View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14814_low_7 (Length: 274)

Name: NF14814_low_7
Description: NF14814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14814_low_7
NF14814_low_7
[»] chr2 (5 HSPs)
chr2 (25-253)||(21871805-21872033)
chr2 (145-242)||(30999279-30999368)
chr2 (114-147)||(35708426-35708459)
chr2 (115-147)||(24188670-24188702)
chr2 (114-150)||(41256791-41256827)
[»] chr7 (6 HSPs)
chr7 (147-253)||(21472271-21472377)
chr7 (145-209)||(18468238-18468302)
chr7 (145-253)||(7493769-7493877)
chr7 (145-253)||(7815798-7815906)
chr7 (114-147)||(21472441-21472474)
chr7 (114-150)||(2629946-2629982)
[»] chr3 (4 HSPs)
chr3 (24-100)||(2624178-2624254)
chr3 (115-150)||(8401825-8401860)
chr3 (115-147)||(14280710-14280742)
chr3 (115-147)||(26419412-26419444)
[»] scaffold0103 (1 HSPs)
scaffold0103 (145-253)||(37092-37200)
[»] chr5 (2 HSPs)
chr5 (145-253)||(22230236-22230343)
chr5 (114-150)||(12339456-12339492)
[»] chr4 (6 HSPs)
chr4 (145-249)||(25314758-25314862)
chr4 (145-205)||(51885165-51885225)
chr4 (150-204)||(27303261-27303315)
chr4 (114-150)||(9782520-9782556)
chr4 (149-203)||(10451000-10451054)
chr4 (114-150)||(27303381-27303416)
[»] chr8 (6 HSPs)
chr8 (145-253)||(26853144-26853252)
chr8 (145-210)||(13304933-13304998)
chr8 (145-208)||(22892756-22892820)
chr8 (114-150)||(29046725-29046761)
chr8 (115-150)||(28075150-28075185)
chr8 (115-149)||(24120916-24120950)
[»] scaffold0650 (1 HSPs)
scaffold0650 (147-208)||(5253-5315)
[»] chr6 (3 HSPs)
chr6 (145-254)||(15575435-15575544)
chr6 (114-150)||(9725605-9725641)
chr6 (114-150)||(25939702-25939738)
[»] chr1 (3 HSPs)
chr1 (115-150)||(12810817-12810852)
chr1 (114-150)||(24903226-24903262)
chr1 (145-208)||(26658024-26658088)
[»] scaffold0855 (1 HSPs)
scaffold0855 (114-150)||(2442-2478)
[»] scaffold0847 (1 HSPs)
scaffold0847 (114-150)||(2607-2643)


Alignment Details
Target: chr2 (Bit Score: 177; Significance: 2e-95; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 21872033 - 21871805
Alignment:
Q  25 tttttccactacaatgctataatgaagattatatgttgtgttcttattttgatcttgctaactgcagcttaacttgatataaaaagatcttccaacaaat 124  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||    
T  21872033 ttttttcactacaatgttataatgaagattatatgttgtgttcttattttgatcttgctaactgcagcttaatttggtgtaaaaagatcttccaacaaat 21871934  T
Q  125 aagaaggagttcatcgtggaaccctagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttgccttcgccgtcaaatgatac 224  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |      
T  21871933 aagaaggagttcatcgtgaaaccctagagagaacaaaagaatgatgaatcttgctttggaactctgatgcttgacccttgccttcgccgtcaaatgtttt 21871834  T
Q  225 tgaatgaataaagtagtgtgcaagggtct 253  Q
    |||||||||||| |||| || ||||||||    
T  21871833 tgaatgaataaattagtttgaaagggtct 21871805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 30999368 - 30999279
Alignment:
Q  145 accctagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttgccttcgccgtcaaatgatactgaatgaataaagtagtg 242  Q
    ||||||||||||||||||||| ||| |||||||| ||||||        ||| ||| |||||||| |||||||||| | ||||||||||||| |||||    
T  30999368 accctagagagaacaaaagaaggatcaatcctgccttggaa--------ctttacctttgccttcaccgtcaaatgtttctgaatgaataaaatagtg 30999279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 147
Target Start/End: Complemental strand, 35708459 - 35708426
Alignment:
Q  114 ttccaacaaataagaaggagttcatcgtggaacc 147  Q
    |||||||||||||||| |||||||||||||||||    
T  35708459 ttccaacaaataagaatgagttcatcgtggaacc 35708426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 147
Target Start/End: Complemental strand, 24188702 - 24188670
Alignment:
Q  115 tccaacaaataagaaggagttcatcgtggaacc 147  Q
    ||||||||||||||||||||||||| |||||||    
T  24188702 tccaacaaataagaaggagttcatcatggaacc 24188670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 41256791 - 41256827
Alignment:
Q  114 ttccaacaaataagaaggagttcatcgtggaacccta 150  Q
    |||||||||||||||| | ||||||||||||||||||    
