442
Alignment:
Q  100 ttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||||| |||| ||||| || ||| ||||||||||||    
T  188490 ttaaagatgcttgaattacactcccctcccctcttaagttaaaatatac 188442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 21847418 - 21847378
Alignment:
Q  108 gcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||| |||||||||| || ||||||||||||||||    
T  21847418 gcttgaattagactctcctcccctcttatgttaaaatatac 21847378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 22022327 - 22022283
Alignment:
Q  104 agatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||| |||||| ||| || ||||||||||||||||    
T  22022327 agatgcttgaattacactctcatcccctcttatgttaaaatatac 22022283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 7306956 - 7307024
Alignment:
Q  80 taaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||| |||| |||| || ||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  7306956 taaattacactctcctccccttaaagatgcttgaattatactctcatccccttttatgttaaaatatac 7307024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 8061041 - 8061091
Alignment:
Q  98 ccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||||||| |||||||||| || ||||||||||||||||    
T  8061041 ccttaaagatgcttgaattacactctcctcctctcttatgttaaaatatac 8061091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 43504517 - 43504467
Alignment:
Q  98 ccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||||||||    
T  43504517 ccttaaaaatgcttgaattatactctcctcccctcttatgttaaaatatac 43504467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 4007565 - 4007618
Alignment:
Q  95 tctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||||||||||||| ||||| |||||||||| || ||||||||||||||||    
T  4007565 tctccttaaagatgcttaaattacactctcctcccctcttatgttaaaatatac 4007618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 11917198 - 11917127
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || | |||||||||||||||||| ||||||||||  || |||||||||||||||    
T  11917198 gagtaaattacactctcctccctttaaagatgcttgaattacactctcctcctattctatgttaaaatatac 11917127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 18407281 - 18407210
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||||||||||| |||||||| |||||||||| || ||||||||||||||||    
T  18407281 gagtaaattacactcccctccccttaaagatgtttgaattacactctcctcccctcttatgttaaaatatac 18407210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 43320634 - 43320587
Alignment:
Q  100 ttaaagatgcttgaattatactctcctccacttttatgttaaaatata 147  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  43320634 ttaaagatgcttgaattacactcccctccccttttatgttaaaatata 43320587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 45737994 - 45738065
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||||||||| || ||||||||||||||||    
T  45737994 gagtaaattacactcccctcccctcaaagatgcttgaattacactctcctcccctcttatgttaaaatatac 45738065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 51362565 - 51362495
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || |||| ||| |||||||||||||||| ||| |||||| |||||||||||||||||||    
T  51362565 gagtaaattacactcccttc-cctcaaagatgcttgaattacactttcctccccttttatgttaaaatatac 51362495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 1116453 - 1116499
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||    
T  1116453 aaagatgcttgaattacactcccctccccttttatgttaaaatatac 1116499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 38011912 - 38011862
Alignment:
Q  98 ccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||||||| |||| |||||||| ||| ||||||||||||    
T  38011912 ccttaaagatgcttgaattacactcccctccactcttaagttaaaatatac 38011862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 27521995 - 27521946
Alignment:
Q  99 cttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||||||||||||||| |||||||||| || |||| |||||||||||    
T  27521995 cttaaagatgcttgaattacactctcctcccctcttatattaaaatatac 27521946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 18406547 - 18406595
Alignment:
Q  100 ttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||||| |||| ||||| || ||||||||||||||||    
T  18406547 ttaaagatgcttgaattacactcccctcctctcttatgttaaaatatac 18406595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 27225697 - 27225741
Alignment:
Q  104 agatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||| |||||||||| || ||||||||||||||||    
T  27225697 agatgcttgaattacactctcctcccctcttatgttaaaatatac 27225741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 16536366 - 16536437
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  16536366 gagtaaattacactcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 16536437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 36605480 - 36605409
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || ||| ||||||| |||||||| |||| ||||| || ||||||||||||||||    
T  36605480 gagtaaattacactctcctcccctcaaagatgtttgaattacactcccctcccctcttatgttaaaatatac 36605409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 41321507 - 41321578
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||||||||| || ||| ||||||||||||    
T  41321507 gagtaaattacactcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatac 41321578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 41322275 - 41322204
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || ||| |||||||||||||||| |||| ||||| || ||| ||||||||||||    
T  41322275 gagtaaattacactctcctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatac 41322204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 41576091 - 41576020
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| |  ||| |||||||||||||||| | || ||||| |||||||||||||||||||    
T  41576091 gagtaaattacactctcataccctcaaagatgcttgaattacattcccctcctcttttatgttaaaatatac 41576020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 42831281 - 42831210
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || |||||||||| ||||||||| |||| ||||| || ||||||||||||||||    
T  42831281 gagtaaattacactcccctccccttaaagatacttgaattacactcccctccgctcttatgttaaaatatac 42831210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 50144131 - 50144060
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || ||| |||||| ||||||||| |||||| ||| || ||||||||||||||||    
