View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14816_low_4 (Length: 454)

Name: NF14816_low_4
Description: NF14816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14816_low_4
NF14816_low_4
[»] chr4 (29 HSPs)
chr4 (21-272)||(27632312-27632563)
chr4 (22-272)||(23426065-23426315)
chr4 (18-272)||(53011624-53011877)
chr4 (22-272)||(19661295-19661544)
chr4 (22-272)||(28463487-28463737)
chr4 (18-272)||(32130689-32130942)
chr4 (28-272)||(41038170-41038415)
chr4 (18-272)||(44477949-44478205)
chr4 (22-272)||(11681641-11681892)
chr4 (22-272)||(11689920-11690171)
chr4 (22-272)||(29221520-29221770)
chr4 (22-272)||(23256511-23256758)
chr4 (54-272)||(29579827-29580045)
chr4 (18-272)||(16072505-16072763)
chr4 (22-260)||(21791461-21791695)
chr4 (49-209)||(35653943-35654102)
chr4 (79-272)||(5545301-5545493)
chr4 (22-202)||(43154758-43154936)
chr4 (79-209)||(10575486-10575615)
chr4 (79-176)||(45172640-45172736)
chr4 (22-138)||(21168972-21169088)
chr4 (49-260)||(22423626-22423837)
chr4 (79-202)||(55134180-55134303)
chr4 (36-209)||(34982154-34982325)
chr4 (22-176)||(24449040-24449195)
chr4 (22-176)||(26329026-26329178)
chr4 (146-272)||(51066324-51066449)
chr4 (208-272)||(16887882-16887947)
chr4 (132-168)||(51066667-51066703)
[»] chr8 (26 HSPs)
chr8 (18-260)||(13585210-13585452)
chr8 (18-260)||(18420520-18420762)
chr8 (22-272)||(43967969-43968219)
chr8 (18-271)||(7857996-7858249)
chr8 (18-260)||(3471506-3471753)
chr8 (48-266)||(43926228-43926446)
chr8 (56-260)||(44664957-44665161)
chr8 (54-272)||(18112063-18112282)
chr8 (22-260)||(32098090-32098326)
chr8 (59-222)||(27074526-27074688)
chr8 (18-210)||(42951726-42951926)
chr8 (108-272)||(1004059-1004222)
chr8 (36-209)||(34523914-34524085)
chr8 (28-202)||(3628717-3628889)
chr8 (22-178)||(5869315-5869468)
chr8 (79-202)||(23567244-23567366)
chr8 (36-209)||(12531489-12531660)
chr8 (80-176)||(39697933-39698029)
chr8 (145-259)||(36515069-36515182)
chr8 (93-262)||(29372343-29372510)
chr8 (22-201)||(30915258-30915439)
chr8 (22-176)||(35874840-35874995)
chr8 (22-201)||(33452709-33452885)
chr8 (125-231)||(42777763-42777867)
chr8 (22-87)||(3445597-3445661)
chr8 (109-210)||(42076110-42076212)
[»] chr6 (27 HSPs)
chr6 (18-272)||(57599-57853)
chr6 (18-272)||(3514749-3515003)
chr6 (18-272)||(2618267-2618520)
chr6 (18-272)||(6360672-6360924)
chr6 (18-272)||(6754118-6754371)
chr6 (23-231)||(29149316-29149526)
chr6 (22-260)||(7525078-7525315)
chr6 (34-272)||(12614617-12614852)
chr6 (18-231)||(29401051-29401263)
chr6 (24-260)||(628007-628243)
chr6 (89-265)||(22503728-22503901)
chr6 (56-176)||(3748563-3748683)
chr6 (48-176)||(30915361-30915489)
chr6 (79-176)||(1690628-1690725)
chr6 (81-176)||(14893412-14893507)
chr6 (94-173)||(31860989-31861067)
chr6 (22-176)||(19231529-19231681)
chr6 (79-176)||(350386-350484)
chr6 (79-209)||(29308430-29308559)
chr6 (132-260)||(6294279-6294405)
chr6 (34-106)||(24455146-24455218)
chr6 (109-202)||(21946109-21946201)
chr6 (49-209)||(1093004-1093162)
chr6 (22-176)||(11088472-11088616)
chr6 (208-272)||(31258471-31258536)
chr6 (93-152)||(31234899-31234956)
chr6 (22-86)||(31258543-31258606)
[»] chr1 (43 HSPs)
chr1 (22-272)||(48722269-48722521)
chr1 (22-272)||(30899570-30899823)
chr1 (18-210)||(12884099-12884290)
chr1 (22-260)||(6150636-6150875)
chr1 (18-266)||(14084605-14084853)
chr1 (18-272)||(10109630-10109885)
chr1 (22-260)||(20905197-20905437)
chr1 (22-272)||(29207997-29208247)
chr1 (18-272)||(50552406-50552660)
chr1 (18-272)||(51110000-51110254)
chr1 (35-272)||(17487182-17487419)
chr1 (18-272)||(18127836-18128090)
chr1 (22-272)||(25930518-25930768)
chr1 (80-272)||(28885570-28885762)
chr1 (18-272)||(52055462-52055716)
chr1 (22-260)||(27703442-27703677)
chr1 (22-231)||(33124571-33124781)
chr1 (101-272)||(1-172)
chr1 (22-260)||(30004819-30005052)
chr1 (22-260)||(50371050-50371286)
chr1 (36-209)||(12971336-12971507)
chr1 (22-231)||(5560399-5560606)
chr1 (22-178)||(6333509-6333664)
chr1 (153-272)||(52240435-52240554)
chr1 (22-260)||(15441206-15441441)
chr1 (49-209)||(42740052-42740211)
chr1 (22-209)||(37873725-37873911)
chr1 (81-209)||(17674317-17674444)
chr1 (54-209)||(44836688-44836838)
chr1 (98-209)||(13120829-13120939)
chr1 (79-202)||(24556778-24556900)
chr1 (22-178)||(1269475-1269622)
chr1 (18-101)||(28189309-28189391)
chr1 (79-209)||(22386799-22386929)
chr1 (81-175)||(9777387-9777482)
chr1 (22-86)||(20470643-20470706)
chr1 (209-272)||(20470713-20470777)
chr1 (109-164)||(3907473-3907528)
chr1 (22-202)||(26486343-26486513)
chr1 (49-128)||(31369432-31369511)
chr1 (49-167)||(38263806-38263924)
chr1 (95-150)||(3547674-3547730)
chr1 (108-152)||(32810370-32810414)
[»] chr2 (34 HSPs)
chr2 (22-272)||(26151646-26151897)
chr2 (22-272)||(19367318-19367568)
chr2 (18-272)||(25222234-25222488)
chr2 (22-272)||(42411457-42411706)
chr2 (18-272)||(18676209-18676464)
chr2 (22-272)||(41096436-41096687)
chr2 (22-272)||(7993548-7993798)
chr2 (22-272)||(45618892-45619141)
chr2 (22-272)||(2063721-2063970)
chr2 (22-272)||(13020337-13020588)
chr2 (63-272)||(4855948-4856158)
chr2 (18-260)||(45042299-45042543)
chr2 (22-272)||(6530574-6530824)
chr2 (22-210)||(34061817-34062004)
chr2 (18-256)||(42759671-42759901)
chr2 (18-272)||(12269337-12269589)
chr2 (18-272)||(36481317-36481559)
chr2 (79-209)||(18172903-18173032)
chr2 (22-176)||(39081314-39081467)
chr2 (28-176)||(1418832-1418978)
chr2 (79-209)||(15457472-15457602)
chr2 (49-215)||(36059863-36060027)
chr2 (79-231)||(38985651-38985801)
chr2 (55-202)||(13997262-13997408)
chr2 (79-176)||(18916049-18916146)
chr2 (79-209)||(21747193-21747322)
chr2 (27-202)||(1226236-1226408)
chr2 (97-202)||(27302498-27302602)
chr2 (17-260)||(31273078-31273318)
chr2 (79-209)||(17117608-17117729)
chr2 (109-209)||(38599404-38599502)
chr2 (22-178)||(13001560-13001708)
chr2 (79-209)||(29480600-29480729)
chr2 (125-178)||(9029622-9029675)
[»] chr3 (36 HSPs)
chr3 (22-272)||(23164471-23164720)
chr3 (18-272)||(28132635-28132888)
chr3 (18-272)||(29387653-29387907)
chr3 (20-272)||(46791596-46791848)
chr3 (27-272)||(21784682-21784927)
chr3 (18-272)||(52655022-52655278)
chr3 (22-272)||(8364087-8364338)
chr3 (18-272)||(27729668-27729922)
chr3 (18-272)||(18408103-18408356)
chr3 (22-272)||(24252534-24252785)
chr3 (22-272)||(25598986-25599236)
chr3 (22-260)||(41706963-41707204)
chr3 (22-272)||(51939454-51939704)
chr3 (18-272)||(23067623-23067879)
chr3 (22-219)||(54430468-54430663)
chr3 (48-266)||(13401400-13401619)
chr3 (36-272)||(6715379-6715604)
chr3 (49-209)||(36538149-36538308)
chr3 (110-272)||(20762052-20762214)
chr3 (48-178)||(7767004-7767134)
chr3 (22-176)||(27303103-27303256)
chr3 (36-176)||(21596265-21596404)
chr3 (79-209)||(42009225-42009354)
chr3 (79-202)||(48626999-48627121)
chr3 (59-202)||(19965850-19965992)
chr3 (164-272)||(27110771-27110879)
chr3 (79-209)||(1255015-1255142)
chr3 (94-209)||(50677277-50677391)
chr3 (79-176)||(46904714-46904811)
chr3 (48-257)||(51146879-51147085)
chr3 (114-231)||(15987207-15987322)
chr3 (22-176)||(40152124-40152278)
chr3 (79-173)||(1649829-1649923)
chr3 (22-96)||(27110882-27110956)
chr3 (79-152)||(43905862-43905935)
chr3 (93-172)||(4207357-4207430)
[»] chr7 (35 HSPs)
chr7 (23-272)||(33909980-33910229)
chr7 (18-272)||(6379983-6380238)
chr7 (18-272)||(11672495-11672751)
chr7 (22-272)||(18015479-18015730)
chr7 (23-272)||(36796270-36796520)
chr7 (22-272)||(33419016-33419267)
chr7 (18-272)||(42161021-42161275)
chr7 (34-272)||(44893928-44894166)
chr7 (18-221)||(46221654-46221856)
chr7 (22-231)||(4099883-4100092)
chr7 (94-272)||(12251187-12251365)
chr7 (54-260)||(7636236-7636443)
chr7 (22-260)||(32956690-32956927)
chr7 (18-174)||(8358291-8358447)
chr7 (22-209)||(26633279-26633464)
chr7 (36-202)||(26282510-26282676)
chr7 (81-202)||(773852-773974)
chr7 (22-212)||(30739038-30739227)
chr7 (79-173)||(40001694-40001788)
chr7 (27-260)||(36438264-36438494)
chr7 (22-176)||(41908092-41908247)
chr7 (22-209)||(40841208-40841394)
chr7 (49-209)||(42311952-42312110)
chr7 (22-176)||(9479043-9479196)
chr7 (79-208)||(18895361-18895489)
chr7 (22-161)||(25061820-25061957)
chr7 (49-168)||(40737994-40738113)
chr7 (112-203)||(3799730-3799819)
chr7 (54-209)||(1365956-1366110)
chr7 (22-264)||(41852208-41852446)
chr7 (79-209)||(7366659-7366788)
chr7 (109-202)||(44876126-44876217)
chr7 (19-93)||(12251466-12251539)
chr7 (131-176)||(25610090-25610135)
chr7 (22-69)||(38525100-38525147)
[»] scaffold0126 (1 HSPs)
scaffold0126 (34-272)||(16637-16875)
[»] chr5 (31 HSPs)
chr5 (18-272)||(13474541-13474795)
chr5 (18-272)||(13656119-13656375)
chr5 (19-272)||(12661216-12661474)
chr5 (22-272)||(26377672-26377924)
chr5 (56-272)||(13423813-13424029)
chr5 (56-272)||(19099213-19099429)
chr5 (48-211)||(36718526-36718690)
chr5 (49-209)||(138086-138245)
chr5 (36-209)||(29156120-29156291)
chr5 (36-209)||(43511548-43511719)
chr5 (48-272)||(26311947-26312153)
chr5 (79-209)||(5829357-5829484)
chr5 (49-202)||(4734552-4734704)
chr5 (36-209)||(10591236-10591407)
chr5 (81-209)||(17513899-17514026)
chr5 (22-162)||(27351265-27351404)
chr5 (79-209)||(42291844-42291973)
chr5 (79-176)||(20975957-20976054)
chr5 (22-115)||(8398896-8398989)
chr5 (54-202)||(10033493-10033641)
chr5 (49-260)||(40956255-40956465)
chr5 (22-164)||(23069136-23069277)
chr5 (79-176)||(18873425-18873526)
chr5 (79-209)||(17325816-17325946)
chr5 (111-209)||(7390363-7390460)
chr5 (110-176)||(33281677-33281743)
chr5 (116-209)||(3349692-3349784)
chr5 (49-202)||(40779134-40779286)
chr5 (109-202)||(931382-931469)
chr5 (79-176)||(16515496-16515593)
chr5 (22-154)||(8379538-8379669)
[»] scaffold0181 (1 HSPs)
scaffold0181 (34-272)||(17031-17270)
[»] scaffold0564 (1 HSPs)
scaffold0564 (22-266)||(988-1220)
[»] scaffold0100 (1 HSPs)
scaffold0100 (18-260)||(46086-46326)
[»] scaffold0035 (1 HSPs)
scaffold0035 (132-272)||(22704-22844)
[»] scaffold0606 (1 HSPs)
scaffold0606 (55-178)||(8388-8511)


Alignment Details
Target: chr4 (Bit Score: 161; Significance: 1e-85; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 21 - 272
Target Start/End: Original strand, 27632312 - 27632563
Alignment:
Q  21 attttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||||| ||||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  27632312 attttctttcttcagtacacgtttgagtttttttctagattctagttctcctttttgtacataaatttgatcctatcaaaccacccctaatttgtataat 27632411  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||    
T  27632412 cacttaattagtcaatttgaaaagctacttcattgaaagaatcacatcaatcatttttttcttcgcataaatcattcgctttaccc-ttttccacaacag 27632510  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  27632511 agtagtgacaaatccaaacaacaccgttagataaatttcacctctttcactta 27632563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 23426315 - 23426065
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| |||| |||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||  ||||||||||||||    
T  23426315 ttttctttctttagtatacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtataatc 23426216  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  23426215 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaacaga 23426117  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | |||||| ||| ||||| || | |||||||||||||||| ||||| |||||    
T  23426116 ggagtgacaaatccaaacaacgccgttagataaatttcacctctttcactta 23426065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 53011624 - 53011877
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| |||| |||||| || ||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  53011624 atcattttctttctttagtacacgtttgagttttt-tctaaactctaattctcctttttgtacataaatcagatcctatcaaaccacccctaatttgtat 53011722  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||    
T  53011723 aatcacttaatcagtcaatttggaaagctatttcattaaaagaatcacaacaatcatttttttcttcgcataaaccattcattttaccc-ttttccacaa 53011821  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  53011822 cagaggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 53011877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 19661295 - 19661544
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| || |||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  19661295 ttttctttctttagtacacgtttgagttttt-tctagactctagttctcatttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 19661393  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | |||||||||||||||||||||||||||||| |||||||||| ||||| |||| ||||||| |||||||||||||| |||||||||||| |    
T  19661394 acttaatcagtcaatttggaaagctatttcattgaaagaaacacaacaatcctttttttctttgcataaaccattcgttttaccc-ttttccacaacaaa 19661492  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  19661493 ggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 19661544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 28463737 - 28463487
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| |||| |||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||| ||||||||||||| ||||||||||||||    
T  28463737 ttttctttctttagtaaacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcttatcaaaccacccctaatttgtataatc 28463638  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | |||| ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| ||| |||||||||| |||    
T  28463637 acttaatcaatcaagttgaaaagctatttcattgaaaaaatcacaacaatcatttttttcttcgcataaaccattcgttttgccc-ttttccacaataga 28463539  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  28463538 ggagtgacaaattcaaacgacaccgttagataaatttcacctctttcactta 28463487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 32130942 - 32130689
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||| ||||||  ||||| ||||||| |||||| | ||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  32130942 atcattttctttctttagtacccgtttgagttttt-tctagacactagttcttctttttgtacataaatcggatcctatcaaaccacccctaatttgtat 32130844  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | |||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  32130843 aatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 32130745  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||| |||||| ||| ||||| ||||  ||||||||||||||  ||||| |||||    
T  32130744 cagaggagtgacaaattcaaacgacacaattagataaatttcatctctttcactta 32130689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 28 - 272
Target Start/End: Original strand, 41038170 - 41038415
Alignment:
Q  28 ttcttcagtacacgtttgtatttttgtctagactctagttttcctttta-gtacataaatctgatcctatcaaaccacccttaatttgtataatcactta 126  Q
    ||||| ||||||||||||  ||||| ||||||||||||||||  ||||  |||||||||||  ||||||||||| ||||| |||||||||||||||||||    
T  41038170 ttctttagtacacgtttgagtttttttctagactctagttttttttttttgtacataaatcgaatcctatcaaatcacccctaatttgtataatcactta 41038269  T
Q  127 attactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagt 226  Q
    || | |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||| |||    
T  41038270 atcagtcaatttggaaaactatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaacagaggagt 41038368  T
Q  227 gac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  41038369 gacaaatccaaacgacaccgttagataaatttcacctctttcactta 41038415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 44477949 - 44478205
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagact-ctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 116  Q
    |||||||| |||||| ||||||||||||  ||||| |||| ||| |||||| || |||| ||||||||||| |||||||||||||||||| |||||||||    
T  44477949 atcattttatttctttagtacacgtttgagtttttttctaaacttctagttatcatttttgtacataaatcagatcctatcaaaccacccataatttgta 44478048  T
Q  117 taatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca-tttttctcttcgcataaatcattcgttttaccctttttccac 215  Q
    |||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||||||||| ||||||||    
T  44478049 taatcactaaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcttcgcataaactattcgttttaccc-ttttccac 44478147  T
Q  216 aacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  44478148 aacagaggagtgacaaattcaaacgacaccgttagataaatttcacctctttcactta 44478205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 11681892 - 11681641
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagt-acataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| |||||||  | ||||||||| |||||||||||||||||| |||||| ||||||    
T  11681892 ttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccacccctaatttttataat 11681793  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||| ||| |||||||||| |||||||||||||    
T  11681792 cacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccatccgttttaccc-ttttccacaacag 11681694  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |  |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  11681693 atgagtgacaaatccaaacaacaccgttagataaatttcacctctttcactta 11681641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 11690171 - 11689920
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagt-acataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| |||||||  | ||||||||| |||||||||||||||||| |||||| ||||||    
T  11690171 ttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccacccctaatttttataat 11690072  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||| ||| |||||||||| |||||||||||||    
T  11690071 cacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccatccgttttaccc-ttttccacaacag 11689973  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |  |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  11689972 atgagtgacaaatccaaacaacaccgttagataaatttcacctctttcactta 11689920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 29221770 - 29221520
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||||| | ||||||||  ||||| ||||||||||| || || |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  29221770 ttttctttcttcatttcacgtttgagtttttttctagactctaattctcgtttttgtacataaatctgatcctatcaaaccactcttaatttgtataatc 29221671  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||    |||||||||||  ||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  29221670 acttaaacggtcaatttggaagtctatttcattgaaggaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaacaga 29221572  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | |||||| |||  |||| |||| ||| ||| |||||||| ||||| |||||    
T  29221571 ggagtgacaaatttaaacgacaccgttggattaatttcacctctttcactta 29221520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 23256511 - 23256758
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| ||||||| ||||  ||||| | ||||||| |||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||| |    
T  23256511 ttttctttctt-agtacacatttgagttttttt-tagactccagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataacc 23256608  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||||||| ||||||||||||||    
T  23256609 acttaatcagtcaatttagaaagctatttcaatgaaagaatcacaacaatcattttt-tcttcccataaaccattcgttttaccc-ttttccacaacaga 23256706  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | |||||| ||| ||||| |||| | |||||||||||||| | |||||||||    
T  23256707 ggagtgacaaattcaaacgacaccggtagataaatttcacctattttactta 23256758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 54 - 272
Target Start/End: Original strand, 29579827 - 29580045
Alignment:
Q  54 tctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcat 153  Q
    |||||||||||||| |  |||| |||||||||||||||||||||||||||||| ||||||||||||| | ||||| | |||| ||| ||||||||||||     
T  29579827 tctagactctagttctattttttgtacataaatctgatcctatcaaaccacccataatttgtataattaattaatcagtcaaattgaaaagctatttcaa 29579926  T
Q  154 tgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagata 252  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||||||| || |||||||||||||||||||||| ||| ||||  | || ||||||||    
T  29579927 tgaaagaatcacaacaatcatttttttcttcgcataaacaattcgtttta-ccattttccacaacagagtagtgacaaatccaaatgataccgttagata 29580025  T
Q  253 aatttcacatcttttactta 272  Q
    |||||||| ||||| |||||    
T  29580026 aatttcacctctttcactta 29580045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 16072505 - 16072763
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    |||||||||||||||| |||||||||||  ||||| ||||  |||||| | ||||||| |||||||||| |||||||||||||||| || ||||||||||    
T  16072505 atcattttctttcttcggtacacgtttgagtttttttctaagctctagatctcctttttgtacataaatttgatcctatcaaaccatccctaatttgtat 16072604  T
Q  118 aatcacttaattactcaatttggaaagctatttcatt----gaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttcc 213  Q
    ||||| ||||| | |||||||| ||| |||||||| |    |||||||||||||||||||||||| ||||||||||||  ||| ||||||||| ||||||    
T  16072605 aatcatttaatcagtcaatttgaaaaactatttcaatgaaagaaagaatcacaacaatcatttttttcttcgcataaactatttgttttaccc-ttttcc 16072703  T
Q  214 acaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||||||| |||||| ||  ||||  |||  |||||||||||||||| ||||| |||||    
T  16072704 acaacagaggagtgacaaacccaaatgacatcgttagataaatttcacctctttcactta 16072763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 21791695 - 21791461
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||| |||||||| |||||  ||||| |||||||||||||| ||||||  | |||||||| |||| | ||||||||||| | ||| |||||||||    
T  21791695 ttttctttcatcagtacatgtttgagttttt-tctagactctagttctcctttctgaacataaatttgatgccatcaaaccaccttcaatgtgtataatc 21791597  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | |||||||| |||| ||||||||||||||||||||||||||||||| | | |||||||||| |||| ||||  ||| ||| |||| ||  |    
T  21791596 acttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttct-ttttcgcataaaccatttgttt--cccctttcccacgacgaa 21791500  T
Q  222 gtagtgacaatgcaaaccacactgttagataaatttcac 260  Q
      ||||||||| ||||| ||| |||||| ||||||||||    
T  21791499 tgagtgacaatccaaacgacattgttaggtaaatttcac 21791461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 49 - 209
Target Start/End: Complemental strand, 35654102 - 35653943
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 148  Q
    |||| |||||||||||||| | ||||  | |||||||| |||| ||||||||||||| | |||||||||||||||||||| | |||||||| ||||||||    
T  35654102 ttttttctagactctagttctactttctggacataaatatgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttgaaaagctat 35654003  T
Q  149 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    ||||||||||||||||||||||| |||| | | ||||||||||  ||||||||| ||||||    
T  35654002 ttcattgaaagaatcacaacaattatttct-ttttcgcataaactattcgtttttcccttt 35653943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 272
Target Start/End: Original strand, 5545301 - 5545493
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    |||||||| |||| | |||||||||||   ||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||| |    
T  5545301 acataaatttgatgccatcaaaccaccaccaatttgtataatcacttaatcggtcaatttggaaagctatttcattaaaagaatcacaacaatcatttat 5545400  T
Q  179 ctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
     | |||||||||| |||||||||| ||| || | |||||| ||| |||||| ||| ||||| |||| ||||| |||||||||| ||||| |||||    