T  41256791 ttccaacaaataagaaagggttcatcgtggaacccta 41256827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 253
Target Start/End: Complemental strand, 21472377 - 21472271
Alignment:
Q  147 cctagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttgccttcgccgtcaaatgatactgaatgaataaagtagtgtgca 246  Q
    ||||||||||||||||||| ||  |||| ||| |||||||||| ||||||||||||||||||| |||||||| | | ||||||||||||| |||||||||    
T  21472377 cctagagagaacaaaagaaggagaaatcatgccttggaactcttatgcttgacccttgccttcaccgtcaaaagtttctgaatgaataaaatagtgtgca 21472278  T
Q  247 agggtct 253  Q
    |||||||    
T  21472277 agggtct 21472271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 18468238 - 18468302
Alignment:
Q  145 accctagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttgccttc 209  Q
    |||||| ||||||||||||||||||||||||||| || ||||||| |||||||| ||||||||||    
T  18468238 accctaaagagaacaaaagaatgatgaatcctgccttagaactcttatgcttgaaccttgccttc 18468302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 7493877 - 7493769
Alignment:
Q  145 accctagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttgccttcgccgtcaaatgatactgaatgaataaagtagtgtg 244  Q
    |||||||||||||||||| |  |||||||| ||| ||| ||| ||||||||| || ||||||||| || | ||||  | ||||||||||||| |||||||    
T  7493877 accctagagagaacaaaatatagatgaatcatgccttgcaacactgatgcttaacacttgccttcaccataaaatctttctgaatgaataaaatagtgtg 7493778  T
Q  245 caagggtct 253  Q
    |||| ||||    
T  7493777 caagagtct 7493769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 7815906 - 7815798
Alignment:
Q  145 accctagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttgccttcgccgtcaaatgatactgaatgaataaagtagtgtg 244  Q
    ||||||||| ||||||||||| |||  ||||||| ||  |||||||||||||||||||||||||| |  | ||| | | || |||||||||| |||||||    
T  7815906 accctagagtgaacaaaagaaggatatatcctgccttaaaactctgatgcttgacccttgccttcactattaaaggtttcttaatgaataaaatagtgtg 7815807  T
Q  245 caagggtct 253  Q
    |||| ||||    
T  7815806 caagtgtct 7815798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 147
Target Start/End: Complemental strand, 21472474 - 21472441
Alignment:
Q  114 ttccaacaaataagaaggagttcatcgtggaacc 147  Q
    |||||||||||||||||| |||||||||||||||    
T  21472474 ttccaacaaataagaaggtgttcatcgtggaacc 21472441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 2629946 - 2629982
Alignment:
Q  114 ttccaacaaataagaaggagttcatcgtggaacccta 150  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  2629946 ttccaacaaataagaaggggttcatcatggaacccta 2629982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 2624178 - 2624254
Alignment:
Q  24 ctttttccactacaatgctataatgaagattatatgttgtgttcttattttgatcttgctaactgcagcttaacttg 100  Q
    |||||| ||||||  |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  2624178 cttttttcactacgttgctataatgaagattatatgcagtgttcttattttgatcttgctaactgcagcttaacttg 2624254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 150
Target Start/End: Original strand, 8401825 - 8401860
Alignment:
Q  115 tccaacaaataagaaggagttcatcgtggaacccta 150  Q
    ||||||||||||||||| ||||||||||||||||||    
T  8401825 tccaacaaataagaaggggttcatcgtggaacccta 8401860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 147
Target Start/End: Original strand, 14280710 - 14280742
Alignment:
Q  115 tccaacaaataagaaggagttcatcgtggaacc 147  Q
    ||||||||||||||||| |||||||||||||||    
T  14280710 tccaacaaataagaaggggttcatcgtggaacc 14280742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 147
Target Start/End: Complemental strand, 26419444 - 26419412
Alignment:
Q  115 tccaacaaataagaaggagttcatcgtggaacc 147  Q
    ||||||||||||||||| |||||||||||||||    
T  26419444 tccaacaaataagaaggggttcatcgtggaacc 26419412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 37092 - 37200
Alignment:
Q  145 accctagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttgccttcgccgtcaaatgatactgaatgaataaagtagtgtg 244  Q