T  50144131 gagtaaattacactctcctcccctcaaagatacttgaattacactctcatcccctcttatgttaaaatatac 50144060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 4601758 - 4601712
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||| | || ||||||||||||||||    
T  4601758 aaagatgcttgaattacactctccttccctcttatgttaaaatatac 4601712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 19071731 - 19071777
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||||||| |||||||||| || ||||||||||||||||    
T  19071731 aaagatgtttgaattacactctcctcccctcttatgttaaaatatac 19071777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 19119621 - 19119667
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||||||| |||||||||| || ||||||||||||||||    
T  19119621 aaagatgtttgaattacactctcctcccctcttatgttaaaatatac 19119667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 19997619 - 19997669
Alignment:
Q  98 ccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||| ||||| | |||||||| || ||||||||||||||||    
T  19997619 ccttaaagatgcttaaattacattctcctcccctcttatgttaaaatatac 19997669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 25068344 - 25068390
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||| || ||| ||||||||||||    
T  25068344 aaagatgcttgaattacactctcctcccctcttaagttaaaatatac 25068390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 28044498 - 28044544
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||||||||||||||||| | ||  |||||||||||||||||||    
T  28044498 aaagatgcttgaattatactcccttcgtcttttatgttaaaatatac 28044544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 45737324 - 45737370
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  45737324 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 45737370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 27930784 - 27930829
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatata 147  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||    
T  27930784 aaagatgcttgaattacactcccctcccctcttatgttaaaatata 27930829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 43319928 - 43319981
Alignment:
Q  95 tctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||| ||||||| |||||||| |||| ||||  |||||||||||||||||||    
T  43319928 tctcctcaaagatgtttgaattacactcccctctccttttatgttaaaatatac 43319981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 11916468 - 11916516
Alignment:
Q  100 ttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||||| |||| |||||  | ||||||||||||||||    
T  11916468 ttaaagatgcttgaattacactcccctcctttattatgttaaaatatac 11916516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 27931358 - 27931314
Alignment:
Q  104 agatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||| |||| ||||| || ||||||||||||||||    
T  27931358 agatgcttgaattacactcccctcccctcttatgttaaaatatac 27931314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 33979338 - 33979290
Alignment:
Q  99 cttaaagatgcttgaattatactctcctccacttttatgttaaaatata 147  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  33979338 cttaaagatgtttgaattatactctcctcctcttttatgttaaaatata 33979290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 1263138 - 1263067
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| ||||||| | || ||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  1263138 gagtaaattacattcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 1263067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 25480545 - 25480595
Alignment:
Q  98 ccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  25480545 ccttaaagatgcttgaattatactcccctcccatcttatgttaaaatatac 25480595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 27255307 - 27255353
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||| || ||||||||||||||||    
T  27255307 aaagatgcttgaattacactctcctcccctcttatgttaaaatatac 27255353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 16067244 - 16067292
Alignment:
Q  100 ttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||||| |||||||| |||||||||| || ||||||||||||||||    
T  16067244 ttaaagatgtttgaattacactctcctcccctcttatgttaaaatatac 16067292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 4558029 - 4558100
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || |||||||||||||||||||| |||| ||||| || ||| ||||||||||||    
T  4558029 gagtaaattacactcccctccccttaaagatgcttgaattacactcccctcccctcttaagttaaaatatac 4558100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 4558818 - 4558747
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| ||||||||||||||||||||| ||||| || ||| ||||||||||||    
T  4558818 gagtaaattacactcccctcccctcaaagatgcttgaattatactcccctcccctcttaagttaaaatatac 4558747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 11056639 - 11056568
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || |||||||||||||||||||| |||| ||||| || ||| ||||||||||||    
T  11056639 gagtaaattacactcccctccccttaaagatgcttgaattacactcccctcccctcttaagttaaaatatac 11056568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 13625984 - 13625909
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatataccctc 152  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||| |||||  | ||||||||||||||||||||    
T  13625984 gagtaaattacactcccctcccctcaaagatgcttgaattacactcccctcccatcttatgttaaaatataccctc 13625909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 18364627 - 18364698
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  18364627 gagtaaattacactcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 18364698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 18365360 - 18365289
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  18365360 gagtaaattacactcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 18365289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 23308933 - 23309004
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || |||||||||||||||||||| |||| ||||| || ||| ||||||||||||    
T  23308933 gagtaaattacactcccctccccttaaagatgcttgaattacactcccctcccctcttaagttaaaatatac 23309004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 33115313 - 33115242
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| ||| || |||||||||||||||| |||  ||||| || ||||||||||||||||    
T  33115313 gagtaaattacactctcctcttctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatac 33115242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 44500122 - 44500051