T  5545401 -ttttcgcataaaccattcgttttcccccttct-cacaacggaggagtgacaaattcaaacgacaccgttaggtaaatttcacgtctttcactta 5545493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 202
Target Start/End: Complemental strand, 43154936 - 43154758
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| || |||||| ||  ||||| |||||| ||||||| | ||||| | |||||||| |||| ||||||||||||| | |||||||||||||    
T  43154936 ttttctttctttaggacacgtatgagttttt-tctagattctagttctactttttggacataaatttgatgctatcaaaccaccatcaatttgtataatc 43154838  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 202  Q
    ||||||| | |||||||  |||| ||||||||| |||||||||||||||| |||| | | |||||||||||||||||||||    
T  43154837 acttaatcagtcaatttaaaaagttatttcattaaaagaatcacaacaattatttat-ttttcgcataaatcattcgtttt 43154758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 10575615 - 10575486
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    |||||||| | || ||||||||||||||| || ||||||||||||||||| | ||||||| ||||| ||||||||||||| ||||||||||||||||| |    
T  10575615 acataaattttatgctatcaaaccaccctcaacttgtataatcacttaatcagtcaatttagaaagttatttcattgaaataatcacaacaatcatttct 10575516  T
Q  179 ctcttcgcataaatcattcgttttacccttt 209  Q
     | |||||||||| |||||||||| ||||||    
T  10575515 -ttttcgcataaaccattcgttttccccttt 10575486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 45172736 - 45172640
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    ||||||||||| | ||||||||||||||| |||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||||    
T  45172736 acataaatctggtactatcaaaccaccct-aatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaatcacaacaatcattt 45172640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 21168972 - 21169088
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||||||  |||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||| ||||| ||||||||||||||    
T  21168972 ttttctttcttttgtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaatcacccctaatttgtataatc 21169071  T
Q  122 acttaattactcaattt 138  Q
    | ||||| | |||||||    
T  21169072 aattaatgagtcaattt 21169088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 49 - 260
Target Start/End: Original strand, 22423626 - 22423837
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 148  Q
    |||| |||||||||||||| | ||||  | |||||||| |||| ||||||||||||| | ||||||||| |||||||||| | |||||||| ||| ||||    
T  22423626 ttttttctagactctagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtatgatcacttaatcaatcaatttgaaaaactat 22423725  T
Q  149 ttcattgaaagaatcacaacaatcattt-ttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgacaatgcaaaccacactgtt 247  Q
    || ||||||||||||| |||||| |||| || | | | |||||||||||||||||  || |||   || ||| || ||||||| | ||||| |||| |||    
T  22423726 tttattgaaagaatcaaaacaattatttattttttccacataaatcattcgtttt-tccatttcatacgacataggagtgacattccaaacgacaccgtt 22423824  T
Q  248 agataaatttcac 260  Q
    |||||||||||||    
T  22423825 agataaatttcac 22423837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 79 - 202
Target Start/End: Original strand, 55134180 - 55134303
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    |||||||| || | ||||||||||||    |||| ||||||| ||||||| | |||||||| ||||||||||||| |||||||||||||||||||||| |    
T  55134180 acataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaatttgaaaagctatttcatagaaagaatcacaacaatcatttct 55134279  T
Q  179 ctcttcgcataaatcattcgtttt 202  Q
     | ||  |||||||||||||||||    
T  55134280 ttttttacataaatcattcgtttt 55134303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 209
Target Start/End: Original strand, 34982154 - 34982325
Alignment:
Q  36 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 135  Q
    ||||||||||  ||||| |||||||| ||||||| || |  | ||||||||||| | ||| ||||||| ||  |||||||||||||||||||| | ||||    
T  34982154 tacacgtttgagttttt-tctagactttagtttttctatctggacataaatctggtactaacaaaccatccccaatttgtataatcacttaatcagtcaa 34982252  T
Q  136 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    || | ||| ||||||| ||||||||||||||||||| |||| | | |||  |||||||||| ||||| ||||||    
T  34982253 ttggaaaaactatttcgttgaaagaatcacaacaattatttct-ttttcatataaatcatttgttttccccttt 34982325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 24449040 - 24449195
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccaccctt--aatttgtataa 119  Q
    ||||||||||||||||||||| ||  ||||| |||||||||||||| | ||||  | | |||||| |||| ||||||||||||  |   |||||||||||    
T  24449040 ttttctttcttcagtacacgtatgagttttt-tctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataa 24449138  T
Q  120 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    |||||||||   |||||||| ||| ||||||| | ||||||| ||||||||| ||||    
T  24449139 tcacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaattattt 24449195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 26329178 - 26329026
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||||||  ||||||||||| |||||| |||||||| || || ||||||  | ||||||||||||| ||| |||||||||   ||||| |||||||    
T  26329178 ttttctttctttggtacacgtttgaattttt-tctagactgtaattctccttt--ggacataaatctgatgctaccaaaccacctccaatttatataatc 26329082  T
Q  122 acttaattactcaatttggaaagctatttc-attgaaagaatcacaacaatcattt 176  Q
    | | ||| | ||||||| |||||||  ||| ||  ||||||||||||| |||||||    
T  26329081 attcaatcagtcaatttagaaagctgcttcaataaaaagaatcacaacgatcattt 26329026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 51066449 - 51066324
Alignment:
Q  146 tatttcattgaaagaatcacaacaatcatttttctctt-cgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacac 243  Q
    ||||||||||||||||||||||||||||||||| | || |||||||| |||| ||||| ||   || ||| |||  || |||||| ||| ||||  ||||    
T  51066449 tatttcattgaaagaatcacaacaatcattttttttttccgcataaaccatttgttttccc---ttcccaaaacgaaggagtgacaaatccaaatgacac 51066353  T
Q  244 tgttagataaatttcacatcttttactta 272  Q
    |||||| |||||||||| ||||| |||||    
T  51066352 tgttaggtaaatttcacctctttcactta 51066324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 16887947 - 16887882
Alignment:
Q  208 ttttccacaacagagtagtgacaa-tgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||||||||||||  |||||||| | ||||| |||| |||||||||||||||| ||||| |||||    
T  16887947 ttttccacaacagatgagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 16887882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 51066703 - 51066667
Alignment:
Q  132 tcaatttggaaagctatttcattgaaagaatcacaac 168  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  51066703 tcaatttagaaagcaatttcattgaaagaatcacaac 51066667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 1e-82; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 13585210 - 13585452
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| ||||||||||||||||| |||| ||||||||||| |||||||||||||||||| ||||||||||    
T  13585210 atcattttctttctttagtacacgtttgagtttttttctagactctagttttcttttttgtacataaatcagatcctatcaaaccacccctaatttgtat 13585309  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  13585310 aatcaattaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 13585408  T
Q  218 cagagtagtgacaa-tgcaaaccacactgttagataaatttcac 260  Q
    ||||| |||||||| | ||||| || | ||||||||||||||||    
T  13585409 cagaggagtgacaagtccaaacgacgccgttagataaatttcac 13585452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 18420762 - 18420520
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| || ||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  18420762 atcattttctttctttagtacacgtttgagtttttttccagactctagttctcctttttgtacataaatcagatcctatcaaaccacacttaatttgtat 18420663  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||| |||||    
T  18420662 aatcacttaatcagtcaatttgaaaagctgtttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtttta-ccttttttcacaa 18420564  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcac 260  Q
    ||||| |||||| ||| ||||| |||| ||||||||||||||||    
T  18420563 cagaggagtgacaaatccaaacgacaccgttagataaatttcac 18420520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 43968219 - 43967969
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||| | ||||||||||||||    
T  43968219 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccactcctaatttgtataatc 43968120  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| | ||||||||||||||    
T  43968119 acttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttactc-ttttccacaacaga 43968021  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | |||||| ||| ||||| |||   ||||||||||||||| ||||| |||||    
T  43968020 ggagtgacaaatccaaacgacatccttagataaatttcacctctttcactta 43967969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 18 - 271
Target Start/End: Original strand, 7857996 - 7858249
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| | ||||||||| |||||||||||| ||||| ||||||||||    
T  7857996 atcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgaacataaatcggatcctatcaaatcacccctaatttgtat 7858095  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | ||||||||||||| || |||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  7858096 aatcacttaatcagtcaatttggaaagttaattcatttaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 7858194  T
Q  218 cagagtagtg-acaatgcaaaccacactgttagataaatttcacatcttttactt 271  Q
    ||||| |||| | ||| ||||  |||| |||||||||||||||| ||||| ||||    
T  7858195 cagaggagtgaaaaatccaaatgacaccgttagataaatttcacctctttcactt 7858249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 3471506 - 3471753
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgt-----ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatt 112  Q
    ||||||||||||||||||||||| ||||  ||||| |     ||||| ||||||| || |||| |||||||||| |||| |||||||||||||| |||||    
T  3471506 atcattttctttcttcagtacacatttgagttttttttctttctagaatctagttctcatttttgtacataaatgtgattctatcaaaccacccctaatt 3471605  T
Q  113 tgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttc 212  Q
    |||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || ||||| |||||||| |||||    
T  3471606 tgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcatgaaccattcattttaccc-ttttc 3471704  T
Q  213 cacaacagagtagtgaca-atgcaaaccacactgttagataaatttcac 260  Q
    |||||||||| ||||| | || ||||| |||| ||||||||||||||||    
T  3471705 cacaacagaggagtgatagatccaaacgacaccgttagataaatttcac 3471753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 48 - 266
Target Start/End: Complemental strand, 43926446 - 43926228
Alignment:
Q  48 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 147  Q
    ||||| |||||||||||||| | ||||| ||| ||||||| |||||||||||||||||| ||||||||||||| ||||||| | |||||||| |||||||    
T  43926446 tttttttctagactctagttctactttttgtatataaatcggatcctatcaaaccacccataatttgtataattacttaatcagtcaatttgaaaagcta 43926347  T
Q  148 tttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgt 246  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||||| |||| |||||| ||| ||||| |||| ||    
T  43926346 tttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgctttaccc-ttttccacaatagaggagtgacaaatccaaacgacaccgt 43926248  T
Q  247 tagataaatttcacatcttt 266  Q
    || ||||||||||| |||||    
T  43926247 tacataaatttcacctcttt 43926228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 56 - 260
Target Start/End: Complemental strand, 44665161 - 44664957
Alignment:
Q  56 tagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattg 155  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||||  |||||||||| |||||||||| | || |||||||||| ||||||||||    
T  44665161 tagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtatcatcacttaatcagtctatttggaaagttatttcattg 44665062  T
Q  156 aaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaa 254  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||| |||||| ||| ||||| | ||  |||||||||    
T  44665061 aaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaacagaggagtgacaaatccaaacgataccattagataaa 44664963  T
Q  255 tttcac 260  Q
    ||||||    
T  44664962 tttcac 44664957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 54 - 272
Target Start/End: Original strand, 18112063 - 18112282
Alignment:
Q  54 tctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcat 153  Q
    |||||| ||||||| || |||  ||||||||||| |||| ||||||||||| | ||||||||||||||||||||| | |||||||||||| |||||| ||    
T  18112063 tctagaatctagttctcttttatgtacataaatcggatcatatcaaaccactcctaatttgtataatcacttaatcagtcaatttggaaaactattttat 18112162  T
Q  154 tgaaagaatcacaacaatca-tttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagat 251  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||||||| |||||||||| |||| |||||| ||| ||||| |||| |||||||    
T  18112163 tgaaagaatcacaacaatcattttttttcttcgcataaaccattcgttttaccc-ttttccacaatagaggagtgacaaatccaaacgacaccgttagat 18112261  T
Q  252 aaatttcacatcttttactta 272  Q
    |||||| || ||||| |||||    
T  18112262 aaatttaacctctttcactta 18112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 32098326 - 32098090
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||| ||||||| | |||||||| |||| |||||||||||| |||||||||||| |||    
T  32098326 ttttctttcttcagtacacgtttgagttttt-tctagactctagttatcctttttggacataaatttgatgctatcaaaccactcttaatttgtatgatc 32098228  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||||||| |||| | | || ||||||| |||||||||| |||  || ||||||||||    
T  32098227 acttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaattatttct-tttttgcataaaccattcgtttt-ccccattcccacaacaga 32098130  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcac 260  Q
    | |||||| ||| ||||| |||| ||||  ||||||||||    
T  32098129 ggagtgacgaatccaaacgacaccgttacgtaaatttcac 32098090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 27074526 - 27074688
Alignment:
Q  59 actctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaa 158  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||  ||  ||||||||||||||    
T  27074526 actctagtactcctttttgtacataaatctgatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttaaaagtctatttcattgaaa 27074625  T
Q  159 gaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagag 222  Q
     ||||||||||||||||||| |||||||||||| |||| |||||| ||||||||||||||||||    
T  27074626 aaatcacaacaatcatttttttcttcgcataaaccatttgtttta-cctttttccacaacagag 27074688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 42951926 - 42951726
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgt----ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaattt 113  Q
    ||||||||||||||| ||||||||||||  ||||| |    ||||||||||||| || |||| |||||||||||  ||||||||||||||| | ||||||    
T  42951926 atcattttctttctttagtacacgtttgagttttttttcttctagactctagttctcatttttgtacataaatcgaatcctatcaaaccactcctaattt 42951827  T
Q  114 gtataatcacttaattactcaatttggaaagctatttcattgaaagaat----cacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    ||||||||||||||| | |||||||| |||| ||||| |||||||||||    |||||||||||||||| |||||||||||| |||||||||||||||||    
T  42951826 gtataatcacttaatcagtcaatttgaaaagttattttattgaaagaatcacacacaacaatcatttttttcttcgcataaaccattcgttttacccttt 42951727  T
Q  210 t 210  Q
    |    
T  42951726 t 42951726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 272
Target Start/End: Original strand, 1004059 - 1004222
Alignment:
Q  108 taatttgtataatcacttaattactcaatttggaaagct-atttcattgaaagaatcacaacaatca-tttttctcttcgcataaatcattcgttttacc 205  Q
    ||||||||||||||||||||| | |||||||| |||  | ||||||||||||||||||||||||||| ||||| || ||||||||| |||||||||||||    
T  1004059 taatttgtataatcacttaatcagtcaatttgaaaaaattatttcattgaaagaatcacaacaatcattttttttcatcgcataaaccattcgttttacc 1004158  T
Q  206 ctttttccacaacagagtagtgacaatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | ||||||||||||||| ||||||||  ||||| |||| |||||||||||||||| ||||| |||||    
T  1004159 c-ttttccacaacagaggagtgacaa--caaacgacaccgttagataaatttcacctctttcactta 1004222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 36 - 209
Target Start/End: Complemental strand, 34524085 - 34523914
Alignment:
Q  36 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 135  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | ||||||||||| | ||||||||||||||  |||||||||||||||||||| | ||||    
T  34524085 tacacgtttgagttttt-tctagactttagttctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaa 34523987  T
Q  136 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    |||| |||||||||||||||||||||||||||||||||||| | | |||  ||||| |||||||||| ||||||    
T  34523986 tttgaaaagctatttcattgaaagaatcacaacaatcatttct-ttttcatataaaccattcgttttccccttt 34523914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 3628889 - 3628717
Alignment:
Q  28 ttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaa 127  Q
    ||||||||||||||| ||  ||||| |||||||||||||| | | ||  |  ||||||| |||| ||||||||||||| ||||||||||||||||| |||    
T  3628889 ttcttcagtacacgtatgagttttt-tctagactctagttctacattctggtcataaatttgatgctatcaaaccaccattaatttgtataatcacataa 3628791  T
Q  128 ttactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 202  Q
    | | |||||||| |||| |||||||||||||||||||||||||| |||| | | |||||||||| ||||||||||    
T  3628790 tcagtcaatttgaaaagttatttcattgaaagaatcacaacaattatttct-ttttcgcataaaccattcgtttt 3628717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 178
Target Start/End: Complemental strand, 5869468 - 5869315
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||| ||||||||||| |||  ||||| | |||||| ||||| ||||||  |||||||||| |||| |||||||||||||   ||||| || ||||    
T  5869468 ttttctttattcagtacacgattgagttttttt-tagactttagttctcctttctgtacataaat-tgatactatcaaaccaccac-aatttttaaaatc 5869372  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||    
T  5869371 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttt 5869315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 79 - 202
Target Start/End: Complemental strand, 23567366 - 23567244
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    ||||||||||| | ||||||||||||||  |||||||||||||||||||| | |||||||| ||  ||||||||||||||| ||||||||||| |||| |    
T  23567366 acataaatctgctactatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaatactatttcattgaaagtatcacaacaatgatttct 23567267  T
Q  179 ctcttcgcataaatcattcgtttt 202  Q
     | ||| |||||| ||||||||||    
T  23567266 -ttttcacataaaccattcgtttt 23567244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 209
Target Start/End: Original strand, 12531489 - 12531660
Alignment:
Q  36 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 135  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | ||||||||||  | ||||||||| |||   |||||||||||||||||||| | ||||    
T  12531489 tacacgtttgagttttt-tctagactttagttctcctatccgaacataaatcttgtactatcaaactacctccaatttgtataatcacttaatcagtcaa 12531587  T
Q  136 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    |||  ||| |||||||||||||||||||||||||||||||| | | ||| |||||| |||| ||||| ||||||    
T  12531588 tttaaaaatctatttcattgaaagaatcacaacaatcatttct-ttttcacataaaccatttgttttccccttt 12531660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 39698029 - 39697933
Alignment:
Q  80 cataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    ||||||| || | |||||||||||||   ||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  39698029 cataaatttggtactatcaaaccaccaccaatttgtatgatcatttaattagtcaatttgaaaagctatttcattgaaagaatcacaacaattattt 39697933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 36515182 - 36515069
Alignment:
Q  145 ctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgacaatgcaaaccacact 244  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||| ||| | || ||  || ||||||| | ||||| ||||     
T  36515182 ctatttcattgaaagaatcacaacaattatttttttcttcgcataaatcatttgtttt-cccatttcctacgacgtaggagtgacattccaaacgacacc 36515084  T
Q  245 gttagataaatttca 259  Q
    |||||||||||||||    
T  36515083 gttagataaatttca 36515069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 29372343 - 29372510
Alignment:
Q  93 ctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaat 192  Q
    ||||||||| ||||  |||||||||||||| ||||| | ||||||||||||| ||||  ||||||||||| ||||||||||||| | | ||||||||||     
T  29372343 ctatcaaactacccacaatttgtataatcatttaatcagtcaatttggaaagttattcaattgaaagaatgacaacaatcatttattt-ttcgcataaac 29372441  T
Q  193 cattcgttttaccctttttccacaacagagtagtgacaatgcaaaccacactgttagataaatttcacat 262  Q
    ||||| |||| ||||||  |||| |   || ||||||||| ||||| ||||  |||| ||||||||||||    
T  29372442 cattcattttcccctttg-ccacgatgaaggagtgacaatccaaacgacaccattaggtaaatttcacat 29372510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 201
Target Start/End: Complemental strand, 30915439 - 30915258
Alignment:
Q  22 ttttctttcttcagtacacgttt--gtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 119  Q
    |||||||||||| ||| || |||  || ||||| | ||||||||| || ||||||  | ||||| ||||||| ||| |||||| ||   ||| |||||||    
T  30915439 ttttctttcttcggtatacatttaagtttttttttttagactctaattctcctttctggacatagatctgatgctaccaaacctcctccaatatgtataa 30915340  T
Q  120 tcacttaattactcaatttggaaagctatttcatt-gaaagaatcacaacaatcatttttctcttcgcataaatcattcgttt 201  Q
    ||||||||| | |||||||| ||||||||||||||  ||||||||||||||||||||| | | ||||||||||| ||| ||||    
T  30915339 tcacttaatcagtcaatttgaaaagctatttcattaaaaagaatcacaacaatcatttct-ttttcgcataaataatttgttt 30915258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 35874840 - 35874995
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccaccctt--aatttgtataa 119  Q
    ||||||||||||||||||||| ||  ||||| |||||||||||||| | ||||  | | |||||| |||| ||||||||||||  |   |||||||||||    
T  35874840 ttttctttcttcagtacacgtatgagttttt-tctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataa 35874938  T
Q  120 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    |||||||||   |||||||| ||| ||||||| | ||||||| ||||||||| ||||    
T  35874939 tcacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaattattt 35874995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 201
Target Start/End: Original strand, 33452709 - 33452885
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||||||| ||||  |||||  ||||| ||||||||||| || || |||  | |||||||||| ||  ||||||||||||   ||||| |||||||    
T  33452709 ttttctttcttcggtaccagtttgagttttt-tctagactctaattctctttt--ggacataaatcttatggtatcaaaccacctccaatttatataatc 33452805  T
Q  122 acttaattactcaatttggaaagcta-tttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttt 201  Q
    ||| ||||| |||||||| |||| || ||| ||  ||||||||||||||||||||| | | ||||||||||||||| ||||    
T  33452806 actcaattaatcaatttgaaaagttattttaataaaaagaatcacaacaatcatttct-ttttcgcataaatcatttgttt 33452885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 42777763 - 42777867
Alignment:
Q  125 taattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagta 224  Q
    |||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||| | | |||||| | |||||||||| | | ||| ||||||| ||| |    
T  42777763 taattagtcaatttagaaagctatttaattaaaagaatcacaacaatcattttt-tttccgcatataccattcgtttt-ctcatttcccacaacggagga 42777860  T
Q  225 gtgacaa 231  Q
    |||||||    