    |||||| |||||||||| ||| |||||||||||| |||| ||||||||||||||||||||||||| |||||||    | || |||||||||| ||| |||    
T  37092 accctatagagaacaaatgaaggatgaatcctgccttggtactctgatgcttgacccttgccttcaccgtcaatcatttctaaatgaataaaatagcgtg 37191  T
Q  245 caagggtct 253  Q
    |||||||||    
T  37192 caagggtct 37200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 22230343 - 22230236
Alignment:
Q  145 accctagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttgccttcgccgtcaaatgatactgaatgaataaagtagtgtg 244  Q
    |||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||||||| |||   ||| |||| | || |||||||||| |||||||    
T  22230343 accctagatagaacaaaagaaggatgaatcatgccttggaactctgatgcttgacccttgcattcattgtc-aatgtttctaaatgaataaaatagtgtg 22230245  T
Q  245 caagggtct 253  Q
    |||||||||    
T  22230244 caagggtct 22230236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 12339456 - 12339492
Alignment:
Q  114 ttccaacaaataagaaggagttcatcgtggaacccta 150  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  12339456 ttccaataaataagaaggggttcatcgtggaacccta 12339492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 25314758 - 25314862
Alignment:
Q  145 accctagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttgccttcgccgtcaaatgatactgaatgaataaagtagtgtg 244  Q
    |||||||| ||||||| | ||||||||||| | | ||||||||||||||||||||||||||||||  ||||||||| | |||| | |||||| |||||||    
T  25314758 accctagacagaacaataaaatgatgaatcttaccttggaactctgatgcttgacccttgccttcatcgtcaaatgtttctgattcaataaaatagtgtg 25314857  T
Q  245 caagg 249  Q
     ||||    
T  25314858 gaagg 25314862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 51885225 - 51885165
Alignment:
Q  145 accctagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttgc 205  Q
    |||||| |||||||||||||| || ||||||||  |||||||| |||||||||||||||||    
T  51885225 accctacagagaacaaaagaaggaagaatcctgtcttggaactttgatgcttgacccttgc 51885165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 27303315 - 27303261
Alignment:
Q  150 agagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttg 204  Q
    ||||||||||||||||||| ||||| ||| |||||| ||||||| ||||||||||    
T  27303315 agagagaacaaaagaatgaagaatcatgccttggaattctgatggttgacccttg 27303261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 9782520 - 9782556
Alignment:
Q  114 ttccaacaaataagaaggagttcatcgtggaacccta 150  Q
    |||||||||||||||||| ||||||||||||||||||    
T  9782520 ttccaacaaataagaaggggttcatcgtggaacccta 9782556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 10451000 - 10451054
Alignment:
Q  149 tagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgaccctt 203  Q
    ||||||||||||||||| || ||||||||| ||| | |||||||| |||||||||    
T  10451000 tagagagaacaaaagaaggaagaatcctgccttgaagctctgatgtttgaccctt 10451054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 27303416 - 27303381
Alignment:
Q  114 ttccaacaaataagaaggagttcatcgtggaacccta 150  Q
    |||||||||||||||||| ||||||||||||||||||    
T  27303416 ttccaacaaataagaagg-gttcatcgtggaacccta 27303381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 26853252 - 26853144
Alignment:
Q  145 accctagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttgccttcgccgtcaaatgatactgaatgaataaagtagtgtg 244  Q
    ||||||||||||||||||||| ||  ||| |||| |||||| |||||| |||||||||||||||| || ||||||  | |  |||||||||| ||||||     
T  26853252 accctagagagaacaaaagaaggagaaattctgccttggaattctgatacttgacccttgccttcaccatcaaatatttcataatgaataaaatagtgtt 26853153  T
Q  245 caagggtct 253  Q
    ||| |||||    
T  26853152 caatggtct 26853144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 13304998 - 13304933
Alignment:
Q  145 accctagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttgccttcg 210  Q
    ||||||||||||||||||||| || ||||||| | ||| |||| ||||||||||||||||| ||||    
T  13304998 accctagagagaacaaaagaaggaagaatcctaccttgaaactttgatgcttgacccttgctttcg 13304933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 22892756 - 22892820
Alignment:
Q  145 accctagagagaacaaaagaatgatgaa-tcctgctttggaactctgatgcttgacccttgcctt 208  Q
    |||||||||||||||| |||| || ||| |||| | ||| |||||||||||||||||||||||||    
T  22892756 accctagagagaacaagagaaggaagaaatccttccttgaaactctgatgcttgacccttgcctt 22892820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 29046725 - 29046761
Alignment:
Q  114 ttccaacaaataagaaggagttcatcgtggaacccta 150  Q
    |||||||||||||||||| ||||||||||||||||||    
T  29046725 ttccaacaaataagaaggggttcatcgtggaacccta 29046761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 150
Target Start/End: Complemental strand, 28075185 - 28075150
Alignment:
Q  115 tccaacaaataagaaggagttcatcgtggaacccta 150  Q
    ||||| ||||||||||||||||||||||||||||||    
T  28075185 tccaataaataagaaggagttcatcgtggaacccta 28075150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Complemental strand, 24120950 - 24120916
Alignment:
Q  115 tccaacaaataagaaggagttcatcgtggaaccct 149  Q
    ||||||||||||||||||||||||| |||||||||    
T  24120950 tccaacaaataagaaggagttcatcttggaaccct 24120916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 5253 - 5315
Alignment:
Q  147 cctagagagaacaaaagaatgatgaa-tcctgctttggaactctgatgcttgacccttgcctt 208  Q
    |||||||||||||| ||||||| ||| |||||| ||| | |||||||||||||||||||||||    
T  5253 cctagagagaacaagagaatgaagaaatcctgccttgaagctctgatgcttgacccttgcctt 5315  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 15575544 - 15575435
Alignment:
Q  145 accctagagagaacaaaagaatgatgaatcctgctttggaactctgatgcttgacccttgccttcgccgtcaaatgatactgaatgaataaagtagtgtg 244  Q
    |||| |||||||||||||||  ||  |||||||| || ||||| |||||||||||  || ||||| ||||||||   | ||||||| ||||| |||| ||    
T  15575544 acccaagagagaacaaaagatggagaaatcctgccttagaactttgatgcttgacatttaccttccccgtcaaaattttctgaatgtataaaatagtctg 15575445  T
Q  245 caagggtctt 254  Q
    ||||||||||    
T  15575444 caagggtctt 15575435  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 9725605 - 9725641
Alignment:
Q  114 ttccaacaaataagaaggagttcatcgtggaacccta 150  Q
    |||||||||||||||||| ||||||||||||||||||    
T  9725605 ttccaacaaataagaaggggttcatcgtggaacccta 9725641  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 25939738 - 25939702
Alignment:
Q  114 ttccaacaaataagaaggagttcatcgtggaacccta 150  Q
    |||||||||||||||||| ||||||||||||||||||    
T  25939738 ttccaacaaataagaaggggttcatcgtggaacccta 25939702  T

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Target: chr1 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 150
Target Start/End: Complemental strand, 12810852 - 12810817
Alignment:
Q  115 tccaacaaataagaaggagttcatcgtggaacccta 150  Q
    ||||||||||||||||||||||||| ||||||||||    
T  12810852 tccaacaaataagaaggagttcatcatggaacccta 12810817  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 24903226 - 24903262
Alignment:
Q  114 ttccaacaaataagaaggagttcatcgtggaacccta 150  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  24903226 ttccaacaaataagaaggggttcatcatggaacccta 24903262  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 26658088 - 26658024
Alignment:
Q  145 accctagagagaacaaaagaatgatgaa-tcctgctttggaactctgatgcttgacccttgcctt 208  Q
    |||||||||||||||| ||||||| ||| || | | ||| | |||||||||||||||||||||||    
T  26658088 accctagagagaacaagagaatgaagaaatcattccttgaagctctgatgcttgacccttgcctt 26658024  T

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Target: scaffold0855 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 2442 - 2478
Alignment:
Q  114 ttccaacaaataagaaggagttcatcgtggaacccta 150  Q
    |||||||||||||||||| |||||| |||||||||||    
T  2442 ttccaacaaataagaaggggttcattgtggaacccta 2478  T

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Target: scaffold0847 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 2607 - 2643
Alignment:
Q  114 ttccaacaaataagaaggagttcatcgtggaacccta 150  Q
    |||||||||||||||||| |||||| |||||||||||    
T  2607 ttccaacaaataagaaggggttcattgtggaacccta 2643  T

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