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| |  ||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  44500122 gagtaaattacactctccttccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 44500051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 47794731 - 47794660
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || ||||||||||| |||||||| |||| ||||  || ||||||||||||||||    
T  47794731 gagtaaattacactctcctccccttaaagatgtttgaattacactcccctctcctcttatgttaaaatatac 47794660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 48842101 - 48842031
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||||||||||| |||||||| |||| ||||| |||||||||||||||||||    
T  48842101 gagtaaattacactcccctccccttaaagatgattgaattacactcccctcc-cttttatgttaaaatatac 48842031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 1262419 - 1262465
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  1262419 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 1262465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 2756661 - 2756615
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  2756661 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 2756615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 11345413 - 11345367
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  11345413 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 11345367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 25260017 - 25259947
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatata 147  Q
    ||||||| |||||||   |||||| ||| ||| |||||||| |||| ||||| ||||||||||||||||||    
T  25260017 gagtaaattacattcctctctcctaaaacatgtttgaattacactcccctcctcttttatgttaaaatata 25259947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 30605400 - 30605354
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||||||| |||| |||||||| ||||||||||||||||    
T  30605400 aaagatgtttgaattacactcccctccactcttatgttaaaatatac 30605354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 32737225 - 32737179
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| ||| |||||| |||||| ||||||||||||    
T  32737225 aaagatgcttgaattacactttcctccccttttaagttaaaatatac 32737179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 45241223 - 45241269
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  45241223 aaagatgcttgaattacactcccctcctctcttatgttaaaatatac 45241269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 54403581 - 54403627
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  54403581 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 54403627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 54605777 - 54605830
Alignment:
Q  95 tctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||| || ||||||||||||| |||| ||||| || ||||||||||||||||    
T  54605777 tctcctcaatgatgcttgaattacactcccctcccctcttatgttaaaatatac 54605830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 32905407 - 32905336
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || ||| |||||||||||||||| ||||||||||  ||||||||||||||||||    
T  32905407 gagtaaattacactctcgtcccctcaaagatgcttgaattacactctcctccctttttatgttaaaatatac 32905336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 40791043 - 40791114
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || ||| ||||||| ||||||||||||||||||| || ||||||||||||||||    
T  40791043 gagtaaattacactctcatcccctcaaagatgtttgaattatactctcctcccctcttatgttaaaatatac 40791114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 34923860 - 34923909
Alignment:
Q  98 ccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  34923860 ccttaaagatgcttgaattatactc-cctcctctcttatgttaaaatatac 34923909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 37304947 - 37304902
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatata 147  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||    
T  37304947 aaagatgcttgaattacactctccttctcttttatgttaaaatata 37304902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 41312437 - 41312389
Alignment:
Q  100 ttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||||| |||| ||||| || ||||||||||||||||    
T  41312437 ttaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 41312389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 3075303 - 3075374
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  3075303 gagtaaattacactcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 3075374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 14879517 - 14879588
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| ||||||| |||||||| |||||||||| || ||||||||||||||||    
T  14879517 gagtaaattacactcccctcccctcaaagatgtttgaattacactctcctcccctcttatgttaaaatatac 14879588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 32904299 - 32904228
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || | | |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  32904299 gagtaaattacactctcatcccttcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 32904228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 5551575 - 5551621
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||| || ||||| ||||||||||    
T  5551575 aaagatgcttgaattacactctcctcctctcttatgctaaaatatac 5551621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 6099531 - 6099485
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||  || ||||||||||||||||    
T  6099531 aaagatgcttgaattacactctcctctcctcttatgttaaaatatac 6099485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 8442678 - 8442724
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||    
T  8442678 aaagatgcttgaattacactctcttcccctcttatgttaaaatatac 8442724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 11760122 - 11760076
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| | |||||||| || ||||||||||||||||    
T  11760122 aaagatgcttgaattacattctcctcctctcttatgttaaaatatac 11760076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 14880243 - 14880197
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  14880243 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 14880197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 24778010 - 24778056
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||| ||||||||| |||||||||| || ||||||||||||||||    