T  42777861 gtgacaa 42777867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 3445597 - 3445661
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatc 87  Q
    ||||||||||| |||||||||||| |||||| | |||||||||||| ||||||| |||||||||||    
T  3445597 ttttctttctttagtacacgtttgaattttttt-tagactctagttctcctttttgtacataaatc 3445661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 210
Target Start/End: Original strand, 42076110 - 42076212
Alignment:
Q  109 aatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatt-tttctcttcgcataaatcattcgttttaccct 207  Q
    |||||||||||| ||||||| | |||||||| ||||||||  |||||||||||||| || ||| ||| ||| | | ||||||||  ||||||||| ||||    
T  42076110 aatttgtataataacttaatcaatcaatttgaaaagctataacattgaaagaatcataataataattatttttttccgcataaactattcgttttcccct 42076209  T
Q  208 ttt 210  Q
    |||    
T  42076210 ttt 42076212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 3e-80; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 57599 - 57853
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    |||||||||||||||| |||||||||||  ||||| | || ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  57599 atcattttctttcttcggtacacgtttgagtttttttttaaactctagttctcctttttgtacataaatctgatcctatcaaaccacccataatttgtat 57698  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | ||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  57699 aatcacttaatcagtcaatttagaaagctatttcattcaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 57797  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
     |||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  57798 tagaggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 57853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 3515003 - 3514749
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| |||| ||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  3515003 atcattttctttctttagtacacgtttgagtttttttctaaactctagttctcctttttgtacataaatcagatcctatcaaaccacccctaatttgtat 3514904  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    |||||| |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  3514903 aatcacgtaatcattcaatttggaaagctatatcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 3514805  T
Q  218 cagagtagtg-acaatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||| |||| | ||| ||||| ||||  ||||||||||||||| ||||| |||||    
T  3514804 cagaggagtgaaaaatccaaacgacaccattagataaatttcacctctttcactta 3514749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 2618267 - 2618520
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||| ||||| || |||| ||||||||||| |||||||||||||||||| ||||||||||    
T  2618267 atcattttctttctttagtacacgtttgagttttt-tctagactttagttctcttttttgtacataaatcggatcctatcaaaccacccctaatttgtat 2618365  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||    
T  2618366 aatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaattatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 2618464  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||| |||||| ||| ||||| |||| ||| |||||||||||| ||||| |||||    
T  2618465 cagaggagtgacaaatccaaacgacaccgttggataaatttcacctctttcactta 2618520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 6360672 - 6360924
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||||| || |||| | ||||||||| |||||||||||||||||||||||||||||    
T  6360672 atcattttctttctttagtacacgtttgagttttt-tctagactctagttctcttttttgcacataaatcggatcctatcaaaccacccttaatttgtat 6360770  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  6360771 aatcacttaatcagtcaatttgaaaagtta-ttcattgaaagaatcacaacaatcatttttttcttcgtataaaccattcgttttaccc-ttttccacaa 6360868  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||| |||||| ||| ||||| |||| |||||||||||||||  ||||| |||||    
T  6360869 cagaggagtgacaaattcaaacgacaccgttagataaatttcatctctttcactta 6360924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 6754118 - 6754371
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||| ||||||| || |||| ||||||||||| ||||||||||||||| || ||||||||||    
T  6754118 atcattttctttctttagtacgcgtttgagttttt-tctagattctagttctcttttttgtacataaatcggatcctatcaaaccatccctaatttgtat 6754216  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    | ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  6754217 agtcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 6754315  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||| |||||| ||| ||||  |||| |||  ||||||||||| ||||| |||||    
T  6754316 cagaggagtgacaaatccaaatgacaccgttgaataaatttcacctctttcactta 6754371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 23 - 231
Target Start/End: Original strand, 29149316 - 29149526
Alignment:
Q  23 tttctttcttcagtacacgtttg---tatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 119  Q
    |||||||||| ||||||||||||   | ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||| | ||||||||||||    
T  29149316 tttctttctttagtacacgtttgagttgtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacacctaatttgtataa 29149415  T
Q  120 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 219  Q
    ||||||||| | ||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  29149416 tcacttaatcagtcaatttggaaagttagttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaaca 29149514  T
Q  220 gagtagtgacaa 231  Q
    ||| ||||||||    
T  29149515 gaggagtgacaa 29149526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 7525315 - 7525078
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||| |||||| ||||||||||||  ||||| |||||||||||||| ||| ||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  7525315 ttttttttctttagtacacgtttgagtttttttctagactctagttctccattttgtacataaatcggatcctatcaaaccacccataatttgtataatc 7525216  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | ||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||  |||  |||||||| ||||||||||||||    
T  7525215 acttaatcagtcaatttggaaagttattttattgaaagaatcacaacaatcatttttttcttcgcataaacaatttattttaccc-ttttccacaacaga 7525117  T
Q  222 gtagtgacaatgcaaaccacactgttagataaatttcac 260  Q
    | ||||||||  | ||  |||| ||||||||||||||||    
T  7525116 ggagtgacaaatccaaagacaccgttagataaatttcac 7525078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 34 - 272
Target Start/End: Complemental strand, 12614852 - 12614617
Alignment:
Q  34 agtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactc 133  Q
    ||||||||||||  ||||| | |||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| | ||    
T  12614852 agtacacgtttgagttttttt-tagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtc 12614754  T
Q  134 aatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aat 232  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||||||||||||||| ||| || |||    
T  12614753 aatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatccgttttaccc-ttttccacaacagaggagtaacaaat 12614655  T
Q  233 gcaaaccacactgttagataaatttcacatcttttactta 272  Q
     |||||   || |||||||||||||||| ||||| |||||    
T  12614654 tcaaac--gaccgttagataaatttcacctctttcactta 12614617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 29401051 - 29401263
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| ||| ||||||||||||| |||| |||||||||||  |||||||||||| |||| ||||| ||||    
T  29401051 atcattttctttctttagtacacgtttgagtttttttcttgactctagttttcatttttgtacataaatcgaatcctatcaaactacccctaattagtat 29401150  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| |||||||| |    
T  29401151 aatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtcttaccc-ttttccacga 29401249  T
Q  218 cagagtagtgacaa 231  Q
    ||||| ||||||||    
T  29401250 cagaggagtgacaa 29401263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 24 - 260
Target Start/End: Complemental strand, 628243 - 628007
Alignment:
Q  24 ttctttcttcagtacacgtttgtattt-ttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatca 122  Q
    ||||||||| |||||| |||||  ||| || ||||||||||||||  |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||    
T  628243 ttctttctttagtacatgtttgattttcttttctagactctagttcacctttttgtacacaaatcagatcttatcaaaccacccctaatttgtataatca 628144  T
Q  123 cttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagag 222  Q
    |||||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  || |||||||||||||||    
T  628143 cttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtttt--cccttttccacaacagag 628046  T
Q  223 tagtga-caatgcaaaccacactgttagataaatttcac 260  Q
     |||||  ||| ||||| |||  ||||||||||||||||    
T  628045 aagtgataaatccaaacgacatcgttagataaatttcac 628007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 265
Target Start/End: Original strand, 22503728 - 22503901
Alignment:
Q  89 gatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcat 188  Q
    |||||||||||||||| | |||||   ||||||||||||| | |||||||| ||| ||||||| |||||||||| | ||||||||||||| |||||| ||    
T  22503728 gatcctatcaaaccactcataatt---ataatcacttaatcagtcaatttgaaaaactatttcgttgaaagaattaaaacaatcatttttttcttcgtat 22503824  T
Q  189 aaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatctt 265  Q
    ||| ||||| |||||||| ||||||||||||||| |||||| ||| ||||  |||| |||||||||||||||| ||||    
T  22503825 aaaccattcattttaccc-ttttccacaacagagaagtgacaaattcaaatgacaccgttagataaatttcacctctt 22503901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 176
Target Start/End: Complemental strand, 3748683 - 3748563
Alignment:
Q  56 tagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattg 155  Q
    |||| ||||||| | ||||| | |||||||| |||| |||||||||| || | |||||||||||||||||||| | |||||||| |||||||||||||||    
T  3748683 tagattctagttctactttttggacataaatttgatgctatcaaaccgccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcattg 3748584  T
Q  156 aaagaatcacaacaatcattt 176  Q
    |||||||||||||||| ||||    
T  3748583 aaagaatcacaacaattattt 3748563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 30915489 - 30915361
Alignment:
Q  48 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 147  Q
    ||||| |||||||||||||| | ||||  | |||||||| |||| |||||||||| || | |||||||||||| ||||||| | |||||||| |||||||    
T  30915489 tttttttctagactctagttctactttctggacataaatttgatgctatcaaacccccatcaatttgtataattacttaatcagtcaatttgaaaagcta 30915390  T
Q  148 tttcattgaaagaatcacaacaatcattt 176  Q
    ||| |||||||||||||||||||||||||    
T  30915389 tttaattgaaagaatcacaacaatcattt 30915361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 1690725 - 1690628
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    ||||||||||| | |||||||||||||   ||||||||||||||||| || | |||||||| |||  |||||||||||||||||||||||||||||||    
T  1690725 acataaatctggtactatcaaaccaccaccaatttgtataatcacttgatcaatcaatttgaaaatttatttcattgaaagaatcacaacaatcattt 1690628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 14893507 - 14893412
Alignment:
Q  81 ataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    ||||||||||| ||||||||| || || |||||||||||| ||||||| | |||||||| ||| ||||||| || |||||||||||||||||||||    
T  14893507 ataaatctgatgctatcaaacaactctgaatttgtataattacttaatcagtcaatttgaaaaactatttcgttaaaagaatcacaacaatcattt 14893412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 31860989 - 31861067
Alignment:
Q  94 tatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca 173  Q
    |||||||||||||  |||||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  31860989 tatcaaaccacccc-aatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 31861067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 19231529 - 19231681
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||| ||||||||| |||||||||  ||||| |||||| | ||||| | ||||  | ||||||||||| | ||||||||| ||| | |||||||||| ||    
T  19231529 ttttttttcttcaggacacgtttgagttttt-tctagagtttagttctactttctggacataaatctggtgctatcaaactaccttcaatttgtata-tc 19231626  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    ||||||| | |||||||| ||||||||  |||||||| |||||||||||||||||    
T  19231627 acttaatcaatcaatttgaaaagctatgacattgaaaaaatcacaacaatcattt 19231681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 350386 - 350484
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttc-attgaaagaatcacaacaatcattt 176  Q
    |||||||| |||| ||||||||||||| | ||||| |||||||||| ||| | ||||||| |||||||||||| ||  |||||||||||||||||||||    
T  350386 acataaatatgatgctatcaaaccaccatcaatttatataatcactcaatcagtcaatttcgaaagctatttcaataaaaagaatcacaacaatcattt 350484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 29308559 - 29308430
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    |||||||| || | ||||||||||||    |||| ||||||| ||||||| | |||||||| ||| |||||||||||||  ||||||||||||||||| |    
T  29308559 acataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaatttgaaaaactatttcattgaagtaatcacaacaatcatttct 29308460  T
Q  179 ctcttcgcataaatcattcgttttacccttt 209  Q
     | ||| ||||||||||||||||| ||||||    
T  29308459 -ttttcacataaatcattcgttttccccttt 29308430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 260
Target Start/End: Original strand, 6294279 - 6294405
Alignment:
Q  132 tcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgacaa 231  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| | | ||||||||||  ||||||||| ||| ||| |||| ||  || |||||||     
T  6294279 tcaatttgaaaagcaatttcattgaaagaatcacaacaatcatttct-ttttcgcataaactattcgtttt-cccctttcccacgacgtaggagtgacat 6294376  T
Q  232 tgcaaaccacactgttagataaatttcac 260  Q
    | ||||| |||| ||||| ||||||||||    
T  6294377 tccaaacgacaccgttaggtaaatttcac 6294405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 24455146 - 24455218
Alignment:
Q  34 agtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccaccc 106  Q
    |||||||||||| |||||| |||||||||||||| |||||||  || ||||||| ||||||||||||||||||    
T  24455146 agtacacgtttgaatttttttctagactctagttctcctttttatatataaatcggatcctatcaaaccaccc 24455218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 21946109 - 21946201
Alignment:
Q  109 aatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 202  Q
    |||||||||||||||||||| | || ||||| ||||||||||||||||||||| || |||||| |||| | | ||||||||||  |||||||||    
T  21946109 aatttgtataatcacttaatcagtctatttgaaaagctatttcattgaaagaaccataacaattatttct-ttttcgcataaacaattcgtttt 21946201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 209
Target Start/End: Complemental strand, 1093162 - 1093004
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 148  Q
    |||| |||||||| ||||| |||| |  | |||||||| || | ||||||||||||    |||| ||||||| ||| ||| | |||||||  ||||||||    
T  1093162 ttttttctagactttagttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgactaaatcagtcaatttaaaaagctat 1093063  T
Q  149 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    ||||| |||||||||||||||||||||| | | ||| |||||| |||||||||| ||||||    
T  1093062 ttcat-gaaagaatcacaacaatcatttct-ttttcacataaaccattcgttttccccttt 1093004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 11088472 - 11088616
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||| ||| |||||||||||  ||||| ||||||||||| || ||||||  | ||||||||||||| ||| ||||||||||  ||||| |||||||    
T  11088472 ttttcttttttcggtacacgtttgagttttt-tctagactctaattctccttt--ggacataaatctgatgctaccaaaccacccccaatttatataatc 11088568  T
Q  122 acttaattactcaatttggaaagctatttc-attgaaagaatcacaacaatcattt 176  Q
            | |||||||| ||||||||||| ||  |||||||||||||||||||||    
T  11088569 --------agtcaatttgaaaagctatttcaataaaaagaatcacaacaatcattt 11088616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 31258536 - 31258471
Alignment:
Q  208 ttttccacaacagagtagtgacaa-tgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||||||||||||| |||||||| | ||||| |||| |||||||||||||||| ||||| |||||    
T  31258536 ttttccacaacagaggagtgacaaatccaaacaacaccgttagataaatttcacctctttcactta 31258471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 31234899 - 31234956
Alignment:
Q  93 ctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttca 152  Q
    ||||||||||| ||  |||||||||||||||||||| | |||||||| ||||||||||||    
T  31234899 ctatcaaaccatcc--aatttgtataatcacttaatcaatcaatttgaaaagctatttca 31234956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 31258606 - 31258543
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaat 86  Q
    ||||||||||| ||||||||||||  ||||| ||||||||||| || ||||||| ||||||||||    
T  31258606 ttttctttctttagtacacgtttgagttttt-tctagactctaattatcctttttgtacataaat 31258543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 1e-79; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 48722521 - 48722269
Alignment:
Q  22 ttttctttcttcagtacacgtttg--tatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 119  Q
    ||||||||||| ||||||||||||  | ||||| ||||||||||| || || |||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  48722521 ttttctttctttagtacacgtttgagtttttttttctagactctatttctcatttttgtacataaatcggatcctatcaaaccacccctaatttgtataa 48722422  T
Q  120 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 219  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  48722421 tcacttaatcagtcaatttggaaagctatttcattgaaataatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaaca 48722323  T
Q  220 gagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||| |||||| ||| ||||| |||| |||||||||||||||| |||||||||||    
T  48722322 gaggagtgacaaatccaaacgacaccgttagataaatttcacctcttttactta 48722269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 30899570 - 30899823
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    ||||||||||| ||||||||||||  ||||| | ||||||||||||| ||||||| ||||||||||| |||||||||||| ||||| |||||||||||||    
T  30899570 ttttctttctttagtacacgtttgagttttttttctagactctagttctcctttttgtacataaatcggatcctatcaaatcacccctaatttgtataat 30899669  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca--tttttctcttcgcataaatcattcgttttaccctttttccacaac 218  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| |||||||||||||| |||||||||||    
T  30899670 cacttaattagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttttcttcgcataaaccattcgttttaccc-ttttccacaac 30899768  T
Q  219 agagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |||| | |||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  30899769 agaggaatgacaaatccaaacgacaccgttagataaatttcacctctttcactta 30899823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 12884290 - 12884099
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  12884290 atcattttctttctttagtacacgtttgagtttttttctagactctagttttcctttttgtacataaatcggatcctatcaaaccacccctaatttgtat 12884191  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttt 210  Q
    ||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  12884190 aatcacttaatcagtcaatttaaaaagctatttcattgaaagaatcacaacaatcattttt-tcttcgcataaaccattcgttttaccctttt 12884099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 6150636 - 6150875
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||||  || |||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||| |||||||    
T  6150636 ttttctttcttcgctatacgtttgagtttttttctagactctagttctcctttttgtacataaatcagatcctatcaaaccacccctaatttatataatc 6150735  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    | ||||| | |||||||| ||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||||||||||||| |||||||||||||||    
T  6150736 atttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcaattttttcttcacataaaccattcgttttaccttttttccacaacaga 6150835  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcac 260  Q
    | |||||| ||| ||||| |||| ||||||||||||||||    
T  6150836 ggagtgacaaatccaaacgacaccgttagataaatttcac 6150875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 18 - 266
Target Start/End: Complemental strand, 14084853 - 14084605
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||||||| ||||||| |||||||||||||||||||||||| ||||| |||  |||||    
T  14084853 atcattttctttcttcagtacaggtttgaattttt-tctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaaaatgtat 14084755  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatc-atttttctcttcgcataaatcattcgttttaccctttttccaca 216  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||||||||||| || ||||||    
T  14084754 aatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaataatcaatttttttcttcgcataaaccattcgttttaccc-ttctccaca 14084656  T
Q  217 acagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttt 266  Q
    |||||| |||||| ||| ||||| ||||  ||||||||||||||| |||||    
T  14084655 acagaggagtgacaaatccaaacgacaccattagataaatttcacctcttt 14084605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 10109630 - 10109885
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 116  Q
    |||||||||||| || | ||||||||||  ||||| | ||||||||||||| ||||||| ||||||||||  |||||||||||||||||  |||||||||    
T  10109630 atcattttctttttttattacacgtttgagttttttttctagactctagttctcctttttgtacataaattggatcctatcaaaccaccactaatttgta 10109729  T
Q  117 taatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccaca 216  Q
    |||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||    
T  10109730 taatcacttaatcagtcaatttggaaagcaatttcattgaaagaatcacaacaatcatttttttcttcgcataaactattcgttttaccc-ttttccaca 10109828  T
Q  217 acagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |||||| |||||| ||| ||||| || | |||||||||||||||| ||||| |||||    
T  10109829 acagaggagtgacaaatccaaacgacgccgttagataaatttcacctctttcactta 10109885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 20905437 - 20905197
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttt-tgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    ||||||||||| ||||||||||||  |||| | |||||||||||||| ||||||| |||||||||||| |||||||||||||| || |||||||||||||    
T  20905437 ttttctttctttagtacacgtttgagttttatttctagactctagttctcctttttgtacataaatctaatcctatcaaaccagccctaatttgtataat 20905338  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    |||||| | | |||||||||||  ||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  20905337 cacttattcagtcaatttggaagtctatttcattgaaagaatcacaacaataatttttttcttcgtataaaccattcgttttaccctttttccacaacag 20905238  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcac 260  Q
    || |||||| ||| ||||| |||| ||| ||||||||||||    
T  20905237 aggagtgacaaatccaaacgacaccgttggataaatttcac 20905197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 29208247 - 29207997
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||| || |||| |||||||||||| ||| ||||||||||||| ||||||||||||||    
T  29208247 ttttctttcttcggtacacgtttgaatttttttctagactctagttctcttttttgtacataaatctaatcatatcaaaccacccctaatttgtataatc 29208148  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    | ||||| | ||||| |||||  |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||| |||    
T  29208147 atttaatcagtcaatctggaagtctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaataga 29208049  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | |||||| ||| ||||  |||| ||| |||||||||||  |||||||||||    
T  29208048 ggagtgacaaatccaaatgacaccgttggataaatttcatctcttttactta 29207997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 50552406 - 50552660
