View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14815_high_4 (Length: 293)
Name: NF14815_high_4
Description: NF14815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14815_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 32508260 - 32508519
Alignment:
| Q |
18 |
ccaagttatcttgatgaatggtagcttacctacttactcagctgatttggagacctagattctctgccgtaacaaattcacagtcattgcagttaggtaa |
117 |
Q |
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| T |
32508260 |
ccaagttatcttgatgaatggtagcttacctacttactcagctgatttggagacctagattctctgctgtaacaaattcacagtcattgcagttaggtaa |
32508359 |
T |
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| Q |
118 |
ttataaccgttggatgaagatcaaacatctcatgttccaaatacagttaattcaaacatgaggttggaaaattggtcttctgatcctgatctaatggttg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32508360 |
ttataaccgttggatgaagatcaaacatctcatgtttcaaatacagttaattcaaacatgaggttggaaaattggtcttctgatcctgatctaatggttg |
32508459 |
T |
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| Q |
218 |
tgattttcaccttaattatactatgtgattttactgttttctgaatatgaacctagtata |
277 |
Q |
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| T |
32508460 |
tgattttcaccttaattatactatgtgattttactgttttctgaatatgaacccagtata |
32508519 |
T |
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