T  24778010 aaagatacttgaattacactctcctcccctcttatgttaaaatatac 24778056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 34679979 - 34679933
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||| ||  |||||||||||||||    
T  34679979 aaagatgcttgaattacactctcctcccctcgtatgttaaaatatac 34679933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 11140109 - 11140162
Alignment:
Q  95 tctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||| |||||| ||||||||| |||| ||||| || ||||||||||||||||    
T  11140109 tctcctaaaagatacttgaattacactcccctcccctcttatgttaaaatatac 11140162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 37266203 - 37266151
Alignment:
Q  96 ctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||| |||||| ||| ||||| |||||||||| || ||||||||||||||||    
T  37266203 ctcctcaaagattctttaattacactctcctcccctcttatgttaaaatatac 37266151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 39998367 - 39998435
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaata 145  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||||||||| || ||| |||||||||    
T  39998367 gagtaaattacactcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaata 39998435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 44284403 - 44284359
Alignment:
Q  104 agatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||| |||| ||||| || ||||||||||||||||    
T  44284403 agatgcttgaattacactcccctcccctcttatgttaaaatatac 44284359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 32388227 - 32388156
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| ||||||||| |||||| |||||||||||||||| ||||  |||| || ||||||||||||||||    
T  32388227 gagtaaattacattctcctctcctcaaagatgcttgaattacactccactcccctcttatgttaaaatatac 32388156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 38669990 - 38670061
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | ||||||||||||||||||||||| |||||||||| || ||| ||||||||||||    
T  38669990 gagtaaattacactcccctctccttaaagatgcttgaattacactctcctcccctcttaagttaaaatatac 38670061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 5228693 - 5228647
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||    
T  5228693 aaagatgcttgaattacactctcctccccttttatgttaaaatatac 5228647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 19156155 - 19156084
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||| |||| |||||| ||||||| |||||||| ||||  |||| || ||||||||||||||||    
T  19156155 gagtaaactacactctcctctcctcaaagatgtttgaattacactcatctcccctcttatgttaaaatatac 19156084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 20755554 - 20755483
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||| |||| |||||| ||||||| |||||||| ||||  |||| || ||||||||||||||||    
T  20755554 gagtaaactacactctcctctcctcaaagatgtttgaattacactcatctcccctcttatgttaaaatatac 20755483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 40344516 - 40344445
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || ||||  |||||||||| |||||||| |||||||||| || ||||||||||||||||    
T  40344516 gagtaaattacactcccttcctcttaaagatgtttgaattacactctcctcccctcttatgttaaaatatac 40344445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 10412614 - 10412564
Alignment:
Q  98 ccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||||||||||| |||||||||| || ||||||||||||||||    
T  10412614 ccttaaatatgcttgaattacactctcctcccctcttatgttaaaatatac 10412564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 29615536 - 29615582
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||| || ||||||||||||||||    
T  29615536 aaagatgcttgaattacactctcctcccctcttatgttaaaatatac 29615582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 36848576 - 36848506
Alignment:
Q  78 agtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||| |||| || | ||||||||||||||||||||||| ||||| |||  || ||||||||||||||||    
T  36848576 agtaaattacactcccctctccttaaagatgcttgaattacactcttctctcctcttatgttaaaatatac 36848506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 2790075 - 2790146
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| |||||| ||||||| |||||||| |||| ||||| || ||| ||||||||||||    
T  2790075 gagtaaattacactctcctctcctcaaagatgtttgaattacactcccctcccctcttaagttaaaatatac 2790146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 11639891 - 11639962
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  11639891 gagtaaattacactcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 11639962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 20261653 - 20261590
Alignment:
Q  85 tacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||| |||| || ||| |||||||||||||||| |||||| ||| || ||||||||||||||||    
T  20261653 tacactctcatcccctcaaagatgcttgaattacactctcatcccctcttatgttaaaatatac 20261590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 29823325 - 29823396
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| ||||||| | || ||| ||||||| |||||||| |||||||||| || ||| ||||||||||||    
T  29823325 gagtaaattacattcccctcccctcaaagatgtttgaattacactctcctcccctcttaagttaaaatatac 29823396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 38790067 - 38790138
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  38790067 gagtaaattacaatcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 38790138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 40401631 - 40401560
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || | | |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  40401631 gagtaaattacactctcctcccttcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 40401560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 42813658 - 42813587
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| |  ||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  42813658 gagtaaattacactctcattccctcaaagatgcttgaattacactcccctcctctcttatgttaaaatatac 42813587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 3341495 - 3341449
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||  || ||||||||||||||||    
T  3341495 aaagatgcttgaattacactctcctctcctcttatgttaaaatatac 3341449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 14078376 - 14078422
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||    
T  14078376 aaagatgcttgaattaaactctcttcccctcttatgttaaaatatac 14078422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 14388404 - 14388450