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| | |||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  50552406 atcattttctttctttagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtat 50552505  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    |||||||||||   |||||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||||| ||||| ||||| |||||||||||||    
T  50552506 aatcacttaatcggtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgtataaaccattcatttta-cctttttccacaa 50552604  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || || |||||| ||| ||||| ||||  ||||||||||||||  ||||| |||||    
T  50552605 cataggagtgacaaatccaaacgacaccattagataaatttcatctctttcactta 50552660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 51110254 - 51110000
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||| ||||| ||||||| ||||||||||| |||||||||||||||||| |||||| |||    
T  51110254 atcattttctttctttagtacacgtttgagtttttttctagactatagttatcctttttgtacataaatcggatcctatcaaaccacccctaatttctat 51110155  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||||||||||| | |||| |||||||||||| |||| |||||| || ||||||||||    
T  51110154 aatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaacaataagttttttcttcgcataaaccatttgttttatcc-ttttccacaa 51110056  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || || |||||| ||| ||||  |||| |||||||||||||||| ||||| |||||    
T  51110055 caaaggagtgacaaattcaaatgacaccgttagataaatttcacctctttcactta 51110000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 17487419 - 17487182
Alignment:
Q  35 gtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactca 134  Q
    |||||| ||||  ||||| |||||||||||||| |||||||  |||||||||| |||||||||||||||||| |||||| |||||||||||||| | |||    
T  17487419 gtacacatttgagtttttttctagactctagttctcctttttttacataaatcggatcctatcaaaccacccctaatttatataatcacttaataaatca 17487320  T
Q  135 atttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatg 233  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| || ||||||||||||||| |||||| |||     
T  17487319 atttggaaagttatttcattgaaagaatcacaacaatcatttttttctttgcataaaccattcgttttatcc-ttttccacaacagaggagtgacaaatc 17487221  T
Q  234 caaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||| || | |||||||||||||||| ||||| |||||    
T  17487220 caaacaacgccgttagataaatttcacctctttcactta 17487182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 18128090 - 18127836
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 116  Q
    ||||||||||||||| ||||||||||||  ||||| | ||||| ||||||| ||||||| |||| |||||| |||||||||||||||||| |||||||||    
T  18128090 atcattttctttctttagtacacgtttgagttttttttctagattctagttctcctttt-gtacgtaaatcggatcctatcaaaccacccataatttgta 18127992  T
Q  117 taatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccaca 216  Q
    |||||||||||| | |||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||||||  ||||||||||||| |||||||||    
T  18127991 taatcacttaatcagtcaatttgaaaagctatttcattgcaagaatcacaacaattatttttttcttcgcataaactattcgttttaccc-ttttccaca 18127893  T
Q  217 acagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||| || |||||| ||| ||||| |||| ||||| ||||||| || ||||| |||||    
T  18127892 acaaaggagtgacaaatccaaacgacaccgttaggtaaattttacctctttcactta 18127836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 25930518 - 25930768
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttt-tgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    |||||||| ||| |||||||||||  |||| |||||||||||||||| || |||| ||||||||||||||||||||||||| |||| |||||||||||||    
T  25930518 ttttcttttttcggtacacgtttgagttttttgtctagactctagttctcatttttgtacataaatctgatcctatcaaactacccctaatttgtataat 25930617  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    |||||||| | |||| ||| ||||||||||||||||||| |||||||||||||||||| |||| | ||||| |||| ||||||||| |||||||||||||    
T  25930618 cacttaatcagtcaacttgaaaagctatttcattgaaaggatcacaacaatcattttt-tctttggataaaccatttgttttaccc-ttttccacaacag 25930715  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |  |||||| ||| ||||| |||| |||||||||||||||  ||||| |||||    
T  25930716 atgagtgacaaatccaaacgacaccgttagataaatttcatctctttcactta 25930768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 80 - 272
Target Start/End: Complemental strand, 28885762 - 28885570
Alignment:
Q  80 cataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttc 179  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||||     
T  28885762 cataaatcggatcctatcaaaccacccataatttgtataatcacttaatcaatcaattttgaaagctatttcattgtaagaatcacaacaatcatttttt 28885663  T
Q  180 tcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |||||||||||| |||||||||||  ||||||||||||||||  |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  28885662 tcttcgcataaaccattcgtttta-tctttttccacaacagatgagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 28885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 52055462 - 52055716
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtct-agactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 116  Q
    |||||||||||||||||||| |||||||  ||||| | | ||||||||||| ||||||| |||||||||||| ||| |||||||| | || |||||| ||    
T  52055462 atcattttctttcttcagtatacgtttgagttttttttttagactctagttctcctttttgtacataaatctaatcatatcaaactatccataatttata 52055561  T
Q  117 taatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccaca 216  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| |||||||||||||| |||| ||||    
T  52055562 taatcacttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaatcagtttttccttcgcataaaccattcgttttaccc-ttttacaca 52055660  T
Q  217 acagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | |||| |||||| |||  |||| |||| ||||||||||||| || ||||| |||||    
T  52055661 a-agaggagtgacaaatctaaacgacaccgttagataaattttacctctttcactta 52055716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 27703677 - 27703442
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| || |||| | |||||||| |||| ||||||||||||||  |||||||||||||    
T  27703677 ttttctttctttagtacacgtttgagttttt-tctagactctagttctcttttttgaacataaatttgatgctatcaaaccacccccaatttgtataatc 27703579  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | |||||||||||||||||||||| ||||||||||||||||||| |||  | |||||||||| |||||||||| ||| |||||||| || ||    
T  27703578 acttaatcagtcaatttggaaagctatttcatcgaaagaatcacaacaatca-tttcattttcgcataaaccattcgtttttccc-ttttccaccacgga 27703481  T
Q  222 gtagtgacaatgcaaaccacactgttagataaatttcac 260  Q
      ||||||||| ||||| |||||||||| ||||||||||    
T  27703480 agagtgacaatccaaacgacactgttaggtaaatttcac 27703442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 33124781 - 33124571
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactcta--gttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 119  Q
    ||||||||||| ||||||||||||  ||||| | |||||||||  ||| |||||||  |||||||||| |||||||| ||||||||  ||||||||||||    
T  33124781 ttttctttctttagtacacgtttgagtttttttttagactctatagttctcctttttctacataaatcggatcctattaaaccacctctaatttgtataa 33124682  T
Q  120 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 219  Q
    ||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| || || ||||||||||||    
T  33124681 tcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcacataaaccattcgttata-ccattttccacaaca 33124583  T
Q  220 gagtagtgacaa 231  Q
    ||| ||||||||    
T  33124582 gaggagtgacaa 33124571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 101 - 272
Target Start/End: Original strand, 1 - 172
Alignment:
Q  101 ccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtt 200  Q
    |||||||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  1 ccacccttaatttgtataatcacttaatcagtcaatttggaaagtgatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtt 100  T
Q  201 ttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |||||| ||||| ||||||||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  101 ttaccc-ttttctacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 30005052 - 30004819
Alignment:
Q  22 ttttctttcttcagtacacgtttg--tatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 119  Q
    |||||||| ||| |||||||||||  | ||||| ||||||||||| || ||||||| ||||||||||| |||||||||||||||      ||||||||||    
T  30005052 ttttcttttttcggtacacgtttgagtttttttttctagactctacttctcctttttgtacataaatccgatcctatcaaacca------atttgtataa 30004959  T
Q  120 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 219  Q
    ||||||||| | | |||||| ||||||||||||||||||||||| |||||||||||| | ||||| |||||| ||||||||||| |||||||||||||||    
T  30004958 tcacttaatcaattaatttgaaaagctatttcattgaaagaatcgcaacaatcatttgt-tcttcccataaaccattcgtttta-cctttttccacaaca 30004861  T
Q  220 gagtagtgac-aatgcaaaccacactgttagataaatttcac 260  Q
    ||| |||||| ||| ||||| | || ||||||||||||||||    
T  30004860 gaggagtgacaaattcaaacgataccgttagataaatttcac 30004819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 50371050 - 50371286
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||||| ||| | |||| |||| | |||||||||||||| ||||||  | | |||||  |||| |||||||| |||||| |||||||||||||    
T  50371050 ttttctttcttcaatacgcatttggatttct-tctagactctagttctcctttctggatataaagttgatgctatcaaatcaccctcaatttgtataatc 50371148  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | |||||||| ||| || ||||||||||||||||||||||||||||| | | ||||||||||||||| ||||| ||| ||  ||||||| ||    
T  50371149 acttaatcagtcaatttgaaaaactgtttcattgaaagaatcacaacaatcatttct-ttttcgcataaatcattagtttttccc-ttacccacaacgga 50371246  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcac 260  Q
    | |||||| ||| ||||| |||  ||||| ||||||||||    
T  50371247 ggagtgacaaatccaaacaacatcgttaggtaaatttcac 50371286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 36 - 209
Target Start/End: Original strand, 12971336 - 12971507
Alignment:
Q  36 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 135  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | |||||||||||||  |||||||||||||  |||||||||||||||||||| | ||||    
T  12971336 tacacgtttgagttttt-tctagactttagttctcctatctggacataaatctgatattatcaaaccacccccaatttgtataatcacttaatcagtcaa 12971434  T
Q  136 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    |||| ||||||||||||| |||||||||||||||||||||| | | ||| |||||| |||||||||| ||||||    
T  12971435 tttgaaaagctatttcatcgaaagaatcacaacaatcatttct-ttttcacataaaccattcgttttccccttt 12971507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 5560399 - 5560606
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||||||||||||||||   |||| | |||||| ||||| || |||  | ||||||||||| | ||| ||||||||||  |||||||||||||    
T  5560399 ttttctttcttcagtacacgtttgagatttttt-tagactatagttctcatttctggacataaatctggtgctaccaaaccacccccaatttgtataatc 5560497  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | |||||||  |||| ||||||||||||||||||||||||||||| ||| | | ||||||||  |||| |||| | ||||| ||||||| ||    
T  5560498 acttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaatcatatttttttccgcataaactattcatttt-ctcttttcccacaacgga 5560596  T
Q  222 gtagtgacaa 231  Q
    | ||||||||    
T  5560597 ggagtgacaa 5560606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 22 - 178
Target Start/End: Complemental strand, 6333664 - 6333509
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||||||| |||||||||||  ||||| | |||||||||||| || ||   ||||||||||||||| ||||||||||| ||| ||| |||| ||||    
T  6333664 ttttctttcttcggtacacgtttgagtttttctttagactctagttctcattcctgtacataaatctgatactatcaaaccatcct-aatctgtaaaatc 6333566  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    ||||||| | |||| |||||||| ||||| ||| |||||||||||||||||||||||    
T  6333565 acttaatcagtcaaattggaaagttattttattaaaagaatcacaacaatcattttt 6333509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 153 - 272
Target Start/End: Complemental strand, 52240554 - 52240435
Alignment:
Q  153 ttgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagat 251  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||||||||| || ||| ||| ||||| ||||||||||||    
T  52240554 ttgaaagaatcacaacaatcatttttttcttcgcataaatcattcattttgccc-ttttccacaacagaggagcgacaaattcaaacgacactgttagat 52240456  T
Q  252 aaatttcacatcttttactta 272  Q
    ||||||||| ||||| |||||    
T  52240455 aaatttcacctctttcactta 52240435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 15441206 - 15441441
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttt-tagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    ||||||||||||  ||||||||||  ||||| |||||||||||||| |||||| ||| |||||||| | || |||||||||||||   ||||||||||||    
T  15441206 ttttctttcttcgatacacgtttgagttttt-tctagactctagttctcctttctag-acataaatataatgctatcaaaccacctacaatttgtataat 15441303  T
Q  121 cacttaattactcaatttggaaagctatttcatt-gaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 219  Q
    |||||||| |||||||||  ||||||||||||||  |||||||||||||||| ||| |  | || ||||||||||||| ||||  || ||||||||||||    
T  15441304 cacttaatcactcaatttataaagctatttcattaaaaagaatcacaacaataattct--tttttgcataaatcattcatttt--cccttttccacaaca 15441399  T
Q  220 gagtagtgac-aatgcaaaccacactgttagataaatttcac 260  Q
    ||  |||||| ||| ||||| || | ||||| ||||||||||    
T  15441400 gaagagtgacaaatccaaacgacgccgttaggtaaatttcac 15441441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 42740052 - 42740211
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 148  Q
    |||| |||||||||||||| | ||||  | |||||| | |||| ||||||||| ||| | |||||||||||| ||||||||| |||||||| ||| ||||    
T  42740052 ttttttctagactctagttctactttctggacataagtttgatgctatcaaacaaccatcaatttgtataataacttaattagtcaatttgaaaaactat 42740151  T
Q  149 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    ||||||||||||||| ||||||| |||| | | ||||||||||  ||||||||| ||||||    
T  42740152 ttcattgaaagaatcgcaacaattatttct-ttttcgcataaacaattcgttttccccttt 42740211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 22 - 209
Target Start/End: Complemental strand, 37873911 - 37873725
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttt-tagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    |||| ||||| | |||||||| ||  ||||| |||||||||||||| | |||| ||| |||||||| |||| ||||||||||||| | |||||||||| |    
T  37873911 ttttttttctccggtacacgtatgagtttttttctagactctagttctactttctag-acataaatttgatgctatcaaaccaccatcaatttgtatagt 37873813  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt-ttctcttcgcataaatcattcgttttacccttt 209  Q
    |||||||| | | |||||| ||| || |||||||||||||||||||||||| |||| || |||  ||||||| |||||||||| ||||||    
T  37873812 cacttaatcagttaatttgaaaaactgtttcattgaaagaatcacaacaattatttcttttct--gcataaaccattcgttttccccttt 37873725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 17674444 - 17674317
Alignment:
Q  81 ataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttct 180  Q
    |||||| |||| |||| |||||||| | |||||| ||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||| |||| | |    
T  17674444 ataaatttgatgctattaaaccaccatcaatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaattatttct-t 17674346  T
Q  181 cttcgcataaatcattcgttttacccttt 209  Q
     |||||||||| |||| ||||| ||||||    
T  17674345 tttcgcataaaccatttgttttccccttt 17674317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 44836838 - 44836688
Alignment:
Q  54 tctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcat 153  Q
    |||||| ||||||| | ||||  | |||||||| |||| ||||||||||||| | |||||||||||||||||||| | |||||||| ||| ||||||||     
T  44836838 tctagattctagttctactttctgaacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcac 44836739  T
Q  154 tgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    ||||||||||||    ||||||| | | |||||||||| |||||||||| ||||||    
T  44836738 tgaaagaatcac----atcatttct-ttttcgcataaaccattcgtttttcccttt 44836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 98 - 209
Target Start/End: Complemental strand, 13120939 - 13120829
Alignment:
Q  98 aaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattc 197  Q
    |||||||| |||||||| ||||||||||||| | |||||||| ||| ||||||||||||||||||||| ||||| |||| | | |||||||||| |||||    
T  13120939 aaaccaccattaatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcaccacaattatttct-ttttcgcataaaccattc 13120841  T
Q  198 gttttacccttt 209  Q
     |||| ||||||    
T  13120840 attttccccttt 13120829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 79 - 202
Target Start/End: Original strand, 24556778 - 24556900
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    |||||||| || | |||| |||||||| | |||||| ||||||||||||| | |||||||| ||| |||||||||| |||||||||||||||| |||| |    
T  24556778 acataaatttggtgctattaaaccaccatcaatttgaataatcacttaataagtcaatttgaaaaactatttcatttaaagaatcacaacaattatttct 24556877  T
Q  179 ctcttcgcataaatcattcgtttt 202  Q
     | |||||||||| ||||||||||    
T  24556878 -ttttcgcataaaccattcgtttt 24556900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 22 - 178
Target Start/End: Original strand, 1269475 - 1269622
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttt-tagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    |||||||| ||| |||||||||||  ||||| ||||||||||| || |||||| ||| ||||||||||||| |||| |||||||||  |||||||| |||    
T  1269475 ttttcttttttctgtacacgtttgagttttt-tctagactctaattctcctttctag-acataaatctgatgctatgaaaccacccccaatttgtaaaat 1269572  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
            || |||||||| |||||||||||||| |||||||||||||||||||||||    
T  1269573 --------tagtcaatttgaaaagctatttcattaaaagaatcacaacaatcattttt 1269622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 28189309 - 28189391
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaac 101  Q
    ||||||||||||||||| ||||||||||  ||||| | |||||| ||||| ||||||| |||||||||||||||||||||||||    
T  28189309 atcattttctttcttcaatacacgtttgagttttttt-tagactttagttctcctttttgtacataaatctgatcctatcaaac 28189391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 22386929 - 22386799
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    |||||||| |||| ||||  ||||||| | |||||| | ||||||||||| | |||||||| ||| ||||||||||||||||||||||||||| | | ||    
T  22386929 acataaatttgatgctatttaaccaccatcaatttgaacaatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaattaatatt 22386830  T
Q  179 ctcttcgcataaatcattcgttttacccttt 209  Q
     | || ||||||| |||| ||||| ||||||    
T  22386829 ttttttgcataaaccatttgttttccccttt 22386799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 9777387 - 9777482
Alignment:
Q  81 ataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttc-attgaaagaatcacaacaatcatt 175  Q
    ||||||||||| ||| ||||||||||  ||||| |||||||||| ||| | |||||||| | | ||||||| ||  ||||||||||||||||||||    
T  9777387 ataaatctgatgctaccaaaccacccccaatttatataatcactcaatcagtcaatttgaataactatttcaataaaaagaatcacaacaatcatt 9777482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 20470643 - 20470706
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaat 86  Q
    ||||||||||| ||||||||||||  ||||| ||||||||||| || ||||||| ||||||||||    
T  20470643 ttttctttctttagtacacgtttgagttttt-tctagactctaattatcctttttgtacataaat 20470706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 272
Target Start/End: Original strand, 20470713 - 20470777
Alignment:
Q  209 tttccacaacagagtagtgacaa-tgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |||||||||||||| |||||||| | ||||| |||| |||||||||||||||| ||||| |||||    
T  20470713 tttccacaacagaggagtgacaaatccaaacaacaccgttagataaatttcacctctttcactta 20470777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 3907473 - 3907528
Alignment:
Q  109 aatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatca 164  Q
    |||||||||||||| ||||| | |||||||| |||  |||||||||||||||||||    
T  3907473 aatttgtataatcatttaatcaatcaatttgaaaaattatttcattgaaagaatca 3907528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 202
Target Start/End: Complemental strand, 26486513 - 26486343
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||| |||||| ||||||||| ||  ||||| |||| ||||||||| | ||||  | | |||||| |||| ||||||||||| | | |||||||||||||    
T  26486513 ttttttttctttagtacacgtatgagttttt-tctaaactctagttctactttctggaaataaatttgatgctatcaaaccatcatcaatttgtataatc 26486415  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 202  Q
    ||||        ||| || |||||||||||||||||| ||||| |||||| |||| | | ||||||||||  |||||||||    
T  26486414 actt--------aatctgaaaagctatttcattgaaaaaatcataacaattatttct-ttttcgcataaactattcgtttt 26486343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 31369511 - 31369432
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaat 128  Q
    |||| |||| |||||| || ||||||  | |||||||||||||  |||||||||||  | ||||||||||||||||||||    
T  31369511 ttttttctaaactctaattctcctttctggacataaatctgatgttatcaaaccactttcaatttgtataatcacttaat 31369432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 38263806 - 38263924
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 148  Q
    |||| ||||||||||||||   ||||| | |||||||| |||| |||| |||||||  |  ||||| || || ||||||| | |||||||  ||| ||||    
T  38263806 ttttttctagactctagttccactttttggacataaatttgatgctattaaaccactatcgatttgaattattacttaatcagtcaatttaaaaaactat 38263905  T
Q  149 ttcattgaaagaatcacaa 167  Q
    |||||||| ||||||||||    
T  38263906 ttcattgatagaatcacaa 38263924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 3547730 - 3547674
Alignment:
Q  95 atcaaaccacccttaatttgt-ataatcacttaattactcaatttggaaagctattt 150  Q
    ||||||||||||| ||||||| ||||||||||||||  |||||| | ||||||||||    
T  3547730 atcaaaccaccctcaatttgttataatcacttaattggtcaattcgaaaagctattt 3547674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 32810414 - 32810370
Alignment:
Q  108 taatttgtataatcacttaattactcaatttggaaagctatttca 152  Q
    ||||||| ||||||||||||| | |||||||| ||||||||||||    
T  32810414 taatttgaataatcacttaatcaatcaatttgaaaagctatttca 32810370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 2e-78; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 26151897 - 26151646
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagact-ctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    ||||||||||| |||| |||||||  ||||| |||||||| |||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  26151897 ttttctttctttagtatacgtttgagtttttttctagacttctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataat 26151798  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| |||||||    
T  26151797 cacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttctacaacag 26151699  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  26151698 aggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 26151646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 19367568 - 19367318
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| ||| |||||||||||||| ||||||||||||||    
T  19367568 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggattctatcaaaccacccctaatttgtataatc 19367469  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| |||||||||||||     
T  19367468 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccattcgttttaccc-ttttccacaacagt 19367370  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  19367369 ggagtgacaaattcaaacgacaccgttagataaatttcacctctttcactta 19367318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 25222234 - 25222488
