View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14817_high_9 (Length: 265)
Name: NF14817_high_9
Description: NF14817
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14817_high_9 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 13 - 265
Target Start/End: Original strand, 40190312 - 40190565
Alignment:
| Q |
13 |
aaaatcatcaaacttggttcctattagaatgggaattgcagtctgcaattgaatgtaacat-ggtcatcacaaattccatataacataataatacatcta |
111 |
Q |
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| T |
40190312 |
aaaatcatcaaacttggttcctattagaatgggaattgcagtctgcaattgaatgtaacattggtcatcacaaattccatataacataataatacatcta |
40190411 |
T |
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| Q |
112 |
attagggataatatttgtaagcatacatcaacttataaatttaatgagctcctatctctatcacatgttcctgaaaaattaatgtcacttaccacttatc |
211 |
Q |
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| T |
40190412 |
attagggataatatttgtaagcatacatcaacttataaatttaatgagctcctatctctatcacatgttcctgaaaaattaatgtcacttaccacttatc |
40190511 |
T |
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| Q |
212 |
agccataaaagctactaaagtttcatcactataataacgtactagtcactctaa |
265 |
Q |
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| T |
40190512 |
agccataaaagctactaaagtttcatcactataataacgtactagtaactctaa |
40190565 |
T |
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