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||    
T  14388404 aaagatgcttgaattaaactctcttcccctcttatgttaaaatatac 14388450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 22711654 - 22711700
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||| ||| |||||||||| || ||||||||||||||||    
T  22711654 aaagatgcttgatttacactctcctcccctcttatgttaaaatatac 22711700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 27619688 - 27619642
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  27619688 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 27619642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 36687312 - 36687362
Alignment:
Q  98 ccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||||||| |||  ||||| || ||||||||||||||||    
T  36687312 ccttaaagatgcttgaattacacttccctcccctcttatgttaaaatatac 36687362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 38987772 - 38987818
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  38987772 aaagatgcttgaattaaactcccctcccctcttatgttaaaatatac 38987818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 40400922 - 40400968
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||    
T  40400922 aaagatgcttgaattacactctcatcccctcttatgttaaaatatac 40400968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 8535488 - 8535443
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatata 147  Q
    ||||||| |||||||| |||| ||||| ||||||||||||||||||    
T  8535488 aaagatgtttgaattacactcccctccccttttatgttaaaatata 8535443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 30738203 - 30738252
Alignment:
Q  95 tctccttaaagatgcttgaattatactctcctccacttttatgttaaaat 144  Q
    |||||| |||||||||||||||| |||||| ||| || ||||||||||||    
T  30738203 tctcctcaaagatgcttgaattacactctcatcctctcttatgttaaaat 30738252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 38670745 - 38670692
Alignment:
Q  95 tctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||| |||||||||||||||| |||| ||||| || ||| ||||||||||||    
T  38670745 tctcctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatac 38670692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 42813035 - 42813088
Alignment:
Q  95 tctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||| |||||||||||||||| ||| |||| | || ||||||||||||||||    
T  42813035 tctcctcaaagatgcttgaattacactttccttccctcttatgttaaaatatac 42813088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 11943017 - 11942946
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| ||||||||| || ||||||||||| |||||||||||||  |||  |||||||||||||||||||    
T  11943017 gagtaaattacattctcctccccttaaagatgtttgaattatactcatctctccttttatgttaaaatatac 11942946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 40947451 - 40947497
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||    
T  40947451 aaagatgcttgaattacactctcctccccttttatgttaaaatatac 40947497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 11563791 - 11563862
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || ||| |||||||||||||||| |||||| ||| || ||||||||||||||||    
T  11563791 gagtaaattacactctcctcccctcaaagatgcttgaattacactctcatcccctcttatgttaaaatatac 11563862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 1366471 - 1366421
Alignment:
Q  98 ccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||||||| |||||||| |||||||||| || ||||||||||||||||    
T  1366471 ccttaaagatgtttgaattacactctcctcctctcttatgttaaaatatac 1366421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 5475188 - 5475142
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||| || ||||||||||||||||    
T  5475188 aaagatgcttgaattacactctcctcccctcttatgttaaaatatac 5475142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 7940048 - 7940002
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||||||| |||||||||| |||||||||||||||||||    
T  7940048 aaagatgtttgaattacactctcctccccttttatgttaaaatatac 7940002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 12414369 - 12414301
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaata 145  Q
    ||||||| ||||||||| || ||| ||||||| |||||||| | |||||||| || |||||||||||||    
T  12414369 gagtaaattacattctcctcccctcaaagatgtttgaattacattctcctcctctcttatgttaaaata 12414301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 12426429 - 12426361
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaata 145  Q
    ||||||| ||||||||| || ||| ||||||| |||||||| | |||||||| || |||||||||||||    
T  12426429 gagtaaattacattctcctcccctcaaagatgtttgaattacattctcctcctctcttatgttaaaata 12426361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 3044947 - 3044993
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||  || ||||||||||||||||    
T  3044947 aaagatgcttgaattacactctcctcacctcttatgttaaaatatac 3044993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 7939346 - 7939392
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||| | || ||||||||||||||||    
T  7939346 aaagatgcttgaattacactctccttccctcttatgttaaaatatac 7939392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 14335766 - 14335716
Alignment:
Q  98 ccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||||||| |||||| | |  ||||||||||||||||||    
T  14335766 ccttaaagatgcttgaattacactctctttctattttatgttaaaatatac 14335716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 16111221 - 16111175
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| |||||||| ||| ||||||||||||    
T  16111221 aaagatgcttgaattacactcccctccactcttaagttaaaatatac 16111175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 37009014 - 37009060
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  37009014 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 37009060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 40020813 - 40020763
Alignment:
Q  98 ccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||||||||||||||||||||  || || || ||||||||||||||||    
T  40020813 ccttaaagatgcttgaattatacttcccacccctcttatgttaaaatatac 40020763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 8313668 - 8313721
Alignment:
Q  95 tctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||| || ||||||||||||| |||| ||||| || ||||||||||||||||    