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||| ||||| ||||||| ||||||||||| |||||||||||| ||  | ||||||||||    
T  25222234 atcattttctttctttagtacacgtttgagtttttttctagactttagttctcctttttgtacataaatcggatcctatcaaatcattcctaatttgtat 25222333  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  25222334 aatcacttaattagtcaatttagaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttt-cacaa 25222432  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||| |||||| ||| ||||| |||| |||| ||||||||||||||||| |||||    
T  25222433 cagaggagtgacaaattcaaacaacaccgttatataaatttcacatctttcactta 25222488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 42411706 - 42411457
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  42411706 ttttctttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 42411608  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| |||||||||    
T  42411607 acttaattagtcaatttggaaagctatttcatttaaagaatcacaacaatcattttttacttcgcataaaccattcgttttacccttttt-cacaacaga 42411509  T
Q  222 gtagtg-acaatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | |||| | ||| ||||| |||| ||||||||||||| || ||||| |||||    
T  42411508 ggagtgaaaaatccaaacgacaccgttagataaatttaacctctttcactta 42411457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 18676464 - 18676209
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||| |||| ||||||||||    
T  18676464 atcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaactacccctaatttgtat 18676365  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgttttaccctttttccaca 216  Q
    ||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||| |||||||||||||| |||||||||    
T  18676364 aataacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttctttgcataaaccattcgttttaccc-ttttccaca 18676266  T
Q  217 acagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | |||| |||||| ||| ||||| |||| |||||||||| ||||| ||||| |||||    
T  18676265 aaagaggagtgacaaattcaaacgacaccgttagataaagttcacctctttcactta 18676209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 41096687 - 41096436
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| ||||||| ||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||| ||||| ||||||||||||||    
T  41096687 ttttctttctttagtacacatttgagtttttttctagactctagttctcctttttgtacataaatcagatcctatcaaatcacccctaatttgtataatc 41096588  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    ||||||| | |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||| || |||||||||||||| |||||||||||||    
T  41096587 acttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaatcattttttttcttcgcattaaccattcgttttaccc-ttttccacaacag 41096489  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  41096488 aggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 41096436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 7993548 - 7993798
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| ||||||| ||||  ||||| |||||||||||||| ||||||| ||||||||| | |||||||||||||||||| ||||||||||||||    
T  7993548 ttttctttctttagtacacatttgagttttt-tctagactctagttctcctttttgtacataaaccggatcctatcaaaccacccctaatttgtataatc 7993646  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatc-atttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    ||||||| |  ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| |||||||||||||| |||||||||| ||    
T  7993647 acttaatcagccaatttggaaagctatttcattgaaagaatcacaacaatctttttttttcttcgcataaaccattcgttttaccc-ttttccacaatag 7993745  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || |||||| ||| ||||| |||| |||||||||||||||||||||| |||||    
T  7993746 aggagtgacaaatccaaacgacaccgttagataaatttcacatctttcactta 7993798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 45618892 - 45619141
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagact-ctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    ||||||||||| |||| |||||||  ||||| |||||||| |||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  45618892 ttttctttctttagtatacgtttgagttttt-tctagacttctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataat 45618990  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||| |||||||||||||    
T  45618991 cacttaatcagtcaatttgg-aagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatttgttttaccc-ttttccacaacag 45619088  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  45619089 aggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 45619141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 2063721 - 2063970
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||||||| ||| |||||||  ||||| | |||||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||    
T  2063721 ttttctttcttcggtatacgtttgagttttttt-tagactctagttttcctttttgtacataaatataatcctatcaaaccacccctaatttgtataatc 2063819  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |   |||| ||| ||||||||||| |||||||||||||||||    
T  2063820 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcccgcaaaaaccattcgtttta-cctttttccacaacaga 2063918  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  2063919 ggagtgacaaattcaaacgacaccgttagataaatttcacctctttcactta 2063970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 13020337 - 13020588
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    ||||||||||| ||||||||||||  ||||| | ||||||||||||| || |||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  13020337 ttttctttctttagtacacgtttgagttttttttctagactctagttctcttttttgtacataaatcggatcctatcaaaccacccctaatttgtataat 13020436  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||| ||||||||||| ||||||| ||||||||    
T  13020437 cacttaatcagtcaatttggaaagctatttcatttaaagaatcacaacaataatttttttcttcgcataaaccattcgtttta-ccttttttcacaacag 13020535  T
Q  221 agtagtg-acaatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || |||| | ||| ||||  |||| |||||||||||||||| ||||| |||||    
T  13020536 aggagtgaaaaattcaaatgacaccgttagataaatttcacctctttcactta 13020588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 63 - 272
Target Start/End: Original strand, 4855948 - 4856158
Alignment:
Q  63 tagttttccttttagta-cataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaa 161  Q
    ||||| ||||||| ||| |||||||| |||||||||||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||||||    
T  4855948 tagttctcctttttgtaacataaatcagatcctatcaaaccacccctaatttgtataatcacttaatcagtgaatttggaaagctatttcattgaaagaa 4856047  T
Q  162 tcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcac 260  Q
    ||||||||||||||||| |||||||||||| ||||||||||| || ||||||||||||||| |||||| ||| ||||| ||| |||||||||||||||||    
T  4856048 tcacaacaatcatttttttcttcgcataaaccattcgttttaacc-ttttccacaacagaggagtgacaaatccaaacgacattgttagataaatttcac 4856146  T
Q  261 atcttttactta 272  Q
     ||||| |||||    
T  4856147 ctctttcactta 4856158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 45042299 - 45042543
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 116  Q
    |||||||||||||||||||| |||||||  ||||| | ||||||||||||| | ||||| |||||||||| ||||||||||||||||||| |||||||||    
T  45042299 atcattttctttcttcagtatacgtttgagttttttttctagactctagttcttcttttcgtacataaatttgatcctatcaaaccacccctaatttgta 45042398  T
Q  117 taatcacttaattactcaatttg--gaaag-ctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttcc 213  Q
    |||||||||||| | ||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||  |||||| ||||||    
T  45042399 taatcacttaatcagtcaatttggtgaaagtctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcg--ttaccc-ttttcc 45042495  T
Q  214 acaacagagtagtgac-aatgcaaaccacactgttagataaatttcac 260  Q
    ||||||||| |||||| ||| ||||| ||| |||| ||||||||||||    
T  45042496 acaacagaggagtgacaaattcaaacgacattgttggataaatttcac 45042543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 6530574 - 6530824
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| |||| | ||||   ||||| |||||||||||||| || |||| ||||||||||| ||| |||||||||||||| ||||||||||||||    
T  6530574 ttttctttctttagtagatgtttaagtttttttctagactctagttctcatttttgtacataaatcggatactatcaaaccacccctaatttgtataatc 6530673  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | |||||||| |||| |||||||||||||||||||||||||||||| || |||||||||||| ||||||||||| || | ||||||||||||    
T  6530674 acttaatcagtcaatttgaaaaggtatttcattgaaagaatcacaacaatcattattttcttcgcataaaccattcgttttatcc-tattccacaacaga 6530772  T
Q  222 gtagtgaca-atgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | ||||||| || |||||  |||||||||||||||||||  ||||| |||||    
T  6530773 ggagtgacagattcaaacgtcactgttagataaatttcatctctttcactta 6530824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 22 - 210
Target Start/End: Complemental strand, 34062004 - 34061817
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||||||||||||| ||  ||||| | |||||| ||||| | ||||| ||||||||||||| |||||||||||||||| |||||||||| ||     
T  34062004 ttttctttcttcagtacacgtatgagttttttt-tagactatagttcttctttttgtacataaatctggtcctatcaaaccacccataatttgtatgatt 34061906  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttt 210  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||    
T  34061905 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatccgttttaccctttt 34061817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 42759901 - 42759671
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| | |||||||||||| ||||||| ||||||||||| |||| ||||||||||||| |||||| |||    
T  42759901 atcattttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaatcggatcatatcaaaccacccataatttttat 42759802  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||| |        |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  42759801 aatcagt--------caatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 42759711  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatt 256  Q
     ||||  ||||| ||| ||||| |||| ||||||||||||    
T  42759710 tagaggggtgacaaattcaaacgacaccgttagataaatt 42759671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 12269337 - 12269589
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    |||||||| |||||| ||||||| |||| |||||| | |||||||||||| || |||| | ||||||||| |||||||||||||||||| ||||||||||    
T  12269337 atcattttttttctttagtacacatttgaattttttt-tagactctagttctcttttttgcacataaatcagatcctatcaaaccacccctaatttgtat 12269435  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | |  |||||||||||||||||||| ||| |||||| |||||||||||| ||||| |||||| |||||||||||  |||||||||||     
T  12269436 aatcacttaatcagt-gatttggaaagctatttcattaaaaaaatcaccacaatcatttttttcttcacataaaccattcgtttta-tctttttccacag 12269533  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||| | |||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  12269534 cagaggaatgacaaattcaaacgacaccgttagataaatttcacctctttcactta 12269589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 36481317 - 36481559
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||| ||||  ||| | | ||||||||| || ||||||| ||||||||||  |||||| ||||||||||| ||||||||||    
T  36481317 atcattttctttctt-agtacacatttgagtttcttt-tagactctaattctcctttttgtacataaattggatcctttcaaaccacccctaatttgtat 36481414  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    |||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||    
T  36481415 aatcacttaat----------ggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcattttaccc-ttttccacaa 36481503  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||| |||||| ||| ||||| |||| | |||||||||||||| ||||| |||||    
T  36481504 cagaggagtgacaaatccaaacgacaccggtagataaatttcacctctttcactta 36481559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 18173032 - 18172903
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| |    
T  18173032 acataaatctggtactatcaaaccacccctaatttgtataatcacttaatcactcaatttgaaaagctatttcatcgaaagaatcacaacaatcatttct 18172933  T
Q  179 ctcttcgcataaatcattcgttttacccttt 209  Q
     | ||| |||||| |||||||||| ||||||    
T  18172932 -ttttcacataaaccattcgttttccccttt 18172903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 39081314 - 39081467
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||| |||||||||||||||| ||  ||||| |||||||||||||||| ||||  | |||||||| |||| ||||||||||||| | |||||||||||||    
T  39081314 ttttttttcttcagtacacgtatgagttttt-tctagactctagttttactttctggacataaatttgatgctatcaaaccaccatcaatttgtataatc 39081412  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    ||||||| | |||||||| |||||||||||||||||||||| |||||||| ||||    
T  39081413 acttaatcagtcaatttgaaaagctatttcattgaaagaattacaacaattattt 39081467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 1418832 - 1418978
Alignment:
Q  28 ttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaa 127  Q
    ||||||||||||||| ||  ||||| |||||||||||||| | |||||   |||||| | |||| ||||||||||||| | |||||||||||||||||||    
T  1418832 ttcttcagtacacgtatgagttttt-tctagactctagttctactttttagacataatt-tgatgctatcaaaccaccatcaatttgtataatcacttaa 1418929  T
Q  128 ttactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    | | |||||||| ||||||||||||||||||||||||||||||| ||||    
T  1418930 tcagtcaatttgtaaagctatttcattgaaagaatcacaacaattattt 1418978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 209
Target Start/End: Original strand, 15457472 - 15457602
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    ||||||||||| | ||||||||| ||||  |||||||||||||||||||| | |||||||| |||||||||| |||||||||||||||||||| ||||||    
T  15457472 acataaatctggtactatcaaactacccccaatttgtataatcacttaatcagtcaatttgaaaagctattttattgaaagaatcacaacaataattttt 15457571  T
Q  179 ctcttcgcataaatcattcgttttacccttt 209  Q
     | ||| || ||| |||||||||| ||||||    
T  15457572 tttttcacacaaaccattcgttttccccttt 15457602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 36060027 - 36059863
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 148  Q
    |||| |||||||||||||| | |||||   ||| |||| |||| ||||||||||||| | |||||||||||||||||||| | | |||||  ||||||||    
T  36060027 ttttttctagactctagttctactttttagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagttaatttaaaaagctat 36059928  T
Q  149 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccac 215  Q
    ||||||||||||| |||||||||||||| | | || ||||||| |||||||||| ||||||| ||||    
T  36059927 ttcattgaaagaaccacaacaatcatttct-tttttgcataaaccattcgtttt-cccttttcccac 36059863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 79 - 231
Target Start/End: Complemental strand, 38985801 - 38985651
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    |||||||| || | |||||||||||||   |||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||||| |    
T  38985801 acataaatttggtactatcaaaccacctccaatttgtataatcatttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaatcatttct 38985702  T
Q  179 ctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgacaa 231  Q
     | ||| |||||| |||| ||||| ||| ||||||||||| ||  ||||||||    
T  38985701 -ttttcacataaaacatttgtttt-ccccttttccacaacggataagtgacaa 38985651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 202
Target Start/End: Original strand, 13997262 - 13997408
Alignment:
Q  55 ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcatt 154  Q
    ||||||||||||||  ||||  | |||||||| |||| ||||  ||||||| | |||||| ||||||||||||| | |||||||| ||| ||||||||||    
T  13997262 ctagactctagtttcactttctggacataaatttgatgctattgaaccaccgtcaatttgaataatcacttaatgagtcaatttgaaaaactatttcatt 13997361  T
Q  155 gaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 202  Q
    ||||||||||||||||| |||| | | |||||||||| ||||||||||    
T  13997362 gaaagaatcacaacaattatttct-ttttcgcataaaccattcgtttt 13997408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 18916146 - 18916049
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    ||||||||||| | ||||||||||| ||  |||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||| |||||||||    
T  18916146 acataaatctggtactatcaaaccatccccaatttgtataatcacttaatcaatcaatttgaaaagctatttcactgaaagaatcacagcaatcattt 18916049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 21747322 - 21747193
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    ||||||||||| | ||||||||||||||  |||||||||||||||||||| | |||||||  ||  |||| |||||||||||||||||||||| |||| |    
T  21747322 acataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaatttaaaatactatgtcattgaaagaatcacaacaataatttct 21747223  T
Q  179 ctcttcgcataaatcattcgttttacccttt 209  Q
     | ||| |||||| |||||||||| ||||||    
T  21747222 -ttttcacataaaccattcgtttttcccttt 21747193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 1226408 - 1226236
Alignment:
Q  27 tttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcactta 126  Q
    ||||||| |||||||||||  ||||| ||||||||||| || ||||||  | ||||||||||||| ||| ||||||||||| ||||| |||||||||| |    
T  1226408 tttcttcggtacacgtttgagttttt-tctagactctaattctccttt--ggacataaatctgatgctaccaaaccaccctcaatttatataatcactca 1226312  T
Q  127 attactcaatttggaaagctatttc-attgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 202  Q
    || |  ||||||| |||| |||||| ||  ||||||||||||||||||||| | | |||||||||| |||| |||||    
T  1226311 atcagacaatttgaaaagttatttcaataaaaagaatcacaacaatcatttct-ttttcgcataaaccatttgtttt 1226236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 27302602 - 27302498
Alignment:
Q  97 caaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcatt 196  Q
    |||| |||||| ||||||||||||||||||||   |||||||| |||||||| ||||| ||||||||||||||||||||| | | |||||||||| ||||    
T  27302602 caaatcaccctcaatttgtataatcacttaatcggtcaatttgaaaagctatatcattaaaagaatcacaacaatcatttat-ttttcgcataaaccatt 27302504  T
Q  197 cgtttt 202  Q
    | ||||    
T  27302503 catttt 27302498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 17 - 260
Target Start/End: Complemental strand, 31273318 - 31273078
Alignment:
Q  17 catcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 116  Q
    |||||||||||||||| |||| || ||||  ||||| | || |||| || | ||||||  | || ||||| ||||  |||||||||||||  ||||||||    
T  31273318 catcattttctttctttagtatacatttgagttttt-tgtatactccagctctcctttctggacttaaatttgatgttatcaaaccacccc-aatttgta 31273221  T
Q  117 taatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccaca 216  Q
    |||||| ||||| | |||||||||||  |||||||||| ||||||||| |||| |||||| | | |||||||||| |||| ||||| | | ||| |||||    
T  31273220 taatcatttaatcagtcaatttggaatactatttcattaaaagaatcataacattcatttct-ttttcgcataaaccatttgtttttctc-tttcccaca 31273123  T
Q  217 acagagtagtgac-aatgcaaaccacactgttagataaatttcac 260  Q
    |||||  |||||| ||| ||||| |||| ||||| ||||||||||    
T  31273122 acagaaaagtgacaaatccaaacgacacagttaggtaaatttcac 31273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 17117729 - 17117608
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    ||||||||||| | ||||||||||||||  |||||||||||||| |        ||||||| |||||||||||||||||||||||||||||||||||| |    
T  17117729 acataaatctggtactatcaaaccacccccaatttgtataatcagt--------caatttgaaaagctatttcattgaaagaatcacaacaatcatttct 17117638  T
Q  179 ctcttcgcataaatcattcgttttacccttt 209  Q
     | |||  ||||| |||||||||| ||||||    
T  17117637 -ttttcatataaaccattcgttttccccttt 17117608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 109 - 209
Target Start/End: Original strand, 38599404 - 38599502
Alignment:
Q  109 aatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctt 208  Q
    |||||||||||||||||||| | |||||||| ||| |||||||||||||||||||| |||||| |||| | | ||  |||||| |||||||||| |||||    
T  38599404 aatttgtataatcacttaatcaatcaatttgaaaaactatttcattgaaagaatcaaaacaattatttatttttt--cataaaccattcgttttcccctt 38599501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 22 - 178
Target Start/End: Original strand, 13001560 - 13001708
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||| ||| ||| ||||||  | |||| |||| |||||| || |||||||  ||||||||| |||| ||||||||||||||  ||||||||         
T  13001560 ttttcttttttcggtatacgttttgagttttttctaaactctaattctcctttttatacataaatttgatgctatcaaaccacccccaatttgta----- 13001654  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
       |||||| |||||||  |||||||||||||| |||||||||||| ||||||||||    
T  13001655 ---taattagtcaatttataaagctatttcattaaaagaatcacaataatcattttt 13001708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 29480729 - 29480600
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    |||||||| |||| |||| |||||||| | |||||| |||| |||||| | | |||||||| |||  |||||||||||||||||||||||||| |||| |    
T  29480729 acataaatttgatgctattaaaccaccatcaatttgaataaacacttattcagtcaatttgaaaaattatttcattgaaagaatcacaacaattatttct 29480630  T
Q  179 ctcttcgcataaatcattcgttttacccttt 209  Q
     | |||||||||| |||| || || ||||||    
T  29480629 -ttttcgcataaaccatttgtcttccccttt 29480600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 9029622 - 9029675
Alignment:
Q  125 taattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    |||||| ||||||| ||||| ||||||||| ||||||||||||  |||||||||    
T  9029622 taattagtcaatttagaaagttatttcattaaaagaatcacaagtatcattttt 9029675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 6e-78; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 23164720 - 23164471
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||| |||||||||||||||  ||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  23164720 ttttcttttttcagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatctgatcctatcaaaccacccctaatttgtataatc 23164622  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||||| | |||||||||||  ||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  23164621 acttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaataatttttttcttcgcataaaccattcgtttta-cctttttccacaacaga 23164523  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | |||||| ||| ||||| |||| ||| |||||||||||| ||||| |||||    
T  23164522 ggagtgacaaatccaaacgacaccgttggataaatttcacctctttcactta 23164471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 28132888 - 28132635
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||| ||||   |||| |||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  28132888 atcattttctttctttagtacacatttgagattttttctagactctagttctcctttttgtacataaatcagatcctatcaaatcacccttaatttgtat 28132789  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| || ||||||||||    
T  28132788 aatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttt-tcttcgcataaaccattcgtttta-ccattttccacaa 28132691  T
Q  218 cagagtagtgacaa-tgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||| |||||||| | ||||| || | |||||||||||||||| ||||| |||||    
T  28132690 cagaggagtgacaagttcaaacgacgccgttagataaatttcacctctttcactta 28132635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 29387907 - 29387653
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| | |||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  29387907 atcattttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtat 29387808  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||||    