T  8313668 tctcctcaaggatgcttgaattacactcccctcccctcttatgttaaaatatac 8313721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 13874047 - 13873994
Alignment:
Q  95 tctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||| ||||||||| |||||||| ||||| |||| || ||||||||||||||||    
T  13874047 tctctttaaagatgtttgaattacactcttctcctctcttatgttaaaatatac 13873994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 14014172 - 14014119
Alignment:
Q  95 tctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||| ||||||||| |||||||| ||||| |||| || ||||||||||||||||    
T  14014172 tctctttaaagatgtttgaattacactcttctcctctcttatgttaaaatatac 14014119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 16599541 - 16599590
Alignment:
Q  99 cttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||||||||||||||||||| | ||||  | ||||||||||||||||    
T  16599541 cttaaagatgcttgaattatacttttctcccttcttatgttaaaatatac 16599590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 32875169 - 32875222
Alignment:
Q  95 tctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||| |||||||||||||||| ||||| || | || ||||||||||||||||    
T  32875169 tctcctaaaagatgcttgaattacactcttcttctctcttatgttaaaatatac 32875222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 38910691 - 38910740
Alignment:
Q  99 cttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||| |||||||| |||| ||||| || ||||||||||||||||    
T  38910691 cttaaagatgtttgaattacactcccctcctctcttatgttaaaatatac 38910740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 8726721 - 8726765
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatact 121  Q
    ||||||| |||| || |||||| ||||||||||||||||||||||    
T  8726721 gagtaaattacactcacttctctttaaagatgcttgaattatact 8726765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 10357177 - 10357129
Alignment:
Q  100 ttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||| ||||||||||||| |||| ||||| || ||||||||||||||||    
T  10357177 ttaatgatgcttgaattacactcccctcccctcttatgttaaaatatac 10357129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 44332435 - 44332391
Alignment:
Q  104 agatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||| |||||| ||| || ||||||||||||||||    
T  44332435 agatgcttgaattacactctcatcccctcttatgttaaaatatac 44332391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 56310128 - 56310075
Alignment:
Q  95 tctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||||||||||    
T  56310128 tctcctcaaagatgcttgaattacactctcctcctctcttatgttaaaatatac 56310075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 17730260 - 17730189
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||||||||  |||||||||||||||||||    
T  17730260 gagtaaattacactcccctcccctcaaagatgcttgaattacactctcctctccttttatgttaaaatatac 17730189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 46095401 - 46095472
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| ||||||| | || ||| |||||||||||||||| |||||||||| || ||| ||||||||||||    
T  46095401 gagtaaattacattcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatac 46095472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 13482203 - 13482249
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||| || ||||||||||||||||    
T  13482203 aaagatgcttgaattacactctcctcccctcttatgttaaaatatac 13482249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 25010112 - 25010066
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||| || ||||||||||||||||    
T  25010112 aaagatgcttgaattacactctcctcccctcttatgttaaaatatac 25010066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 37423138 - 37423207
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatat 146  Q
    ||||||| |||| |||| || ||| |||||||||||||||| |||| |||||| | ||||||||||||||    
T  37423138 gagtaaattacactctcctcccctcaaagatgcttgaattacactcccctccattcttatgttaaaatat 37423207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 17722768 - 17722816
Alignment:
Q  100 ttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||||| |||| ||||| || ||||||||||||||||    
T  17722768 ttaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 17722816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 51019673 - 51019717
Alignment:
Q  104 agatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||| |||||||||| || ||||||||||||||||    
T  51019673 agatgcttgaattacactctcctcccctcttatgttaaaatatac 51019717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 615429 - 615500
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || ||| |||||||||||||||| |||| ||| |||| ||| ||||||||||||    
T  615429 gagtaaattacactctcctcccctcaaagatgcttgaattacactccccttcactcttaagttaaaatatac 615500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 12250669 - 12250740
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || |||| ||| |||||||||||||||| |||| ||||| || ||| ||||||||||||    
T  12250669 gagtaaattacactcccttcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatac 12250740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 16192395 - 16192324
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | ||| || |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  16192395 gagtaaattacactcccctctactgaaagatgcttgaattacactcccctcctctcttatgttaaaatatac 16192324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 26705749 - 26705678
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || |||| | | |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  26705749 gagtaaattacactcccttcccttcaaagatgcttgaattacactcccctcctctcttatgttaaaatatac 26705678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 33047309 - 33047238
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| ||||||| | || |||||||| || |||||||| |||| ||||| || ||||||||||||||||    
T  33047309 gagtaaattacattcccctccccttaaagttgtttgaattacactcccctcccctcttatgttaaaatatac 33047238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 44665265 - 44665194
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || ||| |||| |||||||||||  ||| ||||| |||||||||||||||||||    
T  44665265 gagtaaattacactctcctcccctcaaagttgcttgaattacgctcccctccccttttatgttaaaatatac 44665194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 45847847 - 45847776
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| ||||||| | || |||||||||||||||||||| | ||  |||| || ||||||||||||||||    
T  45847847 gagtaaattacattcccctcaccttaaagatgcttgaattacaatcctctcctctcttatgttaaaatatac 45847776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 47030562 - 47030491
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||||||||| || ||| ||||||||||||    
T  47030562 gagtaaattacactcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatac 47030491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 755581 - 755535
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||||||||||||||||| ||||| || |||| |||||||||||    
T  755581 aaagatgcttgaattatactcccctcccctcttatattaaaatatac 755535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 19313365 - 19313411
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||    
T  19313365 aaagatgcttgaattacactctcatcccctcttatgttaaaatatac 19313411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 23722106 - 23722060
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  23722106 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 23722060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 30192529 - 30192575
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||||||| |||||||||| || ||||||||||||||||    
T  30192529 aaagatgtttgaattacactctcctcccctcttatgttaaaatatac 30192575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 35667338 - 35667292
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  35667338 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 35667292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 35667460 - 35667390
Alignment:
Q  78 agtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||| |||| || |||| ||| |||||||||||||||| |||  ||||| || ||||||||||||||||    
T  35667460 agtaaattacactcccttcccctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatac 35667390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 35667621 - 35667575
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| ||| |||||| || ||||||||||||||||    
T  35667621 aaagatgcttgaattacactttcctcccctcttatgttaaaatatac 35667575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 35667811 - 35667765
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  35667811 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 35667765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 41919963 - 41919917
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| ||||| |||| || ||||||||||||||||    
T  41919963 aaagatgcttgaattacactcttctcctctcttatgttaaaatatac 41919917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 54096770 - 54096724
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| ||| |||||||||| |||||||||||||||||||    
T  54096770 aaagatgtttgagttacactctcctccccttttatgttaaaatatac 54096724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 55068863 - 55068909
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  55068863 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 55068909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 55815052 - 55815006
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||| || ||| ||||||||||||    
T  55815052 aaagatgcttgaattacactctcctcctctcttacgttaaaatatac 55815006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 6232370 - 6232415
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatata 147  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||    
T  6232370 aaagatgcttgaattacactcccctcccctcttatgttaaaatata 6232415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 13772440 - 13772391
Alignment:
Q  99 cttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||| |||||||| |||||| ||| || ||||||||||||||||    
T  13772440 cttaaagatgtttgaattacactctcatcctctcttatgttaaaatatac 13772391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 20545071 - 20545027
Alignment:
Q  104 agatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||| |||| ||||| || ||||||||||||||||    
T  20545071 agatgcttgaattacactcccctcccctcttatgttaaaatatac 20545027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 29429752 - 29429708
Alignment:
Q  104 agatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||| |||||||| | || ||||||||||||||||    
T  29429752 agatgcttgaattacactctccttctctcttatgttaaaatatac 29429708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 59255 - 59326
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| ||  || |||||||||||||||| |||||||||| || ||||||||||||||||    
T  59255 gagtaaattacactctcctcctctaaaagatgcttgaattacactctcctcccctcttatgttaaaatatac 59326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 3934058 - 3933987
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| ||||||| ||| |||||||||||||||| |||  ||||| || ||||||||||||||||    
T  3934058 gagtaaattacactctcttcccctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatac 3933987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 19408534 - 19408605
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || ||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  19408534 gagtaaattacactctcctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 19408605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 20570899 - 20570836
Alignment:
Q  85 tacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||| |||| |||||| |||||||||||||| | |||||||||| || ||||||||||||||||    
T  20570899 tacactctcctctcctcaaagatgcttgaatcacactctcctcccctcttatgttaaaatatac 20570836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 31477044 - 31476973
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | |||||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  31477044 gagtaaattacactcccctctcctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 31476973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 36737528 - 36737457
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || |||||||||||||||||||| |||| ||||| || ||||||||||||||||    
T  36737528 gagtaaattacactcccctccccttaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 36737457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 36742116 - 36742187
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| ||||||| | || ||| |||||||||||||||| |||||| ||| || ||||||||||||||||    
T  36742116 gagtaaattacattcccctcccctcaaagatgcttgaattaaactctcatcccctcttatgttaaaatatac 36742187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 13686676 - 13686626