T  29387807 aatcacttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttctacaa 29387709  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
     |||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  29387708 tagaggagtgacaaatccaaacaacaccgttagataaatttcacctctttcactta 29387653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 20 - 272
Target Start/End: Complemental strand, 46791848 - 46791596
Alignment:
Q  20 cattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 119  Q
    ||||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||  ||||||||||||    
T  46791848 cattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtataa 46791749  T
Q  120 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 219  Q
    ||||||||| | |||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||||  || |||| ||||||||||||    
T  46791748 tcacttaatcagtcaatttggaaaactatttcattgcaagaatcacaacaatcatttttttcttcgcataaaccattcacttgaccc-ttttccacaaca 46791650  T
Q  220 gagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  46791649 gaggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 46791596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 27 - 272
Target Start/End: Complemental strand, 21784927 - 21784682
Alignment:
Q  27 tttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcactta 126  Q
    |||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  21784927 tttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcactta 21784829  T
Q  127 attactcaatttggaaagctatttcattgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgttttaccctttttccacaacagagtag 225  Q
    || | | ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||||| ||    
T  21784828 atcagttaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgttttaccc-ttttccacaacagaggag 21784730  T
Q  226 tgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |||| ||| ||||| || | |||||||||||||||| ||||| |||||    
T  21784729 tgacaaatccaaacgacgccgttagataaatttcacctctttcactta 21784682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 52655278 - 52655022
Alignment:
Q  18 atcattttctttcttcagtacac--gtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgt 115  Q
    ||||||||||||||| |||||||  |||||  ||||| |||||||||||||| ||||||| ||| ||||||| |||||||||||||||||  ||||||||    
T  52655278 atcattttctttctttagtacacacgtttgagtttttctctagactctagttctcctttttgtatataaatcggatcctatcaaaccaccactaatttgt 52655179  T
Q  116 ataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccac 215  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||| ||||||||    
T  52655178 ataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcctcgcataaaccattcgttttaccc-ttttccac 52655080  T
Q  216 aacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |||| || |||||| ||| ||||| | || |||||||||||||||| ||||| |||||    
T  52655079 aacataggagtgacaaattcaaacgataccgttagataaatttcacctctttcactta 52655022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 8364087 - 8364338
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| ||||||||||||  ||||| |||||||||| ||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  8364087 ttttctttctttagtacacgtttgagtttttttctagactcttgttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 8364186  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca-tttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    ||||||| | ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| ||| |||| ||||||||| |||||||||||||    
T  8364187 acttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcattttttttcttcgcacaaaccatttgttttaccc-ttttccacaacag 8364285  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || || ||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  8364286 aggagagacaaatccaaacgacaccgttagataaatttcacctctttcactta 8364338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 27729922 - 27729668
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||| | ||||||||||||  ||||| | |||||||||||| ||||||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  27729922 atcattttctttcattagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcttatcaaaccacccctaatttgtat 27729823  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    |||||| |||| | |||||||||||||| |||| || ||||||||||||||||||||| || |||||||||||| ||||||||||||||||||| |||||    
T  27729822 aatcacataatcaatcaatttggaaagcaatttgatcgaaagaatcacaacaatcattattttcttcgcataaaccattcgttttacccttttt-cacaa 27729724  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || || |||||| ||| ||||| ||||||||||||||||||||| ||||| |||||    
T  27729723 catagaagtgacaaatccaaacgacactgttagataaatttcacctctttcactta 27729668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 18408103 - 18408356
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||| ||||| || |||| ||||||||||| |||||||||||||||||| ||||||||||    
T  18408103 atcattttctttctttagtacacgtttgagttttt-tctagactttagttctcatttttgtacataaatcggatcctatcaaaccacccctaatttgtat 18408201  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | |||||||| ||||||| | |||||||||||||||||||||||||||| | ||||||||||  ||||||||||||| ||||||||||    
T  18408202 aatcacttaatcagtcaatttgaaaagctaatccattgaaagaatcacaacaatcattttttttttcgcataaacaattcgttttaccc-ttttccacaa 18408300  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||| |||||| ||| ||||| |||| ||| |||||||||||| ||||| |||||    
T  18408301 cagagcagtgacaaatccaaacgacaccgtttgataaatttcacctctttcactta 18408356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 24252534 - 24252785
Alignment:
Q  22 ttttctttcttcagtacacgtttg--tatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 119  Q
    ||||||||||| ||||||||||||  | ||||| |||||||||||||| | ||||| |||||||| || |||||||||||||||||||||||||||||||    
T  24252534 ttttctttctttagtacacgtttgagtttttttttctagactctagttcttctttttgtacataa-tcagatcctatcaaaccacccttaatttgtataa 24252632  T
Q  120 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 219  Q
    ||||||||| | ||||||||||||| ||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  24252633 tcacttaatcagtcaatttggaaagttatttcagtgcaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaaca 24252731  T
Q  220 gagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||  |||||| ||| ||||| || | |||||||||||||||| ||||| |||||    
T  24252732 gatgagtgacaaatccaaacgaccccgttagataaatttcacctctttcactta 24252785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 25599236 - 25598986
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtct-agactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    |||||||||||||||||| |||||  ||||| | | ||||||||||| ||||||| ||||||||||||||| |||||||||||||  |||||| ||||||    
T  25599236 ttttctttcttcagtacaggtttgagttttttttttagactctagttctcctttttgtacataaatctgattctatcaaaccacctctaatttatataat 25599137  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    |||||||| | |||||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||| |||||||||||||    
T  25599136 cacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaatcatgttt-tcttcgcataaaccattcgttttaccc-ttttccacaacag 25599039  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  25599038 aggagtgacaaattcaaacgacaccgttagataaatttcacctctttcactta 25598986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 41707204 - 41706963
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||| ||||||    
T  41707204 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgcataatc 41707105  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat---ttttctcttcgcataaatcattcgttttaccctttttccacaac 218  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||||||||||   |||| |||||||||||| |||||| |||||||||||| |||| |    
T  41707104 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttttcttcgcataaaccattcgctttacccttttt-cacacc 41707006  T
Q  219 agagtagtgac-aatgcaaaccacactgttagataaatttcac 260  Q
    |||| |||||| ||| ||||| |||  ||||||||||||||||    
T  41707005 agaggagtgacaaatccaaacgacaacgttagataaatttcac 41706963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 51939704 - 51939454
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| ||| ||||||||  ||||| |||||||||||||| || |||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  51939704 ttttctttctttagtccacgtttgagttttt-tctagactctagttctcttttttgtacataaatcagatcctatcaaaccacccctaatttgtataatc 51939606  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    ||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||||||||||||| ||||||||||||     
T  51939605 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttcttcacataaaccattcgttttaccc-ttttccacaacat 51939507  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || |||||| ||| ||||| |||| ||| | |||||||||| ||||| |||||    
T  51939506 agaagtgacaaatccaaacgacacagttggttaaatttcacctctttcactta 51939454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 23067879 - 23067623
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 116  Q
    ||||||||||||||| ||||||||||||  ||||| | ||||||| ||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  23067879 atcattttctttctttagtacacgtttgagttttttttctagactttagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgta 23067780  T
Q  117 taatcacttaattactcaatttggaaagctatttcattgaaagaatcaca-acaatcatttttctcttcgcataaatcattcgttttaccctttttccac 215  Q
    ||||||||| |  | |||||||| |||| ||||||||| ||||||||||| ||||||||||||   |||||||||| |||| ||||||||| ||||||||    
T  23067779 taatcacttcaccagtcaatttgaaaagttatttcatttaaagaatcacacacaatcattttttaattcgcataaaccatttgttttaccc-ttttccac 23067681  T
Q  216 aacagagtagtg-acaatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||||| |||| | ||| ||||  |||| |||||||||||||||| ||||| |||||    
T  23067680 aacagaggagtgaaaaatccaaatgacaccgttagataaatttcacctctttcactta 23067623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 54430468 - 54430663
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||| ||| |||||||||||  ||||| ||||| |||||||| ||||||| |||||||||||||||  ||||||||||||| ||||||||||||||    
T  54430468 ttttcttttttcggtacacgtttgagttttt-tctaggctctagttctcctttttgtacataaatctgatgttatcaaaccacccctaatttgtataatc 54430566  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 219  Q
    ||||||| | |||||||| |||| ||||||||| |||||||  |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  54430567 acttaatcagtcaatttgaaaagttatttcattaaaagaattgcaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaaca 54430663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 48 - 266
Target Start/End: Original strand, 13401400 - 13401619
Alignment:
Q  48 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 147  Q
    ||||| |||| ||||||||| ||||||| ||||||| ||  |||||||||||||||| ||||||||||||||||||||||| | |||||||| |||||||    
T  13401400 tttttttctaaactctagttctcctttttgtacatacattcgatcctatcaaaccactcttaatttgtataatcacttaatcagtcaatttgaaaagcta 13401499  T
Q  148 tttcattgaaagaatcacaacaatcatttttctct-tcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactg 245  Q
    |||||||| |||||||||||||||||||||| | |  |||||||| |||| ||||||||| ||||||||||||||| |||| | ||| ||||| |||| |    
T  13401500 tttcattggaagaatcacaacaatcatttttttttcccgcataaaccatttgttttaccc-ttttccacaacagaggagtgccaaattcaaacgacaccg 13401598  T
Q  246 ttagataaatttcacatcttt 266  Q
    | ||||||||||||| |||||    
T  13401599 taagataaatttcacctcttt 13401619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 36 - 272
Target Start/End: Original strand, 6715379 - 6715604
Alignment:
Q  36 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 135  Q
    |||||||||| |||||| |||||||||||||| ||||||| ||| ||||||| |||||||||||||||||  |||||||||          || | ||||    
T  6715379 tacacgtttg-atttttttctagactctagttctcctttttgtatataaatcggatcctatcaaaccacctataatttgta----------atcagtcaa 6715467  T
Q  136 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgc 234  Q
    ||| ||||| ||||||||||||||||||| ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||| |||||| ||| |    
T  6715468 ttttgaaagttatttcattgaaagaatcataacaatcattttttt-ttcgcataaaccattcgttttaccctttttccacaacagaggagtgacaaatcc 6715566  T
Q  235 aaaccacactgttagataaatttcacatcttttactta 272  Q
    |||| ||||  ||| ||||||||||| ||||| |||||    
T  6715567 aaacgacaccattatataaatttcacctctttcactta 6715604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 49 - 209
Target Start/End: Complemental strand, 36538308 - 36538149
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 148  Q
    |||| |||| ||||||||| | ||||  | |||||||  |||| ||||||||||||| | |||||||||||||||||||| | |||||||| ||| ||||    
T  36538308 ttttttctaaactctagttatactttatggacataaacttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactat 36538209  T
Q  149 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    ||||||||||||||||||||||| |||| | | |||||||||| |||||||||| ||||||    
T  36538208 ttcattgaaagaatcacaacaattatttct-ttttcgcataaaccattcgttttccccttt 36538149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 272
Target Start/End: Original strand, 20762052 - 20762214
Alignment:
Q  110 atttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    |||||||||||||||| || | | |||||||||  |||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||| ||    
T  20762052 atttgtataatcacttgatcagttaatttggaagtctatttcattgaaagaatcataacaatcatttttttcgtcgcataaaccattcgttttaccc-tt 20762150  T
Q  210 ttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |||||||| |||| |||||| ||| ||||| | || |||  ||||||||||| ||||| |||||    
T  20762151 ttccacaatagaggagtgacaaatacaaacgataccgttgaataaatttcacctctttcactta 20762214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 7767004 - 7767134
Alignment:
Q  48 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 147  Q
    ||||| ||||||||| |||| | ||||  | |||||||| |||| ||||||||| ||| | |||||||||||||||||||| | |||||||| |||||||    
T  7767004 tttttttctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagcta 7767103  T
Q  148 tttcattgaaagaatcacaacaatcattttt 178  Q
    |||||||||||||||||||||||| ||||||    
T  7767104 tttcattgaaagaatcacaacaattattttt 7767134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 27303103 - 27303256
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||| ||||||||| |||||| ||| ||||| ||||||||||| || | ||||  | |||||||| |||| | || |||||||| | |||||||||||||    
T  27303103 ttttttttcttcaggacacgtatgtgttttt-tctagactctacttctactttatggacataaatttgatgccatgaaaccaccatcaatttgtataatc 27303201  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||||||| ||||    
T  27303202 acttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaattattt 27303256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 21596265 - 21596404
Alignment:
Q  36 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 135  Q
    ||||||||||  ||||| ||||||||||| || ||||||  | ||||||||| ||| |||||||||||| |  |||||||||||||||||||| | || |    
T  21596265 tacacgtttgcgttttt-tctagactctaattctcctttctggacataaatcagatgctatcaaaccactcccaatttgtataatcacttaatcagtcga 21596363  T
Q  136 tttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  21596364 tttggaaagctatttcattacaagaatcacaacaatcattt 21596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 42009354 - 42009225
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    |||||||| |||| ||||||||||||| | |||||||||||||||||||| | |||||||  |||| |||||||||||||||||||||||||| |||| |    
T  42009354 acataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaattatttct 42009255  T
Q  179 ctcttcgcataaatcattcgttttacccttt 209  Q
     | ||| |||||| |||||||||| ||||||    
T  42009254 -ttttcacataaaccattcgttttccccttt 42009225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 79 - 202
Target Start/End: Complemental strand, 48627121 - 48626999
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    ||||||||||||| |||||| ||||||   ||||||||||||||||| || | |||||||| ||| |||||||||||||||||||||||||||||||| |    
T  48627121 acataaatctgatactatcagaccaccgccaatttgtataatcacttgatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatcatttat 48627022  T
Q  179 ctcttcgcataaatcattcgtttt 202  Q
     | ||| |||||| ||||||||||    
T  48627021 -ttttcacataaaccattcgtttt 48626999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 202
Target Start/End: Complemental strand, 19965992 - 19965850
Alignment:
Q  59 actctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaa 158  Q
    |||||| || ||||||| | ||||||||||||| ||||||||||||    |||||||||||||||||||||| | || ||| |||||||||||||| |||    
T  19965992 actctaattctcctttttggacataaatctgatgctatcaaaccactgccaatttgtataatcacttaattagttaaattgaaaagctatttcattaaaa 19965893  T
Q  159 gaatcac-aacaatcatttttctcttcgcataaatcattcgtttt 202  Q
    ||||||| |||||||||||||  |  |||||||| ||||||||||    
T  19965892 gaatcacaaacaatcattttttcc--cgcataaaccattcgtttt 19965850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 164 - 272
Target Start/End: Complemental strand, 27110879 - 27110771
Alignment:
Q  164 acaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacat 262  Q
    |||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||| |||||| ||| ||||| |||| |||||||||||||||| |    
T  27110879 acaacaatcattttttccttcgcataaaccattcgttttaccc-ttttccacaacagaggagtgacaaattcaaacgacaccgttagataaatttcacct 27110781  T
Q  263 cttttactta 272  Q
    |||| |||||    
T  27110780 ctttcactta 27110771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 1255142 - 1255015
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    ||||||||||||| ||||||||| ||| |||||||||||||| |||||||   ||||||| ||||| |||||||||||||||||  ||||||| |||| |    
T  1255142 acataaatctgatgctatcaaacgacctttaatttgtataatgacttaatcggtcaatttagaaagttatttcattgaaagaat--caacaataatttgt 1255045  T
Q  179 ctcttcgcataaatcattcgttttacccttt 209  Q
     | |||||||||| |||||||||| ||||||    
T  1255044 -ttttcgcataaaccattcgttttccccttt 1255015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 94 - 209
Target Start/End: Complemental strand, 50677391 - 50677277
Alignment:
Q  94 tatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatc 193  Q
    |||||||||||| | |||||||||||||||||||| | |||||||| ||| |||||||||||||| |||||||||||| |||| | | ||||||||||      
T  50677391 tatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaacaatcacaacaattatttct-ttttcgcataaaca 50677293  T
Q  194 attcgttttacccttt 209  Q
    ||||||||| ||||||    
T  50677292 attcgttttccccttt 50677277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 46904714 - 46904811
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    ||||| || |||| ||||||||||||| | |||||||||||||||||||| | |||||||  ||| ||||||||||||||||||||||||||| ||||    
T  46904714 acatagatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaaactatttcattgaaagaatcacaacaattattt 46904811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 257
Target Start/End: Original strand, 51146879 - 51147085
Alignment:
Q  48 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 147  Q
    ||||| |||||| |||||||   ||||| | |||||||| |||| |||| |||||||| | |||||| ||| ||||||||| | |||||||  ||| |||    
T  51146879 tttttttctagattctagttccactttttggacataaatttgatgctattaaaccaccatcaatttgaata-tcacttaatcagtcaatttaaaaaacta 51146977  T
Q  148 tttcattgaaagaatcacaacaatca-tttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgacaatgcaaaccacactgt 246  Q
    ||| |||||||||||||||||||| | |||||||| ||||||||| ||||||||||  || ||||| || ||| || ||||||| | ||||| |||| ||    
T  51146978 ttttattgaaagaatcacaacaattattttttctc-tcgcataaaccattcgtttt--cccttttctacgacatagaagtgacattccaaacgacaccgt 51147074  T
Q  247 tagataaattt 257  Q
    ||| |||||||    
T  51147075 taggtaaattt 51147085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 15987207 - 15987322
Alignment:
Q  114 gtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttcc 213  Q
    ||||||||||||||| | ||||||| ||||| ||||||||| ||||||| ||||| ||||||| | | |||||||||| |||||||||| ||| ||| ||    
T  15987207 gtataatcacttaatcattcaatttcgaaagttatttcattaaaagaattacaactatcatttat-ttttcgcataaaccattcgtttttccc-tttccc 15987304  T
Q  214 acaacagagtagtgacaa 231  Q
    ||||| ||| ||||||||    
T  15987305 acaacggaggagtgacaa 15987322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 40152278 - 40152124
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagtt-ttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    |||| ||||||| |||||||||||  ||||| | ||||||||| || ||| |||||| ||||| ||||||| ||| |||| || ||  ||||||||||||    
T  40152278 ttttttttcttcggtacacgtttgagttttttt-tagactctaattcttctttttag-acatagatctgatgctaccaaatcatccccaatttgtataat 40152181  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaa-gaatcacaacaatcattt 176  Q
    ||||||||   |||||||| ||| |||||||||| ||| ||||||||||||||||||    
T  40152180 cacttaatcggtcaatttgaaaaactatttcattaaaacgaatcacaacaatcattt 40152124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 1649923 - 1649829
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca 173  Q
    ||||||||||| | |||||||| |||||  |||||||||||||||||||| | |||||||| ||| |||||||| ||||||  || |||||||||    
T  1649923 acataaatctggtgctatcaaatcacccccaatttgtataatcacttaatcattcaatttgaaaatctatttcactgaaagcttcgcaacaatca 1649829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 27110956 - 27110882
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctat 96  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| || |||| |||||||||||  |||||||    
T  27110956 ttttctttctttagtacacgtttgagtttttttctagactctagttctcatttttgtacataaatcgtatcctat 27110882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 43905935 - 43905862
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttca 152  Q
    ||||||||||| | ||||||||| ||||| |||||||||||||||| ||| | |||||||| |||| |||||||    
T  43905935 acataaatctggtactatcaaactaccctcaatttgtataatcactcaatcagtcaatttgaaaagttatttca 43905862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 4207430 - 4207357
Alignment:
Q  93 ctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatc 172  Q
    ||||||||||| ||  |||||||||||||||||||| | ||||||||||||| ||||||    |||||||||||||||||    
T  4207430 ctatcaaaccatcc--aatttgtataatcacttaatcattcaatttggaaagatatttc----aaagaatcacaacaatc 4207357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 2e-77; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 23 - 272
Target Start/End: Original strand, 33909980 - 33910229
Alignment:
Q  23 tttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatca 122  Q
    ||||||||||| |||||||||||  ||||| |||||||||||||| ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||     
T  33909980 tttctttcttcggtacacgtttgagtttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatttgtataatcg 33910079  T
Q  123 cttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagag 222  Q
    |||||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||    
T  33910080 cttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaacagag 33910178  T
Q  223 tagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
     | | || ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  33910179 gaattacaaatccaaacgacaccgttagataaatttcacctctttcactta 33910229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 6380238 - 6379983
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 116  Q