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatataccctc 152  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||||||    
T  13686676 aaagatgcttgaattacactctcatcccctcttatgttaaaatataccctc 13686626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 32458567 - 32458521
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||    
T  32458567 aaagatgcttgaattacactctcctccccttttatattaaaatatac 32458521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 31601602 - 31601553
Alignment:
Q  98 ccttaaagatgcttgaattatactctcctccacttttatgttaaaatata 147  Q
    |||||||||||||||||||| |||| ||||| ||||||| ||||||||||    
T  31601602 ccttaaagatgcttgaattacactcccctccccttttatattaaaatata 31601553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 27028698 - 27028650
Alignment:
Q  99 cttaaagatgcttgaattatactctcctccacttttatgttaaaatata 147  Q
    ||||||||||||||||||| |||| ||||| || |||||||||||||||    
T  27028698 cttaaagatgcttgaattacactcccctcctctcttatgttaaaatata 27028650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 8573428 - 8573357
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| || |||| ||||  || |||||||||||||||| |||||||| | || ||||||||||||||||    
T  8573428 gagtaaattatattcccttcatctcaaagatgcttgaattacactctccttccctcttatgttaaaatatac 8573357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 13685963 - 13686034
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | |||||| |||||| ||||||||| |||||| ||| || ||||||||||||||||    
T  13685963 gagtaaattacactcccctctcctcaaagatccttgaattacactctcatcccctcttatgttaaaatatac 13686034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 17781124 - 17781054
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || ||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  17781124 gagtaaattacactctcctcccctcaaagatgcttgaattacactc-cctcccctcttatgttaaaatatac 17781054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 27979226 - 27979297
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||  |||| || ||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  27979226 gagtaaattaccatctcctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatac 27979297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 4055463 - 4055417
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||||||| || ||| ||||||||||||    
T  4055463 aaagatgcttgaattacactctcctcccctcttaagttaaaatatac 4055417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 6029474 - 6029520
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||    
T  6029474 aaagatgcttgaattacactctcatcctctcttatgttaaaatatac 6029520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 9017667 - 9017713
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  9017667 aaagatgcttgaattacactcccctcccctcttatgttaaaatatac 9017713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 38498101 - 38498043
Alignment:
Q  85 tacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaa 143  Q
    ||||||||| || |||  ||||||||||||||| |||||||||| || |||||||||||    
T  38498101 tacattctcctcccctcgaagatgcttgaattacactctcctcccctcttatgttaaaa 38498043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 148
Target Start/End: Complemental strand, 42599034 - 42598996
Alignment:
Q  110 ttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  42599034 ttgaattacactctcctccactcttatgttaaaatatac 42598996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 1932076 - 1932031
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatata 147  Q
    ||||||| ||||||||||||| ||||| || |||||||||||||||    
T  1932076 aaagatgtttgaattatactcccctcctctcttatgttaaaatata 1932031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 4877424 - 4877383
Alignment:
Q  107 tgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||||||| |||||||||| || ||||||||||||||||    
T  4877424 tgcttgaattacactctcctcccctcttatgttaaaatatac 4877383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 20570150 - 20570194
Alignment:
Q  104 agatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||| |||| ||||| || ||||||||||||||||    
T  20570150 agatgcttgaattacactcccctcctctcttatgttaaaatatac 20570194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 31850026 - 31850070
Alignment:
Q  104 agatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||| |||||| ||| || ||||||||||||||||    
T  31850026 agatgcttgaattacactctcatcctctcttatgttaaaatatac 31850070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 31408 - 31362
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| ||| |||||| |||||||||||||||||||    
T  31408 aaagatgcttgaattacactttcctccccttttatgttaaaatatac 31362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 721 - 792
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| |||| |||||||| ||| ||||||||||||    
T  721 gagtaaattacactcccatcccctcaaagatgcttgaattacactcccctccactcttaagttaaaatatac 792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 9481 - 9551
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| |||| || ||| ||||||||||||||||||||| |||||  || |||||||||||||||    
T  9481 gagtaaattacactctcctcccctcaaagatgcttgaattatactc-cctccctttctatgttaaaatatac 9551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 11337 - 11266
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || |||||||||| ||||||||| |||| ||||| || ||||||||||||||||    
T  11337 gagtaaattacactcccctccccttaaagatacttgaattacactcccctccgctcttatgttaaaatatac 11266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 3403 - 3474
Alignment:
Q  77 gagtaaactacattctcttctccttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    ||||||| |||| || | || ||| |||||||||||||||| || ||||||| || ||||||||||||||||    
T  3403 gagtaaattacactcccctcccctcaaagatgcttgaattacacactcctcccctcttatgttaaaatatac 3474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 11309 - 11355
Alignment:
Q  102 aaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||| ||| |||||| || ||||||||||||||||    
T  11309 aaagatgcttgaattacactttcctcccctcttatgttaaaatatac 11355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 16503 - 16551
Alignment:
Q  100 ttaaagatgcttgaattatactctcctccacttttatgttaaaatatac 148  Q
    |||||||||||||||||| |||| |||||  | ||||||||||||||||    
T  16503 ttaaagatgcttgaattacactcccctcccatcttatgttaaaatatac 16551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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