    |||||||| |||||| ||||||||||||  ||||| | ||||||||||||| | ||||| |||||| ||||||||||||||||||||||| |||||||||    
T  6380238 atcattttatttctttagtacacgtttgagttttttttctagactctagttcttctttttgtacatgaatctgatcctatcaaaccacccctaatttgta 6380139  T
Q  117 taatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccaca 216  Q
    |||||||||||| | |||||||||||  |||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||| |||||||||    
T  6380138 taatcacttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaatcatatttttcttcgcataaaccattcgttttaccc-ttttccaca 6380040  T
Q  217 acagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |||||| |||||| ||| ||||| ||| |||| |||||||||||| ||||| |||||    
T  6380039 acagaggagtgacaaatccaaacgacattgttggataaatttcacctctttcactta 6379983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 11672495 - 11672751
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacata--aatctgatcctatcaaaccacccttaatttgt 115  Q
    ||||||||||||||| ||||||| ||||  ||||| |||||||||||||| ||||||| |||||||  |||| |||||||||||||||| | ||||||||    
T  11672495 atcattttctttctttagtacacatttgagtttttttctagactctagttctcctttttgtacatataaatcggatcctatcaaaccactcctaatttgt 11672594  T
Q  116 ataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccac 215  Q
    ||||||||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||    
T  11672595 ataatcacttaatcagtcaatttggaaagttatttcaatgaaagaatcacaacaatcatttttttcttcgcataaatcattcgttttactc-ttttccac 11672693  T
Q  216 aacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||||| |||||| |||  |||| |||  ||| |||||||||||| ||||| |||||    
T  11672694 aacagaggagtgacaaatctaaacgacatcgtttgataaatttcacctctttcactta 11672751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 18015730 - 18015479
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| |||||| |||||  ||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  18015730 ttttctttctttagtacatgtttgagttttt-tctagactctagttttcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 18015632  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca--tttttctcttcgcataaatcattcgttttaccctttttccacaaca 219  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||| || |||||||||||||| |||| |||||||    
T  18015631 acttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaattatttttttttcttcgcattaaccattcgttttaccc-ttttacacaaca 18015533  T
Q  220 gagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||  |||||| ||| ||||| |||| ||| |||||||||||| ||||| |||||    
T  18015532 gaaaagtgacaaattcaaacgacaccgtttgataaatttcacctctttcactta 18015479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 23 - 272
Target Start/End: Complemental strand, 36796520 - 36796270
Alignment:
Q  23 tttctttcttcagtacacgtttgtatttttgtctagact-ctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||||| ||||||||||||  ||||| |||||||| |||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||||||||     
T  36796520 tttctttctttagtacacgtttgagttttt-tctagacttctagttctcctttttgtacataaatcggatcctatcaaactacccttaatttgtataata 36796422  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    ||||||| | ||||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| |||||||||||||    
T  36796421 acttaatcagtcaatttggaaaattatttcattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgttttaccc-ttttccacaacag 36796323  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || |||||| |||  |||| |||| |||||||||||||||| ||||| |||||    
T  36796322 aggagtgacaaatcaaaacgacaccgttagataaatttcacctctttcactta 36796270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 33419267 - 33419016
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||| | ||||||||||  ||||| |||||||||||||| |  |||| ||||||||||| ||||||||||||| |||| ||||||||||||||    
T  33419267 ttttctttctttaatacacgtttgagtttttttctagactctagttcttgtttttgtacataaatcggatcctatcaaactacccctaatttgtataatc 33419168  T
Q  122 acttaatt-actcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    |||||||| | |||||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| || ||||| |||||||    
T  33419167 acttaattaagtcaatttgaaaagttatttcattgaaagaatcacaataatcatttttttcttcgcataaaccattcgtttta-ccattttctacaacag 33419069  T
Q  221 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  33419068 aggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 33419016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 42161275 - 42161021
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctat--caaaccacccttaatttgt 115  Q
    ||||||||||||||| ||||||||||||  ||||| ||||||||||| || || |||| ||||||||||  ||||||||  |||||||||| ||||||||    
T  42161275 atcattttctttctttagtacacgtttgagtttttttctagactctaattctcatttttgtacataaattggatcctatatcaaaccacccctaatttgt 42161176  T
Q  116 ataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccac 215  Q
    |||||||||| || | | ||||||||||||||||||||||||||||||||| |||  |||||  |||||||||||| ||||||||||| |||||||||||    
T  42161175 ataatcacttgatcagttaatttggaaagctatttcattgaaagaatcacagcaacaatttt--tcttcgcataaaccattcgtttta-cctttttccac 42161079  T
Q  216 aacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  42161078 aacagaggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 42161021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 34 - 272
Target Start/End: Complemental strand, 44894166 - 44893928
Alignment:
Q  34 agtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactc 133  Q
    ||||||||||||  ||||| |||||||| ||||| | ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||| | ||    
T  44894166 agtacacgtttgagtttttttctagactatagttcttctttttgtacataaatcggatcctattaaaccacccctaatttgtataatcacttaatcaatc 44894067  T
Q  134 aatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aat 232  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| |||||||||||||| ||||||||| || || ||| || |||    
T  44894066 aatttggaaagctattttattgaaagaatcacaacaatcatttttttcttcacataaaccattcgttttaccc-ttttccacagcaaaggagttacaaat 44893968  T
Q  233 gcaaaccacactgttagataaatttcacatcttttactta 272  Q
     ||||| |||| |||| ||||||||||| ||||| |||||    
T  44893967 tcaaacgacaccgttacataaatttcacctctttcactta 44893928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 46221856 - 46221654
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| |||| |||||||  ||||| |||||||||||||| || |||| |||||||||||  |||||||||||| |||| |||||||||     
T  46221856 atcattttctttctttagtatacgtttgagtttttttctagactctagttctcttttttgtacataaatcgaatcctatcaaactacccctaatttgtag 46221757  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| || ||||||||||    
T  46221756 aatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttattcgcataaaccattcgtttta-ccattttccacaa 46221658  T
Q  218 caga 221  Q
    ||||    
T  46221657 caga 46221654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 4099883 - 4100092
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    ||||||||||| ||||||||||||  ||||| | |||||| ||| || ||||||| ||||||||||| |||| ||||||||||||| |||||||||||||    
T  4099883 ttttctttctttagtacacgtttgagttttttttctagacgctaattctcctttttgtacataaatcggatc-tatcaaaccacccctaatttgtataat 4099981  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 220  Q
    |||||||| | |||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||||||||||  || |||||||||||||    
T  4099982 cacttaatcaatcaatttgaaaagctatttcattgaaagaattacaacaatcatttttttcttcgcaaaaaccattcgtttttacccttttccacaacag 4100081  T
Q  221 agtagtgacaa 231  Q
    || ||||||||    
T  4100082 aggagtgacaa 4100092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 94 - 272
Target Start/End: Complemental strand, 12251365 - 12251187
Alignment:
Q  94 tatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatc 193  Q
    ||||||||||||| |||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  12251365 tatcaaaccacccctaatttctataatcatttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaacc 12251266  T
Q  194 attcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||||||||||| ||||||||||||||| |||||| ||| |||||  ||| |||||||||||||||| ||||| |||||    
T  12251265 attcgttttaccc-ttttccacaacagaggagtgacaaatccaaacgtcaccgttagataaatttcacctctttcactta 12251187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 54 - 260
Target Start/End: Complemental strand, 7636443 - 7636236
Alignment:
Q  54 tctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcat 153  Q
    ||||||||||| || ||| ||| |||||||| ||||||||||||||||||||| ||||||||||||| ||||||| | |||||||| |||||||||||||    
T  7636443 tctagactctacttctcccttttgtacataactctgatcctatcaaaccacccctaatttgtataattacttaatcagtcaatttgaaaagctatttcat 7636344  T
Q  154 tgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagat 251  Q
    |||||||||| |||||||||| |||| ||||| |||||  |||||||||||||| ||||||||||||||  |||||| ||| ||||| | || |||||||    
T  7636343 tgaaagaatcgcaacaatcattttttttcttcccataagccattcgttttaccc-ttttccacaacagaagagtgacaaattcaaacgataccgttagat 7636245  T
Q  252 aaatttcac 260  Q
    |||||||||    
T  7636244 aaatttcac 7636236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 32956690 - 32956927
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||||||| |||||||||||  ||||| | |||||||||||| ||||||  | ||||||||||||| ||||||||||||||  ||||| |||||||    
T  32956690 ttttctttcttcggtacacgtttgagtttttttttagactctagttctcctttctggacataaatctgatgctatcaaaccacccccaatttttataatc 32956789  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    | ||||| | |||||||  |||| |||||||||||||||||||||||||| |||| | | |||||||||| |||||||||| ||| ||| ||||||| ||    
T  32956790 atttaatcagtcaatttataaagttatttcattgaaagaatcacaacaatgatttct-ttttcgcataaaccattcgtttt-cccctttcccacaacgga 32956887  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcac 260  Q
      |||||| ||| ||||| |||||||||| ||||||||||    
T  32956888 tgagtgacaaatccaaacgacactgttaggtaaatttcac 32956927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 8358447 - 8358291
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    ||||||||||||||| |||| |||||||  ||||| |||||||| ||||| ||||||| ||||||||||| |||||||||||||||||| |||||| |||    
T  8358447 atcattttctttctttagtatacgtttgagtttttctctagactttagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttatat 8358348  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat 174  Q
    ||||||||||| | |||||||  |||| ||| |||||||||||||||||||||||||    
T  8358347 aatcacttaatcagtcaatttaaaaagttatctcattgaaagaatcacaacaatcat 8358291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 26633279 - 26633464
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||||||| |||||||| ||  ||||| |||||||||||||| | ||||  | |||||||| |||| |||| |||||||| | |||||||||||||    
T  26633279 ttttctttcttcggtacacgtatgagttttt-tctagactctagttctactttctggacataaatttgatgctataaaaccaccatcaatttgtataatc 26633377  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    ||||||| | |||||||| |||||||||||||||||||||||||||||||||||| | | |||||||||| ||||| |||| ||||||    
T  26633378 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttct-ttttcgcataaaccattcatttttcccttt 26633464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 36 - 202
Target Start/End: Complemental strand, 26282676 - 26282510
Alignment:
Q  36 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 135  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | ||||||||||| | ||||||||||||||  |||||||||||||||||||| | ||||    
T  26282676 tacacgtttgagttttt-tctagactttagttctcctatctgcacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaa 26282578  T
Q  136 tttggaaagctatttcattgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgtttt 202  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||||  ||||||||||| ||||    
T  26282577 tttgaaaagctatttcattgaaagaatcacaacaatcattttttttcttcatataaatcattcatttt 26282510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 81 - 202
Target Start/End: Complemental strand, 773974 - 773852
Alignment:
Q  81 ataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttct 180  Q
    ||||||||||| |||||||| ||||| ||||||||||||| |||| || | |||||||| |||||||||| ||||||||||||||||||||||||||| |    
T  773974 ataaatctgatgctatcaaatcacccctaatttgtataattactttatcagtcaatttgaaaagctattttattgaaagaatcacaacaatcattttttt 773875  T
Q  181 ctt-cgcataaatcattcgtttt 202  Q
     ||  ||||||| ||||||||||    
T  773874 tttgtgcataaaccattcgtttt 773852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 30739038 - 30739227
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||| ||| |||||||||||  ||||| |||||| || | || ||||||  | ||||||||| ||| ||||||||||| | | ||||| |||||||    
T  30739038 ttttcttttttcggtacacgtttgagtttttttctagattccaattctcctttctggacataaatcggatgctatcaaaccatcttcaatttttataatc 30739137  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttc 212  Q
    ||||||| | |||||||| |||| ||||||||| ||||||||||||| |||| ||| || ||||||||||  ||| ||||| |||||||||    
T  30739138 acttaatcagtcaatttgaaaagttatttcattaaaagaatcacaacgatca-tttccttttcgcataaacaattagttttcccctttttc 30739227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 40001788 - 40001694
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca 173  Q
    ||||||||||| | |||||||||||||   |||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  40001788 acataaatctggtactatcaaaccacctccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 40001694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 260
Target Start/End: Complemental strand, 36438494 - 36438264
Alignment:
Q  27 tttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcactta 126  Q
    ||||||||||||| || ||  ||||| ||||| |||||||| | ||||  | |||||||| |||| ||||||||||||  | ||||||||||||||||||    
T  36438494 tttcttcagtacaggtatgagttttt-tctaggctctagttctactttctggacataaatttgatgctatcaaaccactatcaatttgtataatcactta 36438396  T
Q  127 attactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagt 226  Q
    || | |||||||| ||| | ||||||||||||||||||||||||| |||| | | ||| |||||| |||||||||| ||||||| | || ||  || |||    
T  36438395 atcagtcaatttgaaaaaccatttcattgaaagaatcacaacaataatttat-ttttcacataaaccattcgtttt-cccttttcctacgacgtaggagt 36438298  T
Q  227 gacaatgcaaaccacactgttagataaatttcac 260  Q
    |||| | ||||  |||| ||||| ||||||||||    
T  36438297 gacattccaaatgacaccgttaggtaaatttcac 36438264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 41908092 - 41908247
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttcctttta-gtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    |||||||||||| ||||| |||||  ||||| ||| |||||| ||| || ||||  | ||||||||||||| || ||||||||||   |||||||| |||    
T  41908092 ttttctttcttcggtacatgtttgagtttttttcttgactctggttctcattttttggacataaatctgatgctttcaaaccacctccaatttgtacaat 41908191  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    |||||||| | |||||| | |||||| |||||||||||||||||||||||||||||    
T  41908192 cacttaatcagtcaattagaaaagctgtttcattgaaagaatcacaacaatcattt 41908247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 209
Target Start/End: Complemental strand, 40841394 - 40841208
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacc-cttaatttgtataat 120  Q
    |||||||||||||||||| |||||  ||||| ||||||||||| || | ||||| | |||||||| ||||  |||||||||||| | |||||||||||||    
T  40841394 ttttctttcttcagtacatgtttgagttttt-tctagactctaattattctttttggacataaatatgatgttatcaaaccacctcctaatttgtataat 40841296  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
     |||||| || |||||||  |||| ||||  ||| ||||||| |||||| |||||| | | |||||||||| |||||||||| ||||||    
T  40841295 tacttaactaatcaatttataaagttattctattaaaagaattacaacactcatttct-ttttcgcataaaccattcgttttccccttt 40841208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 42311952 - 42312110
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 148  Q
    |||| ||||||||||| || || |||  | |||||||||||||  || ||||| |||||  |||||||||||||||| |||| |||||||| ||||||||    
T  42311952 ttttttctagactctaattctcttttctggacataaatctgatgtta-caaactaccctcgatttgtataatcacttgattagtcaatttgaaaagctat 42312050  T
Q  149 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    |||||| |||||||||||||| |||||| | | ||||| ||||| ||||||||| ||||||    
T  42312051 ttcattaaaagaatcacaacagtcatttat-ttttcgcttaaataattcgttttccccttt 42312110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 9479043 - 9479196
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||| |||||| | ||||||| || |||||| |||| ||||||||| | ||||  | |||||||| |||| ||||||||||||| | ||||||||||||     
T  9479043 ttttttttctttaatacacgtatg-atttttttctaaactctagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtataatt 9479141  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    ||||||| | |||||||  ||| ||||||| ||||||||||||||||||| ||||    
T  9479142 acttaatcagtcaatttaaaaaactatttcgttgaaagaatcacaacaattattt 9479196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 18895489 - 18895361
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    |||||||| ||||  |||||||||||  |||||||||||||||| ||||| | |||||||  |||| |||||||||||||||||||||||||| | |||     
T  18895489 acataaatttgatgttatcaaaccactattaatttgtataatcaattaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaatta-tttc 18895391  T
Q  179 ctcttcgcataaatcattcgttttaccctt 208  Q
    || ||||||||||  ||||||||| |||||    
T  18895390 cttttcgcataaacaattcgttttcccctt 18895361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 25061820 - 25061957
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||||||| ||||||||||  |||||| |  ||||||||||| | ||||| | ||||||||||||| ||||||||| |  || |||||||| ||||    
T  25061820 ttttctttcttcggtacacgttttaattttttt--agactctagttcttctttttggacataaatctgatgctatcaaactattctcaatttgtacaatc 25061917  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaa 161  Q
    |||| || | | |||||| |||||||||||||||||||||    
T  25061918 actttatcagttaatttgaaaagctatttcattgaaagaa 25061957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 40738113 - 40737994
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 148  Q
    |||| |||| ||||||||| | |||||   |||||||| |||| ||||||||||||| | |||||||||||| ||||||| | |||||||  ||||||||    
T  40738113 ttttttctaaactctagttctacttttttgacataaatttgatgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaagctat 40738014  T
Q  149 ttcattgaaagaatcacaac 168  Q
    || |||||||||||||||||    
T  40738013 tttattgaaagaatcacaac 40737994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 3799819 - 3799730
Alignment:
Q  112 ttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttta 203  Q
    ||||||||||| ||||| |  |||||| | ||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||    
T  3799819 ttgtataatcatttaataagccaattttggaagctatttcattgaaagaatcacaacaatcatttttttc--cgcataaaccattcgtttta 3799730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 1365956 - 1366110
Alignment:
Q  54 tctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcat 153  Q
    |||||||| ||||| |||| |  | |||||||| || | ||||||||||||    |||| ||||||| ||||||| | |||||||| |||| ||||||||    
T  1365956 tctagactttagttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaatttgaaaagttatttcat 1366055  T
Q  154 tgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
     |||||||||||||||||||||| | | ||| |||||| |||||||||| ||||||    
T  1366056 agaaagaatcacaacaatcatttct-ttttcacataaaccattcgttttccccttt 1366110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 264
Target Start/End: Complemental strand, 41852446 - 41852208
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||| |||| | ||||||||||  ||||| |||||||| ||||| |||||| || |  ||||| || | |||| ||||||| |  ||||| |||||||    
T  41852446 ttttctctctttaatacacgtttgggttttt-tctagactttagttctcctttcaggatgtaaatatggtgctataaaaccactcc-aattt-tataatc 41852350  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    ||||| | | |||||||  | || |||||||||||||||||| ||||| |||||| | | || |||||||| |||| |||| ||| ||||||||||| ||    
T  41852349 acttactcagtcaatttaaagagttatttcattgaaagaatcgcaacactcatttct-tttttgcataaataattcatttt-ccccttttccacaacgga 41852252  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcacatct 264  Q
    | |||||| ||| ||||| |||| ||||||||||||||||||||    
T  41852251 ggagtgacaaattcaaacgacaccgttagataaatttcacatct 41852208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 209
Target Start/End: Original strand, 7366659 - 7366788
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    |||||||| ||||  ||| |||||||| | |||||| ||||| ||||||||  |||||||| ||| |||||| |||||||||||||||||||| |||| |    
T  7366659 acataaatttgatgatattaaaccaccatcaatttgaataattacttaatttgtcaatttgaaaaactattttattgaaagaatcacaacaattatttct 7366758  T
Q  179 ctcttcgcataaatcattcgttttacccttt 209  Q
     | |||||||||| ||||| |||| ||||||    
T  7366759 -ttttcgcataaaccattcattttccccttt 7366788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 44876217 - 44876126
Alignment:
Q  109 aatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 202  Q
    ||||| || ||||| ||||| | ||||||| ||||||||||||||| ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  44876217 aatttttaaaatcatttaatcagtcaatttagaaagctatttcattaaaagaatcacaacaatcatttttttc--cgcataaaccattcgtttt 44876126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 12251539 - 12251466
Alignment:
Q  19 tcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcc 93  Q
    |||||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||    
T  12251539 tcattttctttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatcc 12251466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 25610090 - 25610135
Alignment:
Q  131 ctcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||    
T  25610090 ctcaatttgaaaagtcatttcattgaaagaatcacaacaatcattt 25610135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 38525100 - 38525147
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagtttt 69  Q
    ||||||||||| ||||||||||||  ||||| ||||||||||||||||    
T  38525100 ttttctttctttagtacacgtttgagtttttttctagactctagtttt 38525147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 140; Significance: 4e-73; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 34 - 272
Target Start/End: Original strand, 16637 - 16875
Alignment:
Q  34 agtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactc 133  Q
    ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| | ||    
T  16637 agtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtc 16736  T
Q  134 aatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aat 232  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||| |||||||||||| |||||||||||||| ||||||||||||||| ||| || |||    
T  16737 aatttgaaaagctatttcattgaaagaatcacaacgatcatatttttcttcgcataaaccattcgttttaccc-ttttccacaacagaggagtaacaaat 16835  T
Q  233 gcaaaccacactgttagataaatttcacatcttttactta 272  Q
     ||||| |||| |||||||||||||||| ||||| |||||    
T  16836 ccaaacgacaccgttagataaatttcacctctttcactta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 4e-73; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 13474541 - 13474795
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    |||||||| |||||| ||||||||||||  ||||| |||| ||||||||| || |||| ||||||||||| |||||||||||||||||| ||||||||||    
T  13474541 atcattttttttctttagtacacgtttgagtttttttctaaactctagttctcttttttgtacataaatcggatcctatcaaaccacccctaatttgtat 13474640  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | |||||||| |||| | ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  13474641 aatcacttaatcagtcaatttgaaaagttgtttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 13474739  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||||| |||||| ||| ||||| |||| ||||||||||||| || ||||| |||||    
T  13474740 cagaggagtgacaaatccaaacgacaccgttagataaattttacctctttcactta 13474795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 13656119 - 13656375
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcct---atcaaaccacccttaatttg 114  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| ||||||   |  |||||| || |||||||    
T  13656119 atcattttctttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatcctaaaaaaaaaccatccctaatttg 13656217  T
Q  115 tataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttcca 214  Q
    |||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| |    
T  13656218 tataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttcta 13656316  T
Q  215 caacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |||||||| |||| | ||| ||||| |||| |||||||||||||||| |||||||||||    
T  13656317 caacagaggagtgtcaaattcaaacgacaccgttagataaatttcacctcttttactta 13656375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 19 - 272
Target Start/End: Original strand, 12661216 - 12661474
Alignment:
Q  19 tcattttctttcttcagtacacgtttgtatttttgtctagactctagttttcctttta------gtacataaatctgatcctatcaaaccacccttaatt 112  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||||||||||  ||||       ||| ||||||| ||| |||||||||||||  |||||    
T  12661216 tcattttctttctttagtacacgtttgagttttt-tctagactctagtttttttttttttttttgtatataaatcggattctatcaaaccacctctaatt 12661314  T
Q  113 tgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttc 212  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| |||||||||||||| |||||    
T  12661315 tgtataatcacttaaccagtcaatttggaaagctatttcattgaaagaatcacaacaatattttttttcttcgcataaaccattcgttttaccc-ttttc 12661413  T
Q  213 cacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    |||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||| |||||    
T  12661414 cacaacagaggagtgacaaatccaaacgacactgttagataaatttcacatctttcactta 12661474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 22 - 272
Target Start/End: Complemental strand, 26377924 - 26377672
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 120  Q
    ||||||||||| ||||||||||||  ||||| | ||||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  26377924 ttttctttctttagtacacgtttgagttttttttctagactctagttctcctttttgtacataaatcagatcctatcaaaccacccctaatttgtataat 26377825  T
Q  121 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttct-cttcgcataaatcattcgttttaccctttttccacaaca 219  Q
    |||||| | | ||||| ||  ||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||| ||||||     
T  26377824 cacttattcagtcaatgtgagaagctatttcattgaaagaatcacaacaatcatttttttccttcgcataaaccattcgtttta-ccttttttcacaact 26377726  T
Q  220 gagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    ||| |||||| ||| ||||| |||| |||||||||||||||  ||||| |||||    
T  26377725 gaggagtgacaaatccaaacgacaccgttagataaatttcatctctttcactta 26377672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 56 - 272
Target Start/End: Original strand, 13423813 - 13424029
Alignment:
Q  56 tagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattg 155  Q
    |||||||||||| || |||| ||||||||||| |||||||||||||||  | ||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  13423813 tagactctagttctcttttttgtacataaatcggatcctatcaaaccattcctaatttgtataatcacttaatcaatcaatttagaaagctatttcattg 13423912  T
Q  156 aaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaa 254  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||| |||| |||||| |||  |||| |||| ||| ||||||    
T  13423913 aaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaatagaggagtgacaaatctaaacgacaccgttcgataaa 13424011  T
Q  255 tttcacatcttttactta 272  Q
    |||||| ||||| |||||    
T  13424012 tttcacctctttcactta 13424029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 56 - 272
Target Start/End: Complemental strand, 19099429 - 19099213
Alignment:
Q  56 tagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattg 155  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||| | |||||||  |||||||||||||||    
T  19099429 tagactatagttctcctttttgtacataaatctgatcctatcaaaccatccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattg 19099330  T
Q  156 aaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaa 254  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||  |  |||||||||| ||| |||||| ||| ||||| |||| ||||||||||    
T  19099329 aaagaatcacaacaatcatttttttcttcgcataaaccattcgtttta-tcactttccacaaccgagaagtgacaaatccaaacgacaccgttagataaa 19099231  T
Q  255 tttcacatcttttactta 272  Q
    |||||| ||||| |||||    
T  19099230 tttcacctctttcactta 19099213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 36718690 - 36718526
Alignment:
Q  48 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 147  Q
    ||||| |||||||||||||| ||||||| |||||| |||| |||||||||||||||||| ||||||||||||||| ||||| | |||||||| |||| ||    
T  36718690 tttttttctagactctagttctcctttttgtacatgaatcggatcctatcaaaccacccctaatttgtataatcatttaatcagtcaatttgtaaagtta 36718591  T
Q  148 tttcattgaaagaatcacaacaatca-tttttctcttcgcataaatcattcgttttacccttttt 211  Q
    ||| ||||||||||||||||| || | ||||| |||||||||||| ||||||||||||| |||||    
T  36718590 ttttattgaaagaatcacaaccataattttttttcttcgcataaaccattcgttttaccattttt 36718526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 138086 - 138245
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 148  Q
    |||| |||||||||||||| | ||||| | |||||||| |||| ||||||||||||| | |||||||||||||||||||| | |||||||| ||||||||    
T  138086 ttttttctagactctagttctacttttcggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctat 138185  T
Q  149 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    |||||||||| |||||||||||| |||||| | | |||||||| |||||||||| ||||||    
T  138186 ttcattgaaataatcacaacaattattttt-tttccgcataaaccattcgttttccccttt 138245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 36 - 209
Target Start/End: Original strand, 29156120 - 29156291
Alignment:
Q  36 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 135  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | ||||||||||| | |||||||||||||| ||||||||||||||||||||| | ||||    
T  29156120 tacacgtttgagttttt-tctagactatagttatcctatctgaacataaatctggtactatcaaaccacccctaatttgtataatcacttaatcagtcaa 29156218  T
Q  136 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    |||  |||| ||||||||||||||||||||||||||||||| | | |||  ||||| |||||||||| ||||||    
T  29156219 tttaaaaagttatttcattgaaagaatcacaacaatcatttct-ttttcatataaaccattcgttttccccttt 29156291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 36 - 209
Target Start/End: Original strand, 43511548 - 43511719
Alignment:
Q  36 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 135  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | ||||||||||| | ||||||||||||||  |||||||||||||||||||| | ||||    
T  43511548 tacacgtttgagttttt-tctagactttagttctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaa 43511646  T
Q  136 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    |||| ||||||||||||| |||||||||||||||||||||| | | |||  ||||| |||||||||| ||||||    
T  43511647 tttgaaaagctatttcatggaaagaatcacaacaatcatttct-ttttcatataaaccattcgtttttcccttt 43511719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 48 - 272
Target Start/End: Original strand, 26311947 - 26312153
Alignment:
Q  48 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 147  Q
    ||||| |||||| ||||||| | ||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||                       
T  26311947 tttttttctagattctagttcttctttttgtacataaatcggatcctatcaaaccacccataatttgtataatcacttaat------------------- 26312027  T
Q  148 tttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag---agtagtgac-aatgcaaaccacac 243  Q
       |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| |||||||||||||   || |||||| ||| ||||| ||||    
T  26312028 ---cattgaaagaatcacaacaatcatttttttcttcgtataaaccattcgttttaccccttttccacaacagatcaggagtgacaaatccaaacgacac 26312124  T
Q  244 tgttagataaatttcacatcttttactta 272  Q
     |||||||||||||||| ||||| |||||    
T  26312125 cgttagataaatttcacctctttcactta 26312153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 79 - 209
Target Start/End: Original strand, 5829357 - 5829484
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    ||||||||||| | ||||||||||| ||| |||||||||||||||||||| | |||||||  |||||||||||||| ||||||||||||||||||||| |    
T  5829357 acataaatctggtactatcaaaccaacctcaatttgtataatcacttaatcagtcaattt--aaagctatttcattaaaagaatcacaacaatcatttct 5829454  T
Q  179 ctcttcgcataaatcattcgttttacccttt 209  Q
     | ||| |||||| |||||||||| ||||||    
T  5829455 -ttttcacataaaccattcgtttttcccttt 5829484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 202
Target Start/End: Complemental strand, 4734704 - 4734552
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 148  Q
    |||| |||||||| ||||| |||| |  | ||||||||||| | |||||||||||||   ||||||||||||| ||| || |||||||||| ||| ||||    
T  4734704 ttttttctagactttagttctcctatctggacataaatctggtactatcaaaccaccaccaatttgtataatcccttgatcactcaatttgaaaatctat 4734605  T
Q  149 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 202  Q
    |||||||||||||||||||||||||||| | | ||| |||||| ||||||||||    
T  4734604 ttcattgaaagaatcacaacaatcatttct-ttttcacataaaccattcgtttt 4734552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 209
Target Start/End: Complemental strand, 10591407 - 10591236
Alignment:
Q  36 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 135  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | |||||||| || | ||||||||||||||  |||||||||||||||||||| | | ||    
T  10591407 tacacgtttgagttttt-tctagactttagttctcctatctgaacataaatatggtactatcaaaccacccccaatttgtataatcacttaatcagttaa 10591309  T
Q  136 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    |||| |||| ||||||||||||||||||||||||||||||| | | ||| || |||||||||||| | ||||||    
T  10591308 tttgaaaagttatttcattgaaagaatcacaacaatcatttat-ttttcacaaaaatcattcgttatccccttt 10591236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 17514026 - 17513899
Alignment:
Q  81 ataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttct 180  Q
    ||||||||| | ||| ||||||||||  |||||||||||||||||||| | |||||||| |||| ||||||| ||||||||||||||||||||||| | |    
T  17514026 ataaatctggtactaacaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagttatttcactgaaagaatcacaacaatcatttct-t 17513928  T
Q  181 cttcgcataaatcattcgttttacccttt 209  Q
     ||| |||||| |||||||||| ||||||    
T  17513927 tttcacataaaccattcgtttttcccttt 17513899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 27351265 - 27351404
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||||||||||| |||||||   |||| |||||||||||||| ||||||  | |||||||| || | |||||||||||||   ||||||||||| |    
T  27351265 ttttctttcttcagtatacgtttgagatttt-tctagactctagttctcctttctgaacataaatttggtgctatcaaaccacctccaatttgtataacc 27351363  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaat 162  Q
    ||||||| | ||||||||||||| |||||||||||||||||    
T  27351364 acttaatcagtcaatttggaaagttatttcattgaaagaat 27351404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 42291973 - 42291844
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 178  Q
    |||||||| || | |||||||| ||||   |||||||||||||||||||| | |||||||| ||| |||||||||||||||||||||||||||||||| |    
T  42291973 acataaatttggtactatcaaatcaccaccaatttgtataatcacttaatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatcatttct 42291874  T
Q  179 ctcttcgcataaatcattcgttttacccttt 209  Q
     | ||| |||||| |||||||||| ||||||    
T  42291873 -ttttcacataaaccattcgttttccccttt 42291844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 20975957 - 20976054
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    |||||||| || | |||||||||||||   |||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  20975957 acataaatttggtactatcaaaccaccaccaatttgtataatcatttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattt 20976054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 8398896 - 8398989
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgt 115  Q
    ||||||||||| ||||||||||||  ||||| | |||||||||||| || |||| ||||||||||| |||||||||||||||||| ||||||||    
T  8398896 ttttctttctttagtacacgtttgagtttttttttagactctagttctcatttttgtacataaatcggatcctatcaaaccacccctaatttgt 8398989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 54 - 202
Target Start/End: Original strand, 10033493 - 10033641
Alignment:
Q  54 tctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaat-tactcaatttggaaagctatttca 152  Q
    |||||||||||||| | ||||  |||||||||| |||| |||||||||| || | |||||||||||||||| | |  | |||||||| |||||||||| |    
T  10033493 tctagactctagttctactttctgtacataaatttgatgctatcaaacccccatcaatttgtataatcactgattaaagtcaatttgaaaagctatttta 10033592  T
Q  153 ttgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 202  Q
    ||||||||||||||| ||| |||| | | |||||||||| ||||||||||    
T  10033593 ttgaaagaatcacaataattatttct-ttttcgcataaaccattcgtttt 10033641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 49 - 260
Target Start/End: Original strand, 40956255 - 40956465
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 148  Q
    |||| |||||||||||||| ||||||  | ||||||||||||| | |||||||   |   |||||||||||||||||||| | | |||||| ||| ||||    
T  40956255 ttttttctagactctagttctcctttgtggacataaatctgatgcaatcaaacattctccaatttgtataatcacttaatcatttaatttgaaaaactat 40956354  T
Q  149 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgacaa-tgcaaaccacactgtt 247  Q
    |||||| ||||||||||||||||||||| | | || ||||| | |||||||||| ||||||  ||||||  ||  |||||||| | ||||| || | |||    
T  40956355 ttcattaaaagaatcacaacaatcatttctttttt-gcatacaccattcgttttcccctttc-ccacaatggaagagtgacaaatccaaacgacgccgtt 40956452  T
Q  248 agataaatttcac 260  Q
    |||||||||||||    
T  40956453 agataaatttcac 40956465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 164
Target Start/End: Original strand, 23069136 - 23069277
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    ||||||||||||  ||||||||||| ||||| | || |||||| || ||||||  | |||||||| |||| ||| ||||||||||  |||||||||||||    
T  23069136 ttttctttcttcgttacacgtttgtgttttttt-tatactctaattctcctttctgaacataaatatgatgctagcaaaccacccccaatttgtataatc 23069234  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatca 164  Q
     |||||| | || ||||||||||||||||||||  ||||||||    
T  23069235 ccttaatcattcgatttggaaagctatttcattacaagaatca 23069277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 18873425 - 18873526
Alignment:
Q  79 acataaatctgatcctatcaaaccacc----cttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat 174  Q
    |||||||| |||| |||||||||||||     ||||||||||||| |||||||| |  ||||||| ||||||||||||||||||||||||||||||| ||    
T  18873425 acataaatttgatgctatcaaaccaccatcaattaatttgtataaccacttaatcagccaatttgaaaagctatttcattgaaagaatcacaacaattat 18873524  T
Q  175 tt 176  Q
    ||    
T  18873525 tt 18873526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 79 - 209
Target Start/End: Original strand, 17325816 - 17325946
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaag-ctatttcattgaaagaatcacaacaatcatttt 177  Q
    |||||||| |||| |||| |||| ||| |  ||||| ||||||||||||| | |||||||| |||  ||||||||||||||||||||||||||| ||||     
T  17325816 acataaatttgatgctattaaactaccatcgatttgaataatcacttaatcagtcaatttgaaaaaactatttcattgaaagaatcacaacaattatttc 17325915  T
Q  178 tctcttcgcataaatcattcgttttacccttt 209  Q
    | | |||||||||| |||||| ||| ||||||    
T  17325916 t-ttttcgcataaaccattcgctttccccttt 17325946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 209
Target Start/End: Complemental strand, 7390460 - 7390363
Alignment:
Q  111 tttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    |||||||||||||||||| | |||||||  |||| |||||||| ||||||||||| ||||| |||| | | |||||||||| |||||||||| ||||||    
T  7390460 tttgtataatcacttaatcagtcaatttaaaaagttatttcatcgaaagaatcacgacaattatttct-ttttcgcataaaccattcgttttccccttt 7390363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 33281677 - 33281743
Alignment:
Q  110 atttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    ||||||||||||||||||||| |||||||  |||| |||||||||||||||||| ||| ||||||||    
T  33281677 atttgtataatcacttaattagtcaatttaaaaagttatttcattgaaagaatcccaataatcattt 33281743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 209
Target Start/End: Complemental strand, 3349784 - 3349692
Alignment:
Q  116 ataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 209  Q
    ||||| ||||||| | |||||||| ||||||||||||| |||||||||||||||||||||| | | ||| |||||| | |||||||| ||||||    
T  3349784 ataatgacttaatcagtcaatttgaaaagctatttcatagaaagaatcacaacaatcatttct-ttttcacataaaccgttcgttttccccttt 3349692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 202
Target Start/End: Original strand, 40779134 - 40779286
Alignment:
Q  49 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 148  Q
    |||| |||||| ||||||| ||||||  | |||||||| ||||  |||||||| | ||  |||||||||||||  ||||| | |||||||| ||| ||||    
T  40779134 ttttttctagagtctagttctcctttctgaacataaatttgatgttatcaaactatccccaatttgtataatcgtttaataagtcaatttgaaaaactat 40779233  T
Q  149 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 202  Q
    | ||||| | |||||||||||||||||| | | |||| ||||| ||||||||||    
T  40779234 tccattg-aggaatcacaacaatcatttcttttttcgtataaaccattcgtttt 40779286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 931382 - 931469
Alignment:
Q  109 aatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 202  Q
    |||||||||||||||||||| | ||||||| |||||||     |||||||||||||||| |||||||| | | |||||||||| ||||||||||    
T  931382 aatttgtataatcacttaatcagtcaatttagaaagct-----attgaaagaatcacaataatcatttct-ttttcgcataaaccattcgtttt 931469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 16515496 - 16515593
Alignment:
Q  79 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 176  Q
    |||||||| |||| |||| ||| |||| | |||||  ||||||||||||| | |||||||| |||  ||||| |||||||||||||||||||| ||||    
T  16515496 acataaatttgatgctattaaaacaccatcaattttaataatcacttaatcaatcaatttgaaaaattattttattgaaagaatcacaacaattattt 16515593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 154
Target Start/End: Complemental strand, 8379669 - 8379538
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||||||||||| |||||| ||||  ||||| ||||||||||  || || |||  | |||||||| ||||  ||||||| ||||| |||||||||||||     
T  8379669 ttttctttcttcggtacacatttgagttttt-tctagactctcattctcatttatggacataaatatgatgttatcaaatcacccctaatttgtataatt 8379571  T
Q  122 acttaattactcaatttggaaagctatttcatt 154  Q
    ||||||| | | ||||| ||||| |||||||||    
T  8379570 acttaatcaattaatttcgaaagttatttcatt 8379538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 34 - 272
Target Start/End: Complemental strand, 17270 - 17031
Alignment:
Q  34 agtacacgtttgtat-ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattact 132  Q
    |||||||||||| || |||| |||||||||||||| || |||| ||| ||||||| |||||||||||| ||||| ||||||||||||||||||||| | |    
T  17270 agtacacgtttgaatgttttttctagactctagttctcatttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagt 17171  T
Q  133 caatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aa 231  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||| ||||||||||| || |||||||||||| || |||||| ||    
T  17170 caatttggaaagctatttcgttgaaagaatcacaacaatcattttcttcttcgcataaaccattcgtttta-ccattttccacaacaaagaagtgacaaa 17072  T
Q  232 tgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    | ||||| |||| ||| |||||||||||| ||||| |||||    
T  17071 ttcaaacgacaccgttggataaatttcacctctttcactta 17031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 22 - 266
Target Start/End: Original strand, 988 - 1220
Alignment:
Q  22 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 121  Q
    |||| |||||| | |||| |||||  ||||| |||||||||||||| ||||||| || |||||||| |||||||||||||||||| ||||||||||||||    
T  988 ttttatttctttattacatgtttgagtttttttctagactctagttctcctttttgtgcataaatcggatcctatcaaaccacccctaatttgtataatc 1087  T
Q  122 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 221  Q
    |            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| |    
T  1088 a------------atttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaacata 1174  T
Q  222 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttt 266  Q
    | |||||| ||| ||||| |||| |||||||||||||||| |||||    
T  1175 ggagtgacaaatccaaacgacaccgttagataaatttcacctcttt 1220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 46326 - 46086
Alignment:
Q  18 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 117  Q
    |||||||| ||||||| |||||| |||| |||||| |||||||||||||| || ||||  |||||| |||||||||||||||||||||| ||||||| ||    
T  46326 atcattttatttcttcggtacacatttgaatttttttctagactctagttctcatttttatacatatatctgatcctatcaaaccacccataatttggat 46227  T
Q  118 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 217  Q
    ||||||||||| | |||||||||||  |||||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||| |||||| |||||    
T  46226 aatcacttaatcagtcaatttggaagtctatttcattgaaataatcacaacaatcattttt-tcttcacataaaccattcgttttactcttttt-cacaa 46129  T
Q  218 cagagtagtgac-aatgcaaaccacactgttagataaatttcac 260  Q
     |||| |||||| ||| ||||| |||| ||| | ||||||||||    
T  46128 -agaggagtgacaaatccaaacgacaccgttggctaaatttcac 46086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 132 - 272
Target Start/End: Complemental strand, 22844 - 22704
Alignment:
Q  132 tcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-a 230  Q
    ||||| || ||| ||||||||||||||||||||||| ||| |||||| |||||||||||| |||||||||||||| |||||||||||| || |||||| |    
T  22844 tcaatatgaaaaactatttcattgaaagaatcacaataattatttttttcttcgcataaaccattcgttttaccc-ttttccacaacataggagtgacaa 22746  T
Q  231 atgcaaaccacactgttagataaatttcacatcttttactta 272  Q
    || ||||| |||| |||||||||||||||| ||||| |||||    
T  22745 attcaaacgacaccgttagataaatttcacctctttcactta 22704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 55 - 178
Target Start/End: Complemental strand, 8511 - 8388
Alignment:
Q  55 ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcatt 154  Q
    ||||||||||| ||||||||  | ||||||| || || |||||||||||||| ||||||||||||||| ||||| | ||||||| |||| ||||||||||    
T  8511 ctagactctagatttcctttctggacataaaccttatgctatcaaaccacccataatttgtataatcaattaatcagtcaatttcgaaaactatttcatt 8412  T
Q  155 gaaagaatcacaacaatcattttt 178  Q
    ||||||||||||| ||| ||||||    
T  8411 gaaagaatcacaaaaattattttt 